Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038309.01.T01 | XP_013456565.1 | 98.592 | 142 | 2 | 0 | 30 | 171 | 1 | 142 | 1.99E-90 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038309.01.T01 | F4IF36 | 80.392 | 102 | 18 | 1 | 331 | 432 | 869 | 968 | 1.29E-45 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038309.01.T01 | I3SDS4 | 98.592 | 142 | 2 | 0 | 30 | 171 | 1 | 142 | 9.49e-91 | 285 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048761.01 | MsG0780038309.01 | 0.833897 | 4.096678e-56 | 4.783540e-53 |
| MsG0080049069.01 | MsG0780038309.01 | -0.833453 | 5.286656e-56 | 6.091095e-53 |
| MsG0080049147.01 | MsG0780038309.01 | -0.810804 | 9.609378e-51 | 5.849226e-48 |
| MsG0180000010.01 | MsG0780038309.01 | 0.821011 | 5.064787e-53 | 4.072323e-50 |
| MsG0180000240.01 | MsG0780038309.01 | 0.836143 | 1.111895e-56 | 1.388936e-53 |
| MsG0180000355.01 | MsG0780038309.01 | -0.829963 | 3.835125e-55 | 3.985592e-52 |
| MsG0180000544.01 | MsG0780038309.01 | 0.866955 | 1.952658e-65 | 6.702432e-62 |
| MsG0180002973.01 | MsG0780038309.01 | -0.803137 | 4.024304e-49 | 2.006672e-46 |
| MsG0180002977.01 | MsG0780038309.01 | 0.800824 | 1.202035e-48 | 5.652008e-46 |
| MsG0180003124.01 | MsG0780038309.01 | -0.821986 | 3.016308e-53 | 2.492166e-50 |
| MsG0180003246.01 | MsG0780038309.01 | 0.852966 | 3.262708e-61 | 6.937762e-58 |
| MsG0180003309.01 | MsG0780038309.01 | 0.849534 | 3.040441e-60 | 5.781264e-57 |
| MsG0180003697.01 | MsG0780038309.01 | -0.813622 | 2.332178e-51 | 1.530633e-48 |
| MsG0180003767.01 | MsG0780038309.01 | 0.847686 | 9.881713e-60 | 1.770574e-56 |
| MsG0180004025.01 | MsG0780038309.01 | -0.808866 | 2.508500e-50 | 1.450484e-47 |
| MsG0180004605.01 | MsG0780038309.01 | 0.846459 | 2.144027e-59 | 3.693189e-56 |
| MsG0180005303.01 | MsG0780038309.01 | 0.807443 | 5.042552e-50 | 2.808941e-47 |
| MsG0180005515.01 | MsG0780038309.01 | 0.809370 | 1.956958e-50 | 1.146933e-47 |
| MsG0180005676.01 | MsG0780038309.01 | 0.821268 | 4.419325e-53 | 3.578175e-50 |
| MsG0180006096.01 | MsG0780038309.01 | -0.802563 | 5.286918e-49 | 2.597971e-46 |
| MsG0180006144.01 | MsG0780038309.01 | -0.812916 | 3.331351e-51 | 2.144914e-48 |
| MsG0280006306.01 | MsG0780038309.01 | 0.850802 | 1.341400e-60 | 2.659173e-57 |
| MsG0280010604.01 | MsG0780038309.01 | 0.828612 | 8.161658e-55 | 8.153509e-52 |
| MsG0280011059.01 | MsG0780038309.01 | 0.917294 | 6.326030e-86 | 1.813838e-81 |
| MsG0280011304.01 | MsG0780038309.01 | -0.817594 | 3.041812e-52 | 2.224621e-49 |
| MsG0380012005.01 | MsG0780038309.01 | -0.822162 | 2.745761e-53 | 2.280023e-50 |
| MsG0380012394.01 | MsG0780038309.01 | -0.803089 | 4.116773e-49 | 2.050209e-46 |
| MsG0380012661.01 | MsG0780038309.01 | 0.804348 | 2.255057e-49 | 1.160030e-46 |
| MsG0380013794.01 | MsG0780038309.01 | 0.822652 | 2.112316e-53 | 1.778890e-50 |
| MsG0380014225.01 | MsG0780038309.01 | 0.824437 | 8.077053e-54 | 7.153832e-51 |
| MsG0380014401.01 | MsG0780038309.01 | 0.826928 | 2.072441e-54 | 1.971260e-51 |
| MsG0680030992.01 | MsG0780038309.01 | -0.812774 | 3.578985e-51 | 2.295713e-48 |
| MsG0680031333.01 | MsG0780038309.01 | 0.842448 | 2.569723e-58 | 3.897961e-55 |
| MsG0680031967.01 | MsG0780038309.01 | -0.801814 | 7.538265e-49 | 3.634473e-46 |
| MsG0680032204.01 | MsG0780038309.01 | -0.832198 | 1.084048e-55 | 1.203023e-52 |
| MsG0680032510.01 | MsG0780038309.01 | 0.841958 | 3.464101e-58 | 5.173507e-55 |
| MsG0680035311.01 | MsG0780038309.01 | 0.826487 | 2.641139e-54 | 2.480242e-51 |
| MsG0680035465.01 | MsG0780038309.01 | 0.804272 | 2.339696e-49 | 1.201172e-46 |
| MsG0480018911.01 | MsG0780038309.01 | -0.841570 | 4.386137e-58 | 6.471587e-55 |
| MsG0480019126.01 | MsG0780038309.01 | -0.800803 | 1.214101e-48 | 5.705690e-46 |
| MsG0480019163.01 | MsG0780038309.01 | 0.844720 | 6.346448e-59 | 1.033765e-55 |
| MsG0480019380.01 | MsG0780038309.01 | -0.805335 | 1.403187e-49 | 7.403833e-47 |
| MsG0480019689.01 | MsG0780038309.01 | 0.852360 | 4.858111e-61 | 1.012600e-57 |
| MsG0480020935.01 | MsG0780038309.01 | 0.808856 | 2.521486e-50 | 1.457560e-47 |
| MsG0480021153.01 | MsG0780038309.01 | 0.807468 | 4.980890e-50 | 2.776567e-47 |
| MsG0480021201.01 | MsG0780038309.01 | -0.828369 | 9.342664e-55 | 9.267436e-52 |
| MsG0480021280.01 | MsG0780038309.01 | -0.808430 | 3.109804e-50 | 1.777777e-47 |
| MsG0480021768.01 | MsG0780038309.01 | -0.815603 | 8.494306e-52 | 5.883322e-49 |
| MsG0480021776.01 | MsG0780038309.01 | 0.918584 | 1.301688e-86 | 3.993155e-82 |
| MsG0480021836.01 | MsG0780038309.01 | 0.800243 | 1.579484e-48 | 7.318030e-46 |
| MsG0480021845.01 | MsG0780038309.01 | 0.809541 | 1.798107e-50 | 1.058628e-47 |
| MsG0480022340.01 | MsG0780038309.01 | 0.818210 | 2.207597e-52 | 1.642053e-49 |
| MsG0480022781.01 | MsG0780038309.01 | 0.829953 | 3.856876e-55 | 4.006972e-52 |
| MsG0480022872.01 | MsG0780038309.01 | 0.831414 | 1.691988e-55 | 1.834733e-52 |
| MsG0480022956.01 | MsG0780038309.01 | 0.819981 | 8.729976e-53 | 6.820860e-50 |
| MsG0480023073.01 | MsG0780038309.01 | -0.825401 | 4.783700e-54 | 4.355622e-51 |
| MsG0480023162.01 | MsG0780038309.01 | -0.828209 | 1.021146e-54 | 1.008262e-51 |
| MsG0480023261.01 | MsG0780038309.01 | -0.806991 | 6.286831e-50 | 3.461106e-47 |
| MsG0480023652.01 | MsG0780038309.01 | -0.814816 | 1.270704e-51 | 8.613652e-49 |
| MsG0480023814.01 | MsG0780038309.01 | -0.821246 | 4.471657e-53 | 3.618473e-50 |
| MsG0480023936.01 | MsG0780038309.01 | 0.830402 | 2.997643e-55 | 3.154887e-52 |
| MsG0480023974.01 | MsG0780038309.01 | 0.830575 | 2.718092e-55 | 2.875106e-52 |
| MsG0580024790.01 | MsG0780038309.01 | 0.802797 | 4.731213e-49 | 2.338945e-46 |
| MsG0580024928.01 | MsG0780038309.01 | 0.860008 | 2.786839e-63 | 7.506310e-60 |
| MsG0580025182.01 | MsG0780038309.01 | 0.825512 | 4.501320e-54 | 4.111386e-51 |
| MsG0580025369.01 | MsG0780038309.01 | 0.802676 | 5.011048e-49 | 2.469525e-46 |
| MsG0580025627.01 | MsG0780038309.01 | -0.826911 | 2.091689e-54 | 1.988585e-51 |
| MsG0380015066.01 | MsG0780038309.01 | 0.864359 | 1.287010e-64 | 4.029535e-61 |
| MsG0380015533.01 | MsG0780038309.01 | -0.809639 | 1.712823e-50 | 1.011118e-47 |
| MsG0380015849.01 | MsG0780038309.01 | 0.832376 | 9.791194e-56 | 1.092368e-52 |
| MsG0380016191.01 | MsG0780038309.01 | 0.883692 | 3.619151e-71 | 2.318856e-67 |
| MsG0380016347.01 | MsG0780038309.01 | 0.874203 | 8.113793e-68 | 3.620241e-64 |
| MsG0380016671.01 | MsG0780038309.01 | -0.806933 | 6.466753e-50 | 3.554900e-47 |
| MsG0380016820.01 | MsG0780038309.01 | -0.828413 | 9.116621e-55 | 9.055316e-52 |
| MsG0380016828.01 | MsG0780038309.01 | 0.849851 | 2.479201e-60 | 4.763710e-57 |
| MsG0380017023.01 | MsG0780038309.01 | -0.822236 | 2.638805e-53 | 2.195981e-50 |
| MsG0380017085.01 | MsG0780038309.01 | -0.823320 | 1.476216e-53 | 1.266765e-50 |
| MsG0380017178.01 | MsG0780038309.01 | 0.843612 | 1.258961e-58 | 1.980782e-55 |
| MsG0380017263.01 | MsG0780038309.01 | 0.866753 | 2.263703e-65 | 7.715932e-62 |
| MsG0380017776.01 | MsG0780038309.01 | 0.815515 | 8.888059e-52 | 6.141015e-49 |
| MsG0380017878.01 | MsG0780038309.01 | 0.863612 | 2.198253e-64 | 6.704650e-61 |
| MsG0380017891.01 | MsG0780038309.01 | 0.802636 | 5.107911e-49 | 2.514703e-46 |
| MsG0480018091.01 | MsG0780038309.01 | 0.813705 | 2.235897e-51 | 1.470771e-48 |
| MsG0480018402.01 | MsG0780038309.01 | -0.809268 | 2.058075e-50 | 1.202891e-47 |
| MsG0580027103.01 | MsG0780038309.01 | -0.848365 | 6.419083e-60 | 1.175250e-56 |
| MsG0580028044.01 | MsG0780038309.01 | -0.800815 | 1.207590e-48 | 5.676685e-46 |
| MsG0580028613.01 | MsG0780038309.01 | 0.813360 | 2.662863e-51 | 1.735338e-48 |
| MsG0580028630.01 | MsG0780038309.01 | -0.815875 | 7.388905e-52 | 5.155364e-49 |
| MsG0580029514.01 | MsG0780038309.01 | 0.849266 | 3.611489e-60 | 6.808812e-57 |
| MsG0580029717.01 | MsG0780038309.01 | -0.816519 | 5.305017e-52 | 3.767280e-49 |
| MsG0580029924.01 | MsG0780038309.01 | -0.800493 | 1.404782e-48 | 6.550118e-46 |
| MsG0580029925.01 | MsG0780038309.01 | -0.802695 | 4.966108e-49 | 2.448674e-46 |
| MsG0680030356.01 | MsG0780038309.01 | 0.802498 | 5.451943e-49 | 2.674668e-46 |
| MsG0680030555.01 | MsG0780038309.01 | -0.824028 | 1.007440e-53 | 8.819581e-51 |
| MsG0280006526.01 | MsG0780038309.01 | 0.850061 | 2.166432e-60 | 4.191880e-57 |
| MsG0280007062.01 | MsG0780038309.01 | -0.818825 | 1.601634e-52 | 1.211743e-49 |
| MsG0280007193.01 | MsG0780038309.01 | 0.869731 | 2.486148e-66 | 9.426180e-63 |
| MsG0280007211.01 | MsG0780038309.01 | 0.823408 | 1.407825e-53 | 1.211011e-50 |
| MsG0280007723.01 | MsG0780038309.01 | 0.840685 | 7.492568e-58 | 1.075457e-54 |
| MsG0280008304.01 | MsG0780038309.01 | 0.817642 | 2.966403e-52 | 2.172345e-49 |
| MsG0280008307.01 | MsG0780038309.01 | 0.816924 | 4.302862e-52 | 3.089837e-49 |
| MsG0280008660.01 | MsG0780038309.01 | 0.838426 | 2.897078e-57 | 3.878896e-54 |
| MsG0280008928.01 | MsG0780038309.01 | -0.833551 | 4.996526e-56 | 5.773806e-53 |
| MsG0280008929.01 | MsG0780038309.01 | -0.828512 | 8.626088e-55 | 8.592663e-52 |
| MsG0280009685.01 | MsG0780038309.01 | -0.808653 | 2.786459e-50 | 1.602108e-47 |
| MsG0280010288.01 | MsG0780038309.01 | -0.811491 | 6.818512e-51 | 4.226679e-48 |
| MsG0280010532.01 | MsG0780038309.01 | 0.834428 | 3.014581e-56 | 3.576587e-53 |
| MsG0680035765.01 | MsG0780038309.01 | -0.806703 | 7.230732e-50 | 3.951297e-47 |
| MsG0780035961.01 | MsG0780038309.01 | -0.800358 | 1.496310e-48 | 6.953284e-46 |
| MsG0780036089.01 | MsG0780038309.01 | 0.827628 | 1.408371e-54 | 1.367010e-51 |
| MsG0780036396.01 | MsG0780038309.01 | 0.802329 | 5.906379e-49 | 2.885393e-46 |
| MsG0780036544.01 | MsG0780038309.01 | 0.812312 | 4.516967e-51 | 2.862249e-48 |
| MsG0780037506.01 | MsG0780038309.01 | 0.822349 | 2.484856e-53 | 2.074627e-50 |
| MsG0780038309.01 | MsG0780038473.01 | 0.885787 | 6.013531e-72 | 4.184662e-68 |
| MsG0780038309.01 | MsG0780038584.01 | 0.800889 | 1.166275e-48 | 5.493214e-46 |
| MsG0780038309.01 | MsG0780038598.01 | 0.816602 | 5.082441e-52 | 3.617443e-49 |
| MsG0780038309.01 | MsG0780039747.01 | 0.811226 | 7.782261e-51 | 4.790409e-48 |
| MsG0780038309.01 | MsG0780039867.01 | 0.843443 | 1.396714e-58 | 2.185699e-55 |
| MsG0780038309.01 | MsG0780039997.01 | 0.840151 | 1.033395e-57 | 1.459042e-54 |
| MsG0780038309.01 | MsG0780040148.01 | 0.836050 | 1.174158e-56 | 1.462532e-53 |
| MsG0780038309.01 | MsG0780040295.01 | 0.819820 | 9.503335e-53 | 7.391541e-50 |
| MsG0780038309.01 | MsG0780040566.01 | 0.905945 | 2.508678e-80 | 4.155625e-76 |
| MsG0780038309.01 | MsG0780040576.01 | 0.832208 | 1.077981e-55 | 1.196607e-52 |
| MsG0780038309.01 | MsG0780040596.01 | -0.807454 | 5.015341e-50 | 2.794713e-47 |
| MsG0780038309.01 | MsG0780041117.01 | 0.840635 | 7.723708e-58 | 1.106862e-54 |
| MsG0780038309.01 | MsG0780041729.01 | 0.809284 | 2.041506e-50 | 1.193741e-47 |
| MsG0780038309.01 | MsG0780041747.01 | -0.805863 | 1.087110e-49 | 5.814737e-47 |
| MsG0780038309.01 | MsG0880042987.01 | 0.854811 | 9.597938e-62 | 2.170416e-58 |
| MsG0780038309.01 | MsG0880044389.01 | 0.804573 | 2.024989e-49 | 1.047707e-46 |
| MsG0780038309.01 | MsG0880044611.01 | 0.867185 | 1.648451e-65 | 5.702973e-62 |
| MsG0780038309.01 | MsG0880045010.01 | 0.859098 | 5.230122e-63 | 1.365048e-59 |
| MsG0780038309.01 | MsG0880045548.01 | 0.801809 | 7.555695e-49 | 3.642412e-46 |
| MsG0780038309.01 | MsG0880045605.01 | 0.852220 | 5.324208e-61 | 1.104829e-57 |
| MsG0780038309.01 | MsG0880046384.01 | 0.831529 | 1.585551e-55 | 1.725305e-52 |
| MsG0780038309.01 | MsG0880046825.01 | 0.821061 | 4.931282e-53 | 3.970435e-50 |
| MsG0780038309.01 | MsG0880046930.01 | -0.814816 | 1.270640e-51 | 8.613235e-49 |
| MsG0780038309.01 | MsG0880046963.01 | 0.837247 | 5.818498e-57 | 7.512991e-54 |
| MsG0780038309.01 | MsG0880047689.01 | 0.807359 | 5.254668e-50 | 2.920670e-47 |
| MsG0780038309.01 | MsG0880047703.01 | -0.818836 | 1.592448e-52 | 1.205207e-49 |
| MsG0780038309.01 | MsG0880047763.01 | -0.835105 | 2.036954e-56 | 2.465816e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038309.01.T01 | MTR_4g075550 | 98.592 | 142 | 2 | 0 | 30 | 171 | 1 | 142 | 2.41e-94 | 285 |
| MsG0780038309.01.T01 | MTR_3g113920 | 72.078 | 154 | 39 | 1 | 30 | 179 | 1 | 154 | 4.61e-74 | 233 |
| MsG0780038309.01.T01 | MTR_8g447090 | 91.176 | 102 | 4 | 1 | 331 | 432 | 829 | 925 | 4.48e-52 | 189 |
| MsG0780038309.01.T01 | MTR_2g063620 | 74.783 | 115 | 24 | 1 | 318 | 432 | 764 | 873 | 1.42e-47 | 176 |
| MsG0780038309.01.T01 | MTR_6g091960 | 64.444 | 135 | 38 | 2 | 301 | 430 | 804 | 933 | 7.69e-45 | 167 |
| MsG0780038309.01.T01 | MTR_2g063813 | 61.972 | 142 | 44 | 2 | 301 | 437 | 789 | 925 | 8.54e-45 | 167 |
| MsG0780038309.01.T01 | MTR_3g074040 | 76.842 | 95 | 5 | 1 | 230 | 324 | 53 | 130 | 7.82e-40 | 146 |
| MsG0780038309.01.T01 | MTR_8g012605 | 46.259 | 147 | 75 | 1 | 37 | 179 | 9 | 155 | 6.35e-37 | 136 |
| MsG0780038309.01.T01 | MTR_8g012600 | 41.304 | 138 | 81 | 0 | 35 | 172 | 7 | 144 | 7.31e-31 | 120 |
| MsG0780038309.01.T01 | MTR_8g012595 | 47.541 | 122 | 64 | 0 | 43 | 164 | 15 | 136 | 6.98e-26 | 106 |
| MsG0780038309.01.T01 | MTR_8g012615 | 51.471 | 68 | 33 | 0 | 104 | 171 | 9 | 76 | 7.45e-15 | 73.6 |
| MsG0780038309.01.T01 | MTR_8g091330 | 76.316 | 38 | 9 | 0 | 287 | 324 | 75 | 112 | 3.98e-14 | 73.6 |
| MsG0780038309.01.T01 | MTR_8g091330 | 76.316 | 38 | 9 | 0 | 287 | 324 | 67 | 104 | 4.06e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038309.01.T01 | AT2G21190 | 88.489 | 139 | 16 | 0 | 34 | 172 | 2 | 140 | 2.92e-83 | 257 |
| MsG0780038309.01.T01 | AT4G38790 | 81.333 | 150 | 24 | 1 | 34 | 179 | 6 | 155 | 4.97e-80 | 249 |
| MsG0780038309.01.T01 | AT1G75760 | 77.922 | 154 | 30 | 1 | 30 | 179 | 1 | 154 | 2.41e-78 | 243 |
| MsG0780038309.01.T01 | AT1G75760 | 77.922 | 154 | 30 | 1 | 30 | 179 | 1 | 154 | 1.31e-77 | 242 |
| MsG0780038309.01.T01 | AT1G75760 | 77.922 | 154 | 30 | 1 | 30 | 179 | 1 | 154 | 1.33e-77 | 243 |
| MsG0780038309.01.T01 | AT1G19970 | 73.239 | 142 | 38 | 0 | 30 | 171 | 1 | 142 | 3.26e-72 | 227 |
| MsG0780038309.01.T01 | AT1G19970 | 73.239 | 142 | 38 | 0 | 30 | 171 | 1 | 142 | 9.70e-72 | 227 |
| MsG0780038309.01.T01 | AT1G79350 | 80.392 | 102 | 18 | 1 | 331 | 432 | 869 | 968 | 1.32e-46 | 173 |
| MsG0780038309.01.T01 | AT3G25160 | 53.901 | 141 | 65 | 0 | 31 | 171 | 4 | 144 | 1.62e-45 | 159 |
| MsG0780038309.01.T01 | AT1G78050 | 52.885 | 104 | 28 | 4 | 223 | 324 | 31 | 115 | 4.14e-19 | 88.6 |
| MsG0780038309.01.T01 | AT1G22170 | 54.217 | 83 | 21 | 1 | 242 | 324 | 49 | 114 | 4.16e-18 | 85.5 |
| MsG0780038309.01.T01 | AT1G22170 | 54.217 | 83 | 21 | 1 | 242 | 324 | 49 | 114 | 4.16e-18 | 85.5 |
Find 90 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTATCCTACTTGATTTCT+TGG | 0.208577 | 7:-43915689 | None:intergenic |
| TATAATTACGACAGTGCTTA+TGG | 0.239412 | 7:+43917126 | MsG0780038309.01.T01:CDS |
| TTAACTAATAACCTGTATTC+TGG | 0.250507 | 7:-43916196 | None:intergenic |
| CGCAGGCATGTTGGATTTAT+CGG | 0.253387 | 7:+43917003 | MsG0780038309.01.T01:CDS |
| ACGACTCACCGTGTCGAATA+AGG | 0.265042 | 7:-43915893 | None:intergenic |
| CATTCACACCATACTTGATT+TGG | 0.298660 | 7:+43914601 | MsG0780038309.01.T01:CDS |
| AAAATATAGCTGTCAATTCT+TGG | 0.300986 | 7:-43914538 | None:intergenic |
| ATCCTTCTCTTCCATGTAAC+TGG | 0.305415 | 7:-43914678 | None:intergenic |
| TTCACCTGATGGTCAGTTCT+AGG | 0.336534 | 7:-43915043 | None:intergenic |
| AGGATACTCTTTACTAATCT+TGG | 0.337533 | 7:+43916912 | MsG0780038309.01.T01:intron |
| TGAACTCCTTGTTTATGATT+TGG | 0.350658 | 7:+43915989 | MsG0780038309.01.T01:CDS |
| CATCGTTGATGATGATGTTA+AGG | 0.365610 | 7:-43913842 | None:intergenic |
| ATCTCTTGGTGCTTTGACTC+GGG | 0.368013 | 7:+43916977 | MsG0780038309.01.T01:CDS |
| TCACTGGTGTTGCTTCTTGA+AGG | 0.378328 | 7:-43915661 | None:intergenic |
| GCGAGAAAAGCCTTGACCTT+TGG | 0.383761 | 7:-43913919 | None:intergenic |
| GACCGTGCAATTCAGCAGTT+TGG | 0.393179 | 7:+43916142 | MsG0780038309.01.T01:CDS |
| AAATATAGCTGTCAATTCTT+GGG | 0.396095 | 7:-43914537 | None:intergenic |
| GATTATGTACAAAGGAATAA+TGG | 0.409522 | 7:+43917164 | MsG0780038309.01.T01:CDS |
| ATCGTTGATGATGATGTTAA+GGG | 0.410027 | 7:-43913841 | None:intergenic |
| TGATTTCTTGGAGGTGTCAC+TGG | 0.420374 | 7:-43915677 | None:intergenic |
| AAAAGTCGCCAAATCAAGTA+TGG | 0.420484 | 7:-43914609 | None:intergenic |
| AATGAAACTGATAGCCGCTT+TGG | 0.429281 | 7:+43915565 | MsG0780038309.01.T01:CDS |
| TTTAGGATGAAACAAACAAT+TGG | 0.430492 | 7:-43914729 | None:intergenic |
| GCTGAAGCTGTTCACTCGCT+TGG | 0.434191 | 7:+43914015 | MsG0780038309.01.T01:CDS |
| AATGAGAAGGATTTGTTCAC+AGG | 0.440347 | 7:+43915921 | MsG0780038309.01.T01:CDS |
| AATCTCTTGGTGCTTTGACT+CGG | 0.442648 | 7:+43916976 | MsG0780038309.01.T01:CDS |
| TGCTTTGACTCGGGGACCGC+AGG | 0.447204 | 7:+43916986 | MsG0780038309.01.T01:CDS |
| CGTGATCATGAACGATAAAT+CGG | 0.455398 | 7:-43913975 | None:intergenic |
| AGAAAAGCCTTGACCTTTGG+TGG | 0.460519 | 7:-43913916 | None:intergenic |
| ATTTAACACTAGAGCTTCCA+TGG | 0.466901 | 7:+43916113 | MsG0780038309.01.T01:CDS |
| TATCCTACTTGATTTCTTGG+AGG | 0.471957 | 7:-43915686 | None:intergenic |
| CACTGGTGTTGCTTCTTGAA+GGG | 0.478384 | 7:-43915660 | None:intergenic |
| CTCGGGGACCGCAGGCATGT+TGG | 0.478530 | 7:+43916994 | MsG0780038309.01.T01:CDS |
| TCTCGCTGTTGTTTCCGGTA+TGG | 0.484049 | 7:+43913936 | MsG0780038309.01.T01:CDS |
| AAGCTTCGGCACCAGAATAC+AGG | 0.487165 | 7:+43916185 | MsG0780038309.01.T01:CDS |
| AACAACAGATGTCTGAGAAT+GGG | 0.489227 | 7:-43915623 | None:intergenic |
| ATGGAGTGGATCGATGTTCT+CGG | 0.489448 | 7:-43913871 | None:intergenic |
| AACTCACTCACTCATGGGTC+AGG | 0.490405 | 7:+43913762 | None:intergenic |
| ATACTCTTTACTAATCTTGG+TGG | 0.491169 | 7:+43916915 | MsG0780038309.01.T01:CDS |
| TCATATATCAAATCAAGCTT+CGG | 0.492276 | 7:+43916171 | MsG0780038309.01.T01:CDS |
| TTCGACACGGTGAGTCGTTG+TGG | 0.492540 | 7:+43915898 | MsG0780038309.01.T01:CDS |
| CTTCTTGAAGGGGACAACAC+TGG | 0.493946 | 7:-43915649 | None:intergenic |
| CAGCACAAGAACAAAACCTT+TGG | 0.496096 | 7:-43913794 | None:intergenic |
| TAACAACAGATGTCTGAGAA+TGG | 0.497002 | 7:-43915624 | None:intergenic |
| ACTCCATCTCCACATGGGTC+AGG | 0.499272 | 7:+43913887 | MsG0780038309.01.T01:CDS |
| GCGAAGAGATTAGAATCTCT+TGG | 0.499307 | 7:+43916963 | MsG0780038309.01.T01:CDS |
| GAGAACAAGAGCGGCCATAC+CGG | 0.503947 | 7:-43913950 | None:intergenic |
| ATGAAGGAGAAGACTTGTGC+TGG | 0.507531 | 7:+43914063 | MsG0780038309.01.T01:CDS |
| TAAATTGAAGGCCAGTTACA+TGG | 0.507681 | 7:+43914667 | MsG0780038309.01.T01:CDS |
| CACAAGAACAAAACCTTTGG+TGG | 0.517756 | 7:-43913791 | None:intergenic |
| TGATCCTAGAACTGACCATC+AGG | 0.519085 | 7:+43915039 | MsG0780038309.01.T01:CDS |
| TAACTTTGCAATTTACTATG+TGG | 0.522735 | 7:+43914700 | MsG0780038309.01.T01:CDS |
| ACTGGTGTTGCTTCTTGAAG+GGG | 0.533840 | 7:-43915659 | None:intergenic |
| TCTATACCCTTCTTGCTAAG+TGG | 0.548267 | 7:-43915957 | None:intergenic |
| TCGCCTGACCCATGTGGAGA+TGG | 0.549344 | 7:-43913890 | None:intergenic |
| ACGACAGTGCTTATGGAAAG+AGG | 0.549720 | 7:+43917133 | MsG0780038309.01.T01:CDS |
| GAATTACAACACAATTCCTC+TGG | 0.554403 | 7:-43915588 | None:intergenic |
| CGATCCACTCCATCTCCACA+TGG | 0.558339 | 7:+43913881 | MsG0780038309.01.T01:CDS |
| TCTCTTGGTGCTTTGACTCG+GGG | 0.560258 | 7:+43916978 | MsG0780038309.01.T01:CDS |
| GTACAAAGGAATAATGGAGC+AGG | 0.560792 | 7:+43917170 | MsG0780038309.01.T01:CDS |
| GGCCAGTTACATGGAAGAGA+AGG | 0.570793 | 7:+43914676 | MsG0780038309.01.T01:CDS |
| TAATTATAAGCACTTAATGA+AGG | 0.575665 | 7:-43917111 | None:intergenic |
| CTGATAGCCGCTTTGGCCAG+AGG | 0.585475 | 7:+43915572 | MsG0780038309.01.T01:CDS |
| TGATGTACCACTTAGCAAGA+AGG | 0.585970 | 7:+43915950 | MsG0780038309.01.T01:CDS |
| TTCCAAACTGCTGAATTGCA+CGG | 0.592445 | 7:-43916144 | None:intergenic |
| CACAATTCCTCTGGCCAAAG+CGG | 0.593339 | 7:-43915579 | None:intergenic |
| ATTGCACGGTCAGCACTCCA+TGG | 0.597576 | 7:-43916130 | None:intergenic |
| CGACAGTGCTTATGGAAAGA+GGG | 0.598939 | 7:+43917134 | MsG0780038309.01.T01:CDS |
| TCTTATCTATAAACTCATGA+AGG | 0.599329 | 7:+43914047 | MsG0780038309.01.T01:CDS |
| GATGTACCACTTAGCAAGAA+GGG | 0.602199 | 7:+43915951 | MsG0780038309.01.T01:CDS |
| GCGACAACCACCAAAGGTCA+AGG | 0.619702 | 7:+43913909 | MsG0780038309.01.T01:CDS |
| TGAGTCGTTGTGGAATGAGA+AGG | 0.622883 | 7:+43915908 | MsG0780038309.01.T01:CDS |
| GGTCAGGCGACAACCACCAA+AGG | 0.628509 | 7:+43913778 | MsG0780038309.01.T01:CDS |
| GGTCAGGCGACAACCACCAA+AGG | 0.628509 | 7:+43913903 | MsG0780038309.01.T01:CDS |
| TAGCAAGAAGGGTATAGATG+AGG | 0.640367 | 7:+43915962 | MsG0780038309.01.T01:CDS |
| ACACCTCCAAGAAATCAAGT+AGG | 0.641486 | 7:+43915683 | MsG0780038309.01.T01:CDS |
| TGACCCATGTGGAGATGGAG+TGG | 0.646092 | 7:-43913885 | None:intergenic |
| ACCACACCAAATCATAAACA+AGG | 0.648498 | 7:-43915995 | None:intergenic |
| GCTTTGATCCTTATTCGACA+CGG | 0.654420 | 7:+43915885 | MsG0780038309.01.T01:CDS |
| CGATAAATCCAACATGCCTG+CGG | 0.660874 | 7:-43917002 | None:intergenic |
| GCACTGATGATTATGTACAA+AGG | 0.668125 | 7:+43917156 | MsG0780038309.01.T01:CDS |
| TCAGTGAGGATGAGAAGACG+AGG | 0.674872 | 7:-43915019 | None:intergenic |
| GATCCACTCCATCTCCACAT+GGG | 0.683259 | 7:+43913882 | MsG0780038309.01.T01:CDS |
| GATCATGAACGATAAATCGG+AGG | 0.692285 | 7:-43913972 | None:intergenic |
| TAACATCATCATCAACGATG+AGG | 0.692652 | 7:+43913845 | MsG0780038309.01.T01:CDS |
| GAGTGGATCGATGTTCTCGG+AGG | 0.705193 | 7:-43913868 | None:intergenic |
| AAATCGGAGGAGAACAAGAG+CGG | 0.713382 | 7:-43913959 | None:intergenic |
| TGGTTGTCGCCTGACCCATG+TGG | 0.729979 | 7:-43913896 | None:intergenic |
| GGTCAGTTCTAGGATCAGTG+AGG | 0.760014 | 7:-43915033 | None:intergenic |
| CATGTATATAACCCACACCG+TGG | 0.775290 | 7:-43914636 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAGAATTGAATTTTTT+TGG | + | Chr7:43914115-43914134 | MsG0780038309.01.T01:intron | 10.0% |
| !!! | AAAAAGAATTGAATTTTTTT+GGG | + | Chr7:43914116-43914135 | MsG0780038309.01.T01:intron | 10.0% |
| !! | ATTAAGTTAACTAATTAACT+TGG | - | Chr7:43916276-43916295 | None:intergenic | 15.0% |
| !! | TGAATGATAAAACATAAAAA+GGG | - | Chr7:43914208-43914227 | None:intergenic | 15.0% |
| !! | TTGAAACAATTAAAATTATC+TGG | - | Chr7:43916701-43916720 | None:intergenic | 15.0% |
| !! | TTGAATGATAAAACATAAAA+AGG | - | Chr7:43914209-43914228 | None:intergenic | 15.0% |
| !!! | AAATGGATTTTTAATCTAAA+AGG | + | Chr7:43915402-43915421 | MsG0780038309.01.T01:intron | 15.0% |
| !!! | AGGATAGTTTTTTTAATAAT+TGG | + | Chr7:43914229-43914248 | MsG0780038309.01.T01:intron | 15.0% |
| !!! | ATGAAAAAGATCAATTTTTT+GGG | + | Chr7:43914294-43914313 | MsG0780038309.01.T01:intron | 15.0% |
| !!! | GATTTTAATTAATGAAACAA+TGG | - | Chr7:43915347-43915366 | None:intergenic | 15.0% |
| !!! | TTTTATGTTTTATCATTCAA+AGG | + | Chr7:43914209-43914228 | MsG0780038309.01.T01:intron | 15.0% |
| !! | AAAAAACATAAAACGTTACA+TGG | + | Chr7:43914268-43914287 | MsG0780038309.01.T01:intron | 20.0% |
| !! | AAAAACATAAAACGTTACAT+GGG | + | Chr7:43914269-43914288 | MsG0780038309.01.T01:intron | 20.0% |
| !! | AGAACAAATAGTTAAAGATT+CGG | - | Chr7:43914959-43914978 | None:intergenic | 20.0% |
| !! | AGTTGAAATTGTCATATAAT+TGG | + | Chr7:43915816-43915835 | MsG0780038309.01.T01:intron | 20.0% |
| !! | ATTGCTCTTAAAAAATTACA+TGG | + | Chr7:43914353-43914372 | MsG0780038309.01.T01:intron | 20.0% |
| !! | GGCTTATATATTTCATTTAT+TGG | + | Chr7:43915127-43915146 | MsG0780038309.01.T01:intron | 20.0% |
| !! | TAAAATTATCTGGTTACTAT+AGG | - | Chr7:43916691-43916710 | None:intergenic | 20.0% |
| !! | TAACAACTTCTTATGTATTT+AGG | - | Chr7:43916724-43916743 | None:intergenic | 20.0% |
| !! | TAATTATAAGCACTTAATGA+AGG | - | Chr7:43917114-43917133 | None:intergenic | 20.0% |
| !! | TTGCTCTTAAAAAATTACAT+GGG | + | Chr7:43914354-43914373 | MsG0780038309.01.T01:intron | 20.0% |
| !!! | ATTCTTTTTTGTAAAATCGA+AGG | - | Chr7:43914105-43914124 | None:intergenic | 20.0% |
| !!! | CATGAAAAAGATCAATTTTT+TGG | + | Chr7:43914293-43914312 | MsG0780038309.01.T01:intron | 20.0% |
| !!! | CATTTTTTCCTACTTTTTTA+TGG | + | Chr7:43914796-43914815 | MsG0780038309.01.T01:intron | 20.0% |
| !!! | GCTATATTTTTTGTTGTTTT+TGG | + | Chr7:43915106-43915125 | MsG0780038309.01.T01:intron | 20.0% |
| !!! | TTCTTTTTTGTAAAATCGAA+GGG | - | Chr7:43914104-43914123 | None:intergenic | 20.0% |
| !!! | TTGAATCTTTTTGTTTTCTT+GGG | + | Chr7:43914152-43914171 | MsG0780038309.01.T01:intron | 20.0% |
| !!! | TTTGAATCTTTTTGTTTTCT+TGG | + | Chr7:43914151-43914170 | MsG0780038309.01.T01:intron | 20.0% |
| !!! | TTTTTAATCTAAAAGGAATG+AGG | + | Chr7:43915409-43915428 | MsG0780038309.01.T01:intron | 20.0% |
| ! | AAAATATAGCTGTCAATTCT+TGG | - | Chr7:43914541-43914560 | None:intergenic | 25.0% |
| ! | AAACAATTGTGAAGCTTATA+TGG | - | Chr7:43916447-43916466 | None:intergenic | 25.0% |
| ! | AAATATAGCTGTCAATTCTT+GGG | - | Chr7:43914540-43914559 | None:intergenic | 25.0% |
| ! | ACAAAAAGAAAGGATGAATA+AGG | - | Chr7:43915293-43915312 | None:intergenic | 25.0% |
| ! | ATGTCTAATAACCTAAAACT+TGG | - | Chr7:43915790-43915809 | None:intergenic | 25.0% |
| ! | ATTATTCTCATAAATGCATC+AGG | + | Chr7:43916892-43916911 | MsG0780038309.01.T01:intron | 25.0% |
| ! | CATCTTTACCATAAAAAAGT+AGG | - | Chr7:43914807-43914826 | None:intergenic | 25.0% |
| ! | CATTTATGAGAATAATGATC+AGG | - | Chr7:43916888-43916907 | None:intergenic | 25.0% |
| ! | GATTATAAGTTAAATCAAGC+AGG | - | Chr7:43916029-43916048 | None:intergenic | 25.0% |
| ! | GATTATGTACAAAGGAATAA+TGG | + | Chr7:43917164-43917183 | MsG0780038309.01.T01:CDS | 25.0% |
| ! | TAACTTTGCAATTTACTATG+TGG | + | Chr7:43914700-43914719 | MsG0780038309.01.T01:CDS | 25.0% |
| ! | TCACTCAAAATTTCAAAACA+GGG | - | Chr7:43915375-43915394 | None:intergenic | 25.0% |
| ! | TCATATATCAAATCAAGCTT+CGG | + | Chr7:43916171-43916190 | MsG0780038309.01.T01:CDS | 25.0% |
| ! | TCTTATCTATAAACTCATGA+AGG | + | Chr7:43914047-43914066 | MsG0780038309.01.T01:CDS | 25.0% |
| ! | TTAACTAATAACCTGTATTC+TGG | - | Chr7:43916199-43916218 | None:intergenic | 25.0% |
| ! | TTCACAACAAACAAAAAGAA+AGG | - | Chr7:43915303-43915322 | None:intergenic | 25.0% |
| ! | TTCACTCAAAATTTCAAAAC+AGG | - | Chr7:43915376-43915395 | None:intergenic | 25.0% |
| ! | TTGACACAAAAACATCAATA+AGG | - | Chr7:43914768-43914787 | None:intergenic | 25.0% |
| !! | AAGGCAATGCTTTTAAATTT+AGG | - | Chr7:43914749-43914768 | None:intergenic | 25.0% |
| !! | AGATTTTTATCCCTTTAGAT+TGG | + | Chr7:43914329-43914348 | MsG0780038309.01.T01:intron | 25.0% |
| !! | TTTAGGATGAAACAAACAAT+TGG | - | Chr7:43914732-43914751 | None:intergenic | 25.0% |
| !!! | AAAAGATTTTGGTTGGTATT+AGG | + | Chr7:43916350-43916369 | MsG0780038309.01.T01:intron | 25.0% |
| !!! | AACTAATTAACTTGGTGTAA+CGG | - | Chr7:43916268-43916287 | None:intergenic | 25.0% |
| !!! | AATTTTTTATTGCCAAAGAC+AGG | - | Chr7:43916499-43916518 | None:intergenic | 25.0% |
| !!! | ATTTTTTATTGCCAAAGACA+GGG | - | Chr7:43916498-43916517 | None:intergenic | 25.0% |
| !!! | CATGATTCGTTTTAAATTGA+AGG | + | Chr7:43914655-43914674 | MsG0780038309.01.T01:CDS | 25.0% |
| !!! | GTTAATTTGATTTGTGTTTG+TGG | + | Chr7:43914395-43914414 | MsG0780038309.01.T01:intron | 25.0% |
| !!! | GTTTGTTTTTGTTTTGATGA+TGG | + | Chr7:43914481-43914500 | MsG0780038309.01.T01:intron | 25.0% |
| !!! | TATTGATGTTTTTGTGTCAA+TGG | + | Chr7:43914768-43914787 | MsG0780038309.01.T01:CDS | 25.0% |
| !!! | TCTTTTTTGTAAAATCGAAG+GGG | - | Chr7:43914103-43914122 | None:intergenic | 25.0% |
| !!! | TTGGCTTAATGTGTTATTTT+TGG | + | Chr7:43914418-43914437 | MsG0780038309.01.T01:intron | 25.0% |
| !!! | TTTTGAGTGAAATGTTGAAA+TGG | + | Chr7:43915385-43915404 | MsG0780038309.01.T01:intron | 25.0% |
| ACAATTGTTTAAGCAACAGT+TGG | + | Chr7:43916457-43916476 | MsG0780038309.01.T01:intron | 30.0% | |
| AGGATACTCTTTACTAATCT+TGG | + | Chr7:43916912-43916931 | MsG0780038309.01.T01:intron | 30.0% | |
| ATACTCTTTACTAATCTTGG+TGG | + | Chr7:43916915-43916934 | MsG0780038309.01.T01:CDS | 30.0% | |
| ATGGGTCAGGAAAAATTAAA+TGG | + | Chr7:43914372-43914391 | MsG0780038309.01.T01:intron | 30.0% | |
| ATGGTTATGAATGATGTAAC+AGG | + | Chr7:43914500-43914519 | MsG0780038309.01.T01:intron | 30.0% | |
| CTTAAAAAATTACATGGGTC+AGG | + | Chr7:43914359-43914378 | MsG0780038309.01.T01:intron | 30.0% | |
| GCATACATCATAACTTCTAT+AGG | - | Chr7:43916804-43916823 | None:intergenic | 30.0% | |
| TAGTTAACTTAATTCCTCTC+TGG | + | Chr7:43916283-43916302 | MsG0780038309.01.T01:intron | 30.0% | |
| TATAATTACGACAGTGCTTA+TGG | + | Chr7:43917126-43917145 | MsG0780038309.01.T01:CDS | 30.0% | |
| TATTAACAAGCAAACACGTA+AGG | - | Chr7:43915077-43915096 | None:intergenic | 30.0% | |
| TGGGTCAGGAAAAATTAAAT+GGG | + | Chr7:43914373-43914392 | MsG0780038309.01.T01:intron | 30.0% | |
| TTCTTGGGTCTTTGTTAATT+GGG | + | Chr7:43914167-43914186 | MsG0780038309.01.T01:intron | 30.0% | |
| TTGTCAAAATGCTATATTGC+TGG | + | Chr7:43916751-43916770 | MsG0780038309.01.T01:intron | 30.0% | |
| TTTCTTGGGTCTTTGTTAAT+TGG | + | Chr7:43914166-43914185 | MsG0780038309.01.T01:intron | 30.0% | |
| ! | AAAGGATGAATAAGGTTTTG+AGG | - | Chr7:43915285-43915304 | None:intergenic | 30.0% |
| ! | AAATCTTTTCCTTCAGACTT+TGG | - | Chr7:43916339-43916358 | None:intergenic | 30.0% |
| ! | AAGTCTGAAGGAAAAGATTT+TGG | + | Chr7:43916339-43916358 | MsG0780038309.01.T01:intron | 30.0% |
| ! | GATTTAGATCTCCAAGTTTT+AGG | + | Chr7:43915776-43915795 | MsG0780038309.01.T01:intron | 30.0% |
| ! | TGAACTCCTTGTTTATGATT+TGG | + | Chr7:43915989-43916008 | MsG0780038309.01.T01:CDS | 30.0% |
| ! | TTGTGCATTTTGCTTTCATA+AGG | + | Chr7:43915157-43915176 | MsG0780038309.01.T01:intron | 30.0% |
| !! | AAGGATGAATAAGGTTTTGA+GGG | - | Chr7:43915284-43915303 | None:intergenic | 30.0% |
| !! | ATCGTTGATGATGATGTTAA+GGG | - | Chr7:43913844-43913863 | None:intergenic | 30.0% |
| !! | ATTTGATTTGTGTTTGTGGT+TGG | + | Chr7:43914399-43914418 | MsG0780038309.01.T01:intron | 30.0% |
| !! | TTGTTTTGTGCATTTTGCAT+AGG | + | Chr7:43915498-43915517 | MsG0780038309.01.T01:intron | 30.0% |
| !!! | CAGCTATATTTTTAGCTGTT+AGG | + | Chr7:43914549-43914568 | MsG0780038309.01.T01:CDS | 30.0% |
| !!! | CTTTTTTGTAAAATCGAAGG+GGG | - | Chr7:43914102-43914121 | None:intergenic | 30.0% |
| AAAAGTCGCCAAATCAAGTA+TGG | - | Chr7:43914612-43914631 | None:intergenic | 35.0% | |
| AAACAGAATACTTTGCCTTC+AGG | - | Chr7:43916421-43916440 | None:intergenic | 35.0% | |
| AAACGGTTATGTTGTTGAAG+AGG | - | Chr7:43915226-43915245 | None:intergenic | 35.0% | |
| AACAACAGATGTCTGAGAAT+GGG | - | Chr7:43915626-43915645 | None:intergenic | 35.0% | |
| AACATAGAACCAAAGTCTGA+AGG | + | Chr7:43916327-43916346 | MsG0780038309.01.T01:intron | 35.0% | |
| AAGAGCAATGCCAATCTAAA+GGG | - | Chr7:43914342-43914361 | None:intergenic | 35.0% | |
| AAGCAAACACGTAAGGATAA+CGG | - | Chr7:43915070-43915089 | None:intergenic | 35.0% | |
| ACACTACTCACAAACTCAAT+AGG | - | Chr7:43916539-43916558 | None:intergenic | 35.0% | |
| ACCACACCAAATCATAAACA+AGG | - | Chr7:43915998-43916017 | None:intergenic | 35.0% | |
| AGATCAATGTCAATGAAACG+TGG | - | Chr7:43916618-43916637 | None:intergenic | 35.0% | |
| ATTTAACACTAGAGCTTCCA+TGG | + | Chr7:43916113-43916132 | MsG0780038309.01.T01:CDS | 35.0% | |
| CATTCACACCATACTTGATT+TGG | + | Chr7:43914601-43914620 | MsG0780038309.01.T01:CDS | 35.0% | |
| CGTGATCATGAACGATAAAT+CGG | - | Chr7:43913978-43913997 | None:intergenic | 35.0% | |
| GAATTACAACACAATTCCTC+TGG | - | Chr7:43915591-43915610 | None:intergenic | 35.0% | |
| GCTTATCCTACTTGATTTCT+TGG | - | Chr7:43915692-43915711 | None:intergenic | 35.0% | |
| TAAATTGAAGGCCAGTTACA+TGG | + | Chr7:43914667-43914686 | MsG0780038309.01.T01:CDS | 35.0% | |
| TAACAACAGATGTCTGAGAA+TGG | - | Chr7:43915627-43915646 | None:intergenic | 35.0% | |
| TAACATCATCATCAACGATG+AGG | + | Chr7:43913845-43913864 | MsG0780038309.01.T01:CDS | 35.0% | |
| TAAGAGCAATGCCAATCTAA+AGG | - | Chr7:43914343-43914362 | None:intergenic | 35.0% | |
| TATCCTACTTGATTTCTTGG+AGG | - | Chr7:43915689-43915708 | None:intergenic | 35.0% | |
| TCAATGAAACGTGGTAGTAT+TGG | - | Chr7:43916609-43916628 | None:intergenic | 35.0% | |
| TGTATACTACCATTGCACAA+AGG | - | Chr7:43914912-43914931 | None:intergenic | 35.0% | |
| ! | AACAGTTGGACAAACTTGTT+TGG | + | Chr7:43916471-43916490 | MsG0780038309.01.T01:intron | 35.0% |
| ! | AATGAGAAGGATTTGTTCAC+AGG | + | Chr7:43915921-43915940 | MsG0780038309.01.T01:CDS | 35.0% |
| ! | ATGTTGTTGAAGAGGTTTTG+AGG | - | Chr7:43915218-43915237 | None:intergenic | 35.0% |
| ! | GATGTTAAGGGTTTTCTTTG+AGG | - | Chr7:43913832-43913851 | None:intergenic | 35.0% |
| ! | GCACTGATGATTATGTACAA+AGG | + | Chr7:43917156-43917175 | MsG0780038309.01.T01:CDS | 35.0% |
| ! | TCGTCTTTTCTGTTGTGTAA+AGG | - | Chr7:43916089-43916108 | None:intergenic | 35.0% |
| !! | CATCGTTGATGATGATGTTA+AGG | - | Chr7:43913845-43913864 | None:intergenic | 35.0% |
| !! | CTGAAGGAAAAGATTTTGGT+TGG | + | Chr7:43916343-43916362 | MsG0780038309.01.T01:intron | 35.0% |
| !! | TCCTTGTTTATGATTTGGTG+TGG | + | Chr7:43915994-43916013 | MsG0780038309.01.T01:intron | 35.0% |
| !! | TGAAGAAGTATCAGTGTCAA+AGG | + | Chr7:43916570-43916589 | MsG0780038309.01.T01:intron | 35.0% |
| !! | TGTTGTTGAAGAGGTTTTGA+GGG | - | Chr7:43915217-43915236 | None:intergenic | 35.0% |
| !!! | GCTGTATTGTAGTTTTGTCA+TGG | + | Chr7:43914571-43914590 | MsG0780038309.01.T01:CDS | 35.0% |
| AACTTAGAACTGAAGCCTGA+AGG | + | Chr7:43916403-43916422 | MsG0780038309.01.T01:intron | 40.0% | |
| AATGAAACTGATAGCCGCTT+TGG | + | Chr7:43915565-43915584 | MsG0780038309.01.T01:CDS | 40.0% | |
| ACACCTCCAAGAAATCAAGT+AGG | + | Chr7:43915683-43915702 | MsG0780038309.01.T01:CDS | 40.0% | |
| AGACTCGATAGCGATAGATT+TGG | + | Chr7:43916829-43916848 | MsG0780038309.01.T01:intron | 40.0% | |
| ATCCTTCTCTTCCATGTAAC+TGG | - | Chr7:43914681-43914700 | None:intergenic | 40.0% | |
| ATCTATCGCTATCGAGTCTA+AGG | - | Chr7:43916828-43916847 | None:intergenic | 40.0% | |
| CACAAGAACAAAACCTTTGG+TGG | - | Chr7:43913794-43913813 | None:intergenic | 40.0% | |
| CAGCACAAGAACAAAACCTT+TGG | - | Chr7:43913797-43913816 | None:intergenic | 40.0% | |
| CAGGTAAAACTAGTATAGCC+TGG | - | Chr7:43916869-43916888 | None:intergenic | 40.0% | |
| GATCATGAACGATAAATCGG+AGG | - | Chr7:43913975-43913994 | None:intergenic | 40.0% | |
| GATGTACCACTTAGCAAGAA+GGG | + | Chr7:43915951-43915970 | MsG0780038309.01.T01:CDS | 40.0% | |
| GCGAAGAGATTAGAATCTCT+TGG | + | Chr7:43916963-43916982 | MsG0780038309.01.T01:CDS | 40.0% | |
| GCTTTGATCCTTATTCGACA+CGG | + | Chr7:43915885-43915904 | MsG0780038309.01.T01:CDS | 40.0% | |
| GTTACTATAGGACAGTAGGA+CGG | - | Chr7:43916679-43916698 | None:intergenic | 40.0% | |
| TCTATACCCTTCTTGCTAAG+TGG | - | Chr7:43915960-43915979 | None:intergenic | 40.0% | |
| TCTATCGCTATCGAGTCTAA+GGG | - | Chr7:43916827-43916846 | None:intergenic | 40.0% | |
| TCTGGTTACTATAGGACAGT+AGG | - | Chr7:43916683-43916702 | None:intergenic | 40.0% | |
| TCTGTTGTGTAAAGGTCACA+GGG | - | Chr7:43916081-43916100 | None:intergenic | 40.0% | |
| TGATGTACCACTTAGCAAGA+AGG | + | Chr7:43915950-43915969 | MsG0780038309.01.T01:CDS | 40.0% | |
| TGGGTCTTTGTTAATTGGGT+AGG | + | Chr7:43914171-43914190 | MsG0780038309.01.T01:intron | 40.0% | |
| TTCCAAACTGCTGAATTGCA+CGG | - | Chr7:43916147-43916166 | None:intergenic | 40.0% | |
| TTCTGTTGTGTAAAGGTCAC+AGG | - | Chr7:43916082-43916101 | None:intergenic | 40.0% | |
| TTGCAGATATGAAACCAGAG+AGG | - | Chr7:43916300-43916319 | None:intergenic | 40.0% | |
| TTTCTGTTCCAACTCAGATG+AGG | + | Chr7:43915860-43915879 | MsG0780038309.01.T01:intron | 40.0% | |
| TTTGCTTTGTCTGCTTTGTC+TGG | + | Chr7:43915188-43915207 | MsG0780038309.01.T01:intron | 40.0% | |
| ! | GGACAGTTGTGTTGTTGAAA+CGG | - | Chr7:43915243-43915262 | None:intergenic | 40.0% |
| ! | GTACAAAGGAATAATGGAGC+AGG | + | Chr7:43917170-43917189 | MsG0780038309.01.T01:CDS | 40.0% |
| ! | TAGCAAGAAGGGTATAGATG+AGG | + | Chr7:43915962-43915981 | MsG0780038309.01.T01:CDS | 40.0% |
| !! | AATCTCTTGGTGCTTTGACT+CGG | + | Chr7:43916976-43916995 | MsG0780038309.01.T01:CDS | 40.0% |
| !! | ACGTGGTAGTATTGGAGTTT+TGG | - | Chr7:43916601-43916620 | None:intergenic | 40.0% |
| !! | TTGGTTGATAATGTCTTGCC+AGG | + | Chr7:43916848-43916867 | MsG0780038309.01.T01:intron | 40.0% |
| AAAGGTCACAGGGCACATAA+TGG | - | Chr7:43916071-43916090 | None:intergenic | 45.0% | |
| AAATCGGAGGAGAACAAGAG+CGG | - | Chr7:43913962-43913981 | None:intergenic | 45.0% | |
| AACTGTCCTCTCTCTTTCTC+TGG | + | Chr7:43915255-43915274 | MsG0780038309.01.T01:intron | 45.0% | |
| AAGGTCACAGGGCACATAAT+GGG | - | Chr7:43916070-43916089 | None:intergenic | 45.0% | |
| ACGACAGTGCTTATGGAAAG+AGG | + | Chr7:43917133-43917152 | MsG0780038309.01.T01:CDS | 45.0% | |
| ACTTGTTTGGTCCCTGTCTT+TGG | + | Chr7:43916484-43916503 | MsG0780038309.01.T01:intron | 45.0% | |
| AGAAAAGCCTTGACCTTTGG+TGG | - | Chr7:43913919-43913938 | None:intergenic | 45.0% | |
| ATGAAGGAGAAGACTTGTGC+TGG | + | Chr7:43914063-43914082 | MsG0780038309.01.T01:CDS | 45.0% | |
| ATGGAGTGGATCGATGTTCT+CGG | - | Chr7:43913874-43913893 | None:intergenic | 45.0% | |
| CATGTATATAACCCACACCG+TGG | - | Chr7:43914639-43914658 | None:intergenic | 45.0% | |
| CGACAGTGCTTATGGAAAGA+GGG | + | Chr7:43917134-43917153 | MsG0780038309.01.T01:CDS | 45.0% | |
| CGATAAATCCAACATGCCTG+CGG | - | Chr7:43917005-43917024 | None:intergenic | 45.0% | |
| CGCAGGCATGTTGGATTTAT+CGG | + | Chr7:43917003-43917022 | MsG0780038309.01.T01:CDS | 45.0% | |
| CTATCGCTATCGAGTCTAAG+GGG | - | Chr7:43916826-43916845 | None:intergenic | 45.0% | |
| GACATGTCACCTTTGTGCAA+TGG | + | Chr7:43914900-43914919 | MsG0780038309.01.T01:intron | 45.0% | |
| GACTTCCTTCATGGCTTACA+GGG | + | Chr7:43917083-43917102 | MsG0780038309.01.T01:intron | 45.0% | |
| GATGTTCCTGACTTCCTTCA+TGG | + | Chr7:43917074-43917093 | MsG0780038309.01.T01:intron | 45.0% | |
| TGACTTCCTTCATGGCTTAC+AGG | + | Chr7:43917082-43917101 | MsG0780038309.01.T01:intron | 45.0% | |
| TGAGTCGTTGTGGAATGAGA+AGG | + | Chr7:43915908-43915927 | MsG0780038309.01.T01:CDS | 45.0% | |
| TGATCCTAGAACTGACCATC+AGG | + | Chr7:43915039-43915058 | MsG0780038309.01.T01:CDS | 45.0% | |
| TGTAAGCCATGAAGGAAGTC+AGG | - | Chr7:43917083-43917102 | None:intergenic | 45.0% | |
| TTCACCTGATGGTCAGTTCT+AGG | - | Chr7:43915046-43915065 | None:intergenic | 45.0% | |
| ! | AGGATAACGGTTTCACCTGA+TGG | - | Chr7:43915057-43915076 | None:intergenic | 45.0% |
| ! | TTTGGCGACTTTTGTGACCA+CGG | + | Chr7:43914619-43914638 | MsG0780038309.01.T01:CDS | 45.0% |
| !! | ACTGGTGTTGCTTCTTGAAG+GGG | - | Chr7:43915662-43915681 | None:intergenic | 45.0% |
| !! | ATCTCTTGGTGCTTTGACTC+GGG | + | Chr7:43916977-43916996 | MsG0780038309.01.T01:CDS | 45.0% |
| !! | CACTGGTGTTGCTTCTTGAA+GGG | - | Chr7:43915663-43915682 | None:intergenic | 45.0% |
| !! | TCACTGGTGTTGCTTCTTGA+AGG | - | Chr7:43915664-43915683 | None:intergenic | 45.0% |
| !! | TGATTTCTTGGAGGTGTCAC+TGG | - | Chr7:43915680-43915699 | None:intergenic | 45.0% |
| !!! | GCTTTTCTCGCTGTTGTTTC+CGG | + | Chr7:43913931-43913950 | MsG0780038309.01.T01:CDS | 45.0% |
| AAGCTTCGGCACCAGAATAC+AGG | + | Chr7:43916185-43916204 | MsG0780038309.01.T01:CDS | 50.0% | |
| ACGACTCACCGTGTCGAATA+AGG | - | Chr7:43915896-43915915 | None:intergenic | 50.0% | |
| AGGTCACAGGGCACATAATG+GGG | - | Chr7:43916069-43916088 | None:intergenic | 50.0% | |
| CAAAGCTGCCTCATCTGAGT+TGG | - | Chr7:43915871-43915890 | None:intergenic | 50.0% | |
| CACAATTCCTCTGGCCAAAG+CGG | - | Chr7:43915582-43915601 | None:intergenic | 50.0% | |
| CTTCTTGAAGGGGACAACAC+TGG | - | Chr7:43915652-43915671 | None:intergenic | 50.0% | |
| GACCGTGCAATTCAGCAGTT+TGG | + | Chr7:43916142-43916161 | MsG0780038309.01.T01:CDS | 50.0% | |
| GATCCACTCCATCTCCACAT+GGG | + | Chr7:43913882-43913901 | MsG0780038309.01.T01:CDS | 50.0% | |
| GCGAGAAAAGCCTTGACCTT+TGG | - | Chr7:43913922-43913941 | None:intergenic | 50.0% | |
| GGCCAGTTACATGGAAGAGA+AGG | + | Chr7:43914676-43914695 | MsG0780038309.01.T01:CDS | 50.0% | |
| GGGTTACCAGAGAAAGAGAG+AGG | - | Chr7:43915264-43915283 | None:intergenic | 50.0% | |
| TCAGTGAGGATGAGAAGACG+AGG | - | Chr7:43915022-43915041 | None:intergenic | 50.0% | |
| ! | GACTTTTGTGACCACGGTGT+GGG | + | Chr7:43914625-43914644 | MsG0780038309.01.T01:CDS | 50.0% |
| !! | GGTCAGTTCTAGGATCAGTG+AGG | - | Chr7:43915036-43915055 | None:intergenic | 50.0% |
| !! | TCTCGCTGTTGTTTCCGGTA+TGG | + | Chr7:43913936-43913955 | MsG0780038309.01.T01:CDS | 50.0% |
| !! | TCTCTTGGTGCTTTGACTCG+GGG | + | Chr7:43916978-43916997 | MsG0780038309.01.T01:CDS | 50.0% |
| ACTCCATCTCCACATGGGTC+AGG | + | Chr7:43913887-43913906 | MsG0780038309.01.T01:CDS | 55.0% | |
| ATTGCACGGTCAGCACTCCA+TGG | - | Chr7:43916133-43916152 | None:intergenic | 55.0% | |
| CCTTCATGGCTTACAGGGCT+GGG | + | Chr7:43917088-43917107 | MsG0780038309.01.T01:intron | 55.0% | |
| CGATCCACTCCATCTCCACA+TGG | + | Chr7:43913881-43913900 | MsG0780038309.01.T01:CDS | 55.0% | |
| GAGAACAAGAGCGGCCATAC+CGG | - | Chr7:43913953-43913972 | None:intergenic | 55.0% | |
| GAGAAGACGAGGCTCACTGA+AGG | - | Chr7:43915011-43915030 | None:intergenic | 55.0% | |
| GAGTGGATCGATGTTCTCGG+AGG | - | Chr7:43913871-43913890 | None:intergenic | 55.0% | |
| GCGACAACCACCAAAGGTCA+AGG | + | Chr7:43913909-43913928 | MsG0780038309.01.T01:CDS | 55.0% | |
| GCTGAAGCTGTTCACTCGCT+TGG | + | Chr7:43914015-43914034 | MsG0780038309.01.T01:CDS | 55.0% | |
| TCCTTCATGGCTTACAGGGC+TGG | + | Chr7:43917087-43917106 | MsG0780038309.01.T01:intron | 55.0% | |
| TGACCCATGTGGAGATGGAG+TGG | - | Chr7:43913888-43913907 | None:intergenic | 55.0% | |
| TTCGACACGGTGAGTCGTTG+TGG | + | Chr7:43915898-43915917 | MsG0780038309.01.T01:CDS | 55.0% | |
| ! | CGACTTTTGTGACCACGGTG+TGG | + | Chr7:43914624-43914643 | MsG0780038309.01.T01:CDS | 55.0% |
| CCCAGCCCTGTAAGCCATGA+AGG | - | Chr7:43917091-43917110 | None:intergenic | 60.0% | |
| GGTCAGGCGACAACCACCAA+AGG | + | Chr7:43913778-43913797 | MsG0780038309.01.T01:CDS | 60.0% | |
| TCGCCTGACCCATGTGGAGA+TGG | - | Chr7:43913893-43913912 | None:intergenic | 60.0% | |
| TGGTTGTCGCCTGACCCATG+TGG | - | Chr7:43913899-43913918 | None:intergenic | 60.0% | |
| ! | CTGATAGCCGCTTTGGCCAG+AGG | + | Chr7:43915572-43915591 | MsG0780038309.01.T01:CDS | 60.0% |
| !! | TGCTTTGACTCGGGGACCGC+AGG | + | Chr7:43916986-43917005 | MsG0780038309.01.T01:CDS | 65.0% |
| CTCGGGGACCGCAGGCATGT+TGG | + | Chr7:43916994-43917013 | MsG0780038309.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 43913775 | 43917209 | 43913775 | ID=MsG0780038309.01;Name=MsG0780038309.01 |
| Chr7 | mRNA | 43913775 | 43917209 | 43913775 | ID=MsG0780038309.01.T01;Parent=MsG0780038309.01;Name=MsG0780038309.01.T01;_AED=0.81;_eAED=0.81;_QI=0|0|0|0.25|0.71|0.75|8|0|437 |
| Chr7 | exon | 43913775 | 43914084 | 43913775 | ID=MsG0780038309.01.T01:exon:15744;Parent=MsG0780038309.01.T01 |
| Chr7 | exon | 43914522 | 43914789 | 43914522 | ID=MsG0780038309.01.T01:exon:15745;Parent=MsG0780038309.01.T01 |
| Chr7 | exon | 43915015 | 43915060 | 43915015 | ID=MsG0780038309.01.T01:exon:15746;Parent=MsG0780038309.01.T01 |
| Chr7 | exon | 43915520 | 43915751 | 43915520 | ID=MsG0780038309.01.T01:exon:15747;Parent=MsG0780038309.01.T01 |
| Chr7 | exon | 43915877 | 43916010 | 43915877 | ID=MsG0780038309.01.T01:exon:15748;Parent=MsG0780038309.01.T01 |
| Chr7 | exon | 43916100 | 43916206 | 43916100 | ID=MsG0780038309.01.T01:exon:15749;Parent=MsG0780038309.01.T01 |
| Chr7 | exon | 43916914 | 43917024 | 43916914 | ID=MsG0780038309.01.T01:exon:15750;Parent=MsG0780038309.01.T01 |
| Chr7 | exon | 43917104 | 43917209 | 43917104 | ID=MsG0780038309.01.T01:exon:15751;Parent=MsG0780038309.01.T01 |
| Chr7 | CDS | 43913775 | 43914084 | 43913775 | ID=MsG0780038309.01.T01:cds;Parent=MsG0780038309.01.T01 |
| Chr7 | CDS | 43914522 | 43914789 | 43914522 | ID=MsG0780038309.01.T01:cds;Parent=MsG0780038309.01.T01 |
| Chr7 | CDS | 43915015 | 43915060 | 43915015 | ID=MsG0780038309.01.T01:cds;Parent=MsG0780038309.01.T01 |
| Chr7 | CDS | 43915520 | 43915751 | 43915520 | ID=MsG0780038309.01.T01:cds;Parent=MsG0780038309.01.T01 |
| Chr7 | CDS | 43915877 | 43916010 | 43915877 | ID=MsG0780038309.01.T01:cds;Parent=MsG0780038309.01.T01 |
| Chr7 | CDS | 43916100 | 43916206 | 43916100 | ID=MsG0780038309.01.T01:cds;Parent=MsG0780038309.01.T01 |
| Chr7 | CDS | 43916914 | 43917024 | 43916914 | ID=MsG0780038309.01.T01:cds;Parent=MsG0780038309.01.T01 |
| Chr7 | CDS | 43917104 | 43917209 | 43917104 | ID=MsG0780038309.01.T01:cds;Parent=MsG0780038309.01.T01 |
| Gene Sequence |
| Protein sequence |
