AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030613.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030613.01.T01 MTR_6g007767 98.671 602 8 0 114 715 42 643 0.0 1238
MsG0680030613.01.T01 MTR_6g007767 98.674 528 7 0 114 641 42 569 0.0 1085
MsG0680030613.01.T01 MTR_6g007770 82.702 607 105 0 109 715 15 621 0.0 1073
MsG0680030613.01.T01 MTR_6g007767 98.819 508 6 0 208 715 1 508 0.0 1042
MsG0680030613.01.T01 MTR_6g007763 81.157 605 111 2 114 715 40 644 0.0 1031
MsG0680030613.01.T01 MTR_6g007767 98.945 379 4 0 114 492 42 420 0.0 787
MsG0680030613.01.T01 MTR_6g007767 98.421 380 6 0 114 493 42 421 0.0 785
MsG0680030613.01.T01 MTR_8g106800 62.126 602 221 2 114 712 32 629 0.0 777
MsG0680030613.01.T01 MTR_8g022750 61.538 65 25 0 1 65 116 180 1.93e-17 84.0
MsG0680030613.01.T01 MTR_8g039080 45.783 83 44 1 23 104 1 83 1.43e-15 77.0
MsG0680030613.01.T01 MTR_6g453270 45.122 82 44 1 3 84 166 246 2.02e-14 76.3
MsG0680030613.01.T01 MTR_8g028785 46.250 80 42 1 3 82 148 226 6.12e-14 74.3
MsG0680030613.01.T01 MTR_4g046027 82.051 39 7 0 33 71 55 93 4.06e-13 68.6
MsG0680030613.01.T01 MTR_1g081030 40.580 69 41 0 2 70 16 84 1.02e-11 61.6
MsG0680030613.01.T01 MTR_2g054740 33.000 100 63 1 2 101 68 163 1.10e-11 64.3
MsG0680030613.01.T01 MTR_8g006720 36.082 97 61 1 3 98 173 269 4.22e-11 64.7
MsG0680030613.01.T01 MTR_4g029360 38.158 76 47 0 7 82 2 77 5.77e-11 63.5
MsG0680030613.01.T01 MTR_2g017975 35.870 92 59 0 1 92 47 138 6.92e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030613.01.T01 AT3G01420 73.798 603 157 1 114 715 37 639 0.0 945
MsG0680030613.01.T01 AT1G73680 62.833 600 219 3 114 712 32 628 0.0 791
MsG0680030613.01.T01 AT1G73680 61.576 609 221 5 114 712 32 637 0.0 776
MsG0680030613.01.T01 AT1G73680 63.514 518 188 1 195 712 3 519 0.0 696
MsG0680030613.01.T01 AT1G73680 64.000 475 170 1 238 712 1 474 0.0 648

Find 191 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGATCAATCACATCCTTTA+AGG 0.154305 6:-6072466 None:intergenic
TCACGATGATGTGGAGTATT+TGG 0.155887 6:+6064890 MsG0680030613.01.T01:CDS
AATTAACTAGTGTATTTATC+TGG 0.158854 6:+6072955 MsG0680030613.01.T01:three_prime_UTR
TTGCCATACTCTTTGATTAA+TGG 0.175379 6:-6071137 None:intergenic
TTTGGCGTGATGTTAATTTA+TGG 0.177488 6:+6064770 MsG0680030613.01.T01:CDS
CTTCAAGTGCTTTCTCTGTT+TGG 0.185040 6:+6072523 MsG0680030613.01.T01:CDS
TCATGATACCTATCTCTAAA+TGG 0.192004 6:+6071798 MsG0680030613.01.T01:CDS
CACTTATGTCTACCTCTTCT+TGG 0.192204 6:-6065092 None:intergenic
TCCACTCAATATGGAATTTC+CGG 0.200794 6:-6070967 None:intergenic
ATTTGATAATTGCTAGATTT+TGG 0.207259 6:+6073142 MsG0680030613.01.T01:three_prime_UTR
CATTGATGAGATTGTATTCT+TGG 0.207586 6:-6067759 None:intergenic
TAAAACTTTGTTTGTCCTTT+TGG 0.212105 6:-6073109 None:intergenic
ATAATTAAATGATCAAAATT+TGG 0.228915 6:+6072987 MsG0680030613.01.T01:three_prime_UTR
TTGAACTCCTATCTCTATTA+AGG 0.233218 6:-6071439 None:intergenic
GTCCTAGTGCTATGCAAATT+TGG 0.263400 6:+6064752 None:intergenic
AAGAAATTCAAGGACACATT+TGG 0.271505 6:+6070939 MsG0680030613.01.T01:CDS
TTCAAGTGCTTTCTCTGTTT+GGG 0.278891 6:+6072524 MsG0680030613.01.T01:CDS
CTAGGAACACGCAAGTAAAT+TGG 0.282392 6:-6072576 None:intergenic
GAACACTACTGAAACCTTAA+AGG 0.285105 6:+6072452 MsG0680030613.01.T01:CDS
CATTGGTTTGCAACTTCTCT+TGG 0.288806 6:-6069824 None:intergenic
CATTGTGTTCTAGAACAAAA+AGG 0.289303 6:-6070271 None:intergenic
AATTCCTCTGTTAAAGAGTA+TGG 0.292425 6:-6071026 None:intergenic
TGGAAGCAATCAAGAAGTTT+TGG 0.297614 6:+6070118 MsG0680030613.01.T01:CDS
GAAGATGGAACAGCAATTTC+AGG 0.297628 6:+6070206 MsG0680030613.01.T01:CDS
CTTGTGGGGCCCTAGAACTT+TGG 0.301876 6:+6071490 MsG0680030613.01.T01:CDS
CCATTGACAAGTTGGGAATA+TGG 0.315604 6:+6067680 MsG0680030613.01.T01:CDS
GGAAGCCAAGGATCTTTCTT+TGG 0.332821 6:+6067877 MsG0680030613.01.T01:CDS
TTGGCGTGATGTTAATTTAT+GGG 0.337737 6:+6064771 MsG0680030613.01.T01:CDS
GGAATAGGGTTGTGTTTGTT+TGG 0.345383 6:-6072555 None:intergenic
AAATCTTCCCATTTAGAGAT+AGG 0.346188 6:-6071806 None:intergenic
GCCCACAAATCCACTCAATA+TGG 0.346533 6:-6070976 None:intergenic
TAGCAAGATATAACCAATTC+AGG 0.346766 6:+6071765 MsG0680030613.01.T01:CDS
ATATAAATGATGCAGTTTAC+AGG 0.348942 6:+6071726 MsG0680030613.01.T01:intron
GGCTAATATACTTGGCCATT+AGG 0.361626 6:+6067725 MsG0680030613.01.T01:CDS
ATTAATGGTGGAGATTTGTT+AGG 0.367829 6:-6071122 None:intergenic
ACATAAGGAATTTGAAACTT+TGG 0.369558 6:+6064914 MsG0680030613.01.T01:CDS
CAGGTGACATTCGTAATAGT+TGG 0.372460 6:+6070225 MsG0680030613.01.T01:CDS
ATGGATAGTTCCAAAGTTCT+AGG 0.375628 6:-6071500 None:intergenic
ACACGCAAGTAAATTGGAAT+AGG 0.378099 6:-6072570 None:intergenic
AGGGATGGAAGTGTGATATA+TGG 0.378363 6:+6070098 MsG0680030613.01.T01:intron
GTGGCCACCACCATTGGGTC+TGG 0.383776 6:-6068816 None:intergenic
TTTATGGGATTCAATTGATA+AGG 0.387667 6:+6064786 MsG0680030613.01.T01:CDS
TCTAGAGAGGAGAACATATA+AGG 0.388770 6:+6068845 MsG0680030613.01.T01:CDS
TTGTTGCAACAGAGCATAAA+TGG 0.396461 6:-6064839 None:intergenic
TCTTCCTTCTCATGGCATCT+AGG 0.400584 6:+6071963 MsG0680030613.01.T01:CDS
AGAAATTCAAGGACACATTT+GGG 0.403597 6:+6070940 MsG0680030613.01.T01:CDS
TCTCTCAAATGCAGGAAATC+AGG 0.404427 6:-6071080 None:intergenic
TTGGAGGCATGCGCGCCAAT+TGG 0.404437 6:+6070671 MsG0680030613.01.T01:CDS
TGTACGGATGTTTGCATGTC+CGG 0.406257 6:-6069912 None:intergenic
ACCTCTTTCTTCTGATCCAC+AGG 0.406789 6:-6067913 None:intergenic
AAGAACTTGAAAGATTTAAG+TGG 0.407097 6:-6069848 None:intergenic
TGAATAGTCCTCTCCTGAAT+TGG 0.412126 6:-6071778 None:intergenic
AAGCTCCACAGTCCAATCTA+TGG 0.412136 6:-6070629 None:intergenic
TATATTAGCCCTAAGAAAAC+AGG 0.412840 6:-6067712 None:intergenic
ACACTGAAAAGGGTTTGAAA+TGG 0.417583 6:+6072427 MsG0680030613.01.T01:CDS
AAGATCTAACCATGTGGACT+TGG 0.421967 6:+6071566 MsG0680030613.01.T01:CDS
AAAGTATTGGAAGAGATATA+TGG 0.422632 6:+6071851 MsG0680030613.01.T01:CDS
TCCATATTGAGTGGATTTGT+GGG 0.422969 6:+6070975 MsG0680030613.01.T01:CDS
TTTCTTAGGGCTAATATACT+TGG 0.423557 6:+6067717 MsG0680030613.01.T01:CDS
CATGGCAGAGAAGAAGATAA+AGG 0.425013 6:+6071910 MsG0680030613.01.T01:CDS
GGATGTTTGCATGTCCGGTC+TGG 0.429303 6:-6069907 None:intergenic
AAGGACACATTTGGGCATTC+CGG 0.430582 6:+6070948 MsG0680030613.01.T01:CDS
TGAGGAGACATACACTGAAA+AGG 0.432708 6:+6072416 MsG0680030613.01.T01:CDS
TTAATGTGATTGCAGCATCT+TGG 0.433235 6:+6068883 MsG0680030613.01.T01:CDS
GGAAGATTTAACAGATGATA+AGG 0.434509 6:+6071820 MsG0680030613.01.T01:CDS
CATGATACCTATCTCTAAAT+GGG 0.437524 6:+6071799 MsG0680030613.01.T01:CDS
TTCCATATTGAGTGGATTTG+TGG 0.438738 6:+6070974 MsG0680030613.01.T01:CDS
CACTGAAAAGGGTTTGAAAT+GGG 0.443308 6:+6072428 MsG0680030613.01.T01:CDS
ACACGATTGGATAGATCATA+TGG 0.443336 6:+6068920 MsG0680030613.01.T01:CDS
CCCGATCACGTCTCCTTGAA+AGG 0.443336 6:-6072891 None:intergenic
AGGTGACATTCGTAATAGTT+GGG 0.444834 6:+6070226 MsG0680030613.01.T01:CDS
AGATCTTCATCTTCCAAGTC+CGG 0.445170 6:-6070556 None:intergenic
CAAAGATTCACACCATAGAT+TGG 0.446671 6:+6070617 MsG0680030613.01.T01:CDS
TTTGTTAAAACATCCTTTCA+AGG 0.448438 6:+6072878 MsG0680030613.01.T01:three_prime_UTR
AGGTTAACACACCTTCTTGA+TGG 0.453792 6:+6064973 MsG0680030613.01.T01:CDS
GAGAGACACATCTGTCTCTC+CGG 0.454740 6:+6071097 MsG0680030613.01.T01:CDS
CTAACTTCAATTGATTAACT+AGG 0.455907 6:-6072594 None:intergenic
CTTAAAACCGACACTTTGCT+TGG 0.463016 6:+6070652 MsG0680030613.01.T01:CDS
GAGAAGACCTTAATAGAGAT+AGG 0.466732 6:+6071432 MsG0680030613.01.T01:CDS
ACTCACAAAATACCATTCAT+TGG 0.467417 6:+6065063 MsG0680030613.01.T01:CDS
CTTCCATCAGCAGTTCTGTA+TGG 0.468141 6:-6067826 None:intergenic
ATTAACTAGTGTATTTATCT+GGG 0.469613 6:+6072956 MsG0680030613.01.T01:three_prime_UTR
AGTCCGATCAAATCGTTCAT+AGG 0.472468 6:-6071402 None:intergenic
TGTGGAGTATTTGGAACATA+AGG 0.472698 6:+6064899 MsG0680030613.01.T01:CDS
GAACAACACCTGTAGGGGTT+AGG 0.472979 6:+6067785 MsG0680030613.01.T01:CDS
TAATGTTTATGTGTATGTAT+TGG 0.473234 6:+6072656 MsG0680030613.01.T01:three_prime_UTR
TTAGAAGGAATACCCGGACT+TGG 0.474562 6:+6070543 MsG0680030613.01.T01:intron
TTCTGCCAAAGAAAGATCCT+TGG 0.475376 6:-6067882 None:intergenic
TAAGGAAGTAATCAAAGTAT+TGG 0.476469 6:+6071838 MsG0680030613.01.T01:CDS
TGTACACTCCATTGACAAGT+TGG 0.477814 6:+6067672 MsG0680030613.01.T01:CDS
CAATGGGTCACCAAGCTTGT+GGG 0.479439 6:+6071475 MsG0680030613.01.T01:CDS
AGAGACACATCTGTCTCTCC+GGG 0.481319 6:+6071098 MsG0680030613.01.T01:CDS
TGAAAGATTTAAGTGGGCAT+TGG 0.483896 6:-6069841 None:intergenic
GAGGAGACATACACTGAAAA+GGG 0.487965 6:+6072417 MsG0680030613.01.T01:CDS
CCATATTCCCAACTTGTCAA+TGG 0.488054 6:-6067680 None:intergenic
GAACTTCTTCATAATGAAGA+TGG 0.489125 6:+6070191 MsG0680030613.01.T01:CDS
TGATCAAAATTTGGTATGCA+TGG 0.493061 6:+6072996 MsG0680030613.01.T01:three_prime_UTR
TTCAATTCATGATACACGAT+TGG 0.494349 6:+6068907 MsG0680030613.01.T01:CDS
ATGGCAGAGAAGAAGATAAA+GGG 0.494420 6:+6071911 MsG0680030613.01.T01:CDS
AAGACAAAGGAAATCCCAAC+TGG 0.494544 6:+6069872 MsG0680030613.01.T01:CDS
ATAGGGTTGTGTTTGTTTGG+TGG 0.495064 6:-6072552 None:intergenic
TCAATGGGTCACCAAGCTTG+TGG 0.496325 6:+6071474 MsG0680030613.01.T01:CDS
TCTTTATCGCTATGCTAGAC+TGG 0.496710 6:+6070576 MsG0680030613.01.T01:CDS
CCATACTCTTTGATTAATGG+TGG 0.497692 6:-6071134 None:intergenic
AATGAAAATGCTGGAAGCCA+AGG 0.497779 6:+6067865 MsG0680030613.01.T01:CDS
CACGCAAGTAAATTGGAATA+GGG 0.499528 6:-6072569 None:intergenic
GACATTCGTAATAGTTGGGC+TGG 0.499613 6:+6070230 MsG0680030613.01.T01:CDS
AAAACCGACACTTTGCTTGG+AGG 0.500796 6:+6070655 MsG0680030613.01.T01:CDS
GTACACTCCATTGACAAGTT+GGG 0.500923 6:+6067673 MsG0680030613.01.T01:CDS
CCTTTCAAGGAGACGTGATC+GGG 0.504575 6:+6072891 MsG0680030613.01.T01:three_prime_UTR
TAACACACCTTCTTGATGGT+TGG 0.508319 6:+6064977 MsG0680030613.01.T01:CDS
CATCTGCATTATGTGGTACT+AGG 0.511101 6:-6071536 None:intergenic
GAATACAATCTCATCAATGT+TGG 0.513749 6:+6067763 MsG0680030613.01.T01:CDS
GTTCTAGGGCCCCACAAGCT+TGG 0.514270 6:-6071485 None:intergenic
GTTCTGTATGGAAAATCAGT+AGG 0.514586 6:-6067814 None:intergenic
GGTGGAGATTTGTTAGGCCC+CGG 0.515715 6:-6071116 None:intergenic
TCTGTGCCATCTGCATTATG+TGG 0.516360 6:-6071543 None:intergenic
GAGGAGCTTGATGTGCTAGT+AGG 0.521430 6:+6071884 MsG0680030613.01.T01:CDS
TTTCCATACAGAACTGCTGA+TGG 0.525073 6:+6067823 MsG0680030613.01.T01:CDS
TTTCAAGTTCTTCAAGACAA+AGG 0.527235 6:+6069859 MsG0680030613.01.T01:CDS
GATCTTCATCTTCCAAGTCC+GGG 0.528153 6:-6070555 None:intergenic
AGAACTTGAAAGATTTAAGT+GGG 0.531545 6:-6069847 None:intergenic
ATTCAATTGATAAGGCTCTC+AGG 0.533963 6:+6064794 MsG0680030613.01.T01:CDS
ATGTTGGAACAACACCTGTA+GGG 0.533992 6:+6067779 MsG0680030613.01.T01:CDS
CAGATGTGTCTCTCAAATGC+AGG 0.534010 6:-6071088 None:intergenic
TGCAGGAAATCAGGCAGGAG+TGG 0.534116 6:-6071071 None:intergenic
ATTATTGGGAAAGAAATTCA+AGG 0.534335 6:+6070929 MsG0680030613.01.T01:CDS
TCCTTTCAAGGAGACGTGAT+CGG 0.536346 6:+6072890 MsG0680030613.01.T01:three_prime_UTR
TCCGGAAATTCCATATTGAG+TGG 0.537092 6:+6070966 MsG0680030613.01.T01:CDS
TTGGTGAAGATGTCTCCTAA+TGG 0.538800 6:-6067740 None:intergenic
GGGTTTGACCTAACCCCTAC+AGG 0.542080 6:-6067793 None:intergenic
TGCTGTTTGTGATTCTCTCA+AGG 0.545481 6:+6070292 MsG0680030613.01.T01:CDS
GAAGAATGAAACGAATGCTC+AGG 0.547841 6:+6064942 MsG0680030613.01.T01:CDS
ACTAGGTCTCTGAGCCATGA+TGG 0.548069 6:-6071519 None:intergenic
ACACCTTCTTGATGGTTGGA+AGG 0.556047 6:+6064981 MsG0680030613.01.T01:CDS
AACTTTGGAACTATCCATCA+TGG 0.560304 6:+6071505 MsG0680030613.01.T01:CDS
AATGTTGGAACAACACCTGT+AGG 0.566767 6:+6067778 MsG0680030613.01.T01:CDS
TGGACCTCATAGAAACCAGT+TGG 0.569869 6:-6069887 None:intergenic
AACGATTTGATCGGACTACA+AGG 0.570673 6:+6071408 MsG0680030613.01.T01:CDS
ATTCTTACCACCAAGGTGTA+CGG 0.577040 6:-6069928 None:intergenic
GTACTTTACAGGAGGCTAGA+GGG 0.578298 6:+6072366 MsG0680030613.01.T01:intron
AATCCCAACTGGTTTCTATG+AGG 0.581470 6:+6069883 MsG0680030613.01.T01:CDS
TCAAATGCAGGAAATCAGGC+AGG 0.582700 6:-6071076 None:intergenic
AATGGGTCACCAAGCTTGTG+GGG 0.585071 6:+6071476 MsG0680030613.01.T01:CDS
CCCTGTGGATCAGAAGAAAG+AGG 0.587403 6:+6067912 MsG0680030613.01.T01:CDS
ATGAAGAGAGCAGAAAATCA+TGG 0.587895 6:+6070999 MsG0680030613.01.T01:CDS
TGGATAGTTCCAAAGTTCTA+GGG 0.588238 6:-6071499 None:intergenic
TATAAATGATGCAGTTTACA+GGG 0.588921 6:+6071727 MsG0680030613.01.T01:intron
CAAGAGCAGCCAAGTCCACA+TGG 0.589521 6:-6071575 None:intergenic
AGGAGAACATATAAGGACAC+AGG 0.590610 6:+6068852 MsG0680030613.01.T01:CDS
GGACCTCATAGAAACCAGTT+GGG 0.590777 6:-6069886 None:intergenic
TGATGTGCTAGTAGGTCTCA+TGG 0.592023 6:+6071892 MsG0680030613.01.T01:CDS
CGAATGCTCAGGTCGTTGAA+AGG 0.592991 6:+6064953 MsG0680030613.01.T01:CDS
TGGTAAAATCAAAATATCAA+AGG 0.594234 6:+6070163 MsG0680030613.01.T01:CDS
TTCTGTATGGAAAATCAGTA+GGG 0.594749 6:-6067813 None:intergenic
TTTACCTAGATGCCATGAGA+AGG 0.594996 6:-6071967 None:intergenic
TCATATGGAAGACACTCAGC+AGG 0.595518 6:+6068935 MsG0680030613.01.T01:CDS
AAAATCAAAATATCAAAGGA+AGG 0.597631 6:+6070167 MsG0680030613.01.T01:CDS
GCCCTAAGAAAACAGGCATA+CGG 0.598987 6:-6067705 None:intergenic
GGTTTCTATGAGGTCCAGAC+CGG 0.599406 6:+6069893 MsG0680030613.01.T01:CDS
CAAACATCCGTACACCTTGG+TGG 0.599441 6:+6069921 MsG0680030613.01.T01:CDS
CCTTCTTGATGGTTGGAAGG+AGG 0.599967 6:+6064984 MsG0680030613.01.T01:CDS
TAGAAATATTCTTACCACCA+AGG 0.600051 6:-6069935 None:intergenic
AAAGTGAGGACTTTCAAAGA+TGG 0.602146 6:+6070143 MsG0680030613.01.T01:CDS
ATTCCTATGAACGATTTGAT+CGG 0.603016 6:+6071399 MsG0680030613.01.T01:CDS
TGTACTTTACAGGAGGCTAG+AGG 0.608230 6:+6072365 MsG0680030613.01.T01:intron
GTTTACAGGGATAGAGAGAG+AGG 0.610226 6:+6071740 MsG0680030613.01.T01:intron
ATGCAAACATCCGTACACCT+TGG 0.610700 6:+6069918 MsG0680030613.01.T01:CDS
CCTCCTTCCAACCATCAAGA+AGG 0.610822 6:-6064984 None:intergenic
GATATATGGTGATGATGTTG+AGG 0.614314 6:+6071865 MsG0680030613.01.T01:CDS
CAATCAAATTCTTGCCACTG+CGG 0.618670 6:-6065017 None:intergenic
CTAGTACCACATAATGCAGA+TGG 0.621520 6:+6071537 MsG0680030613.01.T01:CDS
TGTTGGAACAACACCTGTAG+GGG 0.624930 6:+6067780 MsG0680030613.01.T01:CDS
GAAACCAGACCCAATGGTGG+TGG 0.626280 6:+6068812 MsG0680030613.01.T01:CDS
ACTCTATTAGAAGGAATACC+CGG 0.629221 6:+6070537 MsG0680030613.01.T01:intron
TGGCAGAAACATTCTCCCTG+TGG 0.629915 6:+6067897 MsG0680030613.01.T01:CDS
AGTTCCATACTCTTTAACAG+AGG 0.635884 6:+6071022 MsG0680030613.01.T01:CDS
CCTCTTTCTTCTGATCCACA+GGG 0.636628 6:-6067912 None:intergenic
CATGCCTCCAAGCAAAGTGT+CGG 0.637781 6:-6070659 None:intergenic
TTTCACAAGCAACTACAATG+AGG 0.638322 6:+6072398 MsG0680030613.01.T01:CDS
GTTGTTGAAACCAGACCCAA+TGG 0.642194 6:+6068806 MsG0680030613.01.T01:intron
AGATATAACCAATTCAGGAG+AGG 0.663971 6:+6071770 MsG0680030613.01.T01:CDS
TGGCCACAAAACTTCTAGAG+AGG 0.664169 6:+6068832 MsG0680030613.01.T01:CDS
TAAAACAAATAAAACACTAG+CGG 0.671684 6:-6072774 None:intergenic
GGAGAACATATAAGGACACA+GGG 0.674169 6:+6068853 MsG0680030613.01.T01:CDS
TCTCAGGAGAAACTATAACA+TGG 0.686790 6:+6064810 MsG0680030613.01.T01:CDS
CACAGAAAGATCTAACCATG+TGG 0.707467 6:+6071560 MsG0680030613.01.T01:CDS
GAGACACATCTGTCTCTCCG+GGG 0.729877 6:+6071099 MsG0680030613.01.T01:CDS
GAGGCTAAGATTATCCGCAG+TGG 0.741704 6:+6065003 MsG0680030613.01.T01:CDS
TCACACCATAGATTGGACTG+TGG 0.755338 6:+6070624 MsG0680030613.01.T01:CDS
GTTGAAACCAGACCCAATGG+TGG 0.761180 6:+6068809 MsG0680030613.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTGTTAGTATTATAT+TGG + Chr6:6068012-6068031 MsG0680030613.01.T01:intron 10.0%
!! AGAAAATATTAGAAAATTTA+TGG - Chr6:6069585-6069604 None:intergenic 10.0%
!! ATAATTAAATGATCAAAATT+TGG + Chr6:6072987-6073006 MsG0680030613.01.T01:three_prime_UTR 10.0%
!! ATATAATAATATAAGGTTAT+TGG - Chr6:6069699-6069718 None:intergenic 10.0%
!! CAAAAAATATAAACAAAAAT+TGG + Chr6:6068150-6068169 MsG0680030613.01.T01:intron 10.0%
!! TATTGAATAATTAATGTATA+TGG - Chr6:6071277-6071296 None:intergenic 10.0%
!!! AAAAAAGATTATTTTTTTAG+GGG - Chr6:6073048-6073067 None:intergenic 10.0%
!!! ATCAATATGAATTTTTTTTA+AGG + Chr6:6065923-6065942 MsG0680030613.01.T01:intron 10.0%
!!! ATTACCATTAAAATTTTATA+AGG - Chr6:6072083-6072102 None:intergenic 10.0%
!!! GAAAATCTTTTTTTATATTT+AGG - Chr6:6071207-6071226 None:intergenic 10.0%
!!! TAAAATTTTAATGGTAATTT+TGG + Chr6:6072085-6072104 MsG0680030613.01.T01:intron 10.0%
!!! TAAACATTAATTTGAATATT+TGG + Chr6:6068992-6069011 MsG0680030613.01.T01:intron 10.0%
!!! TTTTTACCAAAAAAATTTAT+TGG + Chr6:6065641-6065660 MsG0680030613.01.T01:intron 10.0%
!!! TTTTTGTTTATATTTTTTGA+CGG - Chr6:6068149-6068168 None:intergenic 10.0%
!!! TTTTTTAAAAATTTTGTTTG+AGG + Chr6:6073062-6073081 MsG0680030613.01.T01:three_prime_UTR 10.0%
!!! TTTTTTTTCTTTTATAAGTA+TGG + Chr6:6066004-6066023 MsG0680030613.01.T01:intron 10.0%
!! AACTTATAATAAAATACGAA+GGG + Chr6:6066338-6066357 MsG0680030613.01.T01:intron 15.0%
!! AATGAAACTATATGATAATA+GGG + Chr6:6070079-6070098 MsG0680030613.01.T01:intron 15.0%
!! ACTTACACATAAAATAAAAA+TGG - Chr6:6071679-6071698 None:intergenic 15.0%
!! ATCTCAAAAAAGTTATTAAA+TGG + Chr6:6069667-6069686 MsG0680030613.01.T01:intron 15.0%
!! CAAATAAACAATTTGATATA+TGG - Chr6:6066630-6066649 None:intergenic 15.0%
!! TAAAATGTCATTAACTAATT+AGG + Chr6:6065849-6065868 MsG0680030613.01.T01:intron 15.0%
!! TAAAATTTGTCAATTATCTT+GGG + Chr6:6069296-6069315 MsG0680030613.01.T01:intron 15.0%
!! TAACTTATAATAAAATACGA+AGG + Chr6:6066337-6066356 MsG0680030613.01.T01:intron 15.0%
!! TACAAAATACAATATTATAG+AGG - Chr6:6072112-6072131 None:intergenic 15.0%
!! TAGATATAAAGTTTATTTCA+TGG - Chr6:6068091-6068110 None:intergenic 15.0%
!! TCTCAAAAAAGTTATTAAAT+GGG + Chr6:6069668-6069687 MsG0680030613.01.T01:intron 15.0%
!! TTAAAATTTGTCAATTATCT+TGG + Chr6:6069295-6069314 MsG0680030613.01.T01:intron 15.0%
!! TTTGATATAGAAAAACTATA+GGG - Chr6:6067043-6067062 None:intergenic 15.0%
!!! AATAAAATCTCTATTTTGTA+TGG + Chr6:6071365-6071384 MsG0680030613.01.T01:intron 15.0%
!!! ACCATTTCATAATTTTTTTA+GGG + Chr6:6071634-6071653 MsG0680030613.01.T01:intron 15.0%
!!! ACTAGTTTACTTTTTTTTAA+GGG - Chr6:6068115-6068134 None:intergenic 15.0%
!!! ATAGTTTTTTTTTTTGAAAG+AGG + Chr6:6065953-6065972 MsG0680030613.01.T01:intron 15.0%
!!! ATCATTTATCCTTTTTTTTA+AGG - Chr6:6065579-6065598 None:intergenic 15.0%
!!! ATGATTTTTCTTTTATTAGT+AGG - Chr6:6066812-6066831 None:intergenic 15.0%
!!! ATTTGAAATGATAGTTTTAA+TGG - Chr6:6067134-6067153 None:intergenic 15.0%
!!! CAATATGAATTTTTTTCTTT+TGG + Chr6:6065769-6065788 MsG0680030613.01.T01:intron 15.0%
!!! CTTTTATATCTAAATGTTTA+GGG + Chr6:6072298-6072317 MsG0680030613.01.T01:intron 15.0%
!!! GTTTTTTTTTTTTTACCAAA+AGG + Chr6:6073094-6073113 MsG0680030613.01.T01:three_prime_UTR 15.0%
!!! TACTAGTTTACTTTTTTTTA+AGG - Chr6:6068116-6068135 None:intergenic 15.0%
!!! TAGCATTTTCAATTATTTTT+TGG - Chr6:6065882-6065901 None:intergenic 15.0%
!!! TAGTCCTTATAAAATTTTAA+TGG + Chr6:6072076-6072095 MsG0680030613.01.T01:intron 15.0%
!!! TAGTTTTTTTTTTTGAAAGA+GGG + Chr6:6065954-6065973 MsG0680030613.01.T01:intron 15.0%
!!! TATTTACTAAAGTATCAAAA+TGG + Chr6:6067502-6067521 MsG0680030613.01.T01:intron 15.0%
!!! TTCTTTAACTTTTAAAAGAT+TGG + Chr6:6072826-6072845 MsG0680030613.01.T01:three_prime_UTR 15.0%
!!! TTTATTTTTTATAAAACTGG+TGG - Chr6:6065686-6065705 None:intergenic 15.0%
!!! TTTGAAATGATAGTTTTAAT+GGG - Chr6:6067133-6067152 None:intergenic 15.0%
!! AAAACATATTTAACCCTAAA+AGG - Chr6:6069987-6069968 None:intergenic 20.0%
!! AAAATCAAAATATCAAAGGA+AGG + Chr6:6070167-6070186 MsG0680030613.01.T01:CDS 20.0%
!! AAAATGTGTCAAATACATTA+TGG - Chr6:6065530-6065549 None:intergenic 20.0%
!! AAATGAGTATTAAAGAAAAG+TGG - Chr6:6069464-6069483 None:intergenic 20.0%
!! AATCAACATTGTTAAATTGA+AGG - Chr6:6065292-6065311 None:intergenic 20.0%
!! AATTAACTAGTGTATTTATC+TGG + Chr6:6072955-6072974 MsG0680030613.01.T01:three_prime_UTR 20.0%
!! ACATTTAGATATAAAAGGTA+CGG - Chr6:6072295-6072314 None:intergenic 20.0%
!! ACCCTAAAAAAATTATGAAA+TGG - Chr6:6071638-6071657 None:intergenic 20.0%
!! ATAAGTTAATGACATGATAA+TGG - Chr6:6069560-6069579 None:intergenic 20.0%
!! ATGTAATTAGTTAGTATAGT+TGG - Chr6:6067557-6067576 None:intergenic 20.0%
!! ATTAACTAGTGTATTTATCT+GGG + Chr6:6072956-6072975 MsG0680030613.01.T01:three_prime_UTR 20.0%
!! ATTCGATTTCTGATAATTAT+TGG - Chr6:6066151-6066170 None:intergenic 20.0%
!! ATTTAACCCTAAATTGTATA+TGG + Chr6:6069975-6069994 MsG0680030613.01.T01:intron 20.0%
!! ATTTATTCAATGAACTTGAA+AGG - Chr6:6071229-6071248 None:intergenic 20.0%
!! CATATATTTATATACTACCA+CGG - Chr6:6066585-6066604 None:intergenic 20.0%
!! CCTAAACATTTAGATATAAA+AGG - Chr6:6072300-6072319 None:intergenic 20.0%
!! GAATGAAACTATATGATAAT+AGG + Chr6:6070078-6070097 MsG0680030613.01.T01:intron 20.0%
!! GAATTGTTTCCTTAAAAAAA+AGG + Chr6:6065567-6065586 MsG0680030613.01.T01:intron 20.0%
!! GATAATGTGTATGAAATTTA+AGG - Chr6:6069377-6069396 None:intergenic 20.0%
!! GTTTGATATAGAAAAACTAT+AGG - Chr6:6067044-6067063 None:intergenic 20.0%
!! TAAAACAAATAAAACACTAG+CGG - Chr6:6072777-6072796 None:intergenic 20.0%
!! TAATGTTTATGTGTATGTAT+TGG + Chr6:6072656-6072675 MsG0680030613.01.T01:three_prime_UTR 20.0%
!! TCAACATAAACAAAAACTAT+CGG - Chr6:6070859-6070878 None:intergenic 20.0%
!! TGAAATTTAATGTACTTTAC+AGG + Chr6:6072355-6072374 MsG0680030613.01.T01:intron 20.0%
!! TGGTAAAATCAAAATATCAA+AGG + Chr6:6070163-6070182 MsG0680030613.01.T01:CDS 20.0%
!!! AAACTTGAGAAAATTTTCAA+TGG + Chr6:6069521-6069540 MsG0680030613.01.T01:intron 20.0%
!!! AACATGATTTTATTCTTGAA+AGG - Chr6:6072731-6072750 None:intergenic 20.0%
!!! AATTTTATAAGGACTAAACT+TGG - Chr6:6072072-6072091 None:intergenic 20.0%
!!! ACATGTGACATTATTAATTT+TGG + Chr6:6066216-6066235 MsG0680030613.01.T01:intron 20.0%
!!! ACTAAAAGTTCAATTGTTTT+AGG + Chr6:6070901-6070920 MsG0680030613.01.T01:intron 20.0%
!!! ACTCATTTTTGTTTACATTT+TGG + Chr6:6068230-6068249 MsG0680030613.01.T01:intron 20.0%
!!! ATTCTGCCAATAAATTTTTT+TGG - Chr6:6065650-6065669 None:intergenic 20.0%
!!! ATTTCTCTCTTTGATAATTA+AGG - Chr6:6068543-6068562 None:intergenic 20.0%
!!! ATTTGATAATTGCTAGATTT+TGG + Chr6:6073142-6073161 MsG0680030613.01.T01:three_prime_UTR 20.0%
!!! CCTTTTATATCTAAATGTTT+AGG + Chr6:6072297-6072316 MsG0680030613.01.T01:intron 20.0%
!!! CTAGTTTACTTTTTTTTAAG+GGG - Chr6:6068114-6068133 None:intergenic 20.0%
!!! CTCATTTTTGTTTACATTTT+GGG + Chr6:6068231-6068250 MsG0680030613.01.T01:intron 20.0%
!!! GACCATTTCATAATTTTTTT+AGG + Chr6:6071633-6071652 MsG0680030613.01.T01:intron 20.0%
!!! TATTTTGTATGGTATTACAT+AGG + Chr6:6071376-6071395 MsG0680030613.01.T01:intron 20.0%
!!! TGAAAGCTTGTAATTTTATA+GGG + Chr6:6072252-6072271 MsG0680030613.01.T01:intron 20.0%
!!! TGAAATGGTCTTAAAAATAA+TGG - Chr6:6071623-6071642 None:intergenic 20.0%
!!! TGAAGAAAAGTATTTATACA+AGG - Chr6:6067231-6067250 None:intergenic 20.0%
!!! TGTAAAAAGTTTTCAAAACA+TGG - Chr6:6072143-6072162 None:intergenic 20.0%
!!! TTATAGAAGATGTTTTAGTT+AGG + Chr6:6068562-6068581 MsG0680030613.01.T01:intron 20.0%
!!! TTGAAAGCTTGTAATTTTAT+AGG + Chr6:6072251-6072270 MsG0680030613.01.T01:intron 20.0%
! AAAATTGAAAGTTACACGAT+TGG + Chr6:6067938-6067957 MsG0680030613.01.T01:intron 25.0%
! AAACTATATGATAATAGGGA+TGG + Chr6:6070083-6070102 MsG0680030613.01.T01:intron 25.0%
! AAACTTGAGAAAAGTTTCAA+TGG - Chr6:6069401-6069420 None:intergenic 25.0%
! AACAATTTGATATATGGATC+TGG - Chr6:6066624-6066643 None:intergenic 25.0%
! AAGAACTTGAAAGATTTAAG+TGG - Chr6:6069851-6069870 None:intergenic 25.0%
! AATGTCATTAACTAATTAGG+TGG + Chr6:6065852-6065871 MsG0680030613.01.T01:intron 25.0%
! AATTGGTCAACAAAAGTTAA+AGG + Chr6:6068167-6068186 MsG0680030613.01.T01:intron 25.0%
! AATTTAATGTACTTTACAGG+AGG + Chr6:6072358-6072377 MsG0680030613.01.T01:intron 25.0%
! ACAATTTGATATATGGATCT+GGG - Chr6:6066623-6066642 None:intergenic 25.0%
! ACATATAAATAGAAGACAAG+CGG + Chr6:6068394-6068413 MsG0680030613.01.T01:intron 25.0%
! AGAACTTGAAAGATTTAAGT+GGG - Chr6:6069850-6069869 None:intergenic 25.0%
! AGGGATTACATTTAGTTATT+CGG + Chr6:6065973-6065992 MsG0680030613.01.T01:intron 25.0%
! ATAAAAAAGCTAACCCAAAA+AGG - Chr6:6068599-6068618 None:intergenic 25.0%
! ATATAAATGATGCAGTTTAC+AGG + Chr6:6071726-6071745 MsG0680030613.01.T01:intron 25.0%
! ATATGTCACATCACTAAAAA+TGG + Chr6:6069159-6069178 MsG0680030613.01.T01:intron 25.0%
! ATCCATATTCTCAATTATCA+AGG - Chr6:6067296-6067315 None:intergenic 25.0%
! ATGGTACATTATCATAAACA+TGG - Chr6:6065511-6065530 None:intergenic 25.0%
! ATTAAAGAAAAGTGGTTAGT+GGG - Chr6:6069456-6069475 None:intergenic 25.0%
! ATTATTGGGAAAGAAATTCA+AGG + Chr6:6070929-6070948 MsG0680030613.01.T01:CDS 25.0%
! ATTGTTCTCTTACAGTATTT+AGG + Chr6:6071311-6071330 MsG0680030613.01.T01:intron 25.0%
! CAAAAACAATTGGTATCAAT+GGG + Chr6:6071459-6071478 MsG0680030613.01.T01:CDS 25.0%
! CAATTAAAAGGTCTTACATT+GGG - Chr6:6070002-6070021 None:intergenic 25.0%
! CTAACTTCAATTGATTAACT+AGG - Chr6:6072597-6072616 None:intergenic 25.0%
! GAATATACATAAATTACCAC+AGG + Chr6:6065823-6065842 MsG0680030613.01.T01:intron 25.0%
! GATAATTGTACTCTATTAGA+AGG + Chr6:6070528-6070547 MsG0680030613.01.T01:intron 25.0%
! GATGTGTAAGATCAATTAAA+AGG - Chr6:6070014-6070033 None:intergenic 25.0%
! GTAAGGAAAATGCTAATAAA+TGG - Chr6:6066379-6066398 None:intergenic 25.0%
! TAAGGAAGTAATCAAAGTAT+TGG + Chr6:6071838-6071857 MsG0680030613.01.T01:CDS 25.0%
! TAAGGAAGTCTGAATATAAT+TGG - Chr6:6069359-6069378 None:intergenic 25.0%
! TATAAAATTCGTCTTCTCAA+CGG + Chr6:6069133-6069152 MsG0680030613.01.T01:intron 25.0%
! TATAAATGATGCAGTTTACA+GGG + Chr6:6071727-6071746 MsG0680030613.01.T01:intron 25.0%
! TATTAAAGAAAAGTGGTTAG+TGG - Chr6:6069457-6069476 None:intergenic 25.0%
! TCAAAAACAATTGGTATCAA+TGG + Chr6:6071458-6071477 MsG0680030613.01.T01:CDS 25.0%
! TCAATTAAAAGGTCTTACAT+TGG - Chr6:6070003-6070022 None:intergenic 25.0%
! TCATATACGTCTCATATTAT+GGG + Chr6:6070732-6070751 MsG0680030613.01.T01:intron 25.0%
! TCGTGATAAAAAGTTCTATT+TGG - Chr6:6064876-6064895 None:intergenic 25.0%
! TGGTACATTATCATAAACAT+GGG - Chr6:6065510-6065529 None:intergenic 25.0%
! TGTTAGTATTATATTGGAAG+TGG + Chr6:6068018-6068037 MsG0680030613.01.T01:intron 25.0%
! TTAATCAAAATACAACCATG+AGG - Chr6:6066841-6066860 None:intergenic 25.0%
! TTATTTCATGGCTTAAGTTA+GGG - Chr6:6068079-6068098 None:intergenic 25.0%
! TTCATATACGTCTCATATTA+TGG + Chr6:6070731-6070750 MsG0680030613.01.T01:intron 25.0%
! TTTATGGGATTCAATTGATA+AGG + Chr6:6064786-6064805 MsG0680030613.01.T01:CDS 25.0%
! TTTATTTCATGGCTTAAGTT+AGG - Chr6:6068080-6068099 None:intergenic 25.0%
! TTTGTTAAAACATCCTTTCA+AGG + Chr6:6072878-6072897 MsG0680030613.01.T01:three_prime_UTR 25.0%
!! ACATAAGGAATTTGAAACTT+TGG + Chr6:6064914-6064933 MsG0680030613.01.T01:CDS 25.0%
!! AGAAGACGAATTTTATATGA+CGG - Chr6:6069130-6069149 None:intergenic 25.0%
!! AGGTAATTAATGAACCTTTT+TGG + Chr6:6068582-6068601 MsG0680030613.01.T01:intron 25.0%
!! ATATCTAAATGTTTAGGGTT+AGG + Chr6:6072303-6072322 MsG0680030613.01.T01:intron 25.0%
!! ATCCTTGATAATTGAGAATA+TGG + Chr6:6067291-6067310 MsG0680030613.01.T01:intron 25.0%
!! ATTGATGTCTATACCTTTTA+GGG + Chr6:6072009-6072028 MsG0680030613.01.T01:intron 25.0%
!! ATTTTCTCTCTCATATTTGA+TGG + Chr6:6069480-6069499 MsG0680030613.01.T01:intron 25.0%
!! GCATAAACACAATATTTTCT+TGG - Chr6:6068785-6068804 None:intergenic 25.0%
!! GGTAATTAATGAACCTTTTT+GGG + Chr6:6068583-6068602 MsG0680030613.01.T01:intron 25.0%
!! TATACTCATCATAGTGTTTT+TGG - Chr6:6068714-6068733 None:intergenic 25.0%
!! TATCTAAATGTTTAGGGTTA+GGG + Chr6:6072304-6072323 MsG0680030613.01.T01:intron 25.0%
!! TATTGATGTCTATACCTTTT+AGG + Chr6:6072008-6072027 MsG0680030613.01.T01:intron 25.0%
!! TATTTTATGTGTAAGTGACA+TGG + Chr6:6071683-6071702 MsG0680030613.01.T01:intron 25.0%
!! TTTCTTTGACTTAATGTGTT+AGG - Chr6:6066180-6066199 None:intergenic 25.0%
!!! AAAGTATTGGAAGAGATATA+TGG + Chr6:6071851-6071870 MsG0680030613.01.T01:CDS 25.0%
!!! AAGTTCAATTGTTTTAGGTA+TGG + Chr6:6070906-6070925 MsG0680030613.01.T01:intron 25.0%
!!! AAGTTTATCTCTTTCAAGTT+TGG - Chr6:6066989-6067008 None:intergenic 25.0%
!!! ACTCTCATGTTGATTTTAAT+AGG + Chr6:6065426-6065445 MsG0680030613.01.T01:intron 25.0%
!!! AGAGATGCTACAATTTTTTT+AGG + Chr6:6068446-6068465 MsG0680030613.01.T01:intron 25.0%
!!! AGTCCTTATTTGCATTTTAT+AGG - Chr6:6072199-6072218 None:intergenic 25.0%
!!! ATTGTGTTCTAGAACAAAAA+GGG - Chr6:6070273-6070292 None:intergenic 25.0%
!!! GTCCTTATTTGCATTTTATA+GGG - Chr6:6072198-6072217 None:intergenic 25.0%
!!! TAAAACTTTGTTTGTCCTTT+TGG - Chr6:6073112-6073131 None:intergenic 25.0%
!!! TAATGACATGATAATGGATT+TGG - Chr6:6069554-6069573 None:intergenic 25.0%
!!! TGGAAACTTGTGATTTTTTA+GGG - Chr6:6072052-6072071 None:intergenic 25.0%
!!! TGTTTTAGGTATGGATTATT+GGG + Chr6:6070915-6070934 MsG0680030613.01.T01:intron 25.0%
!!! TTGGAAACTTGTGATTTTTT+AGG - Chr6:6072053-6072072 None:intergenic 25.0%
!!! TTGTTTTAGGTATGGATTAT+TGG + Chr6:6070914-6070933 MsG0680030613.01.T01:intron 25.0%
!!! TTGTTTTTCTTTATAGAACC+AGG + Chr6:6067337-6067356 MsG0680030613.01.T01:intron 25.0%
!!! TTTGTTTTTTCGACAAAGAA+AGG + Chr6:6072850-6072869 MsG0680030613.01.T01:three_prime_UTR 25.0%
!!! TTTTTGTTTACATTTTGGGA+CGG + Chr6:6068235-6068254 MsG0680030613.01.T01:intron 25.0%
!!! TTTTTTAATCTTCCTTCTCA+TGG + Chr6:6071955-6071974 MsG0680030613.01.T01:CDS 25.0%
AAATCTTCCCATTTAGAGAT+AGG - Chr6:6071809-6071828 None:intergenic 30.0%
AAGAAATTCAAGGACACATT+TGG + Chr6:6070939-6070958 MsG0680030613.01.T01:CDS 30.0%
AATTCCTCTGTTAAAGAGTA+TGG - Chr6:6071029-6071048 None:intergenic 30.0%
ACAGTTATAACCTAGTTTCT+AGG + Chr6:6067406-6067425 MsG0680030613.01.T01:intron 30.0%
ACTCACAAAATACCATTCAT+TGG + Chr6:6065063-6065082 MsG0680030613.01.T01:CDS 30.0%
AGAAACCAAGATATAGGATA+TGG - Chr6:6066662-6066681 None:intergenic 30.0%
AGAAATTCAAGGACACATTT+GGG + Chr6:6070940-6070959 MsG0680030613.01.T01:CDS 30.0%
AGTCTGAATATAATTGGTGA+TGG - Chr6:6069353-6069372 None:intergenic 30.0%
ATCATAACTATTACGCACTT+CGG + Chr6:6071180-6071199 MsG0680030613.01.T01:intron 30.0%
ATGTGTAGACTTTAACATCT+TGG - Chr6:6069326-6069345 None:intergenic 30.0%
ATTATTGCCAATAAGTTGCT+TGG + Chr6:6066724-6066743 MsG0680030613.01.T01:intron 30.0%
ATTCAAGGATGAAGAAAAGA+AGG - Chr6:6065129-6065148 None:intergenic 30.0%
ATTCCTATGAACGATTTGAT+CGG + Chr6:6071399-6071418 MsG0680030613.01.T01:CDS 30.0%
ATTCGTTATTATAGACCACA+TGG - Chr6:6067110-6067129 None:intergenic 30.0%
ATTGGGACCATATACAATTT+AGG - Chr6:6069985-6070004 None:intergenic 30.0%
CAAATTTCCAAGCAACTTAT+TGG - Chr6:6066734-6066753 None:intergenic 30.0%
CAGTTATAACCTAGTTTCTA+GGG + Chr6:6067407-6067426 MsG0680030613.01.T01:intron 30.0%
CATATAAATAGAAGACAAGC+GGG + Chr6:6068395-6068414 MsG0680030613.01.T01:intron 30.0%
CATGATACCTATCTCTAAAT+GGG + Chr6:6071799-6071818 MsG0680030613.01.T01:CDS 30.0%
CATTGATGAGATTGTATTCT+TGG - Chr6:6067762-6067781 None:intergenic 30.0%
CTAAAAATATTGTCACGTCA+CGG - Chr6:6069067-6069086 None:intergenic 30.0%
GAACTTCTTCATAATGAAGA+TGG + Chr6:6070191-6070210 MsG0680030613.01.T01:CDS 30.0%
GAATACAATCTCATCAATGT+TGG + Chr6:6067763-6067782 MsG0680030613.01.T01:CDS 30.0%
GAGTTAGTAACAATAGTCAA+TGG - Chr6:6068052-6068071 None:intergenic 30.0%
GATAGGAGTTCAAAAACAAT+TGG + Chr6:6071449-6071468 MsG0680030613.01.T01:CDS 30.0%
GGAAGATTTAACAGATGATA+AGG + Chr6:6071820-6071839 MsG0680030613.01.T01:CDS 30.0%
GTCCCTATAAAATGCAAATA+AGG + Chr6:6072193-6072212 MsG0680030613.01.T01:intron 30.0%
TAGAAATATTCTTACCACCA+AGG - Chr6:6069938-6069957 None:intergenic 30.0%
TAGCAAGATATAACCAATTC+AGG + Chr6:6071765-6071784 MsG0680030613.01.T01:CDS 30.0%
TATATTAGCCCTAAGAAAAC+AGG - Chr6:6067715-6067734 None:intergenic 30.0%
TATTTCATGGCTTAAGTTAG+GGG - Chr6:6068078-6068097 None:intergenic 30.0%
TCATGATACCTATCTCTAAA+TGG + Chr6:6071798-6071817 MsG0680030613.01.T01:CDS 30.0%
TGATCAAAATTTGGTATGCA+TGG + Chr6:6072996-6073015 MsG0680030613.01.T01:three_prime_UTR 30.0%
TTCAATTCATGATACACGAT+TGG + Chr6:6068907-6068926 MsG0680030613.01.T01:CDS 30.0%
TTCTGTATGGAAAATCAGTA+GGG - Chr6:6067816-6067835 None:intergenic 30.0%
TTGAACTCCTATCTCTATTA+AGG - Chr6:6071442-6071461 None:intergenic 30.0%
TTGCCATACTCTTTGATTAA+TGG - Chr6:6071140-6071159 None:intergenic 30.0%
TTGGCGTGATGTTAATTTAT+GGG + Chr6:6064771-6064790 MsG0680030613.01.T01:CDS 30.0%
TTGGGACCATATACAATTTA+GGG - Chr6:6069984-6070003 None:intergenic 30.0%
TTTAATAGGAGGTAGACTAA+TGG + Chr6:6065440-6065459 MsG0680030613.01.T01:intron 30.0%
TTTCTTAGGGCTAATATACT+TGG + Chr6:6067717-6067736 MsG0680030613.01.T01:CDS 30.0%
TTTGGCGTGATGTTAATTTA+TGG + Chr6:6064770-6064789 MsG0680030613.01.T01:CDS 30.0%
TTTGTCCATATCCTATATCT+TGG + Chr6:6066654-6066673 MsG0680030613.01.T01:intron 30.0%
! AACTTTTTATCACGATGATG+TGG + Chr6:6064881-6064900 MsG0680030613.01.T01:CDS 30.0%
! AGTTAGTTTACATACGACAT+TGG + Chr6:6065253-6065272 MsG0680030613.01.T01:intron 30.0%
! ATGAATGGTATTTTGTGAGT+TGG - Chr6:6065063-6065082 None:intergenic 30.0%
! ATTAATGGTGGAGATTTGTT+AGG - Chr6:6071125-6071144 None:intergenic 30.0%
! CTTCCAGCATTTTCATTAAA+AGG - Chr6:6067862-6067881 None:intergenic 30.0%
! GATCCTTTTAATGAAAATGC+TGG + Chr6:6067856-6067875 MsG0680030613.01.T01:CDS 30.0%
! TGAATGGTATTTTGTGAGTT+GGG - Chr6:6065062-6065081 None:intergenic 30.0%
! TGATTTTGTATAGCAATGGT+TGG - Chr6:6070432-6070451 None:intergenic 30.0%
! TGGATGATTTTGTATAGCAA+TGG - Chr6:6070436-6070455 None:intergenic 30.0%
! TGGTCTTAAAAATAATGGTG+TGG - Chr6:6071618-6071637 None:intergenic 30.0%
! TGTGCTTTTATACTCAACAA+GGG - Chr6:6068623-6068642 None:intergenic 30.0%
! TTGTGCTTTTATACTCAACA+AGG - Chr6:6068624-6068643 None:intergenic 30.0%
! TTTGATGGTTGAGATTTCAA+TGG + Chr6:6069495-6069514 MsG0680030613.01.T01:intron 30.0%
! TTTTTCTTTATAGAACCAGG+TGG + Chr6:6067340-6067359 MsG0680030613.01.T01:intron 30.0%
!! ATGTTTTGAATTTCAGTCGA+TGG + Chr6:6072746-6072765 MsG0680030613.01.T01:three_prime_UTR 30.0%
!! CATTGTGTTCTAGAACAAAA+AGG - Chr6:6070274-6070293 None:intergenic 30.0%
!! TTTCAAGTTCTTCAAGACAA+AGG + Chr6:6069859-6069878 MsG0680030613.01.T01:CDS 30.0%
!!! AACCATTTGTGTGTCATTTT+TGG - Chr6:6072498-6072517 None:intergenic 30.0%
!!! ACCATTTGTGTGTCATTTTT+GGG - Chr6:6072497-6072516 None:intergenic 30.0%
!!! CTCATGTTGATTTTAATAGG+AGG + Chr6:6065429-6065448 MsG0680030613.01.T01:intron 30.0%
!!! GATAGACTCGATTTTTAGTA+AGG - Chr6:6066396-6066415 None:intergenic 30.0%
!!! GATGCTACAATTTTTTTAGG+AGG + Chr6:6068449-6068468 MsG0680030613.01.T01:intron 30.0%
!!! GGACAAACAAAGTTTTAAGT+TGG + Chr6:6073115-6073134 MsG0680030613.01.T01:three_prime_UTR 30.0%
!!! TAATGACATTTTAACTCCTG+TGG - Chr6:6065842-6065861 None:intergenic 30.0%
!!! TTTTGTTTACATTTTGGGAC+GGG + Chr6:6068236-6068255 MsG0680030613.01.T01:intron 30.0%
!!! TTTTTTCGACAAAGAAAGGA+TGG + Chr6:6072854-6072873 MsG0680030613.01.T01:three_prime_UTR 30.0%
AAAGTGAGGACTTTCAAAGA+TGG + Chr6:6070143-6070162 MsG0680030613.01.T01:CDS 35.0%
AATTGCAACATCACAAAGAG+AGG - Chr6:6065225-6065244 None:intergenic 35.0%
ACACGATTGGATAGATCATA+TGG + Chr6:6068920-6068939 MsG0680030613.01.T01:CDS 35.0%
ACACGCAAGTAAATTGGAAT+AGG - Chr6:6072573-6072592 None:intergenic 35.0%
ACACTGAAAAGGGTTTGAAA+TGG + Chr6:6072427-6072446 MsG0680030613.01.T01:CDS 35.0%
ACCCAAAAATGACACACAAA+TGG + Chr6:6072493-6072512 MsG0680030613.01.T01:CDS 35.0%
ACGATCAATCACATCCTTTA+AGG - Chr6:6072469-6072488 None:intergenic 35.0%
ACTCTATTAGAAGGAATACC+CGG + Chr6:6070537-6070556 MsG0680030613.01.T01:intron 35.0%
AGATATAACCAATTCAGGAG+AGG + Chr6:6071770-6071789 MsG0680030613.01.T01:CDS 35.0%
AGGTGACATTCGTAATAGTT+GGG + Chr6:6070226-6070245 MsG0680030613.01.T01:CDS 35.0%
AGTACTCAAGTCATGTTTCA+TGG - Chr6:6070383-6070402 None:intergenic 35.0%
AGTTCCATACTCTTTAACAG+AGG + Chr6:6071022-6071041 MsG0680030613.01.T01:CDS 35.0%
ATATCTTGGTTTCTACACAC+AGG + Chr6:6066668-6066687 MsG0680030613.01.T01:intron 35.0%
ATGAAGAGAGCAGAAAATCA+TGG + Chr6:6070999-6071018 MsG0680030613.01.T01:CDS 35.0%
ATGGATAGTTCCAAAGTTCT+AGG - Chr6:6071503-6071522 None:intergenic 35.0%
ATGGCAGAGAAGAAGATAAA+GGG + Chr6:6071911-6071930 MsG0680030613.01.T01:CDS 35.0%
ATTCAATTGATAAGGCTCTC+AGG + Chr6:6064794-6064813 MsG0680030613.01.T01:CDS 35.0%
CAAAGATTCACACCATAGAT+TGG + Chr6:6070617-6070636 MsG0680030613.01.T01:CDS 35.0%
CACGCAAGTAAATTGGAATA+GGG - Chr6:6072572-6072591 None:intergenic 35.0%
CAGAAAAAAGATACTCCATC+CGG - Chr6:6071338-6071357 None:intergenic 35.0%
CCACCATTAATCAAAGAGTA+TGG + Chr6:6071134-6071153 MsG0680030613.01.T01:intron 35.0%
CCATACTCTTTGATTAATGG+TGG - Chr6:6071137-6071156 None:intergenic 35.0%
GAACACTACTGAAACCTTAA+AGG + Chr6:6072452-6072471 MsG0680030613.01.T01:CDS 35.0%
GAGAAGACCTTAATAGAGAT+AGG + Chr6:6071432-6071451 MsG0680030613.01.T01:CDS 35.0%
GATAAGTCTATAGAACAAGG+TGG + Chr6:6067362-6067381 MsG0680030613.01.T01:intron 35.0%
GTAGTAGATAATAGCGAGTT+TGG + Chr6:6065356-6065375 MsG0680030613.01.T01:intron 35.0%
GTGGATAAGTCTATAGAACA+AGG + Chr6:6067359-6067378 MsG0680030613.01.T01:intron 35.0%
GTGTGTAGAAACCAAGATAT+AGG - Chr6:6066668-6066687 None:intergenic 35.0%
GTTCTGTATGGAAAATCAGT+AGG - Chr6:6067817-6067836 None:intergenic 35.0%
GTTTACATACGACATTGGAA+CGG + Chr6:6065258-6065277 MsG0680030613.01.T01:intron 35.0%
TATCCAAAGAATCAAATCCG+TGG + Chr6:6066565-6066584 MsG0680030613.01.T01:intron 35.0%
TCCACTCAATATGGAATTTC+CGG - Chr6:6070970-6070989 None:intergenic 35.0%
TCGTCACTTAACTTAAGTTC+AGG - Chr6:6065612-6065631 None:intergenic 35.0%
TCTAGAGAGGAGAACATATA+AGG + Chr6:6068845-6068864 MsG0680030613.01.T01:CDS 35.0%
TCTCAGGAGAAACTATAACA+TGG + Chr6:6064810-6064829 MsG0680030613.01.T01:CDS 35.0%
TCTGTTATGAATATGTGCTG+CGG + Chr6:6069103-6069122 MsG0680030613.01.T01:intron 35.0%
TCTTCATCCTTGAATTGCAT+AGG + Chr6:6065134-6065153 MsG0680030613.01.T01:intron 35.0%
TGAAAGATTTAAGTGGGCAT+TGG - Chr6:6069844-6069863 None:intergenic 35.0%
TGATTCAAACCCTAGAAACT+AGG - Chr6:6067419-6067438 None:intergenic 35.0%
TGCATGGAAATCTTTATGGA+TGG - Chr6:6067170-6067189 None:intergenic 35.0%
TGGATAGTTCCAAAGTTCTA+GGG - Chr6:6071502-6071521 None:intergenic 35.0%
TTAATGTGATTGCAGCATCT+TGG + Chr6:6068883-6068902 MsG0680030613.01.T01:CDS 35.0%
TTCAACACATGTCAACATGT+GGG - Chr6:6066253-6066272 None:intergenic 35.0%
TTCAAGTGCTTTCTCTGTTT+GGG + Chr6:6072524-6072543 MsG0680030613.01.T01:CDS 35.0%
TTGTATCAAGCAAAACCATG+TGG + Chr6:6067092-6067111 MsG0680030613.01.T01:intron 35.0%
TTGTGATGTTGCAATTGATG+AGG + Chr6:6065229-6065248 MsG0680030613.01.T01:intron 35.0%
TTGTTGCAACAGAGCATAAA+TGG - Chr6:6064842-6064861 None:intergenic 35.0%
TTTACATACGACATTGGAAC+GGG + Chr6:6065259-6065278 MsG0680030613.01.T01:intron 35.0%
TTTCACAAGCAACTACAATG+AGG + Chr6:6072398-6072417 MsG0680030613.01.T01:CDS 35.0%
! AATGTTTAGGGTTAGGGTTT+AGG + Chr6:6072310-6072329 MsG0680030613.01.T01:intron 35.0%
! CACTGAAAAGGGTTTGAAAT+GGG + Chr6:6072428-6072447 MsG0680030613.01.T01:CDS 35.0%
! GATATATGGTGATGATGTTG+AGG + Chr6:6071865-6071884 MsG0680030613.01.T01:CDS 35.0%
! GCTAACCTTTTATTCGGTTT+CGG - Chr6:6068687-6068706 None:intergenic 35.0%
! GGTGTAGCTAACCTTTTATT+CGG - Chr6:6068693-6068712 None:intergenic 35.0%
! TCCATATTGAGTGGATTTGT+GGG + Chr6:6070975-6070994 MsG0680030613.01.T01:CDS 35.0%
! TCTCTTACAGTATTTAGGAC+CGG + Chr6:6071316-6071335 MsG0680030613.01.T01:intron 35.0%
! TGGAAGCAATCAAGAAGTTT+TGG + Chr6:6070118-6070137 MsG0680030613.01.T01:CDS 35.0%
! TGTGGAGTATTTGGAACATA+AGG + Chr6:6064899-6064918 MsG0680030613.01.T01:CDS 35.0%
! TTCCATATTGAGTGGATTTG+TGG + Chr6:6070974-6070993 MsG0680030613.01.T01:CDS 35.0%
!! AACTTTGGAACTATCCATCA+TGG + Chr6:6071505-6071524 MsG0680030613.01.T01:CDS 35.0%
!! GAAGAGAAAAGCATCTATGA+TGG - Chr6:6067209-6067228 None:intergenic 35.0%
!! TAGTTTCTAGGGTTTGAATC+AGG + Chr6:6067418-6067437 MsG0680030613.01.T01:intron 35.0%
!! TCTTGGTTTTTGCCAATGAA+TGG - Chr6:6065078-6065097 None:intergenic 35.0%
!! TCTTTCAAGTTTGGTGTCAT+TGG - Chr6:6066980-6066999 None:intergenic 35.0%
!!! AAGAAGTTTTGGACAAAGTG+AGG + Chr6:6070129-6070148 MsG0680030613.01.T01:CDS 35.0%
!!! AAGTGGTTAGTGGGTTTTAA+TGG - Chr6:6069447-6069466 None:intergenic 35.0%
!!! GCATTTTATAGGGACTAGTT+TGG - Chr6:6072188-6072207 None:intergenic 35.0%
!!! TTTGTTTACATTTTGGGACG+GGG + Chr6:6068237-6068256 MsG0680030613.01.T01:intron 35.0%
!!! TTTTATAGGGACTAGTTTGG+AGG - Chr6:6072185-6072204 None:intergenic 35.0%
AAAAATCATCGCGATCCTCA+TGG + Chr6:6066823-6066842 MsG0680030613.01.T01:intron 40.0%
AAAATTCGTCTTCTCAACGG+TGG + Chr6:6069136-6069155 MsG0680030613.01.T01:intron 40.0%
AACGATTTGATCGGACTACA+AGG + Chr6:6071408-6071427 MsG0680030613.01.T01:CDS 40.0%
AAGACAAAGGAAATCCCAAC+TGG + Chr6:6069872-6069891 MsG0680030613.01.T01:CDS 40.0%
AAGATCTAACCATGTGGACT+TGG + Chr6:6071566-6071585 MsG0680030613.01.T01:CDS 40.0%
AATGAAAATGCTGGAAGCCA+AGG + Chr6:6067865-6067884 MsG0680030613.01.T01:CDS 40.0%
AATGTCACGTGTGTAAGCTA+AGG - Chr6:6066441-6066460 None:intergenic 40.0%
AATGTTGGAACAACACCTGT+AGG + Chr6:6067778-6067797 MsG0680030613.01.T01:CDS 40.0%
AGATCTTCATCTTCCAAGTC+CGG - Chr6:6070559-6070578 None:intergenic 40.0%
AGGAGAACATATAAGGACAC+AGG + Chr6:6068852-6068871 MsG0680030613.01.T01:CDS 40.0%
AGGTTAACACACCTTCTTGA+TGG + Chr6:6064973-6064992 MsG0680030613.01.T01:CDS 40.0%
AGTCCGATCAAATCGTTCAT+AGG - Chr6:6071405-6071424 None:intergenic 40.0%
AGTTGCCGAAACCGAATAAA+AGG + Chr6:6068679-6068698 MsG0680030613.01.T01:intron 40.0%
ATAGGGTTGTGTTTGTTTGG+TGG - Chr6:6072555-6072574 None:intergenic 40.0%
ATGTTGGAACAACACCTGTA+GGG + Chr6:6067779-6067798 MsG0680030613.01.T01:CDS 40.0%
ATTCTTACCACCAAGGTGTA+CGG - Chr6:6069931-6069950 None:intergenic 40.0%
CAATCAAATTCTTGCCACTG+CGG - Chr6:6065020-6065039 None:intergenic 40.0%
CACAGAAAGATCTAACCATG+TGG + Chr6:6071560-6071579 MsG0680030613.01.T01:CDS 40.0%
CACTTATGTCTACCTCTTCT+TGG - Chr6:6065095-6065114 None:intergenic 40.0%
CAGGTGACATTCGTAATAGT+TGG + Chr6:6070225-6070244 MsG0680030613.01.T01:CDS 40.0%
CATCTGCATTATGTGGTACT+AGG - Chr6:6071539-6071558 None:intergenic 40.0%
CATGGCAGAGAAGAAGATAA+AGG + Chr6:6071910-6071929 MsG0680030613.01.T01:CDS 40.0%
CATTGGCAAAAACCAAGAAG+AGG + Chr6:6065080-6065099 MsG0680030613.01.T01:CDS 40.0%
CCAATTGGTAAGAACACATG+TGG + Chr6:6070686-6070705 MsG0680030613.01.T01:intron 40.0%
CCACATGTGTTCTTACCAAT+TGG - Chr6:6070689-6070708 None:intergenic 40.0%
CCATATTCCCAACTTGTCAA+TGG - Chr6:6067683-6067702 None:intergenic 40.0%
CCTTGAATTGCATAGGTAGT+GGG + Chr6:6065141-6065160 MsG0680030613.01.T01:intron 40.0%
CTACCACGGATTTGATTCTT+TGG - Chr6:6066571-6066590 None:intergenic 40.0%
CTAGGAACACGCAAGTAAAT+TGG - Chr6:6072579-6072598 None:intergenic 40.0%
CTAGTACCACATAATGCAGA+TGG + Chr6:6071537-6071556 MsG0680030613.01.T01:CDS 40.0%
CTGCTGCATGGAAATCTTTA+TGG - Chr6:6067174-6067193 None:intergenic 40.0%
CTTAAAACCGACACTTTGCT+TGG + Chr6:6070652-6070671 MsG0680030613.01.T01:CDS 40.0%
CTTCAAGTGCTTTCTCTGTT+TGG + Chr6:6072523-6072542 MsG0680030613.01.T01:CDS 40.0%
GAAGAATGAAACGAATGCTC+AGG + Chr6:6064942-6064961 MsG0680030613.01.T01:CDS 40.0%
GAAGATGGAACAGCAATTTC+AGG + Chr6:6070206-6070225 MsG0680030613.01.T01:CDS 40.0%
GAGGAGACATACACTGAAAA+GGG + Chr6:6072417-6072436 MsG0680030613.01.T01:CDS 40.0%
GGAAATCTTTATGGATGGCA+TGG - Chr6:6067165-6067184 None:intergenic 40.0%
GGAATAGGGTTGTGTTTGTT+TGG - Chr6:6072558-6072577 None:intergenic 40.0%
GGAGAACATATAAGGACACA+GGG + Chr6:6068853-6068872 MsG0680030613.01.T01:CDS 40.0%
GGCTAATATACTTGGCCATT+AGG + Chr6:6067725-6067744 MsG0680030613.01.T01:CDS 40.0%
GGTGGATAAGCTGTTAAAAC+TGG + Chr6:6067380-6067399 MsG0680030613.01.T01:intron 40.0%
GTACACTCCATTGACAAGTT+GGG + Chr6:6067673-6067692 MsG0680030613.01.T01:CDS 40.0%
GTTCAACACATGTCAACATG+TGG - Chr6:6066254-6066273 None:intergenic 40.0%
GTTCTATAGACTTATCCACC+TGG - Chr6:6067358-6067377 None:intergenic 40.0%
TAAAGATTTCCATGCAGCAG+TGG + Chr6:6067174-6067193 MsG0680030613.01.T01:intron 40.0%
TACAACCTTCGTAGAGTCTA+AGG - Chr6:6065318-6065337 None:intergenic 40.0%
TCCGGAAATTCCATATTGAG+TGG + Chr6:6070966-6070985 MsG0680030613.01.T01:CDS 40.0%
TCCTTGAATTGCATAGGTAG+TGG + Chr6:6065140-6065159 MsG0680030613.01.T01:intron 40.0%
TCTCTCAAATGCAGGAAATC+AGG - Chr6:6071083-6071102 None:intergenic 40.0%
TCTTTATCGCTATGCTAGAC+TGG + Chr6:6070576-6070595 MsG0680030613.01.T01:CDS 40.0%
TGAATAGTCCTCTCCTGAAT+TGG - Chr6:6071781-6071800 None:intergenic 40.0%
TGAGGAGACATACACTGAAA+AGG + Chr6:6072416-6072435 MsG0680030613.01.T01:CDS 40.0%
TGGATCTGGGTACTATGAAT+AGG - Chr6:6066610-6066629 None:intergenic 40.0%
TGTACACTCCATTGACAAGT+TGG + Chr6:6067672-6067691 MsG0680030613.01.T01:CDS 40.0%
TTCAACACATGTCCACATGT+GGG - Chr6:6066486-6066505 None:intergenic 40.0%
TTCTGCCAAAGAAAGATCCT+TGG - Chr6:6067885-6067904 None:intergenic 40.0%
TTGGTGAAGATGTCTCCTAA+TGG - Chr6:6067743-6067762 None:intergenic 40.0%
TTTACCTAGATGCCATGAGA+AGG - Chr6:6071970-6071989 None:intergenic 40.0%
TTTCCATACAGAACTGCTGA+TGG + Chr6:6067823-6067842 MsG0680030613.01.T01:CDS 40.0%
! AATCCCAACTGGTTTCTATG+AGG + Chr6:6069883-6069902 MsG0680030613.01.T01:CDS 40.0%
! ACCGTATGCCTGTTTTCTTA+GGG + Chr6:6067704-6067723 MsG0680030613.01.T01:CDS 40.0%
! AGGGATGGAAGTGTGATATA+TGG + Chr6:6070098-6070117 MsG0680030613.01.T01:intron 40.0%
! CCATTGACAAGTTGGGAATA+TGG + Chr6:6067680-6067699 MsG0680030613.01.T01:CDS 40.0%
! TAACACACCTTCTTGATGGT+TGG + Chr6:6064977-6064996 MsG0680030613.01.T01:CDS 40.0%
! TCACGATGATGTGGAGTATT+TGG + Chr6:6064890-6064909 MsG0680030613.01.T01:CDS 40.0%
! TGCTGTTTGTGATTCTCTCA+AGG + Chr6:6070292-6070311 MsG0680030613.01.T01:CDS 40.0%
! TTACAGTATTTAGGACCGGA+TGG + Chr6:6071320-6071339 MsG0680030613.01.T01:intron 40.0%
! TTTTGCCTTAGACTCTACGA+AGG + Chr6:6065310-6065329 MsG0680030613.01.T01:intron 40.0%
!! CATTGGTTTGCAACTTCTCT+TGG - Chr6:6069827-6069846 None:intergenic 40.0%
!! TCTCCTCTCTAGAAGTTTTG+TGG - Chr6:6068838-6068857 None:intergenic 40.0%
!!! TGGTTAGTGGGTTTTAATGG+TGG - Chr6:6069444-6069463 None:intergenic 40.0%
!!! TTGTTTACATTTTGGGACGG+GGG + Chr6:6068238-6068257 MsG0680030613.01.T01:intron 40.0%
AAAACCGACACTTTGCTTGG+AGG + Chr6:6070655-6070674 MsG0680030613.01.T01:CDS 45.0%
AAGCTCCACAGTCCAATCTA+TGG - Chr6:6070632-6070651 None:intergenic 45.0%
AAGGACACATTTGGGCATTC+CGG + Chr6:6070948-6070967 MsG0680030613.01.T01:CDS 45.0%
AATTGCTTGCGAAGACTGCT+TGG + Chr6:6065195-6065214 MsG0680030613.01.T01:intron 45.0%
ACCTCTTTCTTCTGATCCAC+AGG - Chr6:6067916-6067935 None:intergenic 45.0%
AGTCACTCATGAACTAACCG+GGG + Chr6:6065463-6065482 MsG0680030613.01.T01:intron 45.0%
ATGCAAACATCCGTACACCT+TGG + Chr6:6069918-6069937 MsG0680030613.01.T01:CDS 45.0%
CAGATGTGTCTCTCAAATGC+AGG - Chr6:6071091-6071110 None:intergenic 45.0%
CCCACTACCTATGCAATTCA+AGG - Chr6:6065144-6065163 None:intergenic 45.0%
CCTCTTTCTTCTGATCCACA+GGG - Chr6:6067915-6067934 None:intergenic 45.0%
CTTCCATCAGCAGTTCTGTA+TGG - Chr6:6067829-6067848 None:intergenic 45.0%
GACATTCGTAATAGTTGGGC+TGG + Chr6:6070230-6070249 MsG0680030613.01.T01:CDS 45.0%
GAGTCACTCATGAACTAACC+GGG + Chr6:6065462-6065481 MsG0680030613.01.T01:intron 45.0%
GATCTTCATCTTCCAAGTCC+GGG - Chr6:6070558-6070577 None:intergenic 45.0%
GCCCACAAATCCACTCAATA+TGG - Chr6:6070979-6070998 None:intergenic 45.0%
GCCCTAAGAAAACAGGCATA+CGG - Chr6:6067708-6067727 None:intergenic 45.0%
GGAAGCCAAGGATCTTTCTT+TGG + Chr6:6067877-6067896 MsG0680030613.01.T01:CDS 45.0%
GGACCTCATAGAAACCAGTT+GGG - Chr6:6069889-6069908 None:intergenic 45.0%
GGAGTCACTCATGAACTAAC+CGG + Chr6:6065461-6065480 MsG0680030613.01.T01:intron 45.0%
GTACTTTACAGGAGGCTAGA+GGG + Chr6:6072366-6072385 MsG0680030613.01.T01:intron 45.0%
GTTCAACACATGTCCACATG+TGG - Chr6:6066487-6066506 None:intergenic 45.0%
GTTGTTGAAACCAGACCCAA+TGG + Chr6:6068806-6068825 MsG0680030613.01.T01:intron 45.0%
GTTTACAGGGATAGAGAGAG+AGG + Chr6:6071740-6071759 MsG0680030613.01.T01:intron 45.0%
TCAAATGCAGGAAATCAGGC+AGG - Chr6:6071079-6071098 None:intergenic 45.0%
TCACACCATAGATTGGACTG+TGG + Chr6:6070624-6070643 MsG0680030613.01.T01:CDS 45.0%
TCATATGGAAGACACTCAGC+AGG + Chr6:6068935-6068954 MsG0680030613.01.T01:CDS 45.0%
TCATGGCTTAAGTTAGGGGA+GGG - Chr6:6068074-6068093 None:intergenic 45.0%
TCCTTTCAAGGAGACGTGAT+CGG + Chr6:6072890-6072909 MsG0680030613.01.T01:three_prime_UTR 45.0%
TCTGTGCCATCTGCATTATG+TGG - Chr6:6071546-6071565 None:intergenic 45.0%
TCTTCCTTCTCATGGCATCT+AGG + Chr6:6071963-6071982 MsG0680030613.01.T01:CDS 45.0%
TGATGTGCTAGTAGGTCTCA+TGG + Chr6:6071892-6071911 MsG0680030613.01.T01:CDS 45.0%
TGGACCTCATAGAAACCAGT+TGG - Chr6:6069890-6069909 None:intergenic 45.0%
TGTACGGATGTTTGCATGTC+CGG - Chr6:6069915-6069934 None:intergenic 45.0%
TGTACTTTACAGGAGGCTAG+AGG + Chr6:6072365-6072384 MsG0680030613.01.T01:intron 45.0%
TGTTGGAACAACACCTGTAG+GGG + Chr6:6067780-6067799 MsG0680030613.01.T01:CDS 45.0%
TTAGAAGGAATACCCGGACT+TGG + Chr6:6070543-6070562 MsG0680030613.01.T01:intron 45.0%
TTCATGGCTTAAGTTAGGGG+AGG - Chr6:6068075-6068094 None:intergenic 45.0%
! ACACCTTCTTGATGGTTGGA+AGG + Chr6:6064981-6065000 MsG0680030613.01.T01:CDS 45.0%
! ACATGGGAGTTAGCTTCAGA+TGG - Chr6:6065494-6065513 None:intergenic 45.0%
! ACATTTTTGCCACTGCTGCA+TGG - Chr6:6067186-6067205 None:intergenic 45.0%
! ATGGGAGTTAGCTTCAGATG+GGG - Chr6:6065492-6065511 None:intergenic 45.0%
! CACCGTATGCCTGTTTTCTT+AGG + Chr6:6067703-6067722 MsG0680030613.01.T01:CDS 45.0%
! CATGGGAGTTAGCTTCAGAT+GGG - Chr6:6065493-6065512 None:intergenic 45.0%
! TGGCCACAAAACTTCTAGAG+AGG + Chr6:6068832-6068851 MsG0680030613.01.T01:CDS 45.0%
! TGTATAGCAATGGTTGGTCG+TGG - Chr6:6070426-6070445 None:intergenic 45.0%
!! GGTATTTTGTGAGTTGGGCT+CGG - Chr6:6065057-6065076 None:intergenic 45.0%
!! ACAAAAAAAAATATAATTAT+TGG - Chr6:6067626-6067645 None:intergenic 5.0%
!! TTCAAATATATAATAATATA+AGG - Chr6:6069706-6069725 None:intergenic 5.0%
!!! AAATTTTTTTTTTTTTTTGA+AGG - Chr6:6070036-6070055 None:intergenic 5.0%
!!! TAAAAAAGATTATTTTTTTA+GGG - Chr6:6073049-6073068 None:intergenic 5.0%
!!! TTAAAAAAGATTATTTTTTT+AGG - Chr6:6073050-6073069 None:intergenic 5.0%
!!! TTTTTTATTTTTTATAAAAC+TGG - Chr6:6065689-6065708 None:intergenic 5.0%
!!! TTTTTTGTTTTTTTTTTTTA+TGG + Chr6:6067638-6067657 MsG0680030613.01.T01:intron 5.0%
AACAAACCCGTGCATTCGCA+CGG - Chr6:6070473-6070492 None:intergenic 50.0%
AATGGGTCACCAAGCTTGTG+GGG + Chr6:6071476-6071495 MsG0680030613.01.T01:CDS 50.0%
ACTAGGTCTCTGAGCCATGA+TGG - Chr6:6071522-6071541 None:intergenic 50.0%
AGAGACACATCTGTCTCTCC+GGG + Chr6:6071098-6071117 MsG0680030613.01.T01:CDS 50.0%
ATGTCCACATGTGGGTTCGA+GGG - Chr6:6066478-6066497 None:intergenic 50.0%
CAAACATCCGTACACCTTGG+TGG + Chr6:6069921-6069940 MsG0680030613.01.T01:CDS 50.0%
CAATGGGTCACCAAGCTTGT+GGG + Chr6:6071475-6071494 MsG0680030613.01.T01:CDS 50.0%
CATGCCTCCAAGCAAAGTGT+CGG - Chr6:6070662-6070681 None:intergenic 50.0%
CATGTCAACATGTGGGTTCG+AGG - Chr6:6066246-6066265 None:intergenic 50.0%
CCCTGTGGATCAGAAGAAAG+AGG + Chr6:6067912-6067931 MsG0680030613.01.T01:CDS 50.0%
CCTCCTTCCAACCATCAAGA+AGG - Chr6:6064987-6065006 None:intergenic 50.0%
CCTTTCAAGGAGACGTGATC+GGG + Chr6:6072891-6072910 MsG0680030613.01.T01:three_prime_UTR 50.0%
CGAATGCTCAGGTCGTTGAA+AGG + Chr6:6064953-6064972 MsG0680030613.01.T01:CDS 50.0%
GAACAACACCTGTAGGGGTT+AGG + Chr6:6067785-6067804 MsG0680030613.01.T01:CDS 50.0%
GAGAGACACATCTGTCTCTC+CGG + Chr6:6071097-6071116 MsG0680030613.01.T01:CDS 50.0%
GAGGAGCTTGATGTGCTAGT+AGG + Chr6:6071884-6071903 MsG0680030613.01.T01:CDS 50.0%
GAGGCTAAGATTATCCGCAG+TGG + Chr6:6065003-6065022 MsG0680030613.01.T01:CDS 50.0%
GGTTTCTATGAGGTCCAGAC+CGG + Chr6:6069893-6069912 MsG0680030613.01.T01:CDS 50.0%
GTCACGTGTGTAAGCTAAGG+AGG - Chr6:6066438-6066457 None:intergenic 50.0%
GTTGAAACCAGACCCAATGG+TGG + Chr6:6068809-6068828 MsG0680030613.01.T01:CDS 50.0%
TCAATGGGTCACCAAGCTTG+TGG + Chr6:6071474-6071493 MsG0680030613.01.T01:CDS 50.0%
TGGCAGAAACATTCTCCCTG+TGG + Chr6:6067897-6067916 MsG0680030613.01.T01:CDS 50.0%
! CCTTCTTGATGGTTGGAAGG+AGG + Chr6:6064984-6065003 MsG0680030613.01.T01:CDS 50.0%
! GTTTTGTGGCCACCACCATT+GGG - Chr6:6068824-6068843 None:intergenic 50.0%
!! AGTTTTGTGGCCACCACCAT+TGG - Chr6:6068825-6068844 None:intergenic 50.0%
!! GTTTGGTGTCATTGGCTGCT+AGG - Chr6:6066972-6066991 None:intergenic 50.0%
CAAGAGCAGCCAAGTCCACA+TGG - Chr6:6071578-6071597 None:intergenic 55.0%
CAGTATCCGTGCGAATGCAC+GGG + Chr6:6070464-6070483 MsG0680030613.01.T01:intron 55.0%
CATGTCCACATGTGGGTTCG+AGG - Chr6:6066479-6066498 None:intergenic 55.0%
CCAGTATCCGTGCGAATGCA+CGG + Chr6:6070463-6070482 MsG0680030613.01.T01:intron 55.0%
CCCGATCACGTCTCCTTGAA+AGG - Chr6:6072894-6072913 None:intergenic 55.0%
CTTGTGGGGCCCTAGAACTT+TGG + Chr6:6071490-6071509 MsG0680030613.01.T01:CDS 55.0%
GAAACCAGACCCAATGGTGG+TGG + Chr6:6068812-6068831 MsG0680030613.01.T01:CDS 55.0%
GAGACACATCTGTCTCTCCG+GGG + Chr6:6071099-6071118 MsG0680030613.01.T01:CDS 55.0%
GCATTCGCACGGATACTGGT+TGG - Chr6:6070462-6070481 None:intergenic 55.0%
GGATGTTTGCATGTCCGGTC+TGG - Chr6:6069910-6069929 None:intergenic 55.0%
GGGTTTGACCTAACCCCTAC+AGG - Chr6:6067796-6067815 None:intergenic 55.0%
TGCAGGAAATCAGGCAGGAG+TGG - Chr6:6071074-6071093 None:intergenic 55.0%
TGTCCACATGTGGGTTCGAG+GGG - Chr6:6066477-6066496 None:intergenic 55.0%
!! GGTGGAGATTTGTTAGGCCC+CGG - Chr6:6071119-6071138 None:intergenic 55.0%
!! GGTGTCATTGGCTGCTAGGA+GGG - Chr6:6066968-6066987 None:intergenic 55.0%
!! TGGTGTCATTGGCTGCTAGG+AGG - Chr6:6066969-6066988 None:intergenic 55.0%
AGCTTCAGATGGGGCTACCC+CGG - Chr6:6065483-6065502 None:intergenic 60.0%
CCGTGCATTCGCACGGATAC+TGG - Chr6:6070466-6070485 None:intergenic 60.0%
GAACCCCTCGAACCCACATG+TGG + Chr6:6066471-6066490 MsG0680030613.01.T01:intron 60.0%
! GCACGGATACTGGTTGGTCG+TGG - Chr6:6070456-6070475 None:intergenic 60.0%
! GTCATTGGCTGCTAGGAGGG+TGG - Chr6:6066965-6066984 None:intergenic 60.0%
! TTGGAGGCATGCGCGCCAAT+TGG + Chr6:6070671-6070690 MsG0680030613.01.T01:CDS 60.0%
!! GTTCTAGGGCCCCACAAGCT+TGG - Chr6:6071488-6071507 None:intergenic 60.0%
GTGGCCACCACCATTGGGTC+TGG - Chr6:6068819-6068838 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 6064763 6073240 6064763 ID=MsG0680030613.01;Name=MsG0680030613.01
Chr6 mRNA 6064763 6073240 6064763 ID=MsG0680030613.01.T01;Parent=MsG0680030613.01;Name=MsG0680030613.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0.88|0.9|1|1|1|10|638|715
Chr6 exon 6064763 6065101 6064763 ID=MsG0680030613.01.T01:exon:5992;Parent=MsG0680030613.01.T01
Chr6 exon 6067670 6067933 6067670 ID=MsG0680030613.01.T01:exon:5993;Parent=MsG0680030613.01.T01
Chr6 exon 6068807 6068956 6068807 ID=MsG0680030613.01.T01:exon:5994;Parent=MsG0680030613.01.T01
Chr6 exon 6069809 6069942 6069809 ID=MsG0680030613.01.T01:exon:5995;Parent=MsG0680030613.01.T01
Chr6 exon 6070100 6070313 6070100 ID=MsG0680030613.01.T01:exon:5996;Parent=MsG0680030613.01.T01
Chr6 exon 6070547 6070692 6070547 ID=MsG0680030613.01.T01:exon:5997;Parent=MsG0680030613.01.T01
Chr6 exon 6070923 6071150 6070923 ID=MsG0680030613.01.T01:exon:5998;Parent=MsG0680030613.01.T01
Chr6 exon 6071398 6071600 6071398 ID=MsG0680030613.01.T01:exon:5999;Parent=MsG0680030613.01.T01
Chr6 exon 6071741 6071984 6071741 ID=MsG0680030613.01.T01:exon:6000;Parent=MsG0680030613.01.T01
Chr6 exon 6072377 6073240 6072377 ID=MsG0680030613.01.T01:exon:6001;Parent=MsG0680030613.01.T01
Chr6 CDS 6064763 6065101 6064763 ID=MsG0680030613.01.T01:cds;Parent=MsG0680030613.01.T01
Chr6 CDS 6067670 6067933 6067670 ID=MsG0680030613.01.T01:cds;Parent=MsG0680030613.01.T01
Chr6 CDS 6068807 6068956 6068807 ID=MsG0680030613.01.T01:cds;Parent=MsG0680030613.01.T01
Chr6 CDS 6069809 6069942 6069809 ID=MsG0680030613.01.T01:cds;Parent=MsG0680030613.01.T01
Chr6 CDS 6070100 6070313 6070100 ID=MsG0680030613.01.T01:cds;Parent=MsG0680030613.01.T01
Chr6 CDS 6070547 6070692 6070547 ID=MsG0680030613.01.T01:cds;Parent=MsG0680030613.01.T01
Chr6 CDS 6070923 6071150 6070923 ID=MsG0680030613.01.T01:cds;Parent=MsG0680030613.01.T01
Chr6 CDS 6071398 6071600 6071398 ID=MsG0680030613.01.T01:cds;Parent=MsG0680030613.01.T01
Chr6 CDS 6071741 6071984 6071741 ID=MsG0680030613.01.T01:cds;Parent=MsG0680030613.01.T01
Chr6 CDS 6072377 6072602 6072377 ID=MsG0680030613.01.T01:cds;Parent=MsG0680030613.01.T01
Chr6 three_prime_UTR 6072603 6073240 6072603 ID=MsG0680030613.01.T01:three_prime_utr;Parent=MsG0680030613.01.T01
Gene Sequence

>MsG0680030613.01.T01

ATGCAAATTTGGCGTGATGTTAATTTATGGGATTCAATTGATAAGGCTCTCAGGAGAAACTATAACATGGATGCGACCATTTATGCTCTGTTGCAACAACTTAATGCGAGCCAAATAGAACTTTTTATCACGATGATGTGGAGTATTTGGAACATAAGGAATTTGAAACTTTGGCAACAGAAGAATGAAACGAATGCTCAGGTCGTTGAAAGGTTAACACACCTTCTTGATGGTTGGAAGGAGGCTAAGATTATCCGCAGTGGCAAGAATTTGATTGCAAATATGCAGCAACCGAGCCCAACTCACAAAATACCATTCATTGGCAAAAACCAAGAAGAGATTGTACACTCCATTGACAAGTTGGGAATATGGCACCGTATGCCTGTTTTCTTAGGGCTAATATACTTGGCCATTAGGAGACATCTTCACCAAGAATACAATCTCATCAATGTTGGAACAACACCTGTAGGGGTTAGGTCAAACCCTACTGATTTTCCATACAGAACTGCTGATGGAAGATATAATGATCCTTTTAATGAAAATGCTGGAAGCCAAGGATCTTTCTTTGGCAGAAACATTCTCCCTGTGGATCAGAAGAAAGAGTTGTTGAAACCAGACCCAATGGTGGTGGCCACAAAACTTCTAGAGAGGAGAACATATAAGGACACAGGGAAACAATTTAATGTGATTGCAGCATCTTGGATTCAATTCATGATACACGATTGGATAGATCATATGGAAGACACTCAGCAGATTGAACTCATTGCACCAAGAGAAGTTGCAAACCAATGCCCACTTAAATCTTTCAAGTTCTTCAAGACAAAGGAAATCCCAACTGGTTTCTATGAGGTCCAGACCGGACATGCAAACATCCGTACACCTTGGTGGGATGGAAGTGTGATATATGGAAGCAATCAAGAAGTTTTGGACAAAGTGAGGACTTTCAAAGATGGTAAAATCAAAATATCAAAGGAAGGTGAACTTCTTCATAATGAAGATGGAACAGCAATTTCAGGTGACATTCGTAATAGTTGGGCTGGTGTCACAACTTTGCAGACCCTTTTTGTTCTAGAACACAATGCTGTTTGTGATTCTCTCAAGAAGGAATACCCGGACTTGGAAGATGAAGATCTTTATCGCTATGCTAGACTGGTAACTTCAGCTGTGATAGCAAAGATTCACACCATAGATTGGACTGTGGAGCTTCTTAAAACCGACACTTTGCTTGGAGGCATGCGCGCCAATTGGTATGGATTATTGGGAAAGAAATTCAAGGACACATTTGGGCATTCCGGAAATTCCATATTGAGTGGATTTGTGGGCATGAAGAGAGCAGAAAATCATGGAGTTCCATACTCTTTAACAGAGGAATTTGCTAGTGTCTATAGAATGCATCCACTCCTGCCTGATTTCCTGCATTTGAGAGACACATCTGTCTCTCCGGGGCCTAACAAATCTCCACCATTAATCAAAGAGATTCCTATGAACGATTTGATCGGACTACAAGGAGAGAAGACCTTAATAGAGATAGGAGTTCAAAAACAATTGGTATCAATGGGTCACCAAGCTTGTGGGGCCCTAGAACTTTGGAACTATCCATCATGGCTCAGAGACCTAGTACCACATAATGCAGATGGCACAGAAAGATCTAACCATGTGGACTTGGCTGCTCTTGAAATTTACAGGGATAGAGAGAGAGGTGTAGCAAGATATAACCAATTCAGGAGAGGACTATTCATGATACCTATCTCTAAATGGGAAGATTTAACAGATGATAAGGAAGTAATCAAAGTATTGGAAGAGATATATGGTGATGATGTTGAGGAGCTTGATGTGCTAGTAGGTCTCATGGCAGAGAAGAAGATAAAGGGTTTTGCAATTAGTGAGACAGCTTTTTTAATCTTCCTTCTCATGGCATCTAGGAGGCTAGAGGGTGATAGATTTTTCACAAGCAACTACAATGAGGAGACATACACTGAAAAGGGTTTGAAATGGGTGAACACTACTGAAACCTTAAAGGATGTGATTGATCGTCACTACCCAAAAATGACACACAAATGGTTGAATGCTTCAAGTGCTTTCTCTGTTTGGGATGCACCACCAAACAAACACAACCCTATTCCAATTTACTTGCGTGTTCCTAGTTAA

Protein sequence

>MsG0680030613.01.T01

MQIWRDVNLWDSIDKALRRNYNMDATIYALLQQLNASQIELFITMMWSIWNIRNLKLWQQKNETNAQVVERLTHLLDGWKEAKIIRSGKNLIANMQQPSPTHKIPFIGKNQEEIVHSIDKLGIWHRMPVFLGLIYLAIRRHLHQEYNLINVGTTPVGVRSNPTDFPYRTADGRYNDPFNENAGSQGSFFGRNILPVDQKKELLKPDPMVVATKLLERRTYKDTGKQFNVIAASWIQFMIHDWIDHMEDTQQIELIAPREVANQCPLKSFKFFKTKEIPTGFYEVQTGHANIRTPWWDGSVIYGSNQEVLDKVRTFKDGKIKISKEGELLHNEDGTAISGDIRNSWAGVTTLQTLFVLEHNAVCDSLKKEYPDLEDEDLYRYARLVTSAVIAKIHTIDWTVELLKTDTLLGGMRANWYGLLGKKFKDTFGHSGNSILSGFVGMKRAENHGVPYSLTEEFASVYRMHPLLPDFLHLRDTSVSPGPNKSPPLIKEIPMNDLIGLQGEKTLIEIGVQKQLVSMGHQACGALELWNYPSWLRDLVPHNADGTERSNHVDLAALEIYRDRERGVARYNQFRRGLFMIPISKWEDLTDDKEVIKVLEEIYGDDVEELDVLVGLMAEKKIKGFAISETAFLIFLLMASRRLEGDRFFTSNYNEETYTEKGLKWVNTTETLKDVIDRHYPKMTHKWLNASSAFSVWDAPPNKHNPIPIYLRVPS*