Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036586.01.T01 | ABY91222.1 | 83.482 | 224 | 37 | 0 | 1 | 224 | 206 | 429 | 1.49E-131 | 388 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036586.01.T01 | Q940Z5 | 35.841 | 226 | 131 | 8 | 5 | 224 | 234 | 451 | 4.75E-33 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036586.01.T01 | G7L650 | 83.482 | 224 | 37 | 0 | 1 | 224 | 232 | 455 | 7.44e-132 | 389 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048560.01 | MsG0780036586.01 | 0.808363 | 3.213713e-50 | 1.834015e-47 |
| MsG0080048896.01 | MsG0780036586.01 | 0.800242 | 1.580005e-48 | 7.320300e-46 |
| MsG0080048992.01 | MsG0780036586.01 | 0.831006 | 2.131322e-55 | 2.283461e-52 |
| MsG0080049016.01 | MsG0780036586.01 | 0.838749 | 2.390761e-57 | 3.232521e-54 |
| MsG0080049018.01 | MsG0780036586.01 | 0.834010 | 3.837409e-56 | 4.495782e-53 |
| MsG0080049043.01 | MsG0780036586.01 | -0.817669 | 2.925603e-52 | 2.144137e-49 |
| MsG0180000127.01 | MsG0780036586.01 | 0.805597 | 1.236300e-49 | 6.567340e-47 |
| MsG0180000138.01 | MsG0780036586.01 | -0.848266 | 6.837911e-60 | 1.247846e-56 |
| MsG0180000417.01 | MsG0780036586.01 | 0.805678 | 1.188935e-49 | 6.329133e-47 |
| MsG0180000502.01 | MsG0780036586.01 | 0.811019 | 8.628977e-51 | 5.283146e-48 |
| MsG0180000719.01 | MsG0780036586.01 | 0.820854 | 5.503653e-53 | 4.405615e-50 |
| MsG0180001054.01 | MsG0780036586.01 | 0.811265 | 7.632247e-51 | 4.702849e-48 |
| MsG0180001084.01 | MsG0780036586.01 | -0.805106 | 1.566543e-49 | 8.217461e-47 |
| MsG0180003274.01 | MsG0780036586.01 | 0.810541 | 1.095219e-50 | 6.619681e-48 |
| MsG0180003336.01 | MsG0780036586.01 | 0.824180 | 9.278955e-54 | 8.158735e-51 |
| MsG0180003649.01 | MsG0780036586.01 | 0.839761 | 1.305863e-57 | 1.821218e-54 |
| MsG0180004187.01 | MsG0780036586.01 | 0.815586 | 8.568923e-52 | 5.931866e-49 |
| MsG0180004301.01 | MsG0780036586.01 | 0.800837 | 1.194929e-48 | 5.620640e-46 |
| MsG0180004302.01 | MsG0780036586.01 | 0.803291 | 3.738946e-49 | 1.871772e-46 |
| MsG0180004322.01 | MsG0780036586.01 | 0.801294 | 9.638709e-49 | 4.586436e-46 |
| MsG0180004458.01 | MsG0780036586.01 | 0.809901 | 1.505054e-50 | 8.945461e-48 |
| MsG0180004504.01 | MsG0780036586.01 | 0.804353 | 2.250104e-49 | 1.157638e-46 |
| MsG0180004586.01 | MsG0780036586.01 | 0.800557 | 1.363027e-48 | 6.365798e-46 |
| MsG0180004937.01 | MsG0780036586.01 | 0.892015 | 2.342113e-74 | 2.102068e-70 |
| MsG0180005767.01 | MsG0780036586.01 | 0.802771 | 4.790222e-49 | 2.366549e-46 |
| MsG0180005791.01 | MsG0780036586.01 | 0.813460 | 2.531037e-51 | 1.653996e-48 |
| MsG0180005811.01 | MsG0780036586.01 | 0.808956 | 2.400285e-50 | 1.391202e-47 |
| MsG0280010625.01 | MsG0780036586.01 | 0.827207 | 1.776710e-54 | 1.703805e-51 |
| MsG0280010803.01 | MsG0780036586.01 | 0.806123 | 9.581849e-50 | 5.159273e-47 |
| MsG0280010994.01 | MsG0780036586.01 | 0.842804 | 2.066804e-58 | 3.169534e-55 |
| MsG0280011066.01 | MsG0780036586.01 | 0.840415 | 8.815331e-58 | 1.254838e-54 |
| MsG0280011113.01 | MsG0780036586.01 | 0.811086 | 8.345576e-51 | 5.118340e-48 |
| MsG0280011189.01 | MsG0780036586.01 | 0.806320 | 8.708709e-50 | 4.712689e-47 |
| MsG0380011673.01 | MsG0780036586.01 | 0.821056 | 4.945869e-53 | 3.981642e-50 |
| MsG0380012443.01 | MsG0780036586.01 | 0.804290 | 2.319288e-49 | 1.191287e-46 |
| MsG0380012444.01 | MsG0780036586.01 | 0.833900 | 4.087659e-56 | 4.773714e-53 |
| MsG0380014030.01 | MsG0780036586.01 | 0.808770 | 2.629954e-50 | 1.516785e-47 |
| MsG0380014050.01 | MsG0780036586.01 | 0.807223 | 5.614302e-50 | 3.109663e-47 |
| MsG0380014129.01 | MsG0780036586.01 | 0.825421 | 4.731406e-54 | 4.310346e-51 |
| MsG0380014553.01 | MsG0780036586.01 | 0.802003 | 6.895555e-49 | 3.340472e-46 |
| MsG0380014557.01 | MsG0780036586.01 | 0.823318 | 1.477615e-53 | 1.267916e-50 |
| MsG0680030875.01 | MsG0780036586.01 | 0.800788 | 1.222769e-48 | 5.744131e-46 |
| MsG0680031789.01 | MsG0780036586.01 | 0.821388 | 4.145469e-53 | 3.367951e-50 |
| MsG0680034431.01 | MsG0780036586.01 | 0.882467 | 1.016715e-70 | 6.199853e-67 |
| MsG0680034724.01 | MsG0780036586.01 | 0.838683 | 2.486625e-57 | 3.355584e-54 |
| MsG0680035612.01 | MsG0780036586.01 | 0.822218 | 2.664026e-53 | 2.215785e-50 |
| MsG0480018983.01 | MsG0780036586.01 | 0.801462 | 8.901962e-49 | 4.253802e-46 |
| MsG0480020233.01 | MsG0780036586.01 | 0.817070 | 3.991038e-52 | 2.877344e-49 |
| MsG0480020393.01 | MsG0780036586.01 | 0.832560 | 8.814751e-56 | 9.888827e-53 |
| MsG0480020550.01 | MsG0780036586.01 | 0.827910 | 1.204921e-54 | 1.179328e-51 |
| MsG0480021151.01 | MsG0780036586.01 | 0.839949 | 1.166507e-57 | 1.636693e-54 |
| MsG0480021420.01 | MsG0780036586.01 | 0.839631 | 1.411694e-57 | 1.961090e-54 |
| MsG0480021563.01 | MsG0780036586.01 | 0.817087 | 3.954598e-52 | 2.852361e-49 |
| MsG0480021915.01 | MsG0780036586.01 | 0.805848 | 1.094959e-49 | 5.854525e-47 |
| MsG0480022581.01 | MsG0780036586.01 | 0.837364 | 5.428934e-57 | 7.035781e-54 |
| MsG0480022591.01 | MsG0780036586.01 | 0.808206 | 3.470981e-50 | 1.972631e-47 |
| MsG0480023006.01 | MsG0780036586.01 | 0.821649 | 3.608201e-53 | 2.952954e-50 |
| MsG0480023056.01 | MsG0780036586.01 | 0.820502 | 6.632433e-53 | 5.257022e-50 |
| MsG0480023332.01 | MsG0780036586.01 | 0.800070 | 1.712265e-48 | 7.898770e-46 |
| MsG0480023364.01 | MsG0780036586.01 | -0.800304 | 1.534378e-48 | 7.120604e-46 |
| MsG0480023371.01 | MsG0780036586.01 | 0.810716 | 1.003600e-50 | 6.094909e-48 |
| MsG0480023505.01 | MsG0780036586.01 | 0.802243 | 6.154100e-49 | 2.999663e-46 |
| MsG0480023577.01 | MsG0780036586.01 | 0.802081 | 6.644169e-49 | 3.225146e-46 |
| MsG0480023708.01 | MsG0780036586.01 | 0.845431 | 4.077913e-59 | 6.793982e-56 |
| MsG0580024192.01 | MsG0780036586.01 | 0.820418 | 6.933406e-53 | 5.483241e-50 |
| MsG0580024269.01 | MsG0780036586.01 | 0.810662 | 1.031103e-50 | 6.252746e-48 |
| MsG0580024493.01 | MsG0780036586.01 | 0.800682 | 1.285263e-48 | 6.021547e-46 |
| MsG0580024567.01 | MsG0780036586.01 | 0.824534 | 7.661127e-54 | 6.804907e-51 |
| MsG0580024688.01 | MsG0780036586.01 | 0.817696 | 2.884482e-52 | 2.115530e-49 |
| MsG0580024763.01 | MsG0780036586.01 | 0.833343 | 5.631981e-56 | 6.468259e-53 |
| MsG0580024768.01 | MsG0780036586.01 | 0.810988 | 8.764471e-51 | 5.361965e-48 |
| MsG0580025445.01 | MsG0780036586.01 | 0.818749 | 1.666195e-52 | 1.257961e-49 |
| MsG0580026024.01 | MsG0780036586.01 | 0.822132 | 2.790113e-53 | 2.315009e-50 |
| MsG0580026026.01 | MsG0780036586.01 | 0.809057 | 2.283435e-50 | 1.327097e-47 |
| MsG0380015353.01 | MsG0780036586.01 | 0.820818 | 5.611436e-53 | 4.487128e-50 |
| MsG0380015530.01 | MsG0780036586.01 | 0.821347 | 4.238286e-53 | 3.439339e-50 |
| MsG0380015628.01 | MsG0780036586.01 | 0.833673 | 4.659089e-56 | 5.403144e-53 |
| MsG0380016066.01 | MsG0780036586.01 | 0.801209 | 1.003243e-48 | 4.763462e-46 |
| MsG0380016492.01 | MsG0780036586.01 | 0.848007 | 8.061440e-60 | 1.458873e-56 |
| MsG0380016531.01 | MsG0780036586.01 | 0.837612 | 4.691141e-57 | 6.126638e-54 |
| MsG0380016723.01 | MsG0780036586.01 | 0.871542 | 6.310947e-67 | 2.555334e-63 |
| MsG0380016881.01 | MsG0780036586.01 | 0.827572 | 1.452512e-54 | 1.407603e-51 |
| MsG0380017227.01 | MsG0780036586.01 | 0.853577 | 2.179794e-61 | 4.732171e-58 |
| MsG0380017385.01 | MsG0780036586.01 | 0.810913 | 9.097735e-51 | 5.554354e-48 |
| MsG0380018070.01 | MsG0780036586.01 | -0.802483 | 5.492207e-49 | 2.693381e-46 |
| MsG0480018088.01 | MsG0780036586.01 | 0.842863 | 1.994589e-58 | 3.064444e-55 |
| MsG0480018089.01 | MsG0780036586.01 | 0.821685 | 3.539646e-53 | 2.899865e-50 |
| MsG0580027095.01 | MsG0780036586.01 | 0.804367 | 2.235159e-49 | 1.150355e-46 |
| MsG0580027098.01 | MsG0780036586.01 | 0.817037 | 4.058871e-52 | 2.923634e-49 |
| MsG0580027099.01 | MsG0780036586.01 | 0.841863 | 3.670092e-58 | 5.464869e-55 |
| MsG0580027249.01 | MsG0780036586.01 | 0.801360 | 9.340884e-49 | 4.452168e-46 |
| MsG0580027254.01 | MsG0780036586.01 | 0.820902 | 5.365513e-53 | 4.300727e-50 |
| MsG0580028107.01 | MsG0780036586.01 | -0.818432 | 1.966142e-52 | 1.471580e-49 |
| MsG0580029673.01 | MsG0780036586.01 | 0.840211 | 9.966092e-58 | 1.409734e-54 |
| MsG0580029706.01 | MsG0780036586.01 | 0.872495 | 3.042790e-67 | 1.276148e-63 |
| MsG0580029820.01 | MsG0780036586.01 | 0.846597 | 1.965810e-59 | 3.401033e-56 |
| MsG0580029881.01 | MsG0780036586.01 | 0.831054 | 2.074594e-55 | 2.225830e-52 |
| MsG0680030441.01 | MsG0780036586.01 | 0.809089 | 2.248452e-50 | 1.307885e-47 |
| MsG0280006534.01 | MsG0780036586.01 | 0.814305 | 1.648669e-51 | 1.102315e-48 |
| MsG0280007142.01 | MsG0780036586.01 | 0.850763 | 1.376171e-60 | 2.724605e-57 |
| MsG0280007600.01 | MsG0780036586.01 | 0.838006 | 3.716542e-57 | 4.913131e-54 |
| MsG0280009864.01 | MsG0780036586.01 | 0.806773 | 6.991408e-50 | 3.827358e-47 |
| MsG0280010461.01 | MsG0780036586.01 | 0.833042 | 6.693253e-56 | 7.617776e-53 |
| MsG0780036586.01 | MsG0780036925.01 | 0.829820 | 4.155615e-55 | 4.301724e-52 |
| MsG0780036586.01 | MsG0780037915.01 | 0.824736 | 6.867697e-54 | 6.136150e-51 |
| MsG0780036586.01 | MsG0780037963.01 | 0.836066 | 1.163309e-56 | 1.449727e-53 |
| MsG0780036586.01 | MsG0780038030.01 | 0.829675 | 4.507826e-55 | 4.646022e-52 |
| MsG0780036586.01 | MsG0780038108.01 | 0.837726 | 4.385774e-57 | 5.748313e-54 |
| MsG0780036586.01 | MsG0780038573.01 | 0.812333 | 4.470377e-51 | 2.834492e-48 |
| MsG0780036586.01 | MsG0780039315.01 | 0.867548 | 1.262007e-65 | 4.423548e-62 |
| MsG0780036586.01 | MsG0780039401.01 | 0.813993 | 1.931406e-51 | 1.280399e-48 |
| MsG0780036586.01 | MsG0780039510.01 | 0.806496 | 7.997732e-50 | 4.347367e-47 |
| MsG0780036586.01 | MsG0780040174.01 | -0.803992 | 2.675273e-49 | 1.363721e-46 |
| MsG0780036586.01 | MsG0780040321.01 | 0.803749 | 3.004285e-49 | 1.521862e-46 |
| MsG0780036586.01 | MsG0780040350.01 | 0.816375 | 5.712493e-52 | 4.040865e-49 |
| MsG0780036586.01 | MsG0780040429.01 | 0.805066 | 1.596793e-49 | 8.367833e-47 |
| MsG0780036586.01 | MsG0780040838.01 | 0.819211 | 1.308097e-52 | 1.000297e-49 |
| MsG0780036586.01 | MsG0780040849.01 | 0.882694 | 8.402097e-71 | 5.168227e-67 |
| MsG0780036586.01 | MsG0780041022.01 | 0.842937 | 1.905250e-58 | 2.933915e-55 |
| MsG0780036586.01 | MsG0780041024.01 | 0.858352 | 8.739887e-63 | 2.224033e-59 |
| MsG0780036586.01 | MsG0780041121.01 | 0.828387 | 9.250203e-55 | 9.181024e-52 |
| MsG0780036586.01 | MsG0780041618.01 | 0.805882 | 1.077040e-49 | 5.763608e-47 |
| MsG0780036586.01 | MsG0780041807.01 | 0.815870 | 7.407591e-52 | 5.167770e-49 |
| MsG0780036586.01 | MsG0880042006.01 | 0.809601 | 1.746042e-50 | 1.029655e-47 |
| MsG0780036586.01 | MsG0880042021.01 | 0.801580 | 8.420955e-49 | 4.035864e-46 |
| MsG0780036586.01 | MsG0880042921.01 | 0.802343 | 5.867897e-49 | 2.867525e-46 |
| MsG0780036586.01 | MsG0880043069.01 | 0.804887 | 1.740776e-49 | 9.081114e-47 |
| MsG0780036586.01 | MsG0880043515.01 | 0.824082 | 9.786510e-54 | 8.580941e-51 |
| MsG0780036586.01 | MsG0880043624.01 | 0.803315 | 3.696465e-49 | 1.851632e-46 |
| MsG0780036586.01 | MsG0880044436.01 | 0.805853 | 1.092164e-49 | 5.840435e-47 |
| MsG0780036586.01 | MsG0880044968.01 | 0.827946 | 1.181108e-54 | 1.157265e-51 |
| MsG0780036586.01 | MsG0880045252.01 | 0.802452 | 5.572438e-49 | 2.730674e-46 |
| MsG0780036586.01 | MsG0880045274.01 | 0.801822 | 7.512266e-49 | 3.622601e-46 |
| MsG0780036586.01 | MsG0880045283.01 | 0.810582 | 1.072762e-50 | 6.491393e-48 |
| MsG0780036586.01 | MsG0880045412.01 | 0.825606 | 4.276956e-54 | 3.917105e-51 |
| MsG0780036586.01 | MsG0880045755.01 | 0.827206 | 1.777948e-54 | 1.704932e-51 |
| MsG0780036586.01 | MsG0880045839.01 | 0.827032 | 1.957128e-54 | 1.867083e-51 |
| MsG0780036586.01 | MsG0880045991.01 | -0.829517 | 4.925932e-55 | 5.053022e-52 |
| MsG0780036586.01 | MsG0880046189.01 | 0.814474 | 1.512284e-51 | 1.015787e-48 |
| MsG0780036586.01 | MsG0880046288.01 | 0.809781 | 1.597036e-50 | 9.462818e-48 |
| MsG0780036586.01 | MsG0880046456.01 | 0.813382 | 2.633596e-51 | 1.717271e-48 |
| MsG0780036586.01 | MsG0880046856.01 | 0.881675 | 1.970470e-70 | 1.165044e-66 |
| MsG0780036586.01 | MsG0880047107.01 | 0.817324 | 3.497637e-52 | 2.539199e-49 |
| MsG0780036586.01 | MsG0880047251.01 | 0.843921 | 1.040774e-58 | 1.653421e-55 |
| MsG0780036586.01 | MsG0880047313.01 | 0.804541 | 2.055799e-49 | 1.062775e-46 |
| MsG0780036586.01 | MsG0880047406.01 | 0.844645 | 6.651732e-59 | 1.080848e-55 |
| MsG0780036586.01 | MsG0880047643.01 | 0.824895 | 6.298453e-54 | 5.653368e-51 |
| MsG0780036586.01 | MsG0880047660.01 | 0.843210 | 1.612253e-58 | 2.504224e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036586.01.T01 | MTR_7g014160 | 83.482 | 224 | 37 | 0 | 1 | 224 | 232 | 455 | 1.89e-135 | 389 |
| MsG0780036586.01.T01 | MTR_7g014610 | 73.333 | 225 | 59 | 1 | 1 | 224 | 233 | 457 | 1.36e-118 | 346 |
| MsG0780036586.01.T01 | MTR_7g014200 | 69.333 | 225 | 66 | 2 | 1 | 224 | 228 | 450 | 1.42e-110 | 325 |
| MsG0780036586.01.T01 | MTR_7g014670 | 89.697 | 165 | 17 | 0 | 60 | 224 | 77 | 241 | 3.35e-107 | 309 |
| MsG0780036586.01.T01 | MTR_7g014620 | 65.366 | 205 | 66 | 2 | 24 | 223 | 213 | 417 | 3.64e-86 | 262 |
| MsG0780036586.01.T01 | MTR_7g013850 | 49.115 | 226 | 108 | 4 | 5 | 224 | 238 | 462 | 3.88e-67 | 214 |
| MsG0780036586.01.T01 | MTR_7g014230 | 40.404 | 198 | 109 | 5 | 8 | 204 | 232 | 421 | 7.06e-36 | 132 |
| MsG0780036586.01.T01 | MTR_7g014630 | 89.394 | 66 | 7 | 0 | 1 | 66 | 234 | 299 | 1.55e-33 | 124 |
| MsG0780036586.01.T01 | MTR_6g015815 | 34.545 | 220 | 129 | 5 | 8 | 224 | 237 | 444 | 3.08e-32 | 122 |
| MsG0780036586.01.T01 | MTR_7g014330 | 39.130 | 184 | 104 | 4 | 22 | 204 | 243 | 419 | 6.45e-32 | 121 |
| MsG0780036586.01.T01 | MTR_6g015315 | 35.000 | 220 | 130 | 5 | 8 | 224 | 227 | 436 | 7.34e-32 | 120 |
| MsG0780036586.01.T01 | MTR_6g015830 | 34.091 | 220 | 129 | 6 | 8 | 224 | 238 | 444 | 6.76e-31 | 118 |
| MsG0780036586.01.T01 | MTR_6g015850 | 33.333 | 222 | 128 | 6 | 8 | 224 | 235 | 441 | 2.30e-30 | 117 |
| MsG0780036586.01.T01 | MTR_7g014250 | 35.859 | 198 | 118 | 5 | 8 | 204 | 230 | 419 | 7.16e-30 | 115 |
| MsG0780036586.01.T01 | MTR_6g015320 | 35.526 | 228 | 117 | 11 | 8 | 224 | 230 | 438 | 2.21e-26 | 105 |
| MsG0780036586.01.T01 | MTR_7g014360 | 34.574 | 188 | 87 | 5 | 22 | 204 | 193 | 349 | 4.03e-25 | 101 |
| MsG0780036586.01.T01 | MTR_3g087640 | 34.872 | 195 | 115 | 5 | 22 | 209 | 252 | 441 | 5.19e-24 | 99.4 |
| MsG0780036586.01.T01 | MTR_2g089735 | 34.634 | 205 | 116 | 7 | 13 | 209 | 236 | 430 | 6.02e-24 | 99.4 |
| MsG0780036586.01.T01 | MTR_8g012750 | 34.574 | 188 | 101 | 4 | 25 | 200 | 251 | 428 | 2.98e-23 | 97.4 |
| MsG0780036586.01.T01 | MTR_3g028210 | 34.419 | 215 | 127 | 5 | 18 | 224 | 240 | 448 | 3.51e-23 | 97.1 |
| MsG0780036586.01.T01 | MTR_7g014310 | 37.500 | 144 | 85 | 3 | 62 | 204 | 147 | 286 | 1.88e-22 | 93.2 |
| MsG0780036586.01.T01 | MTR_2g089670 | 29.775 | 178 | 113 | 3 | 23 | 200 | 270 | 435 | 2.85e-21 | 91.7 |
| MsG0780036586.01.T01 | MTR_2g089765 | 31.282 | 195 | 119 | 4 | 23 | 209 | 262 | 449 | 3.98e-21 | 91.3 |
| MsG0780036586.01.T01 | MTR_2g089755 | 34.872 | 195 | 113 | 7 | 22 | 209 | 257 | 444 | 7.52e-20 | 87.8 |
| MsG0780036586.01.T01 | MTR_2g089650 | 34.359 | 195 | 114 | 7 | 22 | 209 | 245 | 432 | 1.84e-18 | 83.6 |
| MsG0780036586.01.T01 | MTR_7g014205 | 35.246 | 122 | 66 | 3 | 84 | 204 | 5 | 114 | 1.80e-16 | 73.2 |
| MsG0780036586.01.T01 | MTR_7g014210 | 38.889 | 108 | 63 | 3 | 99 | 204 | 24 | 130 | 7.76e-15 | 70.1 |
| MsG0780036586.01.T01 | MTR_7g015860 | 27.586 | 203 | 118 | 6 | 25 | 214 | 246 | 432 | 9.58e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036586.01.T01 | AT5G39050 | 35.841 | 226 | 131 | 8 | 5 | 224 | 234 | 451 | 4.84e-34 | 127 |
| MsG0780036586.01.T01 | AT5G39080 | 33.921 | 227 | 133 | 9 | 5 | 224 | 229 | 445 | 1.25e-29 | 115 |
| MsG0780036586.01.T01 | AT3G29670 | 33.482 | 224 | 131 | 6 | 5 | 224 | 224 | 433 | 2.64e-27 | 108 |
| MsG0780036586.01.T01 | AT3G29590 | 33.333 | 207 | 121 | 6 | 8 | 209 | 221 | 415 | 2.74e-26 | 105 |
| MsG0780036586.01.T01 | AT3G29635 | 30.870 | 230 | 139 | 7 | 2 | 224 | 222 | 438 | 2.28e-23 | 97.8 |
| MsG0780036586.01.T01 | AT5G39090 | 31.982 | 222 | 130 | 12 | 10 | 224 | 224 | 431 | 3.00e-22 | 94.4 |
| MsG0780036586.01.T01 | AT5G61160 | 28.319 | 226 | 146 | 6 | 4 | 224 | 220 | 434 | 3.03e-21 | 91.7 |
| MsG0780036586.01.T01 | AT3G29680 | 28.761 | 226 | 141 | 7 | 5 | 224 | 220 | 431 | 7.20e-21 | 90.5 |
| MsG0780036586.01.T01 | AT1G03940 | 30.769 | 208 | 113 | 7 | 22 | 214 | 245 | 436 | 4.39e-20 | 88.6 |
| MsG0780036586.01.T01 | AT3G29690 | 29.496 | 139 | 81 | 4 | 92 | 221 | 33 | 163 | 4.03e-13 | 65.9 |
Find 50 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTACCAAATAACTATTT+TGG | 0.135502 | 7:+10135318 | MsG0780036586.01.T01:CDS |
| AGCAAATGGTGTTATCAAAA+TGG | 0.235256 | 7:+10135124 | MsG0780036586.01.T01:CDS |
| GTTATCAAAATGGGAGTTAT+TGG | 0.250356 | 7:+10135134 | MsG0780036586.01.T01:CDS |
| GGTGTTTATGAGATTGATTT+TGG | 0.265782 | 7:+10135552 | MsG0780036586.01.T01:CDS |
| CAATTTCCAAAATAGTTATT+TGG | 0.276645 | 7:-10135324 | None:intergenic |
| AGCAATTCATGGAATTAAAA+TGG | 0.285041 | 7:+10135239 | MsG0780036586.01.T01:CDS |
| TGCTTATGCCCTTGTTTGTT+TGG | 0.306724 | 7:+10135212 | MsG0780036586.01.T01:CDS |
| CGAAGAGAGTCTTCGAGCTT+TGG | 0.323617 | 7:-10135060 | None:intergenic |
| AAGATGTTCCCAAATGAAAA+AGG | 0.331198 | 7:+10135003 | None:intergenic |
| GAGAAAGAGAAGTTTGCATT+TGG | 0.340510 | 7:+10135261 | MsG0780036586.01.T01:CDS |
| GAAACTATCTCCACCTTTGT+TGG | 0.379376 | 7:-10135585 | None:intergenic |
| AGTGAAGGATTTGAAATAAT+AGG | 0.395317 | 7:+10135507 | MsG0780036586.01.T01:CDS |
| AAATTGTGTGTGGGGACATT+TGG | 0.398292 | 7:+10135341 | MsG0780036586.01.T01:CDS |
| TACCATCTTTGCTCTCTGCC+AGG | 0.406929 | 7:-10135631 | None:intergenic |
| TGTTTGGCAAAAGCAATTCA+TGG | 0.416726 | 7:+10135228 | MsG0780036586.01.T01:CDS |
| GTGGCGGGATCTAATAGATT+TGG | 0.423530 | 7:+10135531 | MsG0780036586.01.T01:CDS |
| AATAAAGATGATAAATGAAA+AGG | 0.424032 | 7:+10135434 | MsG0780036586.01.T01:CDS |
| GGTAAAGGTGGAATTGAAGT+TGG | 0.427876 | 7:+10135650 | MsG0780036586.01.T01:CDS |
| GCAAATGGTGTTATCAAAAT+GGG | 0.431457 | 7:+10135125 | MsG0780036586.01.T01:CDS |
| GAGATAGTTTCGGTGGATAG+AGG | 0.442745 | 7:+10135597 | MsG0780036586.01.T01:CDS |
| TTCAATTATTTGTCAAGTGA+AGG | 0.447336 | 7:+10135492 | MsG0780036586.01.T01:CDS |
| ATAAAGATGATAAATGAAAA+GGG | 0.447547 | 7:+10135435 | MsG0780036586.01.T01:CDS |
| AATGAAAAGGGTGTTCTTGA+AGG | 0.453937 | 7:+10135447 | MsG0780036586.01.T01:CDS |
| TTGGATTACATAAATGAAGA+TGG | 0.466086 | 7:+10135378 | MsG0780036586.01.T01:CDS |
| GTAAAGGTGGAATTGAAGTT+GGG | 0.475472 | 7:+10135651 | MsG0780036586.01.T01:CDS |
| GAGAACAAACGATGATAAAG+TGG | 0.484849 | 7:-10135184 | None:intergenic |
| TTTGAACAAGATAAAGCAAA+TGG | 0.487133 | 7:+10135110 | MsG0780036586.01.T01:CDS |
| GTTCTTGAAGGAGCTAGTGA+TGG | 0.493087 | 7:+10135459 | MsG0780036586.01.T01:CDS |
| TTCTTGAAGGAGCTAGTGAT+GGG | 0.497785 | 7:+10135460 | MsG0780036586.01.T01:CDS |
| AACAAAGGTGGAGATAGTTT+CGG | 0.498546 | 7:+10135587 | MsG0780036586.01.T01:CDS |
| TGGATTACATAAATGAAGAT+GGG | 0.512542 | 7:+10135379 | MsG0780036586.01.T01:CDS |
| TTTGGTTGACACAAAACCGT+TGG | 0.520534 | 7:+10135359 | MsG0780036586.01.T01:CDS |
| AAATAGTTATTTGGTAGTGA+TGG | 0.521146 | 7:-10135315 | None:intergenic |
| GGCCTGGCAGAGAGCAAAGA+TGG | 0.534800 | 7:+10135629 | MsG0780036586.01.T01:CDS |
| TAACCTTGCTCTGCAATCTA+CGG | 0.549902 | 7:-10135289 | None:intergenic |
| TCTTCATTTATGTAATCCAA+CGG | 0.557148 | 7:-10135375 | None:intergenic |
| ATAGAGGTTTAACATTGGCC+TGG | 0.557519 | 7:+10135613 | MsG0780036586.01.T01:CDS |
| TTTGAAATAATAGGAGTGGC+GGG | 0.565832 | 7:+10135516 | MsG0780036586.01.T01:CDS |
| ATTTGAAATAATAGGAGTGG+CGG | 0.578943 | 7:+10135515 | MsG0780036586.01.T01:CDS |
| GCAGAGAGCAAAGATGGTAA+AGG | 0.579752 | 7:+10135635 | MsG0780036586.01.T01:CDS |
| TCACCGTAGATTGCAGAGCA+AGG | 0.607885 | 7:+10135286 | MsG0780036586.01.T01:CDS |
| GTGGGGAAGACCAACAAAGG+TGG | 0.612550 | 7:+10135575 | MsG0780036586.01.T01:CDS |
| GAGAGCAAAGATGGTAAAGG+TGG | 0.619484 | 7:+10135638 | MsG0780036586.01.T01:CDS |
| AGGATTTGAAATAATAGGAG+TGG | 0.624166 | 7:+10135512 | MsG0780036586.01.T01:CDS |
| TGGGTGGGGAAGACCAACAA+AGG | 0.627130 | 7:+10135572 | MsG0780036586.01.T01:CDS |
| AAAGGTGGAGATAGTTTCGG+TGG | 0.628419 | 7:+10135590 | MsG0780036586.01.T01:CDS |
| GGATTACATAAATGAAGATG+GGG | 0.640685 | 7:+10135380 | MsG0780036586.01.T01:CDS |
| GGTGGATAGAGGTTTAACAT+TGG | 0.647365 | 7:+10135608 | MsG0780036586.01.T01:CDS |
| ACAAACGATGATAAAGTGGG+TGG | 0.683948 | 7:-10135180 | None:intergenic |
| AGAACAAACGATGATAAAGT+GGG | 0.738379 | 7:-10135183 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAGATGATAAATGAAA+AGG | + | Chr7:10135434-10135453 | MsG0780036586.01.T01:CDS | 15.0% |
| !! | ATAAAGATGATAAATGAAAA+GGG | + | Chr7:10135435-10135454 | MsG0780036586.01.T01:CDS | 15.0% |
| !! | CAATTTCCAAAATAGTTATT+TGG | - | Chr7:10135327-10135346 | None:intergenic | 20.0% |
| ! | AGCAATTCATGGAATTAAAA+TGG | + | Chr7:10135239-10135258 | MsG0780036586.01.T01:CDS | 25.0% |
| ! | TCTTCATTTATGTAATCCAA+CGG | - | Chr7:10135378-10135397 | None:intergenic | 25.0% |
| ! | TGGATTACATAAATGAAGAT+GGG | + | Chr7:10135379-10135398 | MsG0780036586.01.T01:CDS | 25.0% |
| ! | TTCAATTATTTGTCAAGTGA+AGG | + | Chr7:10135492-10135511 | MsG0780036586.01.T01:CDS | 25.0% |
| ! | TTGGATTACATAAATGAAGA+TGG | + | Chr7:10135378-10135397 | MsG0780036586.01.T01:CDS | 25.0% |
| ! | TTTGAACAAGATAAAGCAAA+TGG | + | Chr7:10135110-10135129 | MsG0780036586.01.T01:CDS | 25.0% |
| !! | AGTGAAGGATTTGAAATAAT+AGG | + | Chr7:10135507-10135526 | MsG0780036586.01.T01:CDS | 25.0% |
| !! | TCACTACCAAATAACTATTT+TGG | + | Chr7:10135318-10135337 | MsG0780036586.01.T01:CDS | 25.0% |
| !!! | AAATAGTTATTTGGTAGTGA+TGG | - | Chr7:10135318-10135337 | None:intergenic | 25.0% |
| !!! | GTGTTTATGAGATTGATTTT+GGG | + | Chr7:10135553-10135572 | MsG0780036586.01.T01:CDS | 25.0% |
| !!! | TTTCGTTTCCTTTTTCATTT+GGG | - | Chr7:10135014-10135033 | None:intergenic | 25.0% |
| AGAACAAACGATGATAAAGT+GGG | - | Chr7:10135186-10135205 | None:intergenic | 30.0% | |
| GGATTACATAAATGAAGATG+GGG | + | Chr7:10135380-10135399 | MsG0780036586.01.T01:CDS | 30.0% | |
| GTTATCAAAATGGGAGTTAT+TGG | + | Chr7:10135134-10135153 | MsG0780036586.01.T01:CDS | 30.0% | |
| ! | AGGATTTGAAATAATAGGAG+TGG | + | Chr7:10135512-10135531 | MsG0780036586.01.T01:CDS | 30.0% |
| ! | ATTTGAAATAATAGGAGTGG+CGG | + | Chr7:10135515-10135534 | MsG0780036586.01.T01:CDS | 30.0% |
| !! | ACTATTTTGGAAATTGTGTG+TGG | + | Chr7:10135331-10135350 | MsG0780036586.01.T01:CDS | 30.0% |
| !! | AGCAAATGGTGTTATCAAAA+TGG | + | Chr7:10135124-10135143 | MsG0780036586.01.T01:CDS | 30.0% |
| !! | CTATTTTGGAAATTGTGTGT+GGG | + | Chr7:10135332-10135351 | MsG0780036586.01.T01:CDS | 30.0% |
| !! | CTTTCGTTTCCTTTTTCATT+TGG | - | Chr7:10135015-10135034 | None:intergenic | 30.0% |
| !! | GCAAATGGTGTTATCAAAAT+GGG | + | Chr7:10135125-10135144 | MsG0780036586.01.T01:CDS | 30.0% |
| !! | GGTGTTTATGAGATTGATTT+TGG | + | Chr7:10135552-10135571 | MsG0780036586.01.T01:CDS | 30.0% |
| !! | TATTTTGGAAATTGTGTGTG+GGG | + | Chr7:10135333-10135352 | MsG0780036586.01.T01:CDS | 30.0% |
| !! | TTATGAGATTGATTTTGGGT+GGG | + | Chr7:10135557-10135576 | MsG0780036586.01.T01:CDS | 30.0% |
| !! | TTTATGAGATTGATTTTGGG+TGG | + | Chr7:10135556-10135575 | MsG0780036586.01.T01:CDS | 30.0% |
| AACAAAGGTGGAGATAGTTT+CGG | + | Chr7:10135587-10135606 | MsG0780036586.01.T01:CDS | 35.0% | |
| GAGAAAGAGAAGTTTGCATT+TGG | + | Chr7:10135261-10135280 | MsG0780036586.01.T01:CDS | 35.0% | |
| GAGAACAAACGATGATAAAG+TGG | - | Chr7:10135187-10135206 | None:intergenic | 35.0% | |
| GTAAAGGTGGAATTGAAGTT+GGG | + | Chr7:10135651-10135670 | MsG0780036586.01.T01:CDS | 35.0% | |
| TGTTTGGCAAAAGCAATTCA+TGG | + | Chr7:10135228-10135247 | MsG0780036586.01.T01:CDS | 35.0% | |
| ! | TGCTTTTGCCAAACAAACAA+GGG | - | Chr7:10135223-10135242 | None:intergenic | 35.0% |
| ! | TTTGAAATAATAGGAGTGGC+GGG | + | Chr7:10135516-10135535 | MsG0780036586.01.T01:CDS | 35.0% |
| !! | AATGAAAAGGGTGTTCTTGA+AGG | + | Chr7:10135447-10135466 | MsG0780036586.01.T01:CDS | 35.0% |
| !! | TATGAGATTGATTTTGGGTG+GGG | + | Chr7:10135558-10135577 | MsG0780036586.01.T01:CDS | 35.0% |
| !! | TTGCTTTTGCCAAACAAACA+AGG | - | Chr7:10135224-10135243 | None:intergenic | 35.0% |
| AAATTGTGTGTGGGGACATT+TGG | + | Chr7:10135341-10135360 | MsG0780036586.01.T01:CDS | 40.0% | |
| ACAAACGATGATAAAGTGGG+TGG | - | Chr7:10135183-10135202 | None:intergenic | 40.0% | |
| ATAGAGGTTTAACATTGGCC+TGG | + | Chr7:10135613-10135632 | MsG0780036586.01.T01:CDS | 40.0% | |
| GAAACTATCTCCACCTTTGT+TGG | - | Chr7:10135588-10135607 | None:intergenic | 40.0% | |
| GGTAAAGGTGGAATTGAAGT+TGG | + | Chr7:10135650-10135669 | MsG0780036586.01.T01:CDS | 40.0% | |
| GGTGGATAGAGGTTTAACAT+TGG | + | Chr7:10135608-10135627 | MsG0780036586.01.T01:CDS | 40.0% | |
| TAACCTTGCTCTGCAATCTA+CGG | - | Chr7:10135292-10135311 | None:intergenic | 40.0% | |
| TTCTTGAAGGAGCTAGTGAT+GGG | + | Chr7:10135460-10135479 | MsG0780036586.01.T01:CDS | 40.0% | |
| TTTGGTTGACACAAAACCGT+TGG | + | Chr7:10135359-10135378 | MsG0780036586.01.T01:CDS | 40.0% | |
| ! | TGCTTATGCCCTTGTTTGTT+TGG | + | Chr7:10135212-10135231 | MsG0780036586.01.T01:CDS | 40.0% |
| AAAGGTGGAGATAGTTTCGG+TGG | + | Chr7:10135590-10135609 | MsG0780036586.01.T01:CDS | 45.0% | |
| GAGAGCAAAGATGGTAAAGG+TGG | + | Chr7:10135638-10135657 | MsG0780036586.01.T01:CDS | 45.0% | |
| GAGATAGTTTCGGTGGATAG+AGG | + | Chr7:10135597-10135616 | MsG0780036586.01.T01:CDS | 45.0% | |
| GCAGAGAGCAAAGATGGTAA+AGG | + | Chr7:10135635-10135654 | MsG0780036586.01.T01:CDS | 45.0% | |
| GTTCTTGAAGGAGCTAGTGA+TGG | + | Chr7:10135459-10135478 | MsG0780036586.01.T01:CDS | 45.0% | |
| ! | GTGGCGGGATCTAATAGATT+TGG | + | Chr7:10135531-10135550 | MsG0780036586.01.T01:CDS | 45.0% |
| CGAAGAGAGTCTTCGAGCTT+TGG | - | Chr7:10135063-10135082 | None:intergenic | 50.0% | |
| TACCATCTTTGCTCTCTGCC+AGG | - | Chr7:10135634-10135653 | None:intergenic | 50.0% | |
| TCACCGTAGATTGCAGAGCA+AGG | + | Chr7:10135286-10135305 | MsG0780036586.01.T01:CDS | 50.0% | |
| GTGGGGAAGACCAACAAAGG+TGG | + | Chr7:10135575-10135594 | MsG0780036586.01.T01:CDS | 55.0% | |
| TGGGTGGGGAAGACCAACAA+AGG | + | Chr7:10135572-10135591 | MsG0780036586.01.T01:CDS | 55.0% | |
| GGCCTGGCAGAGAGCAAAGA+TGG | + | Chr7:10135629-10135648 | MsG0780036586.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 10135006 | 10135683 | 10135006 | ID=MsG0780036586.01;Name=MsG0780036586.01 |
| Chr7 | mRNA | 10135006 | 10135683 | 10135006 | ID=MsG0780036586.01.T01;Parent=MsG0780036586.01;Name=MsG0780036586.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|225 |
| Chr7 | exon | 10135006 | 10135683 | 10135006 | ID=MsG0780036586.01.T01:exon:10400;Parent=MsG0780036586.01.T01 |
| Chr7 | CDS | 10135006 | 10135683 | 10135006 | ID=MsG0780036586.01.T01:cds;Parent=MsG0780036586.01.T01 |
| Gene Sequence |
| Protein sequence |
