AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018226.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018226.01.T01 MTR_4g007700 94.083 169 10 0 308 476 27 195 6.17e-108 318
MsG0480018226.01.T01 MTR_4g007700 94.083 169 10 0 308 476 41 209 1.79e-107 318
MsG0480018226.01.T01 MTR_6g464960 71.901 121 10 1 30 150 115 211 6.81e-50 170
MsG0480018226.01.T01 MTR_1g105085 92.308 78 6 0 73 150 1 78 3.20e-42 145
MsG0480018226.01.T01 MTR_2g079850 83.696 92 15 0 59 150 844 935 4.51e-42 160
MsG0480018226.01.T01 MTR_2g079850 83.696 92 15 0 59 150 996 1087 5.65e-42 160
MsG0480018226.01.T01 MTR_7g105760 72.000 100 22 1 57 150 148 247 1.11e-36 136
MsG0480018226.01.T01 MTR_6g009120 71.579 95 5 1 56 150 1 73 2.26e-36 129
MsG0480018226.01.T01 MTR_8g107170 73.810 84 16 1 60 137 97 180 2.09e-31 119
MsG0480018226.01.T01 MTR_5g071410 62.025 79 30 0 196 274 188 266 1.41e-28 114
MsG0480018226.01.T01 MTR_7g117585 58.228 79 33 0 196 274 65 143 2.25e-28 110
MsG0480018226.01.T01 MTR_6g086840 63.934 61 22 0 151 211 11 71 5.08e-19 83.6
MsG0480018226.01.T01 MTR_5g037350 58.667 75 21 1 124 198 493 557 2.05e-18 88.6
MsG0480018226.01.T01 MTR_8g069780 40.244 82 49 0 197 278 76 157 7.34e-16 75.5
MsG0480018226.01.T01 MTR_6g477950 44.444 81 45 0 195 275 63 143 2.68e-15 77.0
MsG0480018226.01.T01 MTR_6g466340 87.179 39 5 0 112 150 105 143 3.78e-15 73.2
MsG0480018226.01.T01 MTR_3g117130 44.928 69 38 0 197 265 199 267 2.94e-13 70.9
MsG0480018226.01.T01 MTR_6g018740 48.276 58 30 0 197 254 52 109 7.28e-13 66.6
MsG0480018226.01.T01 MTR_4g009290 85.294 34 5 0 214 247 1 34 1.26e-12 68.2
MsG0480018226.01.T01 MTR_3g073740 71.739 46 13 0 144 189 1 46 2.37e-12 63.5
MsG0480018226.01.T01 MTR_2g437520 44.444 72 37 1 197 265 121 192 2.43e-12 66.2
MsG0480018226.01.T01 MTR_2g013980 78.947 38 8 0 161 198 1148 1185 7.10e-12 68.6
MsG0480018226.01.T01 MTR_2g012700 32.530 83 54 1 192 272 33 115 1.72e-11 61.6
MsG0480018226.01.T01 MTR_2g087160 46.429 56 30 0 193 248 89 144 1.73e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018226.01.T01 AT1G80940 75.342 146 25 2 332 476 16 151 1.75e-65 208
MsG0480018226.01.T01 AT1G80940 75.342 146 25 2 332 476 78 213 1.89e-65 210
MsG0480018226.01.T01 AT1G80940 64.220 109 28 3 305 402 41 149 1.43e-35 130
MsG0480018226.01.T01 AT1G80940 46.535 101 43 3 294 383 30 130 2.37e-19 85.5

Find 108 sgRNAs with CRISPR-Local

Find 565 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTATCAAAGACCATATT+TGG 0.156995 4:-1883186 None:intergenic
GGCCTTCATCTCCCACTTCT+TGG 0.189164 4:-1889419 None:intergenic
TAACCTTTCTGTTCATTTCT+TGG 0.189299 4:-1888921 None:intergenic
CGGCCGTTGCTGTTCTTTAT+AGG 0.207088 4:-1888766 None:intergenic
TTCACAGCAGTATATATTAA+TGG 0.233912 4:-1881828 None:intergenic
TGATAGGTTGATCTTTGATT+TGG 0.286398 4:+1884035 MsG0480018226.01.T01:CDS
ATTTGAATCTCTGAGACTTT+AGG 0.296960 4:-1881894 None:intergenic
TGCCGAAGTTTCTGAGCTTT+CGG 0.303182 4:+1888711 MsG0480018226.01.T01:CDS
GGAGTATCTTCCGGTTGTTC+CGG 0.305331 4:-1888664 None:intergenic
GTTAAGGTTAAAGCTTCTTC+TGG 0.307830 4:+1885282 MsG0480018226.01.T01:CDS
CTGTTCTTTATAGGTTCTAA+TGG 0.315483 4:-1888757 None:intergenic
GTATATATTAATGGTTTGTT+AGG 0.326859 4:-1881819 None:intergenic
GAGTCCTGCATTTCCACATT+AGG 0.337528 4:-1888688 None:intergenic
GAGTATCTTCCGGTTGTTCC+GGG 0.342854 4:-1888663 None:intergenic
CTATCAGCAACTAGAGCATT+TGG 0.351728 4:+1879909 MsG0480018226.01.T01:CDS
TAAATTATAATTCATCTTCA+AGG 0.358878 4:-1889450 None:intergenic
ATATACTGCTGTGAATTCTA+AGG 0.361272 4:+1881836 MsG0480018226.01.T01:CDS
AACCATTAGAAAAGATTTAG+AGG 0.369865 4:+1883149 MsG0480018226.01.T01:CDS
GTGGATGAAGCTTTCTGTTA+AGG 0.377827 4:+1885266 MsG0480018226.01.T01:CDS
TCTTGCATTGCTTCGTTACT+CGG 0.380664 4:-1881930 None:intergenic
CAATGAGTTGGATCCAAATA+TGG 0.382094 4:+1883173 MsG0480018226.01.T01:CDS
CAATCCACAACAGGAAGAAA+TGG 0.395001 4:+1881955 MsG0480018226.01.T01:CDS
TGTGAATTCTAAGGTGAATC+AGG 0.405395 4:+1881845 MsG0480018226.01.T01:CDS
AAAACACCACCCGGAACAAC+CGG 0.406565 4:+1888654 MsG0480018226.01.T01:CDS
TCTTCTTACCACGGCGTCTA+CGG 0.406616 4:-1883061 None:intergenic
TTCATCTTCAAGGTTCATCT+TGG 0.411081 4:-1889440 None:intergenic
TCTTGAAAAGAAAGTATCTA+AGG 0.412171 4:+1883881 MsG0480018226.01.T01:CDS
AGATCAAATGGCGGAGAGTC+AGG 0.415531 4:+1883086 MsG0480018226.01.T01:CDS
TATCCAAAGGGATGGCTGAT+TGG 0.428780 4:+1888841 MsG0480018226.01.T01:CDS
TTATCCATTTCTTCCTGTTG+TGG 0.432151 4:-1881959 None:intergenic
ATATAGTAGTAGTATCAATA+TGG 0.432236 4:+1889551 MsG0480018226.01.T01:three_prime_UTR
TTTCCAATCAGCCATCCCTT+TGG 0.434651 4:-1888844 None:intergenic
TGTTAGTGTTATTACGAAGT+TGG 0.441193 4:-1881770 None:intergenic
TTGCAGGATAGAGAAATAGA+TGG 0.443528 4:+1889225 MsG0480018226.01.T01:intron
AACCTTTCCCTCCCTTATGA+TGG 0.447506 4:-1885331 None:intergenic
GCGACTTACAAGAGGGTGAT+AGG 0.454883 4:+1884019 MsG0480018226.01.T01:CDS
AGTCAGGTTAAAAGAGGTAG+AGG 0.455911 4:+1883102 MsG0480018226.01.T01:CDS
CCTTCTGCAACACCATCATA+AGG 0.456797 4:+1885319 MsG0480018226.01.T01:CDS
TAGGTTGATCTTTGATTTGG+AGG 0.463870 4:+1884038 MsG0480018226.01.T01:CDS
GTTACAAGAAACTGAGCAAA+TGG 0.465931 4:+1889386 MsG0480018226.01.T01:CDS
TATAGTAGTAGTATCAATAT+GGG 0.468650 4:+1889552 MsG0480018226.01.T01:three_prime_UTR
TCCTCCTAATGTGGAAATGC+AGG 0.470382 4:+1888684 MsG0480018226.01.T01:CDS
TGCAAGAATCAATCCACAAC+AGG 0.472379 4:+1881946 MsG0480018226.01.T01:CDS
TCAATGACAACTTCACTTCG+TGG 0.474770 4:+1881738 MsG0480018226.01.T01:CDS
GGCCAAGAAGTGGGAGATGA+AGG 0.479804 4:+1889417 MsG0480018226.01.T01:CDS
AGACATATAATTGCAAGGTT+AGG 0.481535 4:+1883932 MsG0480018226.01.T01:CDS
AACTCTTCAAAAGTGGTGAT+AGG 0.483908 4:+1881993 MsG0480018226.01.T01:CDS
TAGTTTGCAGACTCAAAATC+AGG 0.486553 4:-1888820 None:intergenic
AATTGCAAGGTTAGGACTGC+TGG 0.486975 4:+1883940 MsG0480018226.01.T01:CDS
AGATTTAGAGGTCAATGAGT+TGG 0.506040 4:+1883161 MsG0480018226.01.T01:CDS
CTTCTTACCACGGCGTCTAC+GGG 0.506246 4:-1883060 None:intergenic
AGATGGACTAAACGAACAGC+TGG 0.507521 4:+1889242 MsG0480018226.01.T01:CDS
ATTGCTTCGTTACTCGGTGG+AGG 0.519386 4:-1881924 None:intergenic
CTTCTGCAACACCATCATAA+GGG 0.525863 4:+1885320 MsG0480018226.01.T01:CDS
CACCATCATAAGGGAGGGAA+AGG 0.530323 4:+1885329 MsG0480018226.01.T01:CDS
TGAGCTTTCGGAGCGTCGAA+AGG 0.531699 4:+1888723 MsG0480018226.01.T01:CDS
TTTGATTACAGTGCATGGGC+TGG 0.532116 4:+1879933 MsG0480018226.01.T01:CDS
TCCTGCATTTCCACATTAGG+AGG 0.532301 4:-1888685 None:intergenic
AAGGATGACTTTAGAAGATG+TGG 0.532466 4:+1883900 MsG0480018226.01.T01:CDS
GAGTCTGCAAACTATCCAAA+GGG 0.537534 4:+1888829 MsG0480018226.01.T01:CDS
ACTGAGCAAATGGCAGATGA+AGG 0.541063 4:+1889396 MsG0480018226.01.T01:CDS
ACATTAGGAGGAGTATCTTC+CGG 0.541254 4:-1888673 None:intergenic
GGTAAGAAGAGTAGATCAAA+TGG 0.542550 4:+1883074 MsG0480018226.01.T01:CDS
CTTGCAGTTGGTGACAATCT+CGG 0.543009 4:+1879966 MsG0480018226.01.T01:CDS
CCTTATGATGGTGTTGCAGA+AGG 0.548621 4:-1885319 None:intergenic
GCTCTAGTTGCTGATAGAGT+TGG 0.556075 4:-1879903 None:intergenic
AACAGCTGGAGGAGGATTCG+CGG 0.559765 4:+1889256 MsG0480018226.01.T01:CDS
GGAAGATACTCCTCCTAATG+TGG 0.560591 4:+1888675 MsG0480018226.01.T01:CDS
TGAGTCTGCAAACTATCCAA+AGG 0.573463 4:+1888828 MsG0480018226.01.T01:CDS
AAGGTTAGGACTGCTGGCAG+AGG 0.574800 4:+1883946 MsG0480018226.01.T01:CDS
GCGGAGAGTCAGGTTAAAAG+AGG 0.577282 4:+1883096 MsG0480018226.01.T01:CDS
TGCATTGCTTCGTTACTCGG+TGG 0.583014 4:-1881927 None:intergenic
CGAGATTGTCACCAACTGCA+AGG 0.583431 4:-1879965 None:intergenic
TTGATCTACTCTTCTTACCA+CGG 0.584343 4:-1883070 None:intergenic
CGTAGACCGCGACTTACAAG+AGG 0.586650 4:+1884011 MsG0480018226.01.T01:CDS
CTCCGAAAGCTCAGAAACTT+CGG 0.590975 4:-1888713 None:intergenic
TGTCCAAGAAATGAACAGAA+AGG 0.592222 4:+1888918 MsG0480018226.01.T01:CDS
GAAGAAATGGATAAATGATG+AGG 0.594005 4:+1881968 MsG0480018226.01.T01:CDS
ATAGTAGTAGTATCAATATG+GGG 0.595387 4:+1889553 MsG0480018226.01.T01:three_prime_UTR
CTGCAAACTATCCAAAGGGA+TGG 0.596246 4:+1888833 MsG0480018226.01.T01:CDS
AAGCACAAGCATGCACACAC+TGG 0.598231 4:-1889476 None:intergenic
GGCAGATGAAGGCCAAGAAG+TGG 0.599174 4:+1889407 MsG0480018226.01.T01:CDS
GCAGACTCAAAATCAGGTGG+AGG 0.602642 4:-1888814 None:intergenic
TGAGGAGAACTCTTCAAAAG+TGG 0.605491 4:+1881986 MsG0480018226.01.T01:CDS
AAGACTCGGCAGAGAGTCGT+CGG 0.607206 4:-1888786 None:intergenic
AGGTTAGGACTGCTGGCAGA+GGG 0.609643 4:+1883947 MsG0480018226.01.T01:CDS
AATCTCTGAGACTTTAGGTG+AGG 0.614332 4:-1881889 None:intergenic
TATCTTCCGGTTGTTCCGGG+TGG 0.615204 4:-1888660 None:intergenic
TGCAACACCATCATAAGGGA+GGG 0.616543 4:+1885324 MsG0480018226.01.T01:CDS
AGGTGGAGGAAGCAAAGACT+CGG 0.620390 4:-1888800 None:intergenic
ACACAAGACATATAATTGCA+AGG 0.621590 4:+1883927 MsG0480018226.01.T01:CDS
GTTGCAGAAGGCAGTAGAAG+CGG 0.623663 4:-1885307 None:intergenic
ACTAAACGAACAGCTGGAGG+AGG 0.624134 4:+1889248 MsG0480018226.01.T01:CDS
GCAGATGAAGGCCAAGAAGT+GGG 0.625863 4:+1889408 MsG0480018226.01.T01:CDS
AGGTTCTAATGGTTCAAACA+AGG 0.637581 4:-1888746 None:intergenic
GCACTTGCAAGTGCAGCTTG+TGG 0.640595 4:+1889287 MsG0480018226.01.T01:CDS
CTGCAACACCATCATAAGGG+AGG 0.644870 4:+1885323 MsG0480018226.01.T01:CDS
ATGTGGTCGAAAGCATGCGA+AGG 0.652930 4:+1888890 MsG0480018226.01.T01:CDS
GATACAGCTAAAACACCACC+CGG 0.658820 4:+1888645 MsG0480018226.01.T01:CDS
TGGACTAAACGAACAGCTGG+AGG 0.659762 4:+1889245 MsG0480018226.01.T01:CDS
TTTGCAGACTCAAAATCAGG+TGG 0.663167 4:-1888817 None:intergenic
GAACCTATAAAGAACAGCAA+CGG 0.668853 4:+1888763 MsG0480018226.01.T01:CDS
TAGTAGTAGTATCAATATGG+GGG 0.676157 4:+1889554 MsG0480018226.01.T01:three_prime_UTR
TATCACCCTCTTGTAAGTCG+CGG 0.676833 4:-1884017 None:intergenic
GAGAAGGCCCGTAGACGCCG+TGG 0.683285 4:+1883053 MsG0480018226.01.T01:CDS
AAAGCTTGTCAATGTTGATG+TGG 0.687893 4:+1888873 MsG0480018226.01.T01:CDS
AAGAAGAGTAGATCAAATGG+CGG 0.724904 4:+1883077 MsG0480018226.01.T01:CDS
GTAGACCGCGACTTACAAGA+GGG 0.725543 4:+1884012 MsG0480018226.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAATATTAAAAAATA+AGG - Chr4:1880947-1880966 None:intergenic 0.0%
!! TAAAAAATAATTAAAAAAAT+TGG - Chr4:1880586-1880605 None:intergenic 0.0%
!! TTAAAAAAAATAAAATTAAA+TGG - Chr4:1880987-1881006 None:intergenic 0.0%
!!! AAAAAATTTAAAATAAAAAT+AGG - Chr4:1882907-1882926 None:intergenic 0.0%
!! AATAATTAAAAAAATTGGTT+AGG - Chr4:1880581-1880600 None:intergenic 10.0%
!! AATAGATAATAATATGAAAA+AGG - Chr4:1885541-1885560 None:intergenic 10.0%
!! AATTTACTTAATTTATTATC+GGG - Chr4:1882791-1882810 None:intergenic 10.0%
!! AGATTATTATTATTATTACT+TGG - Chr4:1886625-1886644 None:intergenic 10.0%
!! ATAATTAAAAAAATTGGTTA+GGG - Chr4:1880580-1880599 None:intergenic 10.0%
!! CATGTTAAAAATATAAAAAT+TGG - Chr4:1883029-1883048 None:intergenic 10.0%
!! GATTATTATTATTATTACTT+GGG - Chr4:1886624-1886643 None:intergenic 10.0%
!! GGAAAATATTTAAAAAAAAT+TGG - Chr4:1881310-1881329 None:intergenic 10.0%
!!! ATTGTTTTTCTTAAAAAAAT+TGG - Chr4:1880400-1880419 None:intergenic 10.0%
!!! CAAAAATAACAATTTTATTA+AGG - Chr4:1887787-1887806 None:intergenic 10.0%
!!! TTGTTTTTCTTAAAAAAATT+GGG - Chr4:1880399-1880418 None:intergenic 10.0%
!!! TTTTTAAAAAATTGCTTTAA+AGG - Chr4:1884815-1884834 None:intergenic 10.0%
!!! TTTTTTAATTCAATCTTATT+AGG + Chr4:1882922-1882941 MsG0480018226.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTGAAACAA+TGG - Chr4:1886373-1886392 None:intergenic 10.0%
!! AAAATTGAAACATTCATATA+TGG - Chr4:1888038-1888057 None:intergenic 15.0%
!! AAAATTTGTAAATACATTAG+TGG + Chr4:1886084-1886103 MsG0480018226.01.T01:intron 15.0%
!! ACTTTATACTTAATATCATT+AGG + Chr4:1884222-1884241 MsG0480018226.01.T01:intron 15.0%
!! AGAATTGAGATAAAAATATT+TGG - Chr4:1881164-1881183 None:intergenic 15.0%
!! AGATGTAAAATTGAATATAA+TGG - Chr4:1888092-1888111 None:intergenic 15.0%
!! ATAAAAATAGGTTATTATTG+AGG - Chr4:1882895-1882914 None:intergenic 15.0%
!! ATATTTAAAAAAAATTGGTG+AGG - Chr4:1881305-1881324 None:intergenic 15.0%
!! CATCGTATTAAAAAAAAAAA+AGG - Chr4:1886257-1886276 None:intergenic 15.0%
!! GAAAAACAGATAAAATTAAA+TGG - Chr4:1881038-1881057 None:intergenic 15.0%
!! GAATTGAGATAAAAATATTT+GGG - Chr4:1881163-1881182 None:intergenic 15.0%
!! TAAATTATAATTCATCTTCA+AGG - Chr4:1889453-1889472 None:intergenic 15.0%
!! TAATTAAAAAAATTGGTTAG+GGG - Chr4:1880579-1880598 None:intergenic 15.0%
!! TACTTAATTGATATTGTATT+CGG - Chr4:1881505-1881524 None:intergenic 15.0%
!! TACTTAATTGATATTGTATT+TGG - Chr4:1881505-1881524 None:intergenic 15.0%
!! TTACATGAAAATAATAGTAT+TGG - Chr4:1887571-1887590 None:intergenic 15.0%
!! TTATAAGAATTTGATATGTT+TGG + Chr4:1880283-1880302 MsG0480018226.01.T01:intron 15.0%
!! TTCAAAGAAACATATTTATT+TGG + Chr4:1884247-1884266 MsG0480018226.01.T01:intron 15.0%
!!! AATATAAAGTATTGTTTTGT+TGG - Chr4:1887740-1887759 None:intergenic 15.0%
!!! AGTGATAGTAAATTTTATAA+CGG - Chr4:1880249-1880268 None:intergenic 15.0%
!!! ATAATACATTTTTCATGTTT+TGG + Chr4:1882259-1882278 MsG0480018226.01.T01:intron 15.0%
!!! ATACGTTAGTATAATATTTT+TGG + Chr4:1887418-1887437 MsG0480018226.01.T01:intron 15.0%
!!! ATATTAGTCATAGATTTTAT+TGG - Chr4:1880445-1880464 None:intergenic 15.0%
!!! CTTTATTATTTTATCTTGTA+TGG + Chr4:1887084-1887103 MsG0480018226.01.T01:intron 15.0%
!!! TAAACTTTTTAAAGTAATGA+AGG - Chr4:1882315-1882334 None:intergenic 15.0%
!!! TTTATAGCAAAAAAGTTTTT+CGG + Chr4:1882331-1882350 MsG0480018226.01.T01:intron 15.0%
!!! TTTTAATGCATAAAATTGAA+TGG + Chr4:1881545-1881564 MsG0480018226.01.T01:intron 15.0%
!! AACCTCCTTAAAAAATTAAA+TGG - Chr4:1881015-1881034 None:intergenic 20.0%
!! AATCAAAAATGGAATTGTAA+AGG - Chr4:1883825-1883844 None:intergenic 20.0%
!! ACAACATTATAACAAGATAT+AGG + Chr4:1886285-1886304 MsG0480018226.01.T01:intron 20.0%
!! AGAACAAAAGTAAAACAAAA+TGG + Chr4:1885818-1885837 MsG0480018226.01.T01:intron 20.0%
!! ATATAGTAGTAGTATCAATA+TGG + Chr4:1889551-1889570 MsG0480018226.01.T01:three_prime_UTR 20.0%
!! ATATTGTAATCTTAAGAGAT+AGG + Chr4:1880204-1880223 MsG0480018226.01.T01:intron 20.0%
!! ATGCTATATGAAATCAAAAA+TGG - Chr4:1883836-1883855 None:intergenic 20.0%
!! ATTATTAGTGAACAAAATCT+AGG + Chr4:1885645-1885664 MsG0480018226.01.T01:intron 20.0%
!! CAATTTGGTAAATCAATTAT+TGG + Chr4:1880510-1880529 MsG0480018226.01.T01:intron 20.0%
!! CATGAAAAATGTATTATACT+TGG - Chr4:1882256-1882275 None:intergenic 20.0%
!! CCTTAAAAAATTAAATGGAA+TGG - Chr4:1881010-1881029 None:intergenic 20.0%
!! GTATGGTATTTATAGTATTT+AGG + Chr4:1887101-1887120 MsG0480018226.01.T01:intron 20.0%
!! TAAAAGATGAAGAAGAAAAA+AGG - Chr4:1886951-1886970 None:intergenic 20.0%
!! TAAATGAATTGCAAAAAGAA+TGG + Chr4:1888573-1888592 MsG0480018226.01.T01:intron 20.0%
!! TAAGTTTGATTACCAAAAAA+GGG - Chr4:1884508-1884527 None:intergenic 20.0%
!! TACTTAATTGATATTGTGTT+TGG - Chr4:1880780-1880799 None:intergenic 20.0%
!! TAGAGAAGTTGAAAAAAAAA+CGG - Chr4:1881461-1881480 None:intergenic 20.0%
!! TAGAGAAGTTTGAAAAAAAT+CGG - Chr4:1880736-1880755 None:intergenic 20.0%
!! TATAGTAGTAGTATCAATAT+GGG + Chr4:1889552-1889571 MsG0480018226.01.T01:three_prime_UTR 20.0%
!! TATTATACTAACGTATTGTT+TGG - Chr4:1887414-1887433 None:intergenic 20.0%
!! TATTATTATTATTACTTGGG+TGG - Chr4:1886621-1886640 None:intergenic 20.0%
!! TGCACATTTATAAACTAAAA+AGG - Chr4:1882422-1882441 None:intergenic 20.0%
!! TGGTTACACTTAAATTATTA+CGG + Chr4:1888402-1888421 MsG0480018226.01.T01:intron 20.0%
!! TTAAGTTTGATTACCAAAAA+AGG - Chr4:1884509-1884528 None:intergenic 20.0%
!! TTATTGTTCTAATCTTTATG+TGG - Chr4:1886562-1886581 None:intergenic 20.0%
!! TTGAATTTAAGGGTTTAAAA+AGG - Chr4:1888959-1888978 None:intergenic 20.0%
!! TTTACTATCTCTAAATAAGA+AGG + Chr4:1888291-1888310 MsG0480018226.01.T01:intron 20.0%
!!! AAAGTTTATGTTTTAGTTTC+CGG + Chr4:1885709-1885728 MsG0480018226.01.T01:intron 20.0%
!!! AATTGTTATTTTTGTGATCA+TGG + Chr4:1887793-1887812 MsG0480018226.01.T01:intron 20.0%
!!! AGTTTATTTTTTTTGAAGGT+TGG + Chr4:1880533-1880552 MsG0480018226.01.T01:intron 20.0%
!!! ATAATTTTTTTAGTGTTGCT+TGG + Chr4:1881269-1881288 MsG0480018226.01.T01:intron 20.0%
!!! ATTCTTAGCTTTGAATTTAA+GGG - Chr4:1888969-1888988 None:intergenic 20.0%
!!! ATTTGTATGATTTGAAATTG+AGG + Chr4:1887219-1887238 MsG0480018226.01.T01:intron 20.0%
!!! ATTTTACATCTTCTTTTTCA+AGG + Chr4:1888101-1888120 MsG0480018226.01.T01:intron 20.0%
!!! CAAGATATAATGATTTTCAA+CGG - Chr4:1886651-1886670 None:intergenic 20.0%
!!! CCATTCCATTTAATTTTTTA+AGG + Chr4:1881007-1881026 MsG0480018226.01.T01:intron 20.0%
!!! CTTTTTTCAGATAATTTTGT+TGG - Chr4:1884916-1884935 None:intergenic 20.0%
!!! GGTGATTTTTTAATTGAATT+TGG + Chr4:1887144-1887163 MsG0480018226.01.T01:intron 20.0%
!!! GTATATATTAATGGTTTGTT+AGG - Chr4:1881822-1881841 None:intergenic 20.0%
!!! TCACTCATATTTTAATCTTT+TGG + Chr4:1881679-1881698 MsG0480018226.01.T01:CDS 20.0%
!!! TGAGATATTTTTCTGATATA+CGG + Chr4:1885481-1885500 MsG0480018226.01.T01:intron 20.0%
!!! TTCCATTTAATTTTTTAAGG+AGG + Chr4:1881010-1881029 MsG0480018226.01.T01:intron 20.0%
!!! TTGGAGTTTATTTTTTTTGA+AGG + Chr4:1880529-1880548 MsG0480018226.01.T01:intron 20.0%
!!! TTTGGTAATCAAACTTAAAT+AGG + Chr4:1884511-1884530 MsG0480018226.01.T01:intron 20.0%
!!! TTTGTTTTTGAAAGAAAATG+TGG - Chr4:1886404-1886423 None:intergenic 20.0%
!!! TTTTTCAAGGAAACTTAAAT+GGG + Chr4:1888114-1888133 MsG0480018226.01.T01:intron 20.0%
! AAAAACAAAAAACTGTTACC+CGG + Chr4:1886415-1886434 MsG0480018226.01.T01:intron 25.0%
! AAACAGGAAAAAAAAGTTTG+AGG + Chr4:1883661-1883680 MsG0480018226.01.T01:intron 25.0%
! AAATCATGATTCATTCAAGT+TGG + Chr4:1884192-1884211 MsG0480018226.01.T01:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG + Chr4:1883149-1883168 MsG0480018226.01.T01:CDS 25.0%
! AATGTAGAAGCAATTGAATT+TGG - Chr4:1883308-1883327 None:intergenic 25.0%
! AATTAAAGGATTAAAGAGAG+AGG - Chr4:1886061-1886080 None:intergenic 25.0%
! ACTTAATTTATTATCGGGTA+TGG - Chr4:1882786-1882805 None:intergenic 25.0%
! AGAGAAGTTGAAAAAAAAAC+GGG - Chr4:1881460-1881479 None:intergenic 25.0%
! AGAGAAGTTTGAAAAAAATC+GGG - Chr4:1880735-1880754 None:intergenic 25.0%
! ATACTAAACATTTAGAAGTC+AGG - Chr4:1880331-1880350 None:intergenic 25.0%
! ATAGAACATTTACATGAGAT+TGG - Chr4:1881628-1881647 None:intergenic 25.0%
! ATAGTAGTAGTATCAATATG+GGG + Chr4:1889553-1889572 MsG0480018226.01.T01:three_prime_UTR 25.0%
! ATATGGTAGATGAACAATAA+AGG - Chr4:1888021-1888040 None:intergenic 25.0%
! ATCATTATATCTACTAATGC+GGG - Chr4:1882399-1882418 None:intergenic 25.0%
! ATGTAGAAGCAATTGAATTT+GGG - Chr4:1883307-1883326 None:intergenic 25.0%
! ATTGAATTTCTTGATGTACA+AGG + Chr4:1887829-1887848 MsG0480018226.01.T01:intron 25.0%
! CAAGTGGATAAAAAATAAAC+TGG - Chr4:1889084-1889103 None:intergenic 25.0%
! CAATAAACAACAAAATGTAG+TGG + Chr4:1884099-1884118 MsG0480018226.01.T01:intron 25.0%
! CACATGGTATTATTCTTATA+AGG - Chr4:1882201-1882220 None:intergenic 25.0%
! CGTTTGTGTTTAATATTGAA+AGG - Chr4:1880020-1880039 None:intergenic 25.0%
! CTGATAAATGTGATTATCAT+GGG - Chr4:1886685-1886704 None:intergenic 25.0%
! CTTAATTTATTATCGGGTAT+GGG - Chr4:1882785-1882804 None:intergenic 25.0%
! CTTATAAGAATAATACCATG+TGG + Chr4:1882199-1882218 MsG0480018226.01.T01:intron 25.0%
! GATCATTATATCTACTAATG+CGG - Chr4:1882400-1882419 None:intergenic 25.0%
! GTGAAAAACAAAGCAAAAAT+TGG - Chr4:1885436-1885455 None:intergenic 25.0%
! GTGTATGTAACTTTACTAAA+CGG + Chr4:1885077-1885096 MsG0480018226.01.T01:intron 25.0%
! GTTCGATCTATTCAAATTTA+TGG + Chr4:1885579-1885598 MsG0480018226.01.T01:intron 25.0%
! TAACAAAAAAAAGAGACAGA+CGG - Chr4:1881238-1881257 None:intergenic 25.0%
! TAGAGAAGTTTGAAAAAAGT+CGG - Chr4:1883362-1883381 None:intergenic 25.0%
! TCATAATACATCTACAATTG+AGG + Chr4:1885006-1885025 MsG0480018226.01.T01:intron 25.0%
! TCATTATATCTTGATCGTAA+CGG + Chr4:1886658-1886677 MsG0480018226.01.T01:intron 25.0%
! TCGTAATGAGAAAAAAATGT+TGG + Chr4:1880055-1880074 MsG0480018226.01.T01:intron 25.0%
! TGAAATAACTAACATTGTAG+TGG - Chr4:1884161-1884180 None:intergenic 25.0%
! TGACGTAGAACAATATTAAT+AGG + Chr4:1883751-1883770 MsG0480018226.01.T01:intron 25.0%
! TGCTTATGCTAAAAATGATT+TGG + Chr4:1884378-1884397 MsG0480018226.01.T01:intron 25.0%
! TGTTTCATAGATCTTGATAT+TGG + Chr4:1885456-1885475 MsG0480018226.01.T01:intron 25.0%
! TTAAAAAAACAACAAAGACC+AGG + Chr4:1886519-1886538 MsG0480018226.01.T01:intron 25.0%
! TTACAACTATAATCTTCAAG+TGG + Chr4:1883601-1883620 MsG0480018226.01.T01:intron 25.0%
! TTCACAGCAGTATATATTAA+TGG - Chr4:1881831-1881850 None:intergenic 25.0%
! TTGAAAGAAACATGTTTCTT+TGG + Chr4:1884285-1884304 MsG0480018226.01.T01:intron 25.0%
! TTGAATTTCTTGATGTACAA+GGG + Chr4:1887830-1887849 MsG0480018226.01.T01:intron 25.0%
! TTTGAACGCATAAAATTGAA+TGG + Chr4:1880821-1880840 MsG0480018226.01.T01:intron 25.0%
! TTTGATTGTATCTATAACCA+CGG + Chr4:1882756-1882775 MsG0480018226.01.T01:intron 25.0%
!! ACTCTTTTGGATATTTGATT+TGG - Chr4:1883862-1883881 None:intergenic 25.0%
!! ATGAAGGAAATTTGTTCTAA+AGG - Chr4:1882299-1882318 None:intergenic 25.0%
!! ATTGAACATGTTTTCAATCT+AGG - Chr4:1887527-1887546 None:intergenic 25.0%
!! ATTTCATTTCTTGCATGTTT+TGG + Chr4:1886815-1886834 MsG0480018226.01.T01:intron 25.0%
!! ATTTTTAACATGTAGAGAGA+AGG + Chr4:1883037-1883056 MsG0480018226.01.T01:intron 25.0%
!! CAAACTTCTCTACATTTTTA+AGG + Chr4:1880744-1880763 MsG0480018226.01.T01:intron 25.0%
!! CGGTAAAATTTTCTTCAATA+AGG - Chr4:1882859-1882878 None:intergenic 25.0%
!! GGTTATTATTGAGGATTTTT+AGG - Chr4:1882886-1882905 None:intergenic 25.0%
!! GTTTCTCTAATAGTTTTCTT+AGG - Chr4:1883132-1883151 None:intergenic 25.0%
!! TACACTCATTTTCTAAATTG+TGG - Chr4:1885062-1885081 None:intergenic 25.0%
!! TCAACTTCTCTACATTTTTA+AGG + Chr4:1881469-1881488 MsG0480018226.01.T01:intron 25.0%
!! TTATGAATTGCTGGATTTTT+AGG + Chr4:1885932-1885951 MsG0480018226.01.T01:intron 25.0%
!!! ACTCCTTTAGAAACAAATTT+TGG + Chr4:1884700-1884719 MsG0480018226.01.T01:intron 25.0%
!!! AGAAAATTTTGAAGCAACTA+TGG + Chr4:1886847-1886866 MsG0480018226.01.T01:intron 25.0%
!!! AGTTGTCATCCTTTTTTTTT+AGG + Chr4:1886139-1886158 MsG0480018226.01.T01:intron 25.0%
!!! ATAATAATCCAACCCTTTTT+TGG + Chr4:1884493-1884512 MsG0480018226.01.T01:intron 25.0%
!!! ATCTTTTGGAAATTGTATTC+TGG + Chr4:1881693-1881712 MsG0480018226.01.T01:CDS 25.0%
!!! ATTATTGAGGATTTTTAGGT+GGG - Chr4:1882882-1882901 None:intergenic 25.0%
!!! ATTTATTTGGTGTCATCATT+AGG + Chr4:1884260-1884279 MsG0480018226.01.T01:intron 25.0%
!!! ATTTTCCTTCTTATTTTCTG+CGG + Chr4:1888241-1888260 MsG0480018226.01.T01:intron 25.0%
!!! CACTACATTTTGTTGTTTAT+TGG - Chr4:1884101-1884120 None:intergenic 25.0%
!!! CATTCTTAGCTTTGAATTTA+AGG - Chr4:1888970-1888989 None:intergenic 25.0%
!!! CTTCCAAAATTTGTTTCTAA+AGG - Chr4:1884706-1884725 None:intergenic 25.0%
!!! CTTTTTCAAGGAAACTTAAA+TGG + Chr4:1888113-1888132 MsG0480018226.01.T01:intron 25.0%
!!! GCTTTATTTGTTATTATGGT+TGG + Chr4:1887384-1887403 MsG0480018226.01.T01:intron 25.0%
!!! GTGTTTAATTGAGCTTTTTT+TGG + Chr4:1887123-1887142 MsG0480018226.01.T01:intron 25.0%
!!! GTTGTCATCCTTTTTTTTTA+GGG + Chr4:1886140-1886159 MsG0480018226.01.T01:intron 25.0%
!!! TAACATTTTGTTTTGTAAGC+TGG + Chr4:1887259-1887278 MsG0480018226.01.T01:intron 25.0%
!!! TACATTTTTAAGGAGAAGTT+AGG + Chr4:1880754-1880773 MsG0480018226.01.T01:intron 25.0%
!!! TATTATTGAGGATTTTTAGG+TGG - Chr4:1882883-1882902 None:intergenic 25.0%
!!! TCTTGAAAAGAAAGTATCTA+AGG + Chr4:1883881-1883900 MsG0480018226.01.T01:CDS 25.0%
!!! TTTCGTAAGCTTATTTTCTT+TGG + Chr4:1882017-1882036 MsG0480018226.01.T01:intron 25.0%
!!! TTTGACTACCCATTTTTATA+TGG + Chr4:1882720-1882739 MsG0480018226.01.T01:intron 25.0%
AAATAAGAAGGAAGAAAACC+TGG + Chr4:1888303-1888322 MsG0480018226.01.T01:intron 30.0%
AAATTGAATGGAATGTGCTT+TGG + Chr4:1881557-1881576 MsG0480018226.01.T01:intron 30.0%
AAGAATAATACCATGTGGAT+TGG + Chr4:1882204-1882223 MsG0480018226.01.T01:intron 30.0%
AAGGGTTTAAAAAGGAAACT+TGG - Chr4:1888951-1888970 None:intergenic 30.0%
AAGTAACATTCAACAACTTC+TGG - Chr4:1880859-1880878 None:intergenic 30.0%
AATGCTGAGAAAAATTTAGG+TGG + Chr4:1883970-1883989 MsG0480018226.01.T01:CDS 30.0%
AATGTAGAAGCAACTGAATT+TGG - Chr4:1880682-1880701 None:intergenic 30.0%
AATTGCTATCATACTAAGGA+AGG + Chr4:1882227-1882246 MsG0480018226.01.T01:intron 30.0%
AATTTAAGCACGATTAACTC+CGG - Chr4:1887657-1887676 None:intergenic 30.0%
ACACAAGACATATAATTGCA+AGG + Chr4:1883927-1883946 MsG0480018226.01.T01:CDS 30.0%
ACATACTCATTCATATGACA+TGG + Chr4:1882134-1882153 MsG0480018226.01.T01:intron 30.0%
AGAAAAATTTAGGTGGTGAA+TGG + Chr4:1883977-1883996 MsG0480018226.01.T01:CDS 30.0%
AGACATATAATTGCAAGGTT+AGG + Chr4:1883932-1883951 MsG0480018226.01.T01:CDS 30.0%
AGAGAAGTTTGAAAAAAGTC+GGG - Chr4:1883361-1883380 None:intergenic 30.0%
AGGTGGGAAAAAATTAAAGA+AGG + Chr4:1886011-1886030 MsG0480018226.01.T01:intron 30.0%
ATAGTATTCTAAATGCTCAC+AGG + Chr4:1882625-1882644 MsG0480018226.01.T01:intron 30.0%
ATATACTGCTGTGAATTCTA+AGG + Chr4:1881836-1881855 MsG0480018226.01.T01:CDS 30.0%
ATCAACTAAGAACCTCTTAT+GGG - Chr4:1885683-1885702 None:intergenic 30.0%
ATGTAGAAGCAACTGAATTT+GGG - Chr4:1880681-1880700 None:intergenic 30.0%
ATTAAGAAGTCACATATGCA+AGG - Chr4:1887983-1888002 None:intergenic 30.0%
ATTGTTGTCCTTCTCAAATA+TGG - Chr4:1884661-1884680 None:intergenic 30.0%
CACTATATGTGCAATAACAA+TGG + Chr4:1884574-1884593 MsG0480018226.01.T01:intron 30.0%
CATAATCCCAAAAAGTAGAT+TGG - Chr4:1885917-1885936 None:intergenic 30.0%
CGATCTATTCAAATTTATGG+AGG + Chr4:1885582-1885601 MsG0480018226.01.T01:intron 30.0%
CTAATGCATTAATGCTGTTA+TGG - Chr4:1887620-1887639 None:intergenic 30.0%
CTATGATAATTGCAGATGAT+TGG + Chr4:1880167-1880186 MsG0480018226.01.T01:intron 30.0%
CTGTGTATCCCTAAAAAAAA+AGG - Chr4:1886151-1886170 None:intergenic 30.0%
CTTCATTTCCATATTTGAGA+AGG + Chr4:1884650-1884669 MsG0480018226.01.T01:intron 30.0%
GAAGAAATGGATAAATGATG+AGG + Chr4:1881968-1881987 MsG0480018226.01.T01:CDS 30.0%
GAATTTGATATGTTTGGATG+AGG + Chr4:1880289-1880308 MsG0480018226.01.T01:intron 30.0%
GAATTTGGGAGGAAAAAAAT+TGG - Chr4:1881392-1881411 None:intergenic 30.0%
GCTGATAAATGTGATTATCA+TGG - Chr4:1886686-1886705 None:intergenic 30.0%
GTCTGTGTCCATATAAAAAT+GGG - Chr4:1882731-1882750 None:intergenic 30.0%
GTGGATAAAAAATAAACTGG+TGG - Chr4:1889081-1889100 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG - Chr4:1883189-1883208 None:intergenic 30.0%
GTTGATATTGTGGATAATTG+CGG - Chr4:1885040-1885059 None:intergenic 30.0%
TAAAACCAAAAAGAGTTGCA+AGG + Chr4:1886763-1886782 MsG0480018226.01.T01:intron 30.0%
TAACCTTTCTGTTCATTTCT+TGG - Chr4:1888924-1888943 None:intergenic 30.0%
TAAGCTTCTTCAAAAAAGAG+TGG + Chr4:1883628-1883647 MsG0480018226.01.T01:intron 30.0%
TAGTAGTAGTATCAATATGG+GGG + Chr4:1889554-1889573 MsG0480018226.01.T01:three_prime_UTR 30.0%
TATCAACTAAGAACCTCTTA+TGG - Chr4:1885684-1885703 None:intergenic 30.0%
TATCTGTTCAAACGATAGTT+TGG + Chr4:1884468-1884487 MsG0480018226.01.T01:intron 30.0%
TCATCTGCAATTATCATAGA+TGG - Chr4:1880166-1880185 None:intergenic 30.0%
TCTTTGATAGAACATTATGG+CGG + Chr4:1883196-1883215 MsG0480018226.01.T01:intron 30.0%
TGAAAAAAAAACGGGTCAAA+CGG - Chr4:1881452-1881471 None:intergenic 30.0%
TGAATTTCTTGATGTACAAG+GGG + Chr4:1887831-1887850 MsG0480018226.01.T01:intron 30.0%
TGGTCTTTGATAGAACATTA+TGG + Chr4:1883193-1883212 MsG0480018226.01.T01:intron 30.0%
TGTAAGGTTGTTGAAAACTT+TGG + Chr4:1886715-1886734 MsG0480018226.01.T01:intron 30.0%
TGTCTGTGTCCATATAAAAA+TGG - Chr4:1882732-1882751 None:intergenic 30.0%
TTATTGCACATATAGTGTAC+TGG - Chr4:1884571-1884590 None:intergenic 30.0%
TTGGAATTGCTATCATACTA+AGG + Chr4:1882223-1882242 MsG0480018226.01.T01:intron 30.0%
TTTGATTACCAAAAAAGGGT+TGG - Chr4:1884504-1884523 None:intergenic 30.0%
! AAGTAGCATTCAACAACTTT+TGG - Chr4:1881583-1881602 None:intergenic 30.0%
! AATATTTTATGAGCACGTGA+TGG - Chr4:1886466-1886485 None:intergenic 30.0%
! ATAGTATTGGACTATTGTGT+TGG - Chr4:1887558-1887577 None:intergenic 30.0%
! ATATTTTATGAGCACGTGAT+GGG - Chr4:1886465-1886484 None:intergenic 30.0%
! ATTTTCCTTGCAACTCTTTT+TGG - Chr4:1886771-1886790 None:intergenic 30.0%
! CTAAATTGTGGTTGATATTG+TGG - Chr4:1885050-1885069 None:intergenic 30.0%
! CTGTTCTTTATAGGTTCTAA+TGG - Chr4:1888760-1888779 None:intergenic 30.0%
! CTTGTTATGTGTTGAGTTAT+GGG + Chr4:1887896-1887915 MsG0480018226.01.T01:intron 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - Chr4:1883154-1883173 None:intergenic 30.0%
! GAGTTGAATTTGAAGTTGAA+GGG + Chr4:1885974-1885993 MsG0480018226.01.T01:intron 30.0%
! GTTTTATGATGTGAATGAAG+TGG - Chr4:1882958-1882977 None:intergenic 30.0%
! TATCAGCATCTTTGTTTGTA+AGG + Chr4:1886699-1886718 MsG0480018226.01.T01:intron 30.0%
! TCGTATATTGGTTGAAATTC+AGG - Chr4:1889121-1889140 None:intergenic 30.0%
! TCTTGTTATGTGTTGAGTTA+TGG + Chr4:1887895-1887914 MsG0480018226.01.T01:intron 30.0%
! TGAGTTGAATTTGAAGTTGA+AGG + Chr4:1885973-1885992 MsG0480018226.01.T01:intron 30.0%
! TGTTAGTGTTATTACGAAGT+TGG - Chr4:1881773-1881792 None:intergenic 30.0%
! TGTTGGTTACTTTCATAAAG+AGG - Chr4:1887723-1887742 None:intergenic 30.0%
! TTGGCAATCACATTTGTTAA+CGG - Chr4:1884897-1884916 None:intergenic 30.0%
!! AAACATGTTTCTTTGGTGTT+AGG + Chr4:1884292-1884311 MsG0480018226.01.T01:intron 30.0%
!! AAGGAGTATTGTTGAAATCA+TGG - Chr4:1884687-1884706 None:intergenic 30.0%
!! AGCTTATTTTCTTTGGAAGA+AGG + Chr4:1882024-1882043 MsG0480018226.01.T01:intron 30.0%
!! ATTTGAATCTCTGAGACTTT+AGG - Chr4:1881897-1881916 None:intergenic 30.0%
!! CGCTGCTTTATTTGTTATTA+TGG + Chr4:1887380-1887399 MsG0480018226.01.T01:intron 30.0%
!! CTTACTTTTCTCAAAAACAG+AGG + Chr4:1889594-1889613 MsG0480018226.01.T01:three_prime_UTR 30.0%
!! CTTTCTTTTCAAGACTCTTT+TGG - Chr4:1883875-1883894 None:intergenic 30.0%
!! GAAAAAGTATCAATCCACAA+AGG - Chr4:1882060-1882079 None:intergenic 30.0%
!! TAGCAAAAAAGTTTTTCGGT+TGG + Chr4:1882335-1882354 MsG0480018226.01.T01:intron 30.0%
!! TGATAGGTTGATCTTTGATT+TGG + Chr4:1884035-1884054 MsG0480018226.01.T01:CDS 30.0%
!!! ATTGATACTTTTTCACAGAG+GGG + Chr4:1882066-1882085 MsG0480018226.01.T01:intron 30.0%
!!! CAACACTTTTTCTCGTATAT+TGG - Chr4:1889133-1889152 None:intergenic 30.0%
!!! GATTGATACTTTTTCACAGA+GGG + Chr4:1882065-1882084 MsG0480018226.01.T01:intron 30.0%
!!! TTCTCTTGTGTTTTTTTGCA+AGG - Chr4:1885762-1885781 None:intergenic 30.0%
!!! TTTAGTTTTACATTGCAACC+CGG + Chr4:1880137-1880156 MsG0480018226.01.T01:intron 30.0%
!!! TTTTTGGGATTATGAATTGC+TGG + Chr4:1885923-1885942 MsG0480018226.01.T01:intron 30.0%
AAAAACAACAAAGACCAGGA+AGG + Chr4:1886523-1886542 MsG0480018226.01.T01:intron 35.0%
AAAGCTTGTCAATGTTGATG+TGG + Chr4:1888873-1888892 MsG0480018226.01.T01:CDS 35.0%
AAATTGGTTAGGGGCAAAAA+TGG - Chr4:1880570-1880589 None:intergenic 35.0%
AACAGAAGTTATGAATCGCA+CGG - Chr4:1884853-1884872 None:intergenic 35.0%
AACTCTTCAAAAGTGGTGAT+AGG + Chr4:1881993-1882012 MsG0480018226.01.T01:CDS 35.0%
AAGAAGAGTAGATCAAATGG+CGG + Chr4:1883077-1883096 MsG0480018226.01.T01:CDS 35.0%
AAGTAACATTCAACAGCTTC+TGG - Chr4:1883484-1883503 None:intergenic 35.0%
AATGGGAGATGAATCACTAA+AGG + Chr4:1888131-1888150 MsG0480018226.01.T01:intron 35.0%
AATGTGTGTATACATTCGTG+AGG - Chr4:1881191-1881210 None:intergenic 35.0%
ACAAAAGAGCCTTAACAGAA+GGG + Chr4:1886222-1886241 MsG0480018226.01.T01:intron 35.0%
ACCACATAAACGCAAAAGAA+AGG + Chr4:1885784-1885803 MsG0480018226.01.T01:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG + Chr4:1883161-1883180 MsG0480018226.01.T01:CDS 35.0%
AGTGTAGAAGCAACTGAATT+TGG - Chr4:1881407-1881426 None:intergenic 35.0%
ATTAGATCTCATCAGAACTC+CGG + Chr4:1887635-1887654 MsG0480018226.01.T01:intron 35.0%
ATTATATCTACTAATGCGGG+TGG - Chr4:1882396-1882415 None:intergenic 35.0%
ATTCCTGTTGCAATAAAGAG+AGG - Chr4:1884351-1884370 None:intergenic 35.0%
CAACACAAAAACTTTCTAGG+AGG - Chr4:1887681-1887700 None:intergenic 35.0%
CTAGATTTCCAGAAAATCTG+AGG - Chr4:1886914-1886933 None:intergenic 35.0%
CTTCGTAAATTTGAGAACGA+AGG - Chr4:1884761-1884780 None:intergenic 35.0%
GAACCTATAAAGAACAGCAA+CGG + Chr4:1888763-1888782 MsG0480018226.01.T01:CDS 35.0%
GAATTTCTTGATGTACAAGG+GGG + Chr4:1887832-1887851 MsG0480018226.01.T01:intron 35.0%
GCACAAACAATTCAGATTGA+AGG + Chr4:1888342-1888361 MsG0480018226.01.T01:intron 35.0%
GGGAATGCTGAGAAAAATTT+AGG + Chr4:1883967-1883986 MsG0480018226.01.T01:CDS 35.0%
GGGCAAAATGGTAAATTCAT+AGG - Chr4:1880480-1880499 None:intergenic 35.0%
GGGGTTCATATGAACTTATT+TGG + Chr4:1882085-1882104 MsG0480018226.01.T01:intron 35.0%
GGTAAGAAGAGTAGATCAAA+TGG + Chr4:1883074-1883093 MsG0480018226.01.T01:CDS 35.0%
GTACAATAGTGGTTAACAGT+TGG + Chr4:1887341-1887360 MsG0480018226.01.T01:intron 35.0%
GTATCCACGGGTATAATAAA+CGG + Chr4:1882696-1882715 MsG0480018226.01.T01:intron 35.0%
GTGCAACACAAAAACTTTCT+AGG - Chr4:1887684-1887703 None:intergenic 35.0%
GTGTAGAAGCAACTGAATTT+GGG - Chr4:1881406-1881425 None:intergenic 35.0%
GTTAAGGTTAAAGCTTCTTC+TGG + Chr4:1885282-1885301 MsG0480018226.01.T01:CDS 35.0%
GTTACAAGAAACTGAGCAAA+TGG + Chr4:1889386-1889405 MsG0480018226.01.T01:CDS 35.0%
GTTGAAGGGATGAATTTAAG+AGG + Chr4:1885988-1886007 MsG0480018226.01.T01:intron 35.0%
TACAAAAGAGCCTTAACAGA+AGG + Chr4:1886221-1886240 MsG0480018226.01.T01:intron 35.0%
TAGAAGCAATTGAATTTGGG+AGG - Chr4:1883304-1883323 None:intergenic 35.0%
TATCACCGCAGAAAATAAGA+AGG - Chr4:1888249-1888268 None:intergenic 35.0%
TATCCACGGGTATAATAAAC+GGG + Chr4:1882697-1882716 MsG0480018226.01.T01:intron 35.0%
TCAATCAGTACAGATAGCAA+TGG + Chr4:1885172-1885191 MsG0480018226.01.T01:intron 35.0%
TGAAAAAGGAAAAGAAGCCA+TGG - Chr4:1885527-1885546 None:intergenic 35.0%
TGATGTGAATGAAGTGGAAA+CGG - Chr4:1882952-1882971 None:intergenic 35.0%
TGGAAATCTAGAAAGAGATC+AGG + Chr4:1886923-1886942 MsG0480018226.01.T01:intron 35.0%
TGTCCAAGAAATGAACAGAA+AGG + Chr4:1888918-1888937 MsG0480018226.01.T01:CDS 35.0%
TTATATCTACTAATGCGGGT+GGG - Chr4:1882395-1882414 None:intergenic 35.0%
TTATCCATTTCTTCCTGTTG+TGG - Chr4:1881962-1881981 None:intergenic 35.0%
TTCATCTTCAAGGTTCATCT+TGG - Chr4:1889443-1889462 None:intergenic 35.0%
TTGATCTACTCTTCTTACCA+CGG - Chr4:1883073-1883092 None:intergenic 35.0%
TTGCAGGATAGAGAAATAGA+TGG + Chr4:1889225-1889244 MsG0480018226.01.T01:intron 35.0%
! AAAAAGTTTGAGGTCTGTTG+TGG + Chr4:1883671-1883690 MsG0480018226.01.T01:intron 35.0%
! AAAAATGATTTGGATCTCGC+TGG + Chr4:1884388-1884407 MsG0480018226.01.T01:intron 35.0%
! AAAATGATTTGGATCTCGCT+GGG + Chr4:1884389-1884408 MsG0480018226.01.T01:intron 35.0%
! AAGGATGACTTTAGAAGATG+TGG + Chr4:1883900-1883919 MsG0480018226.01.T01:CDS 35.0%
! AGGTTCTAATGGTTCAAACA+AGG - Chr4:1888749-1888768 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG + Chr4:1883173-1883192 MsG0480018226.01.T01:CDS 35.0%
! GATGTGTCTGACAAACATTT+TGG - Chr4:1884073-1884092 None:intergenic 35.0%
! GCGATTCATAACTTCTGTTT+TGG + Chr4:1884854-1884873 MsG0480018226.01.T01:intron 35.0%
! TACTTCATATGTGTTGTTCC+TGG + Chr4:1885232-1885251 MsG0480018226.01.T01:intron 35.0%
! TAGTTTGCAGACTCAAAATC+AGG - Chr4:1888823-1888842 None:intergenic 35.0%
! TATTTTTCTGATATACGGCC+AGG + Chr4:1885486-1885505 MsG0480018226.01.T01:intron 35.0%
! TCCTTTCTTTTGCGTTTATG+TGG - Chr4:1885788-1885807 None:intergenic 35.0%
! TGGCAATCACATTTGTTAAC+GGG - Chr4:1884896-1884915 None:intergenic 35.0%
!! AGGGATTCCAATCTACTTTT+TGG + Chr4:1885907-1885926 MsG0480018226.01.T01:intron 35.0%
!! CATGATTCATTCAAGTTGGT+AGG + Chr4:1884196-1884215 MsG0480018226.01.T01:intron 35.0%
!! CGAGAAAAAGTGTTGAAAAG+AGG + Chr4:1889138-1889157 MsG0480018226.01.T01:intron 35.0%
!! TAGGTTGATCTTTGATTTGG+AGG + Chr4:1884038-1884057 MsG0480018226.01.T01:CDS 35.0%
!! TGTCTGACAAACATTTTGGT+CGG - Chr4:1884069-1884088 None:intergenic 35.0%
!! TGTGAATTCTAAGGTGAATC+AGG + Chr4:1881845-1881864 MsG0480018226.01.T01:CDS 35.0%
!!! AACATGTTCCTGCTTTTTTG+AGG - Chr4:1885213-1885232 None:intergenic 35.0%
!!! ACATGTTCCTGCTTTTTTGA+GGG - Chr4:1885212-1885231 None:intergenic 35.0%
!!! ATTTTGTTGTTTATTGGCCG+CGG - Chr4:1884095-1884114 None:intergenic 35.0%
!!! GGATTGATACTTTTTCACAG+AGG + Chr4:1882064-1882083 MsG0480018226.01.T01:intron 35.0%
!!! GGGATTCCAATCTACTTTTT+GGG + Chr4:1885908-1885927 MsG0480018226.01.T01:intron 35.0%
!!! TGGTTTTGATTACAGTGCAT+GGG + Chr4:1879929-1879948 MsG0480018226.01.T01:CDS 35.0%
!!! TTGGTTTTGATTACAGTGCA+TGG + Chr4:1879928-1879947 MsG0480018226.01.T01:CDS 35.0%
!!! TTTTGAAGCAACTATGGTCA+TGG + Chr4:1886853-1886872 MsG0480018226.01.T01:intron 35.0%
AAAATCTGAGGAGGTGAAAC+AGG - Chr4:1886902-1886921 None:intergenic 40.0%
AAACCCGTTTATTATACCCG+TGG - Chr4:1882703-1882722 None:intergenic 40.0%
AATTATCATAGATGGCGACC+GGG - Chr4:1880158-1880177 None:intergenic 40.0%
ACAGAAGTTATGAATCGCAC+GGG - Chr4:1884852-1884871 None:intergenic 40.0%
ACAGGGGTGAACAATATGAA+AGG + Chr4:1885887-1885906 MsG0480018226.01.T01:intron 40.0%
ACTCAAGTTAGACCCATAAG+AGG + Chr4:1885668-1885687 MsG0480018226.01.T01:intron 40.0%
AGAAGTGATCCCTTCTGTTA+AGG - Chr4:1886234-1886253 None:intergenic 40.0%
AGACTGTTAGAGTCTGCAAT+TGG - Chr4:1889017-1889036 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + Chr4:1883102-1883121 MsG0480018226.01.T01:CDS 40.0%
ATCTTTATGTGGTCCCCATT+TGG - Chr4:1886551-1886570 None:intergenic 40.0%
ATGCTTCATAGATAGATCCC+TGG + Chr4:1888461-1888480 MsG0480018226.01.T01:intron 40.0%
CAATCCACAACAGGAAGAAA+TGG + Chr4:1881955-1881974 MsG0480018226.01.T01:CDS 40.0%
CAATTATCATAGATGGCGAC+CGG - Chr4:1880159-1880178 None:intergenic 40.0%
CAGGGGTGAACAATATGAAA+GGG + Chr4:1885888-1885907 MsG0480018226.01.T01:intron 40.0%
CATATGACATGGTAGTCATG+TGG + Chr4:1882145-1882164 MsG0480018226.01.T01:intron 40.0%
CATATGCAAGGAAACCAACA+TGG - Chr4:1887971-1887990 None:intergenic 40.0%
CCATTACGTGTTTCTTGAAC+CGG - Chr4:1885731-1885750 None:intergenic 40.0%
CTTCTGCAACACCATCATAA+GGG + Chr4:1885320-1885339 MsG0480018226.01.T01:CDS 40.0%
GAAGGGATGAATTTAAGAGG+AGG + Chr4:1885991-1886010 MsG0480018226.01.T01:intron 40.0%
GAGTCTGCAAACTATCCAAA+GGG + Chr4:1888829-1888848 MsG0480018226.01.T01:CDS 40.0%
GAGTGGAAGATTAAGCAAAC+AGG + Chr4:1883645-1883664 MsG0480018226.01.T01:intron 40.0%
GATACCTTAATCTCCCACAA+CGG - Chr4:1880706-1880725 None:intergenic 40.0%
GATAGCAATTCCAATCCACA+TGG - Chr4:1882217-1882236 None:intergenic 40.0%
GATTTCCAGAAAATCTGAGG+AGG - Chr4:1886911-1886930 None:intergenic 40.0%
GGAGTCTTACTAAAGTCAAG+TGG - Chr4:1889100-1889119 None:intergenic 40.0%
GGATGAATTTAAGAGGAGGT+GGG + Chr4:1885995-1886014 MsG0480018226.01.T01:intron 40.0%
GGTAGCTAAATGAGTATCCA+CGG + Chr4:1882683-1882702 MsG0480018226.01.T01:intron 40.0%
GTAGCTAAATGAGTATCCAC+GGG + Chr4:1882684-1882703 MsG0480018226.01.T01:intron 40.0%
GTGGATGAAGCTTTCTGTTA+AGG + Chr4:1885266-1885285 MsG0480018226.01.T01:CDS 40.0%
TAAAAACCCATGTGGCTGTT+TGG + Chr4:1887857-1887876 MsG0480018226.01.T01:intron 40.0%
TAGAAGCAACTGAATTTGGG+AGG - Chr4:1880678-1880697 None:intergenic 40.0%
TATATCTACTAATGCGGGTG+GGG - Chr4:1882394-1882413 None:intergenic 40.0%
TATGGTCATGGATGATGCTT+TGG + Chr4:1886865-1886884 MsG0480018226.01.T01:intron 40.0%
TCAATGACAACTTCACTTCG+TGG + Chr4:1881738-1881757 MsG0480018226.01.T01:CDS 40.0%
TCTTGCATTGCTTCGTTACT+CGG - Chr4:1881933-1881952 None:intergenic 40.0%
TGAGGAGAACTCTTCAAAAG+TGG + Chr4:1881986-1882005 MsG0480018226.01.T01:CDS 40.0%
TGAGTCTGCAAACTATCCAA+AGG + Chr4:1888828-1888847 MsG0480018226.01.T01:CDS 40.0%
TGCAAGAATCAATCCACAAC+AGG + Chr4:1881946-1881965 MsG0480018226.01.T01:CDS 40.0%
TGTCCTCTCTTTATTGCAAC+AGG + Chr4:1884345-1884364 MsG0480018226.01.T01:intron 40.0%
TTACCAAATTGCCCCTCATA+GGG - Chr4:1880501-1880520 None:intergenic 40.0%
TTTACCAAATTGCCCCTCAT+AGG - Chr4:1880502-1880521 None:intergenic 40.0%
TTTGCAGACTCAAAATCAGG+TGG - Chr4:1888820-1888839 None:intergenic 40.0%
! AAGAGGTGCAACACATAAAG+CGG - Chr4:1887706-1887725 None:intergenic 40.0%
! CATTTGACGACTTTTGTTGC+AGG + Chr4:1889209-1889228 MsG0480018226.01.T01:intron 40.0%
! CTATCAGCAACTAGAGCATT+TGG + Chr4:1879909-1879928 MsG0480018226.01.T01:CDS 40.0%
! TATTGCTAGCATTTTCCGCA+TGG + Chr4:1889172-1889191 MsG0480018226.01.T01:intron 40.0%
! TTACCATTTTGCCCCTATGA+GGG + Chr4:1880486-1880505 MsG0480018226.01.T01:intron 40.0%
! TTTACCATTTTGCCCCTATG+AGG + Chr4:1880485-1880504 MsG0480018226.01.T01:intron 40.0%
! TTTCACCTCCTCAGATTTTC+TGG + Chr4:1886903-1886922 MsG0480018226.01.T01:intron 40.0%
!! AAAGTTTTTCGGTTGGATCG+AGG + Chr4:1882342-1882361 MsG0480018226.01.T01:intron 40.0%
!! AATCTCTGAGACTTTAGGTG+AGG - Chr4:1881892-1881911 None:intergenic 40.0%
!! ACATTAGGAGGAGTATCTTC+CGG - Chr4:1888676-1888695 None:intergenic 40.0%
!! GTGTGTTTGCTATCCAACAT+CGG + Chr4:1888364-1888383 MsG0480018226.01.T01:intron 40.0%
!!! ATTGAGGATTTTTAGGTGGG+CGG - Chr4:1882879-1882898 None:intergenic 40.0%
!!! CATGTTCCTGCTTTTTTGAG+GGG - Chr4:1885211-1885230 None:intergenic 40.0%
!!! CTCTTTTTTGAACCCTACCA+TGG - Chr4:1888487-1888506 None:intergenic 40.0%
AACCTTTCCCTCCCTTATGA+TGG - Chr4:1885334-1885353 None:intergenic 45.0%
AACGCCTTATCCCACTAAGT+GGG - Chr4:1883243-1883262 None:intergenic 45.0%
AAGCGTTCCATCAAAGAGAC+AGG + Chr4:1885869-1885888 MsG0480018226.01.T01:intron 45.0%
AAGGAGCTGAAGAACCTTTG+TGG + Chr4:1882043-1882062 MsG0480018226.01.T01:intron 45.0%
AATTGCAAGGTTAGGACTGC+TGG + Chr4:1883940-1883959 MsG0480018226.01.T01:CDS 45.0%
ACAAACACGACACTGACACA+TGG - Chr4:1888431-1888450 None:intergenic 45.0%
ACACTATCCAAACAGCCACA+TGG - Chr4:1887867-1887886 None:intergenic 45.0%
ACATGGAGGCTACACTAAAG+AGG - Chr4:1887954-1887973 None:intergenic 45.0%
ACCATTCCCCTCAAAAAAGC+AGG + Chr4:1885202-1885221 MsG0480018226.01.T01:intron 45.0%
ACCTGAGCGCAAATACGAAT+CGG + Chr4:1882536-1882555 MsG0480018226.01.T01:intron 45.0%
ACTGAGCAAATGGCAGATGA+AGG + Chr4:1889396-1889415 MsG0480018226.01.T01:CDS 45.0%
AGCGTTCCATCAAAGAGACA+GGG + Chr4:1885870-1885889 MsG0480018226.01.T01:intron 45.0%
AGGCACATAGATTGCTTGAG+TGG - Chr4:1883805-1883824 None:intergenic 45.0%
AGGGGGAATAAAAACCCATG+TGG + Chr4:1887849-1887868 MsG0480018226.01.T01:intron 45.0%
ATGCAAGGAAACCAACATGG+AGG - Chr4:1887968-1887987 None:intergenic 45.0%
ATGTTTGTCAGACACATCCG+CGG + Chr4:1884075-1884094 MsG0480018226.01.T01:intron 45.0%
ATTGCCGTTGTGGGAGATTA+AGG + Chr4:1880699-1880718 MsG0480018226.01.T01:intron 45.0%
CACTATCCAAACAGCCACAT+GGG - Chr4:1887866-1887885 None:intergenic 45.0%
CATCTACAATTGAGGCACAC+TGG + Chr4:1885014-1885033 MsG0480018226.01.T01:intron 45.0%
CATGGAGGCTACACTAAAGA+GGG - Chr4:1887953-1887972 None:intergenic 45.0%
CCGGTTCAAGAAACACGTAA+TGG + Chr4:1885728-1885747 MsG0480018226.01.T01:intron 45.0%
CCTTCTGCAACACCATCATA+AGG + Chr4:1885319-1885338 MsG0480018226.01.T01:CDS 45.0%
CTATGTTGTTGTGCACACAG+TGG + Chr4:1885107-1885126 MsG0480018226.01.T01:intron 45.0%
CTCCGAAAGCTCAGAAACTT+CGG - Chr4:1888716-1888735 None:intergenic 45.0%
CTGCAAACTATCCAAAGGGA+TGG + Chr4:1888833-1888852 MsG0480018226.01.T01:CDS 45.0%
CTTTAGTGTAGCCTCCATGT+TGG + Chr4:1887954-1887973 MsG0480018226.01.T01:intron 45.0%
GAGTCCTGCATTTCCACATT+AGG - Chr4:1888691-1888710 None:intergenic 45.0%
GATACAGCTAAAACACCACC+CGG + Chr4:1888645-1888664 MsG0480018226.01.T01:CDS 45.0%
GCTACATAGAGCTCTATACC+AGG - Chr4:1888324-1888343 None:intergenic 45.0%
GCTCTAGTTGCTGATAGAGT+TGG - Chr4:1879906-1879925 None:intergenic 45.0%
GGAAGATACTCCTCCTAATG+TGG + Chr4:1888675-1888694 MsG0480018226.01.T01:CDS 45.0%
GGGAAAGGTTTGCCTTCTAA+TGG + Chr4:1885344-1885363 MsG0480018226.01.T01:intron 45.0%
GGGATGAATTTAAGAGGAGG+TGG + Chr4:1885994-1886013 MsG0480018226.01.T01:intron 45.0%
GGTGACAAAAACCTTGCAGT+TGG + Chr4:1879954-1879973 MsG0480018226.01.T01:CDS 45.0%
GTTGTTCCTGGACATTGCAT+AGG + Chr4:1885244-1885263 MsG0480018226.01.T01:intron 45.0%
TACCAAATTGCCCCTCATAG+GGG - Chr4:1880500-1880519 None:intergenic 45.0%
TACGCTTCTCTCTCTTCTCT+TGG - Chr4:1887324-1887343 None:intergenic 45.0%
TATCACCCTCTTGTAAGTCG+CGG - Chr4:1884020-1884039 None:intergenic 45.0%
TATCCAAAGGGATGGCTGAT+TGG + Chr4:1888841-1888860 MsG0480018226.01.T01:CDS 45.0%
TCCTCCTAATGTGGAAATGC+AGG + Chr4:1888684-1888703 MsG0480018226.01.T01:CDS 45.0%
TCCTGCATTTCCACATTAGG+AGG - Chr4:1888688-1888707 None:intergenic 45.0%
TGCAACACCATCATAAGGGA+GGG + Chr4:1885324-1885343 MsG0480018226.01.T01:CDS 45.0%
TGCCGAAGTTTCTGAGCTTT+CGG + Chr4:1888711-1888730 MsG0480018226.01.T01:CDS 45.0%
TGCTTCTACACTGTCGTTGT+GGG + Chr4:1881415-1881434 MsG0480018226.01.T01:intron 45.0%
TGCTTCTACATTGCCGTTGT+GGG + Chr4:1880690-1880709 MsG0480018226.01.T01:intron 45.0%
TTGCTTCTACACTGTCGTTG+TGG + Chr4:1881414-1881433 MsG0480018226.01.T01:intron 45.0%
TTGCTTCTACATTGCCGTTG+TGG + Chr4:1880689-1880708 MsG0480018226.01.T01:intron 45.0%
TTTCCAATCAGCCATCCCTT+TGG - Chr4:1888847-1888866 None:intergenic 45.0%
TTTGATTACAGTGCATGGGC+TGG + Chr4:1879933-1879952 MsG0480018226.01.T01:CDS 45.0%
! ACCTCTTTTCAACTCACGCT+GGG + Chr4:1880913-1880932 MsG0480018226.01.T01:intron 45.0%
! GAGAGAGAAGCGTACAATAG+TGG + Chr4:1887330-1887349 MsG0480018226.01.T01:intron 45.0%
! GTCATGGATGATGCTTTGGA+TGG + Chr4:1886869-1886888 MsG0480018226.01.T01:intron 45.0%
! GTCGTCAAATGCATTAGCCT+CGG - Chr4:1889200-1889219 None:intergenic 45.0%
! TACCATTTTGCCCCTATGAG+GGG + Chr4:1880487-1880506 MsG0480018226.01.T01:intron 45.0%
!! AGATGGACTAAACGAACAGC+TGG + Chr4:1889242-1889261 MsG0480018226.01.T01:CDS 45.0%
!! CACTAAAGAGGGTTGGTTGA+AGG - Chr4:1887942-1887961 None:intergenic 45.0%
!! CCTTATGATGGTGTTGCAGA+AGG - Chr4:1885322-1885341 None:intergenic 45.0%
!! CTGACAAACATTTTGGTCGG+TGG - Chr4:1884066-1884085 None:intergenic 45.0%
!! CTTGCAGTTGGTGACAATCT+CGG + Chr4:1879966-1879985 MsG0480018226.01.T01:CDS 45.0%
!! TAAAGAGGGTTGGTTGAAGG+TGG - Chr4:1887939-1887958 None:intergenic 45.0%
!! TTTTATGAGCACGTGATGGG+TGG - Chr4:1886462-1886481 None:intergenic 45.0%
!!! TCCTGCTTTTTTGAGGGGAA+TGG - Chr4:1885206-1885225 None:intergenic 45.0%
!! AATATTAAAAAATAAAGAAA+AGG - Chr4:1883567-1883586 None:intergenic 5.0%
!! ATAGTTAAAAATATAAAAAT+TGG - Chr4:1880642-1880661 None:intergenic 5.0%
!! TAATTTACTTAATTTATTAT+CGG - Chr4:1882792-1882811 None:intergenic 5.0%
!!! GTTTTTAAAAATATAAAAAT+TGG - Chr4:1881331-1881350 None:intergenic 5.0%
!!! TTACAAATTTTAAAAATTAA+AGG - Chr4:1886075-1886094 None:intergenic 5.0%
!!! TTTTTTTATGATAAAAATTT+TGG - Chr4:1887445-1887464 None:intergenic 5.0%
AAAACACCACCCGGAACAAC+CGG + Chr4:1888654-1888673 MsG0480018226.01.T01:CDS 50.0%
AAATGCTCACAGGTACCCGT+GGG + Chr4:1882635-1882654 MsG0480018226.01.T01:intron 50.0%
AACGTGTTCACCACAGCTAG+CGG + Chr4:1888597-1888616 MsG0480018226.01.T01:intron 50.0%
AAGACCAGGAAGGAGCCAAA+TGG + Chr4:1886533-1886552 MsG0480018226.01.T01:intron 50.0%
AAGCACAAGCATGCACACAC+TGG - Chr4:1889479-1889498 None:intergenic 50.0%
ACGCCTTATCCCACTAAGTG+GGG - Chr4:1883242-1883261 None:intergenic 50.0%
ACTAAACGAACAGCTGGAGG+AGG + Chr4:1889248-1889267 MsG0480018226.01.T01:CDS 50.0%
ACTGTTACCCGGATCATCGT+CGG + Chr4:1886426-1886445 MsG0480018226.01.T01:intron 50.0%
AGACCAGGAAGGAGCCAAAT+GGG + Chr4:1886534-1886553 MsG0480018226.01.T01:intron 50.0%
AGCTAGCGGGAGGAATTTAG+AGG + Chr4:1888611-1888630 MsG0480018226.01.T01:intron 50.0%
AGGTGGAGGAAGCAAAGACT+CGG - Chr4:1888803-1888822 None:intergenic 50.0%
AGTTATGGGACAGCTAACCC+TGG + Chr4:1887910-1887929 MsG0480018226.01.T01:intron 50.0%
ATAGATCCCTGGCCATGGTA+GGG + Chr4:1888472-1888491 MsG0480018226.01.T01:intron 50.0%
ATATACGGCCAGGAAAGAGG+CGG + Chr4:1885496-1885515 MsG0480018226.01.T01:intron 50.0%
ATCGGCACGACACGATACAT+TGG + Chr4:1888382-1888401 MsG0480018226.01.T01:intron 50.0%
CAACGCCTTATCCCACTAAG+TGG - Chr4:1883244-1883263 None:intergenic 50.0%
CACCATCATAAGGGAGGGAA+AGG + Chr4:1885329-1885348 MsG0480018226.01.T01:CDS 50.0%
CATAGATAGATCCCTGGCCA+TGG + Chr4:1888467-1888486 MsG0480018226.01.T01:intron 50.0%
CATCCACCTATGCAATGTCC+AGG - Chr4:1885253-1885272 None:intergenic 50.0%
CCACTTATGAGGTCCACTTC+TGG + Chr4:1882366-1882385 MsG0480018226.01.T01:intron 50.0%
CCAGAAGTGGACCTCATAAG+TGG - Chr4:1882369-1882388 None:intergenic 50.0%
CGAGATTGTCACCAACTGCA+AGG - Chr4:1879968-1879987 None:intergenic 50.0%
CTGATATACGGCCAGGAAAG+AGG + Chr4:1885493-1885512 MsG0480018226.01.T01:intron 50.0%
CTGCAACACCATCATAAGGG+AGG + Chr4:1885323-1885342 MsG0480018226.01.T01:CDS 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr4:1883238-1883257 None:intergenic 50.0%
GAGGCTACACTAAAGAGGGT+TGG - Chr4:1887949-1887968 None:intergenic 50.0%
GAGTATCTTCCGGTTGTTCC+GGG - Chr4:1888666-1888685 None:intergenic 50.0%
GCAGACTCAAAATCAGGTGG+AGG - Chr4:1888817-1888836 None:intergenic 50.0%
GCAGATGAAGGCCAAGAAGT+GGG + Chr4:1889408-1889427 MsG0480018226.01.T01:CDS 50.0%
GCGACTTACAAGAGGGTGAT+AGG + Chr4:1884019-1884038 MsG0480018226.01.T01:CDS 50.0%
GCGGAGAGTCAGGTTAAAAG+AGG + Chr4:1883096-1883115 MsG0480018226.01.T01:CDS 50.0%
GCGTTCCATCAAAGAGACAG+GGG + Chr4:1885871-1885890 MsG0480018226.01.T01:intron 50.0%
GTAGACCGCGACTTACAAGA+GGG + Chr4:1884012-1884031 MsG0480018226.01.T01:CDS 50.0%
GTTCACCCCTGTCTCTTTGA+TGG - Chr4:1885879-1885898 None:intergenic 50.0%
GTTCCTGGACATTGCATAGG+TGG + Chr4:1885247-1885266 MsG0480018226.01.T01:intron 50.0%
GTTGCAGAAGGCAGTAGAAG+CGG - Chr4:1885310-1885329 None:intergenic 50.0%
TAAATGCTCACAGGTACCCG+TGG + Chr4:1882634-1882653 MsG0480018226.01.T01:intron 50.0%
TAAATTCCTCCCGCTAGCTG+TGG - Chr4:1888610-1888629 None:intergenic 50.0%
TATGCTCTCCGACGATGATC+CGG - Chr4:1886437-1886456 None:intergenic 50.0%
TCTTCTTACCACGGCGTCTA+CGG - Chr4:1883064-1883083 None:intergenic 50.0%
TGAAGATGCACCCTGCATAG+TGG - Chr4:1885398-1885417 None:intergenic 50.0%
TGCATTGCTTCGTTACTCGG+TGG - Chr4:1881930-1881949 None:intergenic 50.0%
TGGACTAAACGAACAGCTGG+AGG + Chr4:1889245-1889264 MsG0480018226.01.T01:CDS 50.0%
TGGATCGAGGTCCACTTATG+AGG + Chr4:1882355-1882374 MsG0480018226.01.T01:intron 50.0%
TTATCGGGTATGGGTATCCG+TGG - Chr4:1882776-1882795 None:intergenic 50.0%
TTTGAACCCTACCATGGCCA+GGG - Chr4:1888481-1888500 None:intergenic 50.0%
! AGATCAAATGGCGGAGAGTC+AGG + Chr4:1883086-1883105 MsG0480018226.01.T01:CDS 50.0%
! ATGTGGTCGAAAGCATGCGA+AGG + Chr4:1888890-1888909 MsG0480018226.01.T01:CDS 50.0%
! ATTGCTTCGTTACTCGGTGG+AGG - Chr4:1881927-1881946 None:intergenic 50.0%
! CACCTCTTTTCAACTCACGC+TGG + Chr4:1880912-1880931 MsG0480018226.01.T01:intron 50.0%
! CGGCCGTTGCTGTTCTTTAT+AGG - Chr4:1888769-1888788 None:intergenic 50.0%
! GGAGTATCTTCCGGTTGTTC+CGG - Chr4:1888667-1888686 None:intergenic 50.0%
! TCCCAGCGTGAGTTGAAAAG+AGG - Chr4:1880917-1880936 None:intergenic 50.0%
! TTTTGAACCCTACCATGGCC+AGG - Chr4:1888482-1888501 None:intergenic 50.0%
!! ACCGATTCGTATTTGCGCTC+AGG - Chr4:1882540-1882559 None:intergenic 50.0%
AACAGCTGGAGGAGGATTCG+CGG + Chr4:1889256-1889275 MsG0480018226.01.T01:CDS 55.0%
AAGACTCGGCAGAGAGTCGT+CGG - Chr4:1888789-1888808 None:intergenic 55.0%
AAGGTTAGGACTGCTGGCAG+AGG + Chr4:1883946-1883965 MsG0480018226.01.T01:CDS 55.0%
ACCACACCCTCCACTATGCA+GGG + Chr4:1885385-1885404 MsG0480018226.01.T01:intron 55.0%
ACGTGTTCACCACAGCTAGC+GGG + Chr4:1888598-1888617 MsG0480018226.01.T01:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr4:1883230-1883249 None:intergenic 55.0%
AGATGCACCCTGCATAGTGG+AGG - Chr4:1885395-1885414 None:intergenic 55.0%
AGGTTAGGACTGCTGGCAGA+GGG + Chr4:1883947-1883966 MsG0480018226.01.T01:CDS 55.0%
ATGCTCTCCGACGATGATCC+GGG - Chr4:1886436-1886455 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr4:1883229-1883248 MsG0480018226.01.T01:intron 55.0%
CCCGTGGGTAAAATCCGTCA+CGG + Chr4:1882650-1882669 MsG0480018226.01.T01:intron 55.0%
CCGTGGGTAAAATCCGTCAC+GGG + Chr4:1882651-1882670 MsG0480018226.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr4:1883236-1883255 MsG0480018226.01.T01:intron 55.0%
CGTAGACCGCGACTTACAAG+AGG + Chr4:1884011-1884030 MsG0480018226.01.T01:CDS 55.0%
CTTCTTACCACGGCGTCTAC+GGG - Chr4:1883063-1883082 None:intergenic 55.0%
GACCAGGAAGGAGCCAAATG+GGG + Chr4:1886535-1886554 MsG0480018226.01.T01:intron 55.0%
GATAGATCCCTGGCCATGGT+AGG + Chr4:1888471-1888490 MsG0480018226.01.T01:intron 55.0%
GCACTTGCAAGTGCAGCTTG+TGG + Chr4:1889287-1889306 MsG0480018226.01.T01:CDS 55.0%
GGCAGATGAAGGCCAAGAAG+TGG + Chr4:1889407-1889426 MsG0480018226.01.T01:CDS 55.0%
GGCCAAGAAGTGGGAGATGA+AGG + Chr4:1889417-1889436 MsG0480018226.01.T01:CDS 55.0%
GGCCTTCATCTCCCACTTCT+TGG - Chr4:1889422-1889441 None:intergenic 55.0%
GGTAAAATCCGTCACGGGCA+TGG + Chr4:1882656-1882675 MsG0480018226.01.T01:intron 55.0%
GGTGTGGTGGTAGTTGCAGT+GGG - Chr4:1885373-1885392 None:intergenic 55.0%
GTGTGGTGGTAGTTGCAGTG+GGG - Chr4:1885372-1885391 None:intergenic 55.0%
TATCTTCCGGTTGTTCCGGG+TGG - Chr4:1888663-1888682 None:intergenic 55.0%
TGCCCCTATGAGGGGCAATT+TGG + Chr4:1880495-1880514 MsG0480018226.01.T01:intron 55.0%
TGCCCCTCATAGGGGCAAAA+TGG - Chr4:1880492-1880511 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr4:1883230-1883249 MsG0480018226.01.T01:intron 55.0%
TTGGTTGAAGGTGGAGGCCA+GGG - Chr4:1887930-1887949 None:intergenic 55.0%
TTGTCAACCCGTGCTTCGCA+CGG - Chr4:1884948-1884967 None:intergenic 55.0%
! GATGCACCCTGCATAGTGGA+GGG - Chr4:1885394-1885413 None:intergenic 55.0%
! GCATTAGCCTCGGTTCCATG+CGG - Chr4:1889190-1889209 None:intergenic 55.0%
! GCATTTTCCGCATGGAACCG+AGG + Chr4:1889180-1889199 MsG0480018226.01.T01:intron 55.0%
! GTATCGTGTCGTGCCGATGT+TGG - Chr4:1888380-1888399 None:intergenic 55.0%
!! AGAGGGTTGGTTGAAGGTGG+AGG - Chr4:1887936-1887955 None:intergenic 55.0%
!! TGAGCTTTCGGAGCGTCGAA+AGG + Chr4:1888723-1888742 MsG0480018226.01.T01:CDS 55.0%
!! TGCAGTGGGGTGCCATTAGA+AGG - Chr4:1885359-1885378 None:intergenic 55.0%
!!! CCCGTGACGGATTTTACCCA+CGG - Chr4:1882654-1882673 None:intergenic 55.0%
!!! CCGTGACGGATTTTACCCAC+GGG - Chr4:1882653-1882672 None:intergenic 55.0%
AATCCACCCCGTGCGAAGCA+CGG + Chr4:1884937-1884956 MsG0480018226.01.T01:intron 60.0%
AATCCGTCACGGGCATGGAG+CGG + Chr4:1882661-1882680 MsG0480018226.01.T01:intron 60.0%
CACCACACCCTCCACTATGC+AGG + Chr4:1885384-1885403 MsG0480018226.01.T01:intron 60.0%
CGAAGGTCGTGTGCTTCGCA+CGG - Chr4:1884744-1884763 None:intergenic 60.0%
GAAGGTCGTGTGCTTCGCAC+GGG - Chr4:1884743-1884762 None:intergenic 60.0%
GGAAAGAGGCGGTGCATCCA+TGG + Chr4:1885507-1885526 MsG0480018226.01.T01:intron 60.0%
GGGTGTGGTGGTAGTTGCAG+TGG - Chr4:1885374-1885393 None:intergenic 60.0%
GTTGGTTGAAGGTGGAGGCC+AGG - Chr4:1887931-1887950 None:intergenic 60.0%
TGGATGCACCGCCTCTTTCC+TGG - Chr4:1885507-1885526 None:intergenic 60.0%
TGTCAACCCGTGCTTCGCAC+GGG - Chr4:1884947-1884966 None:intergenic 60.0%
TGTTCACCACAGCTAGCGGG+AGG + Chr4:1888601-1888620 MsG0480018226.01.T01:intron 60.0%
! ACCCTGCATAGTGGAGGGTG+TGG - Chr4:1885389-1885408 None:intergenic 60.0%
! CTGCATAGTGGAGGGTGTGG+TGG - Chr4:1885386-1885405 None:intergenic 60.0%
! GTCCCCATTTGGCTCCTTCC+TGG - Chr4:1886540-1886559 None:intergenic 60.0%
ATCCACCCCGTGCGAAGCAC+GGG + Chr4:1884938-1884957 MsG0480018226.01.T01:intron 65.0%
ATCCGTCACGGGCATGGAGC+GGG + Chr4:1882662-1882681 MsG0480018226.01.T01:intron 65.0%
GTCAACCCGTGCTTCGCACG+GGG - Chr4:1884946-1884965 None:intergenic 65.0%
TACCCGCTCCATGCCCGTGA+CGG - Chr4:1882667-1882686 None:intergenic 65.0%
TGCGGGTGGGGTTCCAGAAG+TGG - Chr4:1882382-1882401 None:intergenic 65.0%
AACCCGTGCTTCGCACGGGG+TGG - Chr4:1884943-1884962 None:intergenic 70.0%
GAGAAGGCCCGTAGACGCCG+TGG + Chr4:1883053-1883072 MsG0480018226.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 1879894 1889661 1879894 ID=MsG0480018226.01;Name=MsG0480018226.01
Chr4 mRNA 1879894 1889661 1879894 ID=MsG0480018226.01.T01;Parent=MsG0480018226.01;Name=MsG0480018226.01.T01;_AED=0.48;_eAED=0.72;_QI=0|0.16|0.14|1|1|1|7|206|476
Chr4 exon 1879894 1879987 1879894 ID=MsG0480018226.01.T01:exon:1011;Parent=MsG0480018226.01.T01
Chr4 exon 1881670 1882020 1881670 ID=MsG0480018226.01.T01:exon:1012;Parent=MsG0480018226.01.T01
Chr4 exon 1883052 1883194 1883052 ID=MsG0480018226.01.T01:exon:1013;Parent=MsG0480018226.01.T01
Chr4 exon 1883853 1884076 1883853 ID=MsG0480018226.01.T01:exon:1014;Parent=MsG0480018226.01.T01
Chr4 exon 1885266 1885350 1885266 ID=MsG0480018226.01.T01:exon:1015;Parent=MsG0480018226.01.T01
Chr4 exon 1888631 1888939 1888631 ID=MsG0480018226.01.T01:exon:1016;Parent=MsG0480018226.01.T01
Chr4 exon 1889231 1889661 1889231 ID=MsG0480018226.01.T01:exon:1017;Parent=MsG0480018226.01.T01
Chr4 CDS 1879894 1879987 1879894 ID=MsG0480018226.01.T01:cds;Parent=MsG0480018226.01.T01
Chr4 CDS 1881670 1882020 1881670 ID=MsG0480018226.01.T01:cds;Parent=MsG0480018226.01.T01
Chr4 CDS 1883052 1883194 1883052 ID=MsG0480018226.01.T01:cds;Parent=MsG0480018226.01.T01
Chr4 CDS 1883853 1884076 1883853 ID=MsG0480018226.01.T01:cds;Parent=MsG0480018226.01.T01
Chr4 CDS 1885266 1885350 1885266 ID=MsG0480018226.01.T01:cds;Parent=MsG0480018226.01.T01
Chr4 CDS 1888631 1888939 1888631 ID=MsG0480018226.01.T01:cds;Parent=MsG0480018226.01.T01
Chr4 CDS 1889231 1889455 1889231 ID=MsG0480018226.01.T01:cds;Parent=MsG0480018226.01.T01
Chr4 three_prime_UTR 1889456 1889661 1889456 ID=MsG0480018226.01.T01:three_prime_utr;Parent=MsG0480018226.01.T01
Gene Sequence

>MsG0480018226.01.T01

ATGATATTGCCAACTCTATCAGCAACTAGAGCATTTGGTTTTGATTACAGTGCATGGGCTGGTGACAAAAACCTTGCAGTTGGTGACAATCTCGTTTGCATTTTCACTCATATTTTAATCTTTTGGAAATTGTATTCTGGCATGTATATTTTGTATAATATTTCAATGACAACTTCACTTCGTGGTAATAATAACCAACTTCGTAATAACACTAACATGATCACAACTTCTACAGCTGCATTACCTAACAAACCATTAATATATACTGCTGTGAATTCTAAGGTGAATCAGGAAATAGAAGAAAGTAATGTTACCTCACCTAAAGTCTCAGAGATTCAAATCTCTACTCCTCCACCGAGTAACGAAGCAATGCAAGAATCAATCCACAACAGGAAGAAATGGATAAATGATGAGGAGAACTCTTCAAAAGTGGTGATAGGATTTCAGAGAAGGCCCGTAGACGCCGTGGTAAGAAGAGTAGATCAAATGGCGGAGAGTCAGGTTAAAAGAGGTAGAGGAAGACCTAAGAAAACTATTAGAGAAACCATTAGAAAAGATTTAGAGGTCAATGAGTTGGATCCAAATATGCATTTTCCAAATCAAATATCCAAAAGAGTCTTGAAAAGAAAGTATCTAAGGATGACTTTAGAAGATGTGGAAACACACAAGACATATAATTGCAAGGTTAGGACTGCTGGCAGAGGGAATGCTGAGAAAAATTTAGGTGGTGAATGGTTTGACTTCATCGTAGACCGCGACTTACAAGAGGGTGATAGGTTGATCTTTGATTTGGAGGATCCACCGACCAAAATGTGGATGAAGCTTTCTGTTAAGGTTAAAGCTTCTTCTGGTGCCGCTTCTACTGCCTTCTGCAACACCATCATAAGGGAGGGAAAGAGGTATCATCAGAAGATACAGCTAAAACACCACCCGGAACAACCGGAAGATACTCCTCCTAATGTGGAAATGCAGGACTCTGCCGAAGTTTCTGAGCTTTCGGAGCGTCGAAAGGCCTTGTTTGAACCATTAGAACCTATAAAGAACAGCAACGGCCGACGACTCTCTGCCGAGTCTTTGCTTCCTCCACCTGATTTTGAGTCTGCAAACTATCCAAAGGGATGGCTGATTGGAAAGAAACGAAAGCTTGTCAATGTTGATGTGGTCGAAAGCATGCGAAGGATTGCTGTCCAAGAAATGAACAGAAAGGATAGAGAAATAGATGGACTAAACGAACAGCTGGAGGAGGATTCGCGGTGTCTAGAGCACTTGCAAGTGCAGCTTGTGGACGAAAGAAGCAAACGCTCTCGACTCGAGAGAGAAAATGAAATGCTTCAAGATCAAGTAAACATGCTTATGAACATGTTACAAGAAACTGAGCAAATGGCAGATGAAGGCCAAGAAGTGGGAGATGAAGGCCAAGATGAACCTTGA

Protein sequence

>MsG0480018226.01.T01

MILPTLSATRAFGFDYSAWAGDKNLAVGDNLVCIFTHILIFWKLYSGMYILYNISMTTSLRGNNNQLRNNTNMITTSTAALPNKPLIYTAVNSKVNQEIEESNVTSPKVSEIQISTPPPSNEAMQESIHNRKKWINDEENSSKVVIGFQRRPVDAVVRRVDQMAESQVKRGRGRPKKTIRETIRKDLEVNELDPNMHFPNQISKRVLKRKYLRMTLEDVETHKTYNCKVRTAGRGNAEKNLGGEWFDFIVDRDLQEGDRLIFDLEDPPTKMWMKLSVKVKASSGAASTAFCNTIIREGKRYHQKIQLKHHPEQPEDTPPNVEMQDSAEVSELSERRKALFEPLEPIKNSNGRRLSAESLLPPPDFESANYPKGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLEEDSRCLEHLQVQLVDERSKRSRLERENEMLQDQVNMLMNMLQETEQMADEGQEVGDEGQDEP*