AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0002410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0002410 MtrunA17_Chr4g0056041 91.875 1563 50 5 7 1492 641 2203 0.0 2870
Msa0002410 MtrunA17_Chr5g0399321 57.657 862 275 14 670 1491 1366 2177 0.0 771
Msa0002410 MtrunA17_Chr5g0399321 50.492 711 251 14 33 663 749 1438 3.10e-168 558
Msa0002410 MtrunA17_Chr2g0293961 31.298 131 75 4 1106 1221 257 387 4.00e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0002410 AT4G17330.2 38.610 878 417 23 678 1493 1162 1979 5.09e-118 411
Msa0002410 AT4G17330.2 38.257 413 191 15 239 619 809 1189 6.85e-51 199
Msa0002410 AT4G17330.1 38.610 878 417 23 678 1493 1162 1979 5.09e-118 411
Msa0002410 AT4G17330.1 38.257 413 191 15 239 619 809 1189 6.85e-51 199
Msa0002410 AT4G17330.3 38.610 878 417 23 678 1493 1127 1944 7.19e-118 410
Msa0002410 AT4G17330.3 38.257 413 191 15 239 619 774 1154 9.73e-51 198

Find 399 sgRNAs with CRISPR-Local

Find 797 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTGCTTCTTTATCTATTT+TGG 0.083863 1_1:-4299330 None:intergenic
CCCTAGAAGTATTACGATTT+TGG 0.163667 1_1:-4308940 None:intergenic
TTAGACATTTGAGAGGTTTC+TGG 0.169727 1_1:-4304633 None:intergenic
GATGAAGCATTGATCGTTTC+TGG 0.176319 1_1:+4304213 Msa0002410:CDS
ATTTCCCATCATTCCAAATA+AGG 0.187812 1_1:-4307673 None:intergenic
AAAGTTGTATATTATATAAT+AGG 0.203942 1_1:+4309141 Msa0002410:three_prime_UTR
TTCTCCGTCCATCCCTTATT+TGG 0.219869 1_1:+4307660 Msa0002410:CDS
TCACCGGCATTTGCTCCTAT+TGG 0.220938 1_1:-4300531 None:intergenic
GGGGAAGAATACAAAATTTA+TGG 0.224208 1_1:+4308085 Msa0002410:CDS
CACCGGCATTTGCTCCTATT+GGG 0.236962 1_1:-4300530 None:intergenic
ACCAAAATCGTAATACTTCT+AGG 0.237431 1_1:+4308939 Msa0002410:three_prime_UTR
TCCTTTCCGGCTGTCTTATT+AGG 0.241626 1_1:-4301017 None:intergenic
TCTCCACTGGCTTCTGAATT+AGG 0.244794 1_1:+4300879 Msa0002410:CDS
CTTTGCTTAACTGCCAAATC+TGG 0.247246 1_1:-4302911 None:intergenic
AACGAGGCACACCAGTATTA+TGG 0.248258 1_1:+4301152 Msa0002410:CDS
CCACCACTGCGAAACTTTCT+TGG 0.249633 1_1:+4303142 Msa0002410:CDS
AACTGCAGCAGAAGCTAATT+TGG 0.253827 1_1:-4304100 None:intergenic
GGAGATGACAGAGGAATAAA+AGG 0.260842 1_1:-4303007 None:intergenic
GTCCTTCAAACTTAATATAT+TGG 0.263908 1_1:-4305155 None:intergenic
GGTCTACCAGCTTCTAATTT+AGG 0.272752 1_1:+4303340 Msa0002410:CDS
CCAGCAAGACGGTCAGAAAA+AGG 0.274936 1_1:+4301071 Msa0002410:CDS
AAAACGTTCTGTGGCCTTCC+AGG 0.280564 1_1:-4308284 None:intergenic
GCCCATATGCTATCTGCTTT+TGG 0.280669 1_1:+4302081 Msa0002410:CDS
AGTGCAGAATTACCTAATTT+AGG 0.284178 1_1:-4307846 None:intergenic
TATGTTACCATTTGATATAT+TGG 0.294199 1_1:-4309310 None:intergenic
ACTTGCTGAACATCCATAAA+AGG 0.313486 1_1:-4301254 None:intergenic
ACTCCCAAACCCAGTGTATC+TGG 0.318875 1_1:+4300903 Msa0002410:CDS
TTCCTCTGTCATCTCCCCTT+TGG 0.320155 1_1:+4303014 Msa0002410:CDS
GTTGATCCCTGTCCTGTTGC+TGG 0.320985 1_1:+4299386 Msa0002410:CDS
TGGAAGGCCACAGAACGTTT+TGG 0.322472 1_1:+4308286 Msa0002410:CDS
ATGTGAATCAATAGAGAAAC+AGG 0.323438 1_1:+4299535 Msa0002410:CDS
TACCCTCGGAAAGATAAATT+TGG 0.325210 1_1:-4304251 None:intergenic
TCCTGTTGGGTCTTCTGAAC+TGG 0.332469 1_1:+4299361 Msa0002410:CDS
TTCTTACTCTTGATGTTGGT+TGG 0.337854 1_1:-4308669 None:intergenic
TCTTCAATACCGCATGCTTC+AGG 0.342385 1_1:+4308185 Msa0002410:CDS
CACATTCAGAACAGGGGTTT+CGG 0.343421 1_1:-4303833 None:intergenic
CGTGGACCATCTGTTACATT+TGG 0.352048 1_1:+4300294 Msa0002410:CDS
AGCTGGAAAGATCGTTACTA+TGG 0.354323 1_1:+4304470 Msa0002410:CDS
CTGTTATTTGCTCCCACCTT+AGG 0.356535 1_1:-4307707 None:intergenic
CGCAGTGGTGGAGTTTGATT+AGG 0.357517 1_1:-4303130 None:intergenic
TGGCGACAGCAGTGGATATA+TGG 0.357778 1_1:-4303552 None:intergenic
ATGCAGCTCATTATGAAAAT+CGG 0.359583 1_1:-4300232 None:intergenic
GACCAGATATGGTAGATTAT+TGG 0.361988 1_1:+4305939 Msa0002410:CDS
TTTGTATTCTTCCCCGGTTT+AGG 0.364087 1_1:-4308077 None:intergenic
CGCGCACAAATATTTGTCTA+TGG 0.364585 1_1:+4301284 Msa0002410:CDS
TTGCAAGGGCACTAGATTGC+AGG 0.367517 1_1:-4303063 None:intergenic
CCTTGCAAGAGGTCCTGCTT+TGG 0.369982 1_1:+4303078 Msa0002410:CDS
GACCAATAATCTACCATATC+TGG 0.372169 1_1:-4305941 None:intergenic
ATGGCAATGGATTTGAAAAT+CGG 0.372979 1_1:+4304889 Msa0002410:CDS
ATCGGGAAAAGAAGACGATA+TGG 0.374870 1_1:-4300214 None:intergenic
TGAATCATAGCATGGATATA+TGG 0.374968 1_1:+4304028 Msa0002410:CDS
CCATCCCTTATTTGGAATGA+TGG 0.375310 1_1:+4307668 Msa0002410:CDS
TGCTGGTGGTAGGTTGGGTA+AGG 0.376305 1_1:+4308565 Msa0002410:CDS
CAGAAAACGAGCTGAAAATA+TGG 0.376347 1_1:+4304401 Msa0002410:CDS
TGGCAAAAGCATTAGATATA+TGG 0.381584 1_1:-4303810 None:intergenic
TGGTAGATTATTGGTCCATT+GGG 0.383916 1_1:+4305948 Msa0002410:CDS
ATTACAAATTTGACCCCAAT+AGG 0.385963 1_1:+4300516 Msa0002410:CDS
TCCTTGTTGGCTGCAATAAC+AGG 0.386431 1_1:-4300567 None:intergenic
AATTTATCTTTCCGAGGGTA+TGG 0.387575 1_1:+4304254 Msa0002410:CDS
TTTCCCATCATTCCAAATAA+GGG 0.390059 1_1:-4307672 None:intergenic
TTATTTGGAATGATGGGAAA+TGG 0.392612 1_1:+4307675 Msa0002410:CDS
GGAGTAGATGGCAGAAATAC+AGG 0.395343 1_1:-4303628 None:intergenic
AATTACCACTGATTCCTTGT+TGG 0.397737 1_1:-4300580 None:intergenic
AGCAGTAATATGCAGATTAT+CGG 0.400615 1_1:-4299429 None:intergenic
GCTTCTACCAAGTCGCTTAA+CGG 0.405292 1_1:-4304504 None:intergenic
CAGGAGTTGATACTACTAGA+TGG 0.411245 1_1:-4303519 None:intergenic
GATAATATAGCTAGAGCTAT+TGG 0.412434 1_1:-4304328 None:intergenic
AGCCAATATATTAAGTTTGA+AGG 0.416927 1_1:+4305153 Msa0002410:CDS
GCACCTGCTGGTGGTAGGTT+GGG 0.421065 1_1:+4308560 Msa0002410:CDS
GTGCACAAAAGATTCTAGTA+TGG 0.421539 1_1:+4299502 Msa0002410:CDS
GAAAAGACCAAGACCAGATA+TGG 0.421598 1_1:+4305928 Msa0002410:CDS
TCCTTTGCCGTTAAGCGACT+TGG 0.423225 1_1:+4304497 Msa0002410:CDS
GCAGCAGAAGTGTTCAAATC+TGG 0.423511 1_1:-4301206 None:intergenic
TTACAAACAAAGTACCTCAT+TGG 0.424035 1_1:-4307735 None:intergenic
CACCAAAAGCAGATAGCATA+TGG 0.424957 1_1:-4302083 None:intergenic
CATAATGAGCTGCATGAGAC+TGG 0.425069 1_1:+4300240 Msa0002410:CDS
ATGTCCAGATACACTGGGTT+TGG 0.428644 1_1:-4300907 None:intergenic
TCTACGACTTGTCAAATCAT+TGG 0.428703 1_1:-4308354 None:intergenic
AGGATTAATGAGGGAGGAAA+TGG 0.429852 1_1:+4308143 Msa0002410:CDS
ACGAGGCACACCAGTATTAT+GGG 0.430589 1_1:+4301153 Msa0002410:CDS
AAAATAGTTCAAACGGATCA+AGG 0.433305 1_1:+4304793 Msa0002410:CDS
TGTCATCAATTGATCTCATA+TGG 0.433791 1_1:-4304746 None:intergenic
GACTCGGGAAGCACGTCAAT+GGG 0.435429 1_1:-4304843 None:intergenic
AACCCCTGCTTCCATCTTGA+AGG 0.436244 1_1:+4304293 Msa0002410:CDS
AATAGCTCTAGCTATATTAT+CGG 0.436709 1_1:+4304330 Msa0002410:CDS
CTCGCCAGTCTGTGTACATC+TGG 0.439033 1_1:-4308011 None:intergenic
ATAAAAGGGTTTACAGTGGT+TGG 0.439207 1_1:-4302992 None:intergenic
TCCTTTACTTACTCTTGCTG+TGG 0.439836 1_1:-4308531 None:intergenic
ATGGTAGATTATTGGTCCAT+TGG 0.442609 1_1:+4305947 Msa0002410:CDS
AGCAGCAGCTGCTGTTGCAA+AGG 0.443394 1_1:+4304131 Msa0002410:CDS
CCAAAATCGTAATACTTCTA+GGG 0.443762 1_1:+4308940 Msa0002410:three_prime_UTR
GTCTGCTTCTGTTGATGAAA+AGG 0.444407 1_1:+4299295 Msa0002410:CDS
ATCAATGAAAATAGTTCAAA+CGG 0.445600 1_1:+4304786 Msa0002410:CDS
AAGCTGGTCCAGAGGGTTGT+TGG 0.445817 1_1:+4304523 Msa0002410:CDS
GGGAATGATGTATCTAAAGA+TGG 0.446472 1_1:+4300441 Msa0002410:CDS
CAACTTGCTGAGAAGACTCT+TGG 0.447535 1_1:-4304554 None:intergenic
GTTACTGGCACATTCAGAAC+AGG 0.448316 1_1:-4303841 None:intergenic
CCTTTACTTACTCTTGCTGT+GGG 0.450312 1_1:-4308530 None:intergenic
AAGTTGTATATTATATAATA+GGG 0.451948 1_1:+4309142 Msa0002410:three_prime_UTR
ACATTTACTGTTTACTTCCC+AGG 0.452157 1_1:+4307531 Msa0002410:CDS
TGTCTTATTAGGTGCTCGCC+TGG 0.452355 1_1:-4301006 None:intergenic
ATCCATGCCAATATATCAAA+TGG 0.453214 1_1:+4309303 Msa0002410:three_prime_UTR
TGCAGCTCATTATGAAAATC+GGG 0.453350 1_1:-4300231 None:intergenic
TATTGTGAAGGCTGCTGAGC+TGG 0.454587 1_1:+4304428 Msa0002410:CDS
AGTGGGCTTGAAGTCAGCTC+TGG 0.455110 1_1:-4308255 None:intergenic
ACAACAGAGTCCGAGGATCT+TGG 0.455497 1_1:+4303730 Msa0002410:CDS
CAGATTCTTACTCTTGATGT+TGG 0.456106 1_1:-4308673 None:intergenic
TAATCTACCATATCTGGTCT+TGG 0.456218 1_1:-4305935 None:intergenic
AGATGGTCCACGATTATCAT+AGG 0.456633 1_1:-4300283 None:intergenic
CAAGAGTCTTCTCAGCAAGT+TGG 0.460327 1_1:+4304555 Msa0002410:CDS
CACCACTGCGAAACTTTCTT+GGG 0.460333 1_1:+4303143 Msa0002410:CDS
CTCATTATGCACCTTGTGAA+AGG 0.461893 1_1:-4304712 None:intergenic
AGGTACTAGAAGCCCAGATT+TGG 0.462432 1_1:+4302898 Msa0002410:intron
TGCACCTGCTGGTGGTAGGT+TGG 0.465401 1_1:+4308559 Msa0002410:CDS
GTATCTCTGAGCCCATCATC+TGG 0.467088 1_1:+4301110 Msa0002410:CDS
TGTCCAGATACACTGGGTTT+GGG 0.468146 1_1:-4300906 None:intergenic
GAAGTGTTCAAATCTGGAAA+TGG 0.468992 1_1:-4301200 None:intergenic
ATAATACTGGTGTGCCTCGT+TGG 0.469620 1_1:-4301150 None:intergenic
AGACTCGGGAAGCACGTCAA+TGG 0.469634 1_1:-4304844 None:intergenic
GTACACAGACTGGCGAGGTC+TGG 0.471243 1_1:+4308017 Msa0002410:CDS
CCTCGTTGGATTGCATCAAC+TGG 0.471456 1_1:-4301136 None:intergenic
GAAGCAGATTGCCGTAGGTC+AGG 0.473268 1_1:+4304683 Msa0002410:CDS
AAGGGTATCTCTTCACCTCT+TGG 0.473385 1_1:+4302947 Msa0002410:CDS
TGGAAATGGCTTTGTACTGA+TGG 0.473539 1_1:-4301186 None:intergenic
AAGAGTCTTCTCAGCAAGTT+GGG 0.474380 1_1:+4304556 Msa0002410:CDS
GTATTAAACAGAGGAGTAGT+TGG 0.476209 1_1:-4303382 None:intergenic
CAGATCACCATGAGCTTGAA+AGG 0.480974 1_1:+4299258 Msa0002410:CDS
TCCTGCTTTGGATTATTCAC+AGG 0.481731 1_1:+4303090 Msa0002410:CDS
TATTCTGAAACCACGGGAGC+AGG 0.482342 1_1:+4308449 Msa0002410:CDS
AAATCACCATCAGGTATTTG+TGG 0.483198 1_1:-4300945 None:intergenic
TGGCTGGAATGTTGAGAAGA+AGG 0.485610 1_1:+4303924 Msa0002410:CDS
TGCTCCCGTGGTTTCAGAAT+AGG 0.486565 1_1:-4308447 None:intergenic
GCTTCATCCTTTCAAGCTCA+TGG 0.488828 1_1:-4299265 None:intergenic
TTCAAGCCCACTTCTAAGCC+TGG 0.488993 1_1:+4308266 Msa0002410:CDS
GCACCCTTCAAGATGGAAGC+AGG 0.489906 1_1:-4304297 None:intergenic
TCTTCAGATGTTGATTTCAC+CGG 0.490115 1_1:-4308613 None:intergenic
AAAGGCTTCGAATGGAAATC+CGG 0.491978 1_1:+4308594 Msa0002410:CDS
GTTGGAAGACCAACTGCGAT+TGG 0.494692 1_1:+4309098 Msa0002410:three_prime_UTR
CAAAGTGAACAGCAAGGAAA+GGG 0.495784 1_1:+4302929 Msa0002410:CDS
TTTGCTGATCGCCTCAAAAG+TGG 0.497809 1_1:+4303904 Msa0002410:CDS
GAAAGGCATGAGTAGAGATC+TGG 0.497932 1_1:+4304584 Msa0002410:CDS
ACAACAGAGTCTGAGGATCT+TGG 0.497933 1_1:+4303472 Msa0002410:CDS
GCAGAAGCTGTTTCACAAGC+TGG 0.498442 1_1:+4304453 Msa0002410:CDS
GGTTGGAGTACCCTTGCTAC+TGG 0.498805 1_1:-4302975 None:intergenic
GGCCTTCTTGCCAAGATCCT+CGG 0.499728 1_1:-4303740 None:intergenic
GGAAAGGAATCATCTAGAAA+AGG 0.502811 1_1:+4301032 Msa0002410:CDS
GTTAAGTCCAGTTCAACAAA+AGG 0.502961 1_1:+4303277 Msa0002410:CDS
TTTGCTTAACTGCCAAATCT+GGG 0.503613 1_1:-4302910 None:intergenic
GATATATGGCTGCTGATGAC+AGG 0.504637 1_1:-4303796 None:intergenic
GATATATGGCTGCTGACGGC+AGG 0.506228 1_1:-4303538 None:intergenic
CAGTCCATGGTCCACGAAGG+GGG 0.507590 1_1:-4303192 None:intergenic
GACTTAACTGTATCTGCGAC+AGG 0.509958 1_1:-4303262 None:intergenic
AAGCCATGCTCAAAATTATC+CGG 0.510140 1_1:+4299620 Msa0002410:CDS
TTCTGCTCTTTCTGCTGCTG+CGG 0.511262 1_1:+4304005 Msa0002410:CDS
AGTCCATGGTCCACGAAGGG+GGG 0.511293 1_1:-4303191 None:intergenic
CTGATCGCCTCAAAAGTGGC+TGG 0.511814 1_1:+4303908 Msa0002410:CDS
TCCTAAGTTACCCATACCCT+CGG 0.512925 1_1:-4304265 None:intergenic
GGAAAAGACAAGGCTTCTAA+AGG 0.514826 1_1:+4307882 Msa0002410:CDS
GTCCATGGTCCACGAAGGGG+GGG 0.517299 1_1:-4303190 None:intergenic
AGAAGCCTGTGTTTCAGACT+CGG 0.517363 1_1:-4304859 None:intergenic
ATTTATCTTTCCGAGGGTAT+GGG 0.517422 1_1:+4304255 Msa0002410:CDS
GGCCTTCCAGGCTTAGAAGT+GGG 0.517477 1_1:-4308272 None:intergenic
GGTTGGGTAAGGGTGAGAAA+AGG 0.518118 1_1:+4308576 Msa0002410:CDS
ATCAACTGGAAACCAGATGA+TGG 0.518591 1_1:-4301122 None:intergenic
TTTAGTTCCAGCAACAGGAC+AGG 0.518940 1_1:-4299393 None:intergenic
GGGAGTTGGTAGACTCCAAA+GGG 0.519217 1_1:-4303029 None:intergenic
TGTTGGTTGGATCTTGCGAT+TGG 0.520223 1_1:-4308656 None:intergenic
CATCCCTTATTTGGAATGAT+GGG 0.521368 1_1:+4307669 Msa0002410:CDS
GGAATGATGTATCTAAAGAT+GGG 0.521577 1_1:+4300442 Msa0002410:CDS
AATGCTCTTGTAGCCGATGA+AGG 0.524453 1_1:+4305199 Msa0002410:CDS
TCCGAGGGTATGGGTAACTT+AGG 0.524730 1_1:+4304264 Msa0002410:CDS
GCCTGTGAATAATCCAAAGC+AGG 0.525448 1_1:-4303091 None:intergenic
ACGATTATCATAGGAAGGAT+TGG 0.526576 1_1:-4300274 None:intergenic
CGAGGTTGGTCCTGCTCCCG+TGG 0.526902 1_1:-4308459 None:intergenic
GGCATCCTATTCTGAAACCA+CGG 0.527037 1_1:+4308442 Msa0002410:CDS
GCCAAAATAGATAAAGAAGC+AGG 0.527330 1_1:+4299329 Msa0002410:CDS
TGACAGGAGTCGATAATACT+AGG 0.527596 1_1:-4303780 None:intergenic
CTTCGTGCTAAATCACCATC+AGG 0.528654 1_1:-4300954 None:intergenic
TTTGTTATTAGTTGGCAGGA+AGG 0.528821 1_1:+4307474 Msa0002410:intron
GTACTAAACAGAGGAGTAGA+TGG 0.528932 1_1:-4303640 None:intergenic
TGCGATGGGCACCGTTCAGT+TGG 0.530094 1_1:+4309080 Msa0002410:three_prime_UTR
TAAGCTTGACCAACCTTCAT+CGG 0.530996 1_1:-4305212 None:intergenic
GCGTGAAAATCAGATGGAAA+GGG 0.532499 1_1:+4308421 Msa0002410:CDS
TGGCAATGGATTTGAAAATC+GGG 0.534504 1_1:+4304890 Msa0002410:CDS
TTCAACAACCTCAGTTCAGT+GGG 0.534875 1_1:-4307930 None:intergenic
CAGCAAGTTGGGCTATTGAA+AGG 0.534914 1_1:+4304567 Msa0002410:CDS
GGAACTCCGAAAATCACTCT+TGG 0.535211 1_1:-4308056 None:intergenic
GTCCGAGGATCTTGGCAAGA+AGG 0.535661 1_1:+4303738 Msa0002410:CDS
TAATAACCATGGCTGAAAGA+AGG 0.537205 1_1:+4309054 Msa0002410:three_prime_UTR
ATGCTTCAGGATCACGTAGT+TGG 0.537310 1_1:+4308198 Msa0002410:CDS
TCCAGTTCAGAAGACCCAAC+AGG 0.537603 1_1:-4299362 None:intergenic
AAAGGAAAACCTGCACCTGC+TGG 0.539443 1_1:+4308548 Msa0002410:CDS
AGCAAGCATTATGTCGCGGA+TGG 0.539634 1_1:+4308113 Msa0002410:CDS
ACCGGCATTTGCTCCTATTG+GGG 0.539892 1_1:-4300529 None:intergenic
GATAGCATATGGGCCTCCTC+AGG 0.541073 1_1:-4302072 None:intergenic
GCAAAACCTTCTTTCAGCCA+TGG 0.541147 1_1:-4309060 None:intergenic
TTGGGTTTAGGCAGACTAGT+TGG 0.542155 1_1:+4309192 Msa0002410:three_prime_UTR
TCATTATGCACCTTGTGAAA+GGG 0.542441 1_1:-4304711 None:intergenic
GTCTGAGGATCTTGGTCAGA+AGG 0.542631 1_1:+4303480 Msa0002410:CDS
GAAATGACTTGAAGTATCCT+TGG 0.542849 1_1:-4308384 None:intergenic
CTATATTATCGGTGCTGCAA+AGG 0.542855 1_1:+4304341 Msa0002410:CDS
ACCAAGTCGCTTAACGGCAA+AGG 0.543101 1_1:-4304498 None:intergenic
AGGCGATCAGCAAAAGATAG+AGG 0.543832 1_1:-4303895 None:intergenic
TAGGAACTGCTATCGAGTGC+AGG 0.544522 1_1:-4303226 None:intergenic
ATAATAGGGAACATAGCAAT+GGG 0.544600 1_1:+4309156 Msa0002410:three_prime_UTR
TGTAGACCTAAATTAGAAGC+TGG 0.544759 1_1:-4303346 None:intergenic
TAGGTGGGACTGCAAATGAA+TGG 0.546506 1_1:-4303761 None:intergenic
ATTTGACAAGTCGTAGAGAA+AGG 0.546823 1_1:+4308360 Msa0002410:CDS
CATGGATATATGGAAACAGT+TGG 0.547154 1_1:+4304038 Msa0002410:CDS
GAAGCCTGTGTTTCAGACTC+GGG 0.547844 1_1:-4304858 None:intergenic
AGCGTGAAAATCAGATGGAA+AGG 0.549164 1_1:+4308420 Msa0002410:CDS
TGCAGCATTTGACGCAACAC+TGG 0.550051 1_1:-4304169 None:intergenic
TACCATTTGATATATTGGCA+TGG 0.550611 1_1:-4309305 None:intergenic
ACCTCACTATGTCTTTCTTG+AGG 0.550615 1_1:-4299470 None:intergenic
AGATACATGTCCAGATACAC+TGG 0.551848 1_1:-4300913 None:intergenic
TTACTTACTCTTGCTGTGGG+AGG 0.551855 1_1:-4308527 None:intergenic
GTTGGCTGCAATAACAGGAT+GGG 0.552091 1_1:-4300562 None:intergenic
TCTGCACTAGAATTAGCAAA+AGG 0.552195 1_1:+4307861 Msa0002410:CDS
GAGTACCCTTGCTACTGGCT+AGG 0.553162 1_1:-4302970 None:intergenic
GCAAAGTGAACAGCAAGGAA+AGG 0.554085 1_1:+4302928 Msa0002410:CDS
TTCTTGGGCATAATACATCT+CGG 0.554581 1_1:+4303158 Msa0002410:CDS
GCTTCTTTAACTGATGGCAA+TGG 0.555199 1_1:+4304876 Msa0002410:CDS
GTGGGCTTGAAGTCAGCTCT+GGG 0.555536 1_1:-4308254 None:intergenic
CACCCTTCAAGATGGAAGCA+GGG 0.556685 1_1:-4304296 None:intergenic
CTGGATCGTCAGTTATTGGA+AGG 0.556718 1_1:+4308854 Msa0002410:intron
TGGGAGAAGCTTAGCTCCTG+AGG 0.557058 1_1:+4300461 Msa0002410:CDS
GATGATAAAGTGTTCAATGT+TGG 0.558093 1_1:+4307963 Msa0002410:CDS
CGACTTGTCAAATCATTGGT+AGG 0.558481 1_1:-4308350 None:intergenic
ACCTAATAAGACAGCCGGAA+AGG 0.558712 1_1:+4301016 Msa0002410:CDS
AAATTAGAAGCTGGTAGACC+AGG 0.559496 1_1:-4303337 None:intergenic
CCATCATTCCAAATAAGGGA+TGG 0.559615 1_1:-4307668 None:intergenic
CAAACAAAGTACCTCATTGG+TGG 0.559868 1_1:-4307732 None:intergenic
TGGCCTTCCAGGCTTAGAAG+TGG 0.561176 1_1:-4308273 None:intergenic
TCCACTTGCACCCTTCAAGA+TGG 0.561698 1_1:-4304304 None:intergenic
TCCATCTTGAAGGGTGCAAG+TGG 0.561970 1_1:+4304303 Msa0002410:CDS
CCAAAGCAGGACCTCTTGCA+AGG 0.562367 1_1:-4303078 None:intergenic
TTATCATAGGAAGGATTGGC+AGG 0.563296 1_1:-4300270 None:intergenic
TTGCCAAATTTATCTTTCCG+AGG 0.564125 1_1:+4304248 Msa0002410:CDS
AAGGGATGGACGGAGAAGCC+AGG 0.564780 1_1:-4307654 None:intergenic
GTATCTGGACATGTATCTCA+TGG 0.565330 1_1:+4300918 Msa0002410:CDS
AAATAGTTCAAACGGATCAA+GGG 0.565614 1_1:+4304794 Msa0002410:CDS
TATAATAGGGAACATAGCAA+TGG 0.565672 1_1:+4309155 Msa0002410:three_prime_UTR
TTGATGCATGGATACAAGAA+AGG 0.566041 1_1:+4305978 Msa0002410:CDS
AGCAGTCCATGGTCCACGAA+GGG 0.566117 1_1:-4303194 None:intergenic
AACCTACCACCAGCAGGTGC+AGG 0.566263 1_1:-4308557 None:intergenic
GCTGGTGGTAGGTTGGGTAA+GGG 0.566339 1_1:+4308566 Msa0002410:CDS
CGAGCACCTAATAAGACAGC+CGG 0.567171 1_1:+4301011 Msa0002410:CDS
TGCAAGGGCACTAGATTGCA+GGG 0.567491 1_1:-4303062 None:intergenic
GAGAAGAATAATATCAAAGA+GGG 0.568345 1_1:+4304912 Msa0002410:CDS
GCTTCCCGAGTCTGAAACAC+AGG 0.568528 1_1:+4304854 Msa0002410:CDS
GAGATGACAGAGGAATAAAA+GGG 0.568653 1_1:-4303006 None:intergenic
TGCCAAATTTATCTTTCCGA+GGG 0.568678 1_1:+4304249 Msa0002410:CDS
ACACAGGCTTCTTTAACTGA+TGG 0.569237 1_1:+4304870 Msa0002410:CDS
TTACCCAACCTACCACCAGC+AGG 0.569642 1_1:-4308563 None:intergenic
TGTTGGCTGCAATAACAGGA+TGG 0.570296 1_1:-4300563 None:intergenic
TGGGACAAGTAGGATTAATG+AGG 0.571081 1_1:+4308133 Msa0002410:CDS
CAAAGAGGGCTCACATGTAG+AGG 0.571465 1_1:+4304926 Msa0002410:CDS
TTGCTGAGAAGACTCTTGGA+AGG 0.572249 1_1:-4304550 None:intergenic
AGGAGCAAATGCCGGTGAGA+GGG 0.572537 1_1:+4300536 Msa0002410:CDS
CAATCTAGTGCCCTTGCAAG+AGG 0.572916 1_1:+4303067 Msa0002410:CDS
GAAACCAGATGTACACAGAC+TGG 0.574343 1_1:+4308007 Msa0002410:CDS
TCCTGTTATTGCAGCCAACA+AGG 0.574675 1_1:+4300566 Msa0002410:CDS
CAGTTCAATACACGATGCTA+AGG 0.575535 1_1:+4308226 Msa0002410:CDS
CTACACCTGAGCGCAAAACC+AGG 0.576140 1_1:+4300988 Msa0002410:CDS
GGAGTAGAAGAAGCAGTCCA+TGG 0.577202 1_1:-4303205 None:intergenic
ACCCCTGCTTCCATCTTGAA+GGG 0.578475 1_1:+4304294 Msa0002410:CDS
TACAGTGCATAAGATGAGAC+AGG 0.578481 1_1:-4309263 None:intergenic
AAACAAAGTACCTCATTGGT+GGG 0.578841 1_1:-4307731 None:intergenic
ATCTTCTAATCATGATCACA+AGG 0.578968 1_1:+4300419 Msa0002410:CDS
TTAAGCGACTTGGTAGAAGC+TGG 0.581591 1_1:+4304507 Msa0002410:CDS
CCAAGAAAGTTTCGCAGTGG+TGG 0.582828 1_1:-4303142 None:intergenic
GAAATGGATCGAGTCTCCTA+AGG 0.583685 1_1:+4307691 Msa0002410:CDS
AGGGAATCACATGAGGGAGT+TGG 0.584021 1_1:-4303043 None:intergenic
AGGAGTTGATACTACTAGAT+GGG 0.586164 1_1:-4303518 None:intergenic
GCCCGTGAGGAATACGAGGT+TGG 0.586490 1_1:-4308473 None:intergenic
TGGATTGGCATCAGATGTTG+AGG 0.586720 1_1:+4304077 Msa0002410:CDS
ATGGATCGAGTCTCCTAAGG+TGG 0.588019 1_1:+4307694 Msa0002410:CDS
AAAAGTTACAACAGAGTCTG+AGG 0.588353 1_1:+4303465 Msa0002410:CDS
TTGGCTGCAATAACAGGATG+GGG 0.589097 1_1:-4300561 None:intergenic
TTGGTAGAAGCTGGTCCAGA+GGG 0.589682 1_1:+4304516 Msa0002410:CDS
ACCAAAAGCAGATAGCATAT+GGG 0.591590 1_1:-4302082 None:intergenic
AGCTCCTGAGGTAGATCTAG+TGG 0.592287 1_1:+4300473 Msa0002410:CDS
GCAGTCCATGGTCCACGAAG+GGG 0.592464 1_1:-4303193 None:intergenic
CCCACAGCAAGAGTAAGTAA+AGG 0.593207 1_1:+4308530 Msa0002410:CDS
TAGGAGCAAATGCCGGTGAG+AGG 0.594817 1_1:+4300535 Msa0002410:CDS
TGCATCAACTCTATCCCCAA+TGG 0.594845 1_1:-4305963 None:intergenic
TCAACTGGAAACCAGATGAT+GGG 0.595243 1_1:-4301121 None:intergenic
GGTGCATAATGAGATGTCAC+TGG 0.595327 1_1:+4304722 Msa0002410:CDS
CTGGTGAGTGTTGACAATGT+TGG 0.595391 1_1:+4304603 Msa0002410:CDS
AATATATTAAGTTTGAAGGA+CGG 0.596162 1_1:+4305157 Msa0002410:CDS
TATTATCGGTGCTGCAAAGG+AGG 0.597704 1_1:+4304344 Msa0002410:CDS
AGTTGCAGTGGCGACAGCAG+TGG 0.597987 1_1:-4303560 None:intergenic
AGCCCACTTCTAAGCCTGGA+AGG 0.598046 1_1:+4308270 Msa0002410:CDS
ATTCAACAACCTCAGTTCAG+TGG 0.599678 1_1:-4307931 None:intergenic
ATGTCGCGGATGGGACAAGT+AGG 0.600442 1_1:+4308123 Msa0002410:CDS
TTCTAAAGGTACTGATGCTG+CGG 0.600477 1_1:+4307896 Msa0002410:CDS
GGGTGAGAAAAGGCTTCGAA+TGG 0.600911 1_1:+4308586 Msa0002410:CDS
CATTCCAAATAAGGGATGGA+CGG 0.601057 1_1:-4307664 None:intergenic
GCAAGCATTATGTCGCGGAT+GGG 0.601810 1_1:+4308114 Msa0002410:CDS
AGGGAGTTGGTAGACTCCAA+AGG 0.602810 1_1:-4303030 None:intergenic
AAAGGGTGACTCCTGACCTA+CGG 0.603416 1_1:-4304694 None:intergenic
TTAGTTCCAGCAACAGGACA+GGG 0.603543 1_1:-4299392 None:intergenic
GGTTCTAGCAGAATCTCCAC+TGG 0.603800 1_1:+4300866 Msa0002410:intron
AAACGGATCAAGGGGCCACA+AGG 0.606869 1_1:+4304803 Msa0002410:CDS
TCTTGGCCTAGCCAGTAGCA+AGG 0.606887 1_1:+4302964 Msa0002410:CDS
CAAAATCGTAATACTTCTAG+GGG 0.607174 1_1:+4308941 Msa0002410:three_prime_UTR
GCATCCTATTCTGAAACCAC+GGG 0.608342 1_1:+4308443 Msa0002410:CDS
TTTGCCACTAGATCTACCTC+AGG 0.609474 1_1:-4300477 None:intergenic
ACTCTACCCAAAACGTTCTG+TGG 0.609551 1_1:-4308293 None:intergenic
GGTCCACGATTATCATAGGA+AGG 0.613290 1_1:-4300279 None:intergenic
ATTCAGAACAGGGGTTTCGG+TGG 0.613460 1_1:-4303830 None:intergenic
GCTGGAAAGATCGTTACTAT+GGG 0.613675 1_1:+4304471 Msa0002410:CDS
ATCTCTGTTAGACATTTGAG+AGG 0.614668 1_1:-4304640 None:intergenic
ACCAACCTCGTATTCCTCAC+GGG 0.615080 1_1:+4308472 Msa0002410:CDS
ACCCCAATAGGAGCAAATGC+CGG 0.615222 1_1:+4300528 Msa0002410:CDS
AATAGTTCAAACGGATCAAG+GGG 0.616318 1_1:+4304795 Msa0002410:CDS
TGCAGCCAACAAGGAATCAG+TGG 0.616794 1_1:+4300575 Msa0002410:CDS
ATCTCAGCGTGAAAATCAGA+TGG 0.617498 1_1:+4308415 Msa0002410:CDS
GACAGGAGATGCAGAAGGAT+AGG 0.618707 1_1:-4303245 None:intergenic
TGACTAAATTAGAAACCTTG+TGG 0.618872 1_1:-4304818 None:intergenic
GGAGAAGAATAATATCAAAG+AGG 0.619551 1_1:+4304911 Msa0002410:CDS
ACCCTTCAAGATGGAAGCAG+GGG 0.619583 1_1:-4304295 None:intergenic
CTTGGTAGAAGCTGGTCCAG+AGG 0.621377 1_1:+4304515 Msa0002410:CDS
GACCAACCTCGTATTCCTCA+CGG 0.621399 1_1:+4308471 Msa0002410:CDS
GGGCTTCCAAATGTAACAGA+TGG 0.622090 1_1:-4300300 None:intergenic
CAAAGCAGGACCTCTTGCAA+GGG 0.622842 1_1:-4303077 None:intergenic
AGGATGGGGAACCCTCTCAC+CGG 0.623225 1_1:-4300547 None:intergenic
TTGGTAGGAAAGTTTGACGA+AGG 0.624063 1_1:-4308335 None:intergenic
GCAAGGAATTTAAAGCAGCA+TGG 0.624851 1_1:+4305125 Msa0002410:CDS
GCGAGTCATCCAATCGCAGT+TGG 0.625483 1_1:-4309107 None:intergenic
GGAAAACCTGCACCTGCTGG+TGG 0.625648 1_1:+4308551 Msa0002410:CDS
AAATATGGATGCTATTGTGA+AGG 0.626022 1_1:+4304416 Msa0002410:CDS
GTTTAGTACAAACAATGCGA+TGG 0.627312 1_1:+4303654 Msa0002410:CDS
GATTGGATCTACGAGGCTCA+AGG 0.627493 1_1:-4308639 None:intergenic
TAACAGAGATATCTCATCTG+AGG 0.627674 1_1:+4304653 Msa0002410:CDS
CTGCAAAGGAGGCTTCAAGA+AGG 0.627684 1_1:+4304355 Msa0002410:CDS
CAGTCAAGGCGTAGTACCTG+AGG 0.628468 1_1:+4302056 Msa0002410:intron
ACCTCAAGAAAGACATAGTG+AGG 0.629003 1_1:+4299469 Msa0002410:CDS
AAGCAGTCCATGGTCCACGA+AGG 0.630274 1_1:-4303195 None:intergenic
CAGTTGGTCTTCCAACTGAA+CGG 0.631195 1_1:-4309091 None:intergenic
TTGGGGATAGAGTTGATGCA+TGG 0.631797 1_1:+4305966 Msa0002410:CDS
CTTCTAATCATGATCACAAG+GGG 0.633523 1_1:+4300421 Msa0002410:CDS
TTGCTACTGGCTAGGCCAAG+AGG 0.633863 1_1:-4302962 None:intergenic
TGCACTGCAAGCAAAACTGA+TGG 0.634037 1_1:+4304188 Msa0002410:CDS
AGTGGATATATGGCTGCTGA+CGG 0.635351 1_1:-4303542 None:intergenic
GGAAGTCCACAAATACCTGA+TGG 0.636580 1_1:+4300939 Msa0002410:CDS
AGATTGCAGGGAATCACATG+AGG 0.637696 1_1:-4303050 None:intergenic
CTGACAGGTAATAATAACCA+TGG 0.638072 1_1:+4309043 Msa0002410:intron
AAAGGTTACAACAGAGTCCG+AGG 0.639376 1_1:+4303723 Msa0002410:CDS
AACCTGCACCTGCTGGTGGT+AGG 0.639899 1_1:+4308555 Msa0002410:CDS
AGGAGTCGATAATACTAGGT+GGG 0.641092 1_1:-4303776 None:intergenic
GGAGGGTTCAGATCAGCAGT+AGG 0.641925 1_1:-4300357 None:intergenic
AATCCTTCCTATGATAATCG+TGG 0.641986 1_1:+4300276 Msa0002410:CDS
TCAGGAGTCACCCTTTCACA+AGG 0.642576 1_1:+4304701 Msa0002410:CDS
GGTAGATTATTGGTCCATTG+GGG 0.643147 1_1:+4305949 Msa0002410:CDS
TACTGGCACATTCAGAACAG+GGG 0.643294 1_1:-4303839 None:intergenic
ATGCGGAAGCAGATTGCCGT+AGG 0.644760 1_1:+4304678 Msa0002410:CDS
GGGACAAGTAGGATTAATGA+GGG 0.645282 1_1:+4308134 Msa0002410:CDS
CTTGGCCTAGCCAGTAGCAA+GGG 0.645610 1_1:+4302965 Msa0002410:CDS
ATATCTCATCTGAGGAAATG+CGG 0.646364 1_1:+4304661 Msa0002410:CDS
GTTTAATACAAACAATGCGG+TGG 0.648608 1_1:+4303396 Msa0002410:CDS
GCATTGTTTGTATTAAACAG+AGG 0.649960 1_1:-4303391 None:intergenic
GAATGTGCCAGTAACTGCTG+TGG 0.650011 1_1:+4303849 Msa0002410:CDS
TCTTCTAATCATGATCACAA+GGG 0.654929 1_1:+4300420 Msa0002410:CDS
TGGATCGAGTCTCCTAAGGT+GGG 0.656172 1_1:+4307695 Msa0002410:CDS
TCAAGGCGTAGTACCTGAGG+AGG 0.656417 1_1:+4302059 Msa0002410:CDS
ACAAGTAGGATTAATGAGGG+AGG 0.656546 1_1:+4308137 Msa0002410:CDS
TCTGCGACAGGAGATGCAGA+AGG 0.661738 1_1:-4303250 None:intergenic
TTACTGGCACATTCAGAACA+GGG 0.663972 1_1:-4303840 None:intergenic
GTGATCTGTAACTTCAAGTG+TGG 0.665182 1_1:-4299243 None:intergenic
TGCCCAAGAAAGTTTCGCAG+TGG 0.665692 1_1:-4303145 None:intergenic
TTAGAAGCTGGTAGACCAGG+TGG 0.665982 1_1:-4303334 None:intergenic
TTCAGTTGAAGATGCCCGTG+AGG 0.668139 1_1:-4308486 None:intergenic
GGAGGCAAGGATAAATGCAG+AGG 0.669188 1_1:+4303978 Msa0002410:CDS
AGGAATAAAAGGGTTTACAG+TGG 0.671232 1_1:-4302996 None:intergenic
AATGAGCTGCATGAGACTGG+AGG 0.673355 1_1:+4300243 Msa0002410:CDS
ATTAACAGCAGAAGTTGCAG+TGG 0.674022 1_1:-4303572 None:intergenic
AAATAACAGTCCCACCAATG+AGG 0.674959 1_1:+4307721 Msa0002410:CDS
CAGGAGTCGATAATACTAGG+TGG 0.675397 1_1:-4303777 None:intergenic
TAGAAGCTGGTAGACCAGGT+GGG 0.678514 1_1:-4303333 None:intergenic
GCATTGTTTGTACTAAACAG+AGG 0.678977 1_1:-4303649 None:intergenic
CAGCTAATCCCACTGAACTG+AGG 0.680160 1_1:+4307922 Msa0002410:CDS
GTACCTAATTCAGAAGCCAG+TGG 0.681401 1_1:-4300882 None:intergenic
CCAGTTGATGCAATCCAACG+AGG 0.682179 1_1:+4301136 Msa0002410:CDS
TGCTGCGGTGAATCATAGCA+TGG 0.682408 1_1:+4304020 Msa0002410:CDS
CTACGTGATCCTGAAGCATG+CGG 0.683227 1_1:-4308194 None:intergenic
AGTAAGCAAGCATTATGTCG+CGG 0.687077 1_1:+4308109 Msa0002410:CDS
CTCCAAAGGGGAGATGACAG+AGG 0.689010 1_1:-4303016 None:intergenic
AGATGCCCGTGAGGAATACG+AGG 0.690342 1_1:-4308477 None:intergenic
GTTAAGCAAAGTGAACAGCA+AGG 0.692970 1_1:+4302923 Msa0002410:CDS
ATTAGCAAAAGGAAAAGACA+AGG 0.701216 1_1:+4307872 Msa0002410:CDS
GATTGCAGGGAATCACATGA+GGG 0.702583 1_1:-4303049 None:intergenic
GATACATGTCCAGATACACT+GGG 0.713464 1_1:-4300912 None:intergenic
TGTGAATCAATAGAGAAACA+GGG 0.721962 1_1:+4299536 Msa0002410:CDS
ATCTTGCGATTGGATCTACG+AGG 0.744120 1_1:-4308646 None:intergenic
TCTGTTTAATACAAACAATG+CGG 0.746694 1_1:+4303393 Msa0002410:CDS
CAGATGTACACAGACTGGCG+AGG 0.750821 1_1:+4308012 Msa0002410:CDS
AAGTCGTAGAGAAAGGACCA+AGG 0.756202 1_1:+4308367 Msa0002410:CDS
GGAGTTGGTAGACTCCAAAG+GGG 0.769049 1_1:-4303028 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATTGATTTTTTTAGA+AGG + chr1_1:4300076-4300095 Msa0002410:intron 10.0%
!! ATATCCATATTATTAAAAAT+TGG + chr1_1:4301435-4301454 Msa0002410:intron 10.0%
!! AAACAAATAAAGTTAAAAAA+AGG - chr1_1:4301538-4301557 None:intergenic 10.0%
!! ATTATAGTTAGTAATATTAA+TGG - chr1_1:4301677-4301696 None:intergenic 10.0%
!!! AATCAATAAATTTTTAATTG+AGG + chr1_1:4305613-4305632 Msa0002410:intron 10.0%
!!! AAAAAAAATCATTGTTTTTT+AGG + chr1_1:4305800-4305819 Msa0002410:intron 10.0%
!! TTAATATTGTATTAAAAAGT+TGG + chr1_1:4306421-4306440 Msa0002410:intron 10.0%
!! TAATATTGTATTAAAAAGTT+GGG + chr1_1:4306422-4306441 Msa0002410:intron 10.0%
!!! TTTTTATTTTTTTTTGCAAA+TGG + chr1_1:4306452-4306471 Msa0002410:intron 10.0%
!! AAAAATATAGACATAATATA+TGG - chr1_1:4307425-4307444 None:intergenic 10.0%
!! AAAGTTGTATATTATATAAT+AGG + chr1_1:4309141-4309160 Msa0002410:three_prime_UTR 10.0%
!! AAGTTGTATATTATATAATA+GGG + chr1_1:4309142-4309161 Msa0002410:three_prime_UTR 10.0%
!! TATAAAATTGATCTTCTAAT+AGG - chr1_1:4300167-4300186 None:intergenic 15.0%
!!! TATTAGAAGATCAATTTTAT+AGG + chr1_1:4300166-4300185 Msa0002410:intron 15.0%
!! TAGTAAAATATAATCTGTAA+TGG + chr1_1:4300755-4300774 Msa0002410:intron 15.0%
!!! TTTTTTTCTCTTATTATTGA+AGG + chr1_1:4300845-4300864 Msa0002410:intron 15.0%
!! AAAAAAGGAAAGAAAAAAAT+GGG - chr1_1:4301523-4301542 None:intergenic 15.0%
!! AAAAAAAGGAAAGAAAAAAA+TGG - chr1_1:4301524-4301543 None:intergenic 15.0%
!! ATAATAAAAACCCATAATAA+TGG - chr1_1:4301592-4301611 None:intergenic 15.0%
!! TTTATAACAAAGAAAATCAA+AGG - chr1_1:4301626-4301645 None:intergenic 15.0%
!!! TTTTTTTTAATCAACTATGA+GGG - chr1_1:4301811-4301830 None:intergenic 15.0%
!! TCATAGTTGATTAAAAAAAA+GGG + chr1_1:4301811-4301830 Msa0002410:intron 15.0%
!!! TTTGTTTTTTTGTTTTTGAA+TGG + chr1_1:4305388-4305407 Msa0002410:intron 15.0%
!!! TAAATTAAGCATTTTGAATA+TGG + chr1_1:4305645-4305664 Msa0002410:intron 15.0%
!! TAAAGTAGAATATATTGAAT+TGG + chr1_1:4306351-4306370 Msa0002410:intron 15.0%
!! AAAGTAGAATATATTGAATT+GGG + chr1_1:4306352-4306371 Msa0002410:intron 15.0%
!! GTATTAATTAGAGTTATAAT+TGG + chr1_1:4306388-4306407 Msa0002410:intron 15.0%
!! AAAAAAAAAAGGAAACAAAT+TGG - chr1_1:4306627-4306646 None:intergenic 15.0%
!! ATATGAAAGGAAAAAAAAAA+AGG - chr1_1:4306638-4306657 None:intergenic 15.0%
!!! CAATAAAAGATCTTATTTAT+TGG - chr1_1:4306886-4306905 None:intergenic 15.0%
!! AACAAAAATAACTAAATTTG+AGG - chr1_1:4307460-4307479 None:intergenic 15.0%
!!! TAGTTATTTTTGTTATTAGT+TGG + chr1_1:4307466-4307485 Msa0002410:intron 15.0%
!!! TAATTTTAAATTATGCTGTT+TGG + chr1_1:4307575-4307594 Msa0002410:intron 15.0%
!!! AGTTACTGTTTCTTTTATTA+AGG + chr1_1:4299565-4299584 Msa0002410:CDS 20.0%
!!! TTCTTTTATTAAGGATGATA+AGG + chr1_1:4299574-4299593 Msa0002410:CDS 20.0%
!!! GAGAATATATTTAAGATTAC+CGG - chr1_1:4299642-4299661 None:intergenic 20.0%
!!! GATTTTTTTAGAAGGTAAAT+TGG + chr1_1:4300084-4300103 Msa0002410:intron 20.0%
!!! ATAATCTGTAATTTTCCTTA+TGG + chr1_1:4300802-4300821 Msa0002410:intron 20.0%
!! TAATAATATGGATATAAGTG+TGG - chr1_1:4301430-4301449 None:intergenic 20.0%
!! CATATTATTAAAAATTGGAC+CGG + chr1_1:4301440-4301459 Msa0002410:intron 20.0%
!! AAAAAGGAAAGAAAAAAATG+GGG - chr1_1:4301522-4301541 None:intergenic 20.0%
!! AAAGAAAATCAAAGGTAAAA+GGG - chr1_1:4301618-4301637 None:intergenic 20.0%
!!! CTTTTTTTTAATCAACTATG+AGG - chr1_1:4301812-4301831 None:intergenic 20.0%
!! CTCATAGTTGATTAAAAAAA+AGG + chr1_1:4301810-4301829 Msa0002410:intron 20.0%
!! GATAAAAATCATTAGAAGTT+GGG - chr1_1:4301911-4301930 None:intergenic 20.0%
!! AGATAAAAATCATTAGAAGT+TGG - chr1_1:4301912-4301931 None:intergenic 20.0%
!!! AAAGAGATAATGATTTTGAA+GGG - chr1_1:4302124-4302143 None:intergenic 20.0%
!!! TGTAACTTTTTTCCTTTTTT+TGG - chr1_1:4303455-4303474 None:intergenic 20.0%
!! ATCAATGAAAATAGTTCAAA+CGG + chr1_1:4304786-4304805 Msa0002410:CDS 20.0%
!! TAACTAAATCACTAAAAGAA+AGG - chr1_1:4304971-4304990 None:intergenic 20.0%
!! AATATATTAAGTTTGAAGGA+CGG + chr1_1:4305157-4305176 Msa0002410:CDS 20.0%
!! AAAAACAAAAACTATTCTAG+AGG - chr1_1:4305377-4305396 None:intergenic 20.0%
!! ATATATGTGAAATGAACAAA+AGG - chr1_1:4306248-4306267 None:intergenic 20.0%
!! TAGTTACTTCTTTATATGAA+AGG - chr1_1:4306651-4306670 None:intergenic 20.0%
!!! TATAGAATATTTTGTTGCTA+TGG + chr1_1:4306704-4306723 Msa0002410:intron 20.0%
!!! ATAGAATATTTTGTTGCTAT+GGG + chr1_1:4306705-4306724 Msa0002410:intron 20.0%
!!! ATGAATTTTTATTGCAATGA+TGG + chr1_1:4306787-4306806 Msa0002410:intron 20.0%
!! GAGTATATCACTATTATAAA+AGG - chr1_1:4307403-4307422 None:intergenic 20.0%
!! TTGGAAATTCATAATCTATT+TGG + chr1_1:4307594-4307613 Msa0002410:intron 20.0%
!! TATGTTACCATTTGATATAT+TGG - chr1_1:4309313-4309332 None:intergenic 20.0%
! ATTACTGCTACTAAAAAGAT+TGG + chr1_1:4299443-4299462 Msa0002410:CDS 25.0%
!! TTTTATTAAGGATGATAAGG+AGG + chr1_1:4299577-4299596 Msa0002410:CDS 25.0%
! TCTAACATAACATTCAAGAA+TGG - chr1_1:4299763-4299782 None:intergenic 25.0%
! AAAAAAGTAGACAATTGATC+AGG - chr1_1:4299868-4299887 None:intergenic 25.0%
! AATTATACCAACATAAGATG+GGG - chr1_1:4300019-4300038 None:intergenic 25.0%
! CAATTATACCAACATAAGAT+GGG - chr1_1:4300020-4300039 None:intergenic 25.0%
! ACAATTATACCAACATAAGA+TGG - chr1_1:4300021-4300040 None:intergenic 25.0%
! AATTGATCTTCTAATAGGTA+TGG - chr1_1:4300162-4300181 None:intergenic 25.0%
!! TAGAAGATCAATTTTATAGG+TGG + chr1_1:4300169-4300188 Msa0002410:intron 25.0%
! ATCTTAATGAACTCAAAAAC+TGG - chr1_1:4300381-4300400 None:intergenic 25.0%
!!! AGTTTTTGAGTTCATTAAGA+TGG + chr1_1:4300380-4300399 Msa0002410:CDS 25.0%
!! AATCAATTTTCCCATAATAC+TGG - chr1_1:4301166-4301185 None:intergenic 25.0%
!! CGGTCCAATTTTTAATAATA+TGG - chr1_1:4301442-4301461 None:intergenic 25.0%
! TGGTTCTTAGAACAATAAAA+GGG + chr1_1:4301478-4301497 Msa0002410:intron 25.0%
! AAAAGGAAAGAAAAAAATGG+GGG - chr1_1:4301521-4301540 None:intergenic 25.0%
! AGTGATAAAAGCCATTATTA+TGG + chr1_1:4301578-4301597 Msa0002410:intron 25.0%
! GTGATAAAAGCCATTATTAT+GGG + chr1_1:4301579-4301598 Msa0002410:intron 25.0%
! CAAAGAAAATCAAAGGTAAA+AGG - chr1_1:4301619-4301638 None:intergenic 25.0%
!! ACAAAGATTTAAAATTGCAC+TGG - chr1_1:4301770-4301789 None:intergenic 25.0%
!!! AAGAGATAATGATTTTGAAG+GGG - chr1_1:4302123-4302142 None:intergenic 25.0%
!! CAAAGAGATAATGATTTTGA+AGG - chr1_1:4302125-4302144 None:intergenic 25.0%
! AAATAAGAAAGAGAGAAAGA+GGG + chr1_1:4302199-4302218 Msa0002410:intron 25.0%
!! TTTGGTTTAAAAGAGAGATT+AGG + chr1_1:4302259-4302278 Msa0002410:intron 25.0%
! AGTAAATTTCAGATAGTGTT+TGG - chr1_1:4302566-4302585 None:intergenic 25.0%
!! CATCTGAAAACACAATTTTT+AGG - chr1_1:4302680-4302699 None:intergenic 25.0%
!! CTAAAAATTGTGTTTTCAGA+TGG + chr1_1:4302678-4302697 Msa0002410:intron 25.0%
!!! ACATTTTTTATGCTAGAAGA+AGG - chr1_1:4303313-4303332 None:intergenic 25.0%
! TCTGTTTAATACAAACAATG+CGG + chr1_1:4303393-4303412 Msa0002410:CDS 25.0%
!!! TTTTTCCTTTTTTTGGACTT+CGG - chr1_1:4303448-4303467 None:intergenic 25.0%
!!! TTTTTCCTTTTTTTGGACTT+TGG - chr1_1:4303448-4303467 None:intergenic 25.0%
! AAAGTCCAAAAAAAGGAAAA+AGG + chr1_1:4303705-4303724 Msa0002410:CDS 25.0%
!! TGTAACCTTTTTCCTTTTTT+TGG - chr1_1:4303713-4303732 None:intergenic 25.0%
!!! AATAGCTCTAGCTATATTAT+CGG + chr1_1:4304330-4304349 Msa0002410:CDS 25.0%
! GAGAAGAATAATATCAAAGA+GGG + chr1_1:4304912-4304931 Msa0002410:CDS 25.0%
! ACATGTAACAATAAAATCTG+TGG - chr1_1:4305012-4305031 None:intergenic 25.0%
! AGCCAATATATTAAGTTTGA+AGG + chr1_1:4305153-4305172 Msa0002410:CDS 25.0%
! GTCCTTCAAACTTAATATAT+TGG - chr1_1:4305158-4305177 None:intergenic 25.0%
!! TTACCAGTTTTCATAATGAA+GGG + chr1_1:4305900-4305919 Msa0002410:intron 25.0%
! TCTTACATATAAGAGAAAGT+TGG + chr1_1:4306120-4306139 Msa0002410:intron 25.0%
! CTTACATATAAGAGAAAGTT+GGG + chr1_1:4306121-4306140 Msa0002410:intron 25.0%
!!! TCAACAAAAGTTGATGTATA+TGG + chr1_1:4306144-4306163 Msa0002410:intron 25.0%
!!! GTATGAAGTTTTGTTTGAAA+AGG + chr1_1:4306518-4306537 Msa0002410:intron 25.0%
! ACTTTAATCCAACATATACA+TGG + chr1_1:4306588-4306607 Msa0002410:intron 25.0%
! CCAATCAAGAAATTTACAAT+GGG + chr1_1:4306762-4306781 Msa0002410:intron 25.0%
! CAATCAAGAAATTTACAATG+GGG + chr1_1:4306763-4306782 Msa0002410:intron 25.0%
! TCTAATATATACAGAAAGGT+GGG - chr1_1:4306863-4306882 None:intergenic 25.0%
! TTGGTCTAATATATACAGAA+AGG - chr1_1:4306867-4306886 None:intergenic 25.0%
! TAAAACAAAAGCCAATAACT+AGG - chr1_1:4306977-4306996 None:intergenic 25.0%
! TCTGCATAAATTTGTAGAAT+AGG + chr1_1:4307210-4307229 Msa0002410:intron 25.0%
! CTGCATAAATTTGTAGAATA+GGG + chr1_1:4307211-4307230 Msa0002410:intron 25.0%
!!! AATGAGAGTTCTTACTTTTT+TGG + chr1_1:4307242-4307261 Msa0002410:intron 25.0%
!!! ATGAGAGTTCTTACTTTTTT+GGG + chr1_1:4307243-4307262 Msa0002410:intron 25.0%
! GGATCATCAAAATTATAATG+TGG - chr1_1:4307314-4307333 None:intergenic 25.0%
! AAAAAATTGATGTGAGACAT+AGG - chr1_1:4307335-4307354 None:intergenic 25.0%
!!! TATTTTTGTTATTAGTTGGC+AGG + chr1_1:4307470-4307489 Msa0002410:intron 25.0%
! ATTGGATAACTTATATACCT+GGG - chr1_1:4307551-4307570 None:intergenic 25.0%
! TATTGGATAACTTATATACC+TGG - chr1_1:4307552-4307571 None:intergenic 25.0%
!! ATAAATTTTGTATTCTTCCC+CGG - chr1_1:4308086-4308105 None:intergenic 25.0%
! TAACTGAAATCAATTGTTCT+AGG + chr1_1:4308704-4308723 Msa0002410:intron 25.0%
! ACCTGCTTCTTTATCTATTT+TGG - chr1_1:4299333-4299352 None:intergenic 30.0%
AGCAGTAATATGCAGATTAT+CGG - chr1_1:4299432-4299451 None:intergenic 30.0%
ATGTGAATCAATAGAGAAAC+AGG + chr1_1:4299535-4299554 Msa0002410:CDS 30.0%
TGTGAATCAATAGAGAAACA+GGG + chr1_1:4299536-4299555 Msa0002410:CDS 30.0%
AACAATGTGTTCCTAGAAAA+GGG - chr1_1:4299731-4299750 None:intergenic 30.0%
TAACAATGTGTTCCTAGAAA+AGG - chr1_1:4299732-4299751 None:intergenic 30.0%
AATGAATGTTACAGAAGAAC+AGG - chr1_1:4300131-4300150 None:intergenic 30.0%
!! TGGTTTTTGTTTGCAAATGA+AGG + chr1_1:4300189-4300208 Msa0002410:intron 30.0%
ATGCAGCTCATTATGAAAAT+CGG - chr1_1:4300235-4300254 None:intergenic 30.0%
!!! CACACTTTTTAGTTTCATGA+GGG - chr1_1:4300323-4300342 None:intergenic 30.0%
! CTCATGAAACTAAAAAGTGT+GGG + chr1_1:4300322-4300341 Msa0002410:CDS 30.0%
TAATGAACTCAAAAACTGGA+GGG - chr1_1:4300377-4300396 None:intergenic 30.0%
TTAATGAACTCAAAAACTGG+AGG - chr1_1:4300378-4300397 None:intergenic 30.0%
ATCTTCTAATCATGATCACA+AGG + chr1_1:4300419-4300438 Msa0002410:CDS 30.0%
TCTTCTAATCATGATCACAA+GGG + chr1_1:4300420-4300439 Msa0002410:CDS 30.0%
GGAATGATGTATCTAAAGAT+GGG + chr1_1:4300442-4300461 Msa0002410:CDS 30.0%
ATTACAAATTTGACCCCAAT+AGG + chr1_1:4300516-4300535 Msa0002410:CDS 30.0%
TGAGAGAATGACATTCATAT+AGG - chr1_1:4300641-4300660 None:intergenic 30.0%
GTTAAGAGGGAAACTAATTT+AGG - chr1_1:4300709-4300728 None:intergenic 30.0%
AAATAAGTCAACACTCCATA+AGG - chr1_1:4300820-4300839 None:intergenic 30.0%
! TTTTCTAGATGATTCCTTTC+CGG - chr1_1:4301033-4301052 None:intergenic 30.0%
! TTTGTTTCAACAGCCTTTTA+TGG + chr1_1:4301241-4301260 Msa0002410:CDS 30.0%
! CTGGTTCTTAGAACAATAAA+AGG + chr1_1:4301477-4301496 Msa0002410:intron 30.0%
AAATCATTAGAAGTTGGGAA+CGG - chr1_1:4301906-4301925 None:intergenic 30.0%
TACAGACATGATTAATGCTT+TGG - chr1_1:4301939-4301958 None:intergenic 30.0%
! ATGTCTGTATCTTTGAGAAA+GGG + chr1_1:4301950-4301969 Msa0002410:intron 30.0%
! ACAAAGTTTTACAGTGTGTT+TGG + chr1_1:4302168-4302187 Msa0002410:intron 30.0%
GAAATAAGAAAGAGAGAAAG+AGG + chr1_1:4302198-4302217 Msa0002410:intron 30.0%
AATAAGAAAGAGAGAAAGAG+GGG + chr1_1:4302200-4302219 Msa0002410:intron 30.0%
TTAAACCAAACACAAGAGAT+TGG - chr1_1:4302249-4302268 None:intergenic 30.0%
TTAGGAAGAGAGACAATATT+AGG + chr1_1:4302277-4302296 Msa0002410:intron 30.0%
!!! TATATCCACTTTTTTGTGTG+AGG + chr1_1:4302473-4302492 Msa0002410:intron 30.0%
AATATCCTCACACAAAAAAG+TGG - chr1_1:4302481-4302500 None:intergenic 30.0%
TTTGGTTGTGAGAAGAAAAT+GGG - chr1_1:4302643-4302662 None:intergenic 30.0%
!! CACAATTTTTAGGAGCTTAA+GGG - chr1_1:4302670-4302689 None:intergenic 30.0%
!! ACACAATTTTTAGGAGCTTA+AGG - chr1_1:4302671-4302690 None:intergenic 30.0%
! AAAATTGTGTTTTCAGATGG+TGG + chr1_1:4302681-4302700 Msa0002410:intron 30.0%
CACGTGTATCATAAATATAC+CGG - chr1_1:4302805-4302824 None:intergenic 30.0%
GCATTGTTTGTATTAAACAG+AGG - chr1_1:4303394-4303413 None:intergenic 30.0%
!! GATTTTTCAACAGTAGTTAC+TGG - chr1_1:4303601-4303620 None:intergenic 30.0%
!! TGGCAAAAGCATTAGATATA+TGG - chr1_1:4303813-4303832 None:intergenic 30.0%
TGAATCATAGCATGGATATA+TGG + chr1_1:4304028-4304047 Msa0002410:CDS 30.0%
TTGGACAAGCAAAAAAATTC+TGG + chr1_1:4304057-4304076 Msa0002410:CDS 30.0%
CAAGCAAAAAAATTCTGGAT+TGG + chr1_1:4304062-4304081 Msa0002410:CDS 30.0%
GATAATATAGCTAGAGCTAT+TGG - chr1_1:4304331-4304350 None:intergenic 30.0%
AAATATGGATGCTATTGTGA+AGG + chr1_1:4304416-4304435 Msa0002410:CDS 30.0%
TGTCATCAATTGATCTCATA+TGG - chr1_1:4304749-4304768 None:intergenic 30.0%
AAAATAGTTCAAACGGATCA+AGG + chr1_1:4304793-4304812 Msa0002410:CDS 30.0%
AAATAGTTCAAACGGATCAA+GGG + chr1_1:4304794-4304813 Msa0002410:CDS 30.0%
TGACTAAATTAGAAACCTTG+TGG - chr1_1:4304821-4304840 None:intergenic 30.0%
! ATGGCAATGGATTTGAAAAT+CGG + chr1_1:4304889-4304908 Msa0002410:CDS 30.0%
GGAGAAGAATAATATCAAAG+AGG + chr1_1:4304911-4304930 Msa0002410:CDS 30.0%
AGAATGCTTAATGAAAACCA+GGG - chr1_1:4305063-4305082 None:intergenic 30.0%
AAGAATGCTTAATGAAAACC+AGG - chr1_1:4305064-4305083 None:intergenic 30.0%
! TGGTTTTCATTAAGCATTCT+TGG + chr1_1:4305063-4305082 Msa0002410:intron 30.0%
! AACTATGTAGTTTGTCTCAT+TGG - chr1_1:4305286-4305305 None:intergenic 30.0%
TTAATATTTACTCCCTTGTC+TGG + chr1_1:4305436-4305455 Msa0002410:intron 30.0%
TAATATTTACTCCCTTGTCT+GGG + chr1_1:4305437-4305456 Msa0002410:intron 30.0%
! ACTCTTTGACATTTTTCTGA+AGG + chr1_1:4305574-4305593 Msa0002410:intron 30.0%
TATATAATTGTCCAATGCAG+TGG + chr1_1:4305755-4305774 Msa0002410:intron 30.0%
ATATAATTGTCCAATGCAGT+GGG + chr1_1:4305756-4305775 Msa0002410:intron 30.0%
TTCTTATTCACAACGAAAGA+GGG - chr1_1:4305782-4305801 None:intergenic 30.0%
TTTCTTATTCACAACGAAAG+AGG - chr1_1:4305783-4305802 None:intergenic 30.0%
!!! AATCATTGTTTTTTAGGTGC+AGG + chr1_1:4305806-4305825 Msa0002410:intron 30.0%
!!! ATCATTGTTTTTTAGGTGCA+GGG + chr1_1:4305807-4305826 Msa0002410:intron 30.0%
! CTTACCAGTTTTCATAATGA+AGG + chr1_1:4305899-4305918 Msa0002410:intron 30.0%
! TTTTGATGAATGACTGAGAT+AGG + chr1_1:4306050-4306069 Msa0002410:intron 30.0%
TAGGAACTGATGCTTATATA+TGG + chr1_1:4306069-4306088 Msa0002410:intron 30.0%
AGGAACTGATGCTTATATAT+GGG + chr1_1:4306070-4306089 Msa0002410:intron 30.0%
GATGCTTATATATGGGTATT+TGG + chr1_1:4306077-4306096 Msa0002410:intron 30.0%
CTTTCTCTTATATGTAAGAC+CGG - chr1_1:4306119-4306138 None:intergenic 30.0%
! GATGTATCTGGTTCAAAATT+TGG - chr1_1:4306171-4306190 None:intergenic 30.0%
!! TCAACTTAAGTTGATGTATC+TGG - chr1_1:4306183-4306202 None:intergenic 30.0%
ACAAAAGGCTCACTTATAAT+GGG - chr1_1:4306233-4306252 None:intergenic 30.0%
AACAAAAGGCTCACTTATAA+TGG - chr1_1:4306234-4306253 None:intergenic 30.0%
AAGTGAAAGAGAGAGAAAAA+TGG + chr1_1:4306282-4306301 Msa0002410:intron 30.0%
AATCACTTCCATGTATATGT+TGG - chr1_1:4306599-4306618 None:intergenic 30.0%
TTGCTATGGGTAAACTTTAT+GGG + chr1_1:4306718-4306737 Msa0002410:intron 30.0%
GCCAATCAAGAAATTTACAA+TGG + chr1_1:4306761-4306780 Msa0002410:intron 30.0%
CCCATTGTAAATTTCTTGAT+TGG - chr1_1:4306765-4306784 None:intergenic 30.0%
GTCTAATATATACAGAAAGG+TGG - chr1_1:4306864-4306883 None:intergenic 30.0%
CAATTTCGTTATCATAGCTT+TGG + chr1_1:4307144-4307163 Msa0002410:intron 30.0%
!!! GTTCTTACTTTTTTGGGTTT+AGG + chr1_1:4307249-4307268 Msa0002410:intron 30.0%
! TAAAAGGAAGTACACGATAA+AGG - chr1_1:4307387-4307406 None:intergenic 30.0%
TTTCCCATCATTCCAAATAA+GGG - chr1_1:4307675-4307694 None:intergenic 30.0%
ATTTCCCATCATTCCAAATA+AGG - chr1_1:4307676-4307695 None:intergenic 30.0%
! TTATTTGGAATGATGGGAAA+TGG + chr1_1:4307675-4307694 Msa0002410:CDS 30.0%
! TTACAAACAAAGTACCTCAT+TGG - chr1_1:4307738-4307757 None:intergenic 30.0%
AGTGCAGAATTACCTAATTT+AGG - chr1_1:4307849-4307868 None:intergenic 30.0%
ATTAGCAAAAGGAAAAGACA+AGG + chr1_1:4307872-4307891 Msa0002410:CDS 30.0%
! GATGATAAAGTGTTCAATGT+TGG + chr1_1:4307963-4307982 Msa0002410:CDS 30.0%
GGGGAAGAATACAAAATTTA+TGG + chr1_1:4308085-4308104 Msa0002410:CDS 30.0%
AACATCAGGCTTAAAACAAA+TGG - chr1_1:4308827-4308846 None:intergenic 30.0%
ACCAAAATCGTAATACTTCT+AGG + chr1_1:4308939-4308958 Msa0002410:three_prime_UTR 30.0%
CCAAAATCGTAATACTTCTA+GGG + chr1_1:4308940-4308959 Msa0002410:three_prime_UTR 30.0%
CAAAATCGTAATACTTCTAG+GGG + chr1_1:4308941-4308960 Msa0002410:three_prime_UTR 30.0%
CGATCATTAAGTTAAAATCC+TGG - chr1_1:4309020-4309039 None:intergenic 30.0%
TATAATAGGGAACATAGCAA+TGG + chr1_1:4309155-4309174 Msa0002410:three_prime_UTR 30.0%
ATAATAGGGAACATAGCAAT+GGG + chr1_1:4309156-4309175 Msa0002410:three_prime_UTR 30.0%
ATCCATGCCAATATATCAAA+TGG + chr1_1:4309303-4309322 Msa0002410:three_prime_UTR 30.0%
TACCATTTGATATATTGGCA+TGG - chr1_1:4309308-4309327 None:intergenic 30.0%
GCCAAAATAGATAAAGAAGC+AGG + chr1_1:4299329-4299348 Msa0002410:CDS 35.0%
GTGCACAAAAGATTCTAGTA+TGG + chr1_1:4299502-4299521 Msa0002410:CDS 35.0%
AAGCCATGCTCAAAATTATC+CGG + chr1_1:4299620-4299639 Msa0002410:CDS 35.0%
! TTACCGGATAATTTTGAGCA+TGG - chr1_1:4299626-4299645 None:intergenic 35.0%
CATCTACGAAATCACAAGAA+TGG - chr1_1:4299667-4299686 None:intergenic 35.0%
! TAAGCATGCCACCTTATTTA+TGG + chr1_1:4299801-4299820 Msa0002410:intron 35.0%
CTATGCAGAGACCATAAATA+AGG - chr1_1:4299815-4299834 None:intergenic 35.0%
! TCCATATAGCATTGAACTTC+TGG + chr1_1:4299936-4299955 Msa0002410:intron 35.0%
ACCAGAAGTTCAATGCTATA+TGG - chr1_1:4299940-4299959 None:intergenic 35.0%
! TATAGCATTGAACTTCTGGT+TGG + chr1_1:4299940-4299959 Msa0002410:intron 35.0%
! TCTAAAACAGGAGGACAAAT+TGG - chr1_1:4299992-4300011 None:intergenic 35.0%
TGCAGCTCATTATGAAAATC+GGG - chr1_1:4300234-4300253 None:intergenic 35.0%
ACGATTATCATAGGAAGGAT+TGG - chr1_1:4300277-4300296 None:intergenic 35.0%
AATCCTTCCTATGATAATCG+TGG + chr1_1:4300276-4300295 Msa0002410:CDS 35.0%
!!! CCACACTTTTTAGTTTCATG+AGG - chr1_1:4300324-4300343 None:intergenic 35.0%
CCTCATGAAACTAAAAAGTG+TGG + chr1_1:4300321-4300340 Msa0002410:CDS 35.0%
CTTCTAATCATGATCACAAG+GGG + chr1_1:4300421-4300440 Msa0002410:CDS 35.0%
GGGAATGATGTATCTAAAGA+TGG + chr1_1:4300441-4300460 Msa0002410:CDS 35.0%
!! AATTACCACTGATTCCTTGT+TGG - chr1_1:4300583-4300602 None:intergenic 35.0%
AAATCACCATCAGGTATTTG+TGG - chr1_1:4300948-4300967 None:intergenic 35.0%
GGAAAGGAATCATCTAGAAA+AGG + chr1_1:4301032-4301051 Msa0002410:CDS 35.0%
AAGAAAAAACTCCAGCAAGA+CGG + chr1_1:4301060-4301079 Msa0002410:CDS 35.0%
! GAAGTGTTCAAATCTGGAAA+TGG - chr1_1:4301203-4301222 None:intergenic 35.0%
! ACTTGCTGAACATCCATAAA+AGG - chr1_1:4301257-4301276 None:intergenic 35.0%
ATATGGATATAAGTGTGGAG+TGG - chr1_1:4301425-4301444 None:intergenic 35.0%
TATTAAAAATTGGACCGGAC+TGG + chr1_1:4301445-4301464 Msa0002410:intron 35.0%
TGAATGCTCTCAGTTCAATT+TGG + chr1_1:4301853-4301872 Msa0002410:intron 35.0%
AACGGCATAGAATATGTCTA+AGG - chr1_1:4301888-4301907 None:intergenic 35.0%
! CATGTCTGTATCTTTGAGAA+AGG + chr1_1:4301949-4301968 Msa0002410:intron 35.0%
!!! TTTGAGAAAGGGTTTTGTTC+AGG + chr1_1:4301961-4301980 Msa0002410:intron 35.0%
! ATTATCATACCGGAGAGTAT+AGG - chr1_1:4302000-4302019 None:intergenic 35.0%
AGCACAGTTGATTATCATAC+CGG - chr1_1:4302010-4302029 None:intergenic 35.0%
TATTGATGTTGTTGCAGTCA+AGG + chr1_1:4302042-4302061 Msa0002410:intron 35.0%
ACCAAAAGCAGATAGCATAT+GGG - chr1_1:4302085-4302104 None:intergenic 35.0%
! AAGTTTTACAGTGTGTTTGG+TGG + chr1_1:4302171-4302190 Msa0002410:intron 35.0%
GAAGAGAGACAATATTAGGT+GGG + chr1_1:4302281-4302300 Msa0002410:intron 35.0%
! TTCTTTTCCATATTTCTCCC+TGG + chr1_1:4302368-4302387 Msa0002410:intron 35.0%
ATCAAAACCAGGGAGAAATA+TGG - chr1_1:4302378-4302397 None:intergenic 35.0%
GTTTGGTTGTGAGAAGAAAA+TGG - chr1_1:4302644-4302663 None:intergenic 35.0%
! AGTGGTGTTTCTGAGTTAAT+TGG - chr1_1:4302771-4302790 None:intergenic 35.0%
TAGTTACAAAATGAACGCAG+AGG - chr1_1:4302859-4302878 None:intergenic 35.0%
TTTGCTTAACTGCCAAATCT+GGG - chr1_1:4302913-4302932 None:intergenic 35.0%
ATAAAAGGGTTTACAGTGGT+TGG - chr1_1:4302995-4303014 None:intergenic 35.0%
AGGAATAAAAGGGTTTACAG+TGG - chr1_1:4302999-4303018 None:intergenic 35.0%
GAGATGACAGAGGAATAAAA+GGG - chr1_1:4303009-4303028 None:intergenic 35.0%
TTCTTGGGCATAATACATCT+CGG + chr1_1:4303158-4303177 Msa0002410:CDS 35.0%
GTTAAGTCCAGTTCAACAAA+AGG + chr1_1:4303277-4303296 Msa0002410:CDS 35.0%
! AGAAGTTCCTTTTGTTGAAC+TGG - chr1_1:4303287-4303306 None:intergenic 35.0%
TGTAGACCTAAATTAGAAGC+TGG - chr1_1:4303349-4303368 None:intergenic 35.0%
GTATTAAACAGAGGAGTAGT+TGG - chr1_1:4303385-4303404 None:intergenic 35.0%
GTTTAATACAAACAATGCGG+TGG + chr1_1:4303396-4303415 Msa0002410:CDS 35.0%
AAAAGTTACAACAGAGTCTG+AGG + chr1_1:4303465-4303484 Msa0002410:CDS 35.0%
!! AGGAGTTGATACTACTAGAT+GGG - chr1_1:4303521-4303540 None:intergenic 35.0%
GCATTGTTTGTACTAAACAG+AGG - chr1_1:4303652-4303671 None:intergenic 35.0%
GTTTAGTACAAACAATGCGA+TGG + chr1_1:4303654-4303673 Msa0002410:CDS 35.0%
CTGATCCAAAGTCCAAAAAA+AGG + chr1_1:4303698-4303717 Msa0002410:CDS 35.0%
CGAGTCTCTTACAAAAATTG+AGG + chr1_1:4303957-4303976 Msa0002410:CDS 35.0%
GTCTCTTACAAAAATTGAGG+AGG + chr1_1:4303960-4303979 Msa0002410:CDS 35.0%
TTACAAAAATTGAGGAGGCA+AGG + chr1_1:4303965-4303984 Msa0002410:CDS 35.0%
CATGGATATATGGAAACAGT+TGG + chr1_1:4304038-4304057 Msa0002410:CDS 35.0%
TTGCCAAATTTATCTTTCCG+AGG + chr1_1:4304248-4304267 Msa0002410:CDS 35.0%
TGCCAAATTTATCTTTCCGA+GGG + chr1_1:4304249-4304268 Msa0002410:CDS 35.0%
TACCCTCGGAAAGATAAATT+TGG - chr1_1:4304254-4304273 None:intergenic 35.0%
AATTTATCTTTCCGAGGGTA+TGG + chr1_1:4304254-4304273 Msa0002410:CDS 35.0%
! ATTTATCTTTCCGAGGGTAT+GGG + chr1_1:4304255-4304274 Msa0002410:CDS 35.0%
! CATATTTTCAGCTCGTTTTC+TGG - chr1_1:4304403-4304422 None:intergenic 35.0%
CAGAAAACGAGCTGAAAATA+TGG + chr1_1:4304401-4304420 Msa0002410:CDS 35.0%
TTAGACATTTGAGAGGTTTC+TGG - chr1_1:4304636-4304655 None:intergenic 35.0%
ATCTCTGTTAGACATTTGAG+AGG - chr1_1:4304643-4304662 None:intergenic 35.0%
TAACAGAGATATCTCATCTG+AGG + chr1_1:4304653-4304672 Msa0002410:CDS 35.0%
ATATCTCATCTGAGGAAATG+CGG + chr1_1:4304661-4304680 Msa0002410:CDS 35.0%
TCATTATGCACCTTGTGAAA+GGG - chr1_1:4304714-4304733 None:intergenic 35.0%
AATAGTTCAAACGGATCAAG+GGG + chr1_1:4304795-4304814 Msa0002410:CDS 35.0%
! TGGCAATGGATTTGAAAATC+GGG + chr1_1:4304890-4304909 Msa0002410:CDS 35.0%
!! GTGCATCAGGTTTTTAAAGA+TGG + chr1_1:4305103-4305122 Msa0002410:intron 35.0%
!! TCAGGTTTTTAAAGATGGCA+AGG + chr1_1:4305108-4305127 Msa0002410:intron 35.0%
TCAATATCTGCAAGAGTCAA+CGG + chr1_1:4305323-4305342 Msa0002410:intron 35.0%
GTGTACACAGCTAATAGATA+AGG + chr1_1:4305544-4305563 Msa0002410:intron 35.0%
!! CTTTGACATTTTTCTGAAGG+TGG + chr1_1:4305577-4305596 Msa0002410:intron 35.0%
AGTGAAACCCATTCCTTTAA+AGG - chr1_1:4305833-4305852 None:intergenic 35.0%
TGTCCCTTCATTATGAAAAC+TGG - chr1_1:4305906-4305925 None:intergenic 35.0%
! GTTTTCATAATGAAGGGACA+AGG + chr1_1:4305906-4305925 Msa0002410:intron 35.0%
TAATCTACCATATCTGGTCT+TGG - chr1_1:4305938-4305957 None:intergenic 35.0%
GACCAGATATGGTAGATTAT+TGG + chr1_1:4305939-4305958 Msa0002410:CDS 35.0%
GACCAATAATCTACCATATC+TGG - chr1_1:4305944-4305963 None:intergenic 35.0%
ATGGTAGATTATTGGTCCAT+TGG + chr1_1:4305947-4305966 Msa0002410:CDS 35.0%
TGGTAGATTATTGGTCCATT+GGG + chr1_1:4305948-4305967 Msa0002410:CDS 35.0%
TTGATGCATGGATACAAGAA+AGG + chr1_1:4305978-4305997 Msa0002410:CDS 35.0%
TGGTTATATACTACTCTCTC+CGG + chr1_1:4306097-4306116 Msa0002410:intron 35.0%
! AGGGAGTATAAGAGAAAGTT+GGG - chr1_1:4306206-4306225 None:intergenic 35.0%
TTGAGTGCCTTGTCAAATAT+TGG + chr1_1:4306305-4306324 Msa0002410:intron 35.0%
GAATGCACCAATATTTGACA+AGG - chr1_1:4306315-4306334 None:intergenic 35.0%
TGCAAATGGCTCACTTATTA+TGG + chr1_1:4306466-4306485 Msa0002410:intron 35.0%
GCAAATGGCTCACTTATTAT+GGG + chr1_1:4306467-4306486 Msa0002410:intron 35.0%
ATTGCAGTAGAACGTATCAT+TGG - chr1_1:4306550-4306569 None:intergenic 35.0%
GATACGTTCTACTGCAATTA+AGG + chr1_1:4306552-4306571 Msa0002410:intron 35.0%
GTTGCTATGGGTAAACTTTA+TGG + chr1_1:4306717-4306736 Msa0002410:intron 35.0%
ATTCATTATGCTCATAGCAC+AGG + chr1_1:4306810-4306829 Msa0002410:intron 35.0%
AACAACAGCAAGACCATTAT+TGG - chr1_1:4307027-4307046 None:intergenic 35.0%
!! ATAATGGTCTTGCTGTTGTT+TGG + chr1_1:4307027-4307046 Msa0002410:intron 35.0%
ACAACAGCAAGACCATTATA+TGG - chr1_1:4307092-4307111 None:intergenic 35.0%
!! ATAATGGTCTTGCTGTTGTT+TGG + chr1_1:4307027-4307046 Msa0002410:intron 35.0%
!! TTTGTTATTAGTTGGCAGGA+AGG + chr1_1:4307474-4307493 Msa0002410:intron 35.0%
ACATTTACTGTTTACTTCCC+AGG + chr1_1:4307531-4307550 Msa0002410:CDS 35.0%
! AAACATCAGTTTTTGATGCC+TGG + chr1_1:4307636-4307655 Msa0002410:CDS 35.0%
! CATCCCTTATTTGGAATGAT+GGG + chr1_1:4307669-4307688 Msa0002410:CDS 35.0%
! AAACAAAGTACCTCATTGGT+GGG - chr1_1:4307734-4307753 None:intergenic 35.0%
GTGATACACCACATGAAAAA+CGG + chr1_1:4307823-4307842 Msa0002410:CDS 35.0%
!!! AATTTAGGCCGTTTTTCATG+TGG - chr1_1:4307834-4307853 None:intergenic 35.0%
CATGAAAAACGGCCTAAATT+AGG + chr1_1:4307834-4307853 Msa0002410:CDS 35.0%
TCTGCACTAGAATTAGCAAA+AGG + chr1_1:4307861-4307880 Msa0002410:CDS 35.0%
!!! GACGAAGGTTTTTGTTTTGA+TGG - chr1_1:4308323-4308342 None:intergenic 35.0%
TCTACGACTTGTCAAATCAT+TGG - chr1_1:4308357-4308376 None:intergenic 35.0%
ATTTGACAAGTCGTAGAGAA+AGG + chr1_1:4308360-4308379 Msa0002410:CDS 35.0%
! GAAATGACTTGAAGTATCCT+TGG - chr1_1:4308387-4308406 None:intergenic 35.0%
!! TCTTCAGATGTTGATTTCAC+CGG - chr1_1:4308616-4308635 None:intergenic 35.0%
TTCTTACTCTTGATGTTGGT+TGG - chr1_1:4308672-4308691 None:intergenic 35.0%
CAGATTCTTACTCTTGATGT+TGG - chr1_1:4308676-4308695 None:intergenic 35.0%
!!! CTTTTTTCATGTGAAGCTGA+TGG - chr1_1:4308911-4308930 None:intergenic 35.0%
!!! CCCTAGAAGTATTACGATTT+TGG - chr1_1:4308943-4308962 None:intergenic 35.0%
CTGACAGGTAATAATAACCA+TGG + chr1_1:4309043-4309062 Msa0002410:intron 35.0%
TAATAACCATGGCTGAAAGA+AGG + chr1_1:4309054-4309073 Msa0002410:three_prime_UTR 35.0%
!!! AATGGGAGTTCTTGCTTTTT+TGG + chr1_1:4309173-4309192 Msa0002410:three_prime_UTR 35.0%
!!! ATGGGAGTTCTTGCTTTTTT+GGG + chr1_1:4309174-4309193 Msa0002410:three_prime_UTR 35.0%
!!! GTTCTTGCTTTTTTGGGTTT+AGG + chr1_1:4309180-4309199 Msa0002410:three_prime_UTR 35.0%
GTGATCTGTAACTTCAAGTG+TGG - chr1_1:4299246-4299265 None:intergenic 40.0%
! GTCTGCTTCTGTTGATGAAA+AGG + chr1_1:4299295-4299314 Msa0002410:CDS 40.0%
! CAGGTGATTCTTTTCCTGTT+GGG + chr1_1:4299348-4299367 Msa0002410:CDS 40.0%
!!! TCACTTTTAGTTCCAGCAAC+AGG - chr1_1:4299401-4299420 None:intergenic 40.0%
ACCTCAAGAAAGACATAGTG+AGG + chr1_1:4299469-4299488 Msa0002410:CDS 40.0%
ACCTCACTATGTCTTTCTTG+AGG - chr1_1:4299473-4299492 None:intergenic 40.0%
TGCAGAGACCATAAATAAGG+TGG - chr1_1:4299812-4299831 None:intergenic 40.0%
! TGAACTTCTGGTTGGAACTT+TGG + chr1_1:4299948-4299967 Msa0002410:intron 40.0%
!! AGATGGGGTCATTCTAAAAC+AGG - chr1_1:4300004-4300023 None:intergenic 40.0%
AGAATGACCCCATCTTATGT+TGG + chr1_1:4300009-4300028 Msa0002410:intron 40.0%
ATCGGGAAAAGAAGACGATA+TGG - chr1_1:4300217-4300236 None:intergenic 40.0%
! TTATCATAGGAAGGATTGGC+AGG - chr1_1:4300273-4300292 None:intergenic 40.0%
AGATGGTCCACGATTATCAT+AGG - chr1_1:4300286-4300305 None:intergenic 40.0%
GATACATGTCCAGATACACT+GGG - chr1_1:4300915-4300934 None:intergenic 40.0%
AGATACATGTCCAGATACAC+TGG - chr1_1:4300916-4300935 None:intergenic 40.0%
GTATCTGGACATGTATCTCA+TGG + chr1_1:4300918-4300937 Msa0002410:CDS 40.0%
TCAACTGGAAACCAGATGAT+GGG - chr1_1:4301124-4301143 None:intergenic 40.0%
ATCAACTGGAAACCAGATGA+TGG - chr1_1:4301125-4301144 None:intergenic 40.0%
!! TGGAAATGGCTTTGTACTGA+TGG - chr1_1:4301189-4301208 None:intergenic 40.0%
CGCGCACAAATATTTGTCTA+TGG + chr1_1:4301284-4301303 Msa0002410:CDS 40.0%
GATATAAGTGTGGAGTGGAA+TGG - chr1_1:4301420-4301439 None:intergenic 40.0%
TTTGTTCAGGCAGCATGAAT+TGG + chr1_1:4301974-4301993 Msa0002410:intron 40.0%
! ATGAATTGGCCTATACTCTC+CGG + chr1_1:4301988-4302007 Msa0002410:intron 40.0%
CACCAAAAGCAGATAGCATA+TGG - chr1_1:4302086-4302105 None:intergenic 40.0%
!! CATATGCTATCTGCTTTTGG+TGG + chr1_1:4302084-4302103 Msa0002410:CDS 40.0%
!! TTTTGAAGGGGACAAAAACC+TGG - chr1_1:4302111-4302130 None:intergenic 40.0%
!! TTTTACAGTGTGTTTGGTGG+AGG + chr1_1:4302174-4302193 Msa0002410:intron 40.0%
GATAGCCAATCTCTTGTGTT+TGG + chr1_1:4302241-4302260 Msa0002410:intron 40.0%
GGAAGAGAGACAATATTAGG+TGG + chr1_1:4302280-4302299 Msa0002410:intron 40.0%
! GAGAGAAATGCAAAAGGCAT+GGG - chr1_1:4302308-4302327 None:intergenic 40.0%
AGAGAGAAATGCAAAAGGCA+TGG - chr1_1:4302309-4302328 None:intergenic 40.0%
CATGCAGAGAGAAATGCAAA+AGG - chr1_1:4302314-4302333 None:intergenic 40.0%
GCTGCATAAGATCAAAACCA+GGG - chr1_1:4302388-4302407 None:intergenic 40.0%
AGCTGCATAAGATCAAAACC+AGG - chr1_1:4302389-4302408 None:intergenic 40.0%
GAGAGAAAGGAGAGAAATAG+AGG - chr1_1:4302538-4302557 None:intergenic 40.0%
GTGTTTGGTACAAGAGAGAA+AGG - chr1_1:4302551-4302570 None:intergenic 40.0%
GAATGAGGTGAGATAGAGTA+TGG - chr1_1:4302614-4302633 None:intergenic 40.0%
GAAAATGGGAAGAGAGAATG+AGG - chr1_1:4302629-4302648 None:intergenic 40.0%
!!! TTGTGTTTTCAGATGGTGGA+CGG + chr1_1:4302685-4302704 Msa0002410:intron 40.0%
ATTGTGTAATGAGATCCTGC+AGG + chr1_1:4302878-4302897 Msa0002410:intron 40.0%
CTTTGCTTAACTGCCAAATC+TGG - chr1_1:4302914-4302933 None:intergenic 40.0%
GTTAAGCAAAGTGAACAGCA+AGG + chr1_1:4302923-4302942 Msa0002410:CDS 40.0%
CAAAGTGAACAGCAAGGAAA+GGG + chr1_1:4302929-4302948 Msa0002410:CDS 40.0%
GGAGATGACAGAGGAATAAA+AGG - chr1_1:4303010-4303029 None:intergenic 40.0%
! TCCTGCTTTGGATTATTCAC+AGG + chr1_1:4303090-4303109 Msa0002410:CDS 40.0%
AGCATAAAAAATGTCCCACC+TGG + chr1_1:4303319-4303338 Msa0002410:CDS 40.0%
AAATTAGAAGCTGGTAGACC+AGG - chr1_1:4303340-4303359 None:intergenic 40.0%
GGTCTACCAGCTTCTAATTT+AGG + chr1_1:4303340-4303359 Msa0002410:CDS 40.0%
CTGATCCGAAGTCCAAAAAA+AGG + chr1_1:4303440-4303459 Msa0002410:CDS 40.0%
!! CAGGAGTTGATACTACTAGA+TGG - chr1_1:4303522-4303541 None:intergenic 40.0%
ATTAACAGCAGAAGTTGCAG+TGG - chr1_1:4303575-4303594 None:intergenic 40.0%
GTACTAAACAGAGGAGTAGA+TGG - chr1_1:4303643-4303662 None:intergenic 40.0%
AGGAGTCGATAATACTAGGT+GGG - chr1_1:4303779-4303798 None:intergenic 40.0%
TGACAGGAGTCGATAATACT+AGG - chr1_1:4303783-4303802 None:intergenic 40.0%
TTACTGGCACATTCAGAACA+GGG - chr1_1:4303843-4303862 None:intergenic 40.0%
! GATTTTTCCACAGCAGTTAC+TGG - chr1_1:4303859-4303878 None:intergenic 40.0%
AACTGCAGCAGAAGCTAATT+TGG - chr1_1:4304103-4304122 None:intergenic 40.0%
!! GATGAAGCATTGATCGTTTC+TGG + chr1_1:4304213-4304232 Msa0002410:CDS 40.0%
!! CTATATTATCGGTGCTGCAA+AGG + chr1_1:4304341-4304360 Msa0002410:CDS 40.0%
AGCTGGAAAGATCGTTACTA+TGG + chr1_1:4304470-4304489 Msa0002410:CDS 40.0%
GCTGGAAAGATCGTTACTAT+GGG + chr1_1:4304471-4304490 Msa0002410:CDS 40.0%
AAGAGTCTTCTCAGCAAGTT+GGG + chr1_1:4304556-4304575 Msa0002410:CDS 40.0%
CTCATTATGCACCTTGTGAA+AGG - chr1_1:4304715-4304734 None:intergenic 40.0%
ACACAGGCTTCTTTAACTGA+TGG + chr1_1:4304870-4304889 Msa0002410:CDS 40.0%
GCTTCTTTAACTGATGGCAA+TGG + chr1_1:4304876-4304895 Msa0002410:CDS 40.0%
TTACAGCAATCATGTGCATC+AGG + chr1_1:4305090-4305109 Msa0002410:intron 40.0%
! GCAAGGAATTTAAAGCAGCA+TGG + chr1_1:4305125-4305144 Msa0002410:CDS 40.0%
TAAGCTTGACCAACCTTCAT+CGG - chr1_1:4305215-4305234 None:intergenic 40.0%
! TGTTCTCTTCTAGAGAAGGA+GGG - chr1_1:4305519-4305538 None:intergenic 40.0%
! ATGTTCTCTTCTAGAGAAGG+AGG - chr1_1:4305520-4305539 None:intergenic 40.0%
! CAGATGTTCTCTTCTAGAGA+AGG - chr1_1:4305523-4305542 None:intergenic 40.0%
! TTTCTGAAGGTGGTTGTCAT+AGG + chr1_1:4305587-4305606 Msa0002410:intron 40.0%
CATCATACCTTCTTGCATCT+TGG + chr1_1:4305695-4305714 Msa0002410:intron 40.0%
TTCACATCCAAGATGCAAGA+AGG - chr1_1:4305705-4305724 None:intergenic 40.0%
! AAGGAATGGGTTTCACTTGA+AGG + chr1_1:4305836-4305855 Msa0002410:intron 40.0%
GAAAAGACCAAGACCAGATA+TGG + chr1_1:4305928-4305947 Msa0002410:CDS 40.0%
GGTAGATTATTGGTCCATTG+GGG + chr1_1:4305949-4305968 Msa0002410:CDS 40.0%
! GAGGGAGTATAAGAGAAAGT+TGG - chr1_1:4306207-4306226 None:intergenic 40.0%
! CTCACTTATAATGGGATGGA+GGG - chr1_1:4306225-4306244 None:intergenic 40.0%
! AAGGCTCACTTATAATGGGA+TGG - chr1_1:4306229-4306248 None:intergenic 40.0%
ATGGCTCACTTATTATGGGA+CGG + chr1_1:4306471-4306490 Msa0002410:intron 40.0%
TTGTGCACATTCAGTTCCTT+CGG + chr1_1:4306903-4306922 Msa0002410:intron 40.0%
! CTACAGACACTTTTAGTGTG+TGG - chr1_1:4306940-4306959 None:intergenic 40.0%
CGACTCATCATCCTAGTTAT+TGG + chr1_1:4306963-4306982 Msa0002410:intron 40.0%
AACTTAAGAGCTGCAAAGCT+TGG + chr1_1:4307001-4307020 Msa0002410:intron 40.0%
!! CATTGGCTTTGGCCATATAA+TGG + chr1_1:4307077-4307096 Msa0002410:intron 40.0%
!! CAGTTGGTCTTTCAACTGAA+CGG - chr1_1:4307170-4307189 None:intergenic 40.0%
GTGGCAGCATAATGAAACTT+TGG - chr1_1:4307363-4307382 None:intergenic 40.0%
!!! ATTTGGTTTTCTGCAGCAAG+TGG + chr1_1:4307611-4307630 Msa0002410:intron 40.0%
CATTCCAAATAAGGGATGGA+CGG - chr1_1:4307667-4307686 None:intergenic 40.0%
CCATCATTCCAAATAAGGGA+TGG - chr1_1:4307671-4307690 None:intergenic 40.0%
! CCATCCCTTATTTGGAATGA+TGG + chr1_1:4307668-4307687 Msa0002410:CDS 40.0%
AAATAACAGTCCCACCAATG+AGG + chr1_1:4307721-4307740 Msa0002410:CDS 40.0%
! CAAACAAAGTACCTCATTGG+TGG - chr1_1:4307735-4307754 None:intergenic 40.0%
GGAAAAGACAAGGCTTCTAA+AGG + chr1_1:4307882-4307901 Msa0002410:CDS 40.0%
!! TTCTAAAGGTACTGATGCTG+CGG + chr1_1:4307896-4307915 Msa0002410:CDS 40.0%
TTCAACAACCTCAGTTCAGT+GGG - chr1_1:4307933-4307952 None:intergenic 40.0%
ATTCAACAACCTCAGTTCAG+TGG - chr1_1:4307934-4307953 None:intergenic 40.0%
! AGGTCTGGTCTTCAAAAAGA+AGG + chr1_1:4308032-4308051 Msa0002410:CDS 40.0%
! GAAGGACCAAGAGTGATTTT+CGG + chr1_1:4308050-4308069 Msa0002410:CDS 40.0%
! GATTTTCGGAGTTCCTAAAC+CGG + chr1_1:4308064-4308083 Msa0002410:CDS 40.0%
! ATTTTCGGAGTTCCTAAACC+GGG + chr1_1:4308065-4308084 Msa0002410:CDS 40.0%
TTTGTATTCTTCCCCGGTTT+AGG - chr1_1:4308080-4308099 None:intergenic 40.0%
AGTAAGCAAGCATTATGTCG+CGG + chr1_1:4308109-4308128 Msa0002410:CDS 40.0%
TGGGACAAGTAGGATTAATG+AGG + chr1_1:4308133-4308152 Msa0002410:CDS 40.0%
GGGACAAGTAGGATTAATGA+GGG + chr1_1:4308134-4308153 Msa0002410:CDS 40.0%
ACAAGTAGGATTAATGAGGG+AGG + chr1_1:4308137-4308156 Msa0002410:CDS 40.0%
AGGATTAATGAGGGAGGAAA+TGG + chr1_1:4308143-4308162 Msa0002410:CDS 40.0%
CAGTTCAATACACGATGCTA+AGG + chr1_1:4308226-4308245 Msa0002410:CDS 40.0%
TTGGTAGGAAAGTTTGACGA+AGG - chr1_1:4308338-4308357 None:intergenic 40.0%
CGACTTGTCAAATCATTGGT+AGG - chr1_1:4308353-4308372 None:intergenic 40.0%
ATCTCAGCGTGAAAATCAGA+TGG + chr1_1:4308415-4308434 Msa0002410:CDS 40.0%
AGCGTGAAAATCAGATGGAA+AGG + chr1_1:4308420-4308439 Msa0002410:CDS 40.0%
GCGTGAAAATCAGATGGAAA+GGG + chr1_1:4308421-4308440 Msa0002410:CDS 40.0%
! CCTTTACTTACTCTTGCTGT+GGG - chr1_1:4308533-4308552 None:intergenic 40.0%
TCCTTTACTTACTCTTGCTG+TGG - chr1_1:4308534-4308553 None:intergenic 40.0%
AAAGGCTTCGAATGGAAATC+CGG + chr1_1:4308594-4308613 Msa0002410:CDS 40.0%
!! AAGCCTGATGTTGTTGATTC+TGG + chr1_1:4308835-4308854 Msa0002410:intron 40.0%
GATCCAGAATCAACAACATC+AGG - chr1_1:4308841-4308860 None:intergenic 40.0%
GATTCTGGATCGTCAGTTAT+TGG + chr1_1:4308850-4308869 Msa0002410:intron 40.0%
AAAATCCTGGCTACAAAAGC+AGG - chr1_1:4309007-4309026 None:intergenic 40.0%
! ACTTAATGATCGACTCTGAC+AGG + chr1_1:4309028-4309047 Msa0002410:intron 40.0%
! CTGAAAGAAGGTTTTGCGAT+GGG + chr1_1:4309066-4309085 Msa0002410:three_prime_UTR 40.0%
TACAGTGCATAAGATGAGAC+AGG - chr1_1:4309266-4309285 None:intergenic 40.0%
CAGATCACCATGAGCTTGAA+AGG + chr1_1:4299258-4299277 Msa0002410:CDS 45.0%
GCTTCATCCTTTCAAGCTCA+TGG - chr1_1:4299268-4299287 None:intergenic 45.0%
! GCAGGTGATTCTTTTCCTGT+TGG + chr1_1:4299347-4299366 Msa0002410:CDS 45.0%
TTAGTTCCAGCAACAGGACA+GGG - chr1_1:4299395-4299414 None:intergenic 45.0%
! TTTAGTTCCAGCAACAGGAC+AGG - chr1_1:4299396-4299415 None:intergenic 45.0%
! ATCGTGCTTTGCCCTTTTCT+AGG + chr1_1:4299717-4299736 Msa0002410:intron 45.0%
CTGCATAGCGTATGTGATTG+TGG + chr1_1:4299827-4299846 Msa0002410:intron 45.0%
CAGCAGAAACAAGACTAGAC+AGG - chr1_1:4299910-4299929 None:intergenic 45.0%
!! CTGTCTAGTCTTGTTTCTGC+TGG + chr1_1:4299908-4299927 Msa0002410:intron 45.0%
!! TGGGGTCATTCTAAAACAGG+AGG - chr1_1:4300001-4300020 None:intergenic 45.0%
CATAATGAGCTGCATGAGAC+TGG + chr1_1:4300240-4300259 Msa0002410:CDS 45.0%
GGTCCACGATTATCATAGGA+AGG - chr1_1:4300282-4300301 None:intergenic 45.0%
CGTGGACCATCTGTTACATT+TGG + chr1_1:4300294-4300313 Msa0002410:CDS 45.0%
GGGCTTCCAAATGTAACAGA+TGG - chr1_1:4300303-4300322 None:intergenic 45.0%
TTTGCCACTAGATCTACCTC+AGG - chr1_1:4300480-4300499 None:intergenic 45.0%
TTGGCTGCAATAACAGGATG+GGG - chr1_1:4300564-4300583 None:intergenic 45.0%
GTTGGCTGCAATAACAGGAT+GGG - chr1_1:4300565-4300584 None:intergenic 45.0%
! TGTTGGCTGCAATAACAGGA+TGG - chr1_1:4300566-4300585 None:intergenic 45.0%
TCCTGTTATTGCAGCCAACA+AGG + chr1_1:4300566-4300585 Msa0002410:CDS 45.0%
! TCCTTGTTGGCTGCAATAAC+AGG - chr1_1:4300570-4300589 None:intergenic 45.0%
TTCCCTCTTAACACGCAAGA+TGG + chr1_1:4300717-4300736 Msa0002410:intron 45.0%
AGCCATCTTGCGTGTTAAGA+GGG - chr1_1:4300722-4300741 None:intergenic 45.0%
AAGCCATCTTGCGTGTTAAG+AGG - chr1_1:4300723-4300742 None:intergenic 45.0%
!! TCTCCACTGGCTTCTGAATT+AGG + chr1_1:4300879-4300898 Msa0002410:CDS 45.0%
GTACCTAATTCAGAAGCCAG+TGG - chr1_1:4300885-4300904 None:intergenic 45.0%
TGTCCAGATACACTGGGTTT+GGG - chr1_1:4300909-4300928 None:intergenic 45.0%
ATGTCCAGATACACTGGGTT+TGG - chr1_1:4300910-4300929 None:intergenic 45.0%
GGAAGTCCACAAATACCTGA+TGG + chr1_1:4300939-4300958 Msa0002410:CDS 45.0%
CTTCGTGCTAAATCACCATC+AGG - chr1_1:4300957-4300976 None:intergenic 45.0%
ACCTAATAAGACAGCCGGAA+AGG + chr1_1:4301016-4301035 Msa0002410:CDS 45.0%
! TCCTTTCCGGCTGTCTTATT+AGG - chr1_1:4301020-4301039 None:intergenic 45.0%
CAGCAAGACGGTCAGAAAAA+GGG + chr1_1:4301072-4301091 Msa0002410:CDS 45.0%
AGCAAGACGGTCAGAAAAAG+GGG + chr1_1:4301073-4301092 Msa0002410:CDS 45.0%
ATAATACTGGTGTGCCTCGT+TGG - chr1_1:4301153-4301172 None:intergenic 45.0%
AACGAGGCACACCAGTATTA+TGG + chr1_1:4301152-4301171 Msa0002410:CDS 45.0%
ACGAGGCACACCAGTATTAT+GGG + chr1_1:4301153-4301172 Msa0002410:CDS 45.0%
!! GCAGCAGAAGTGTTCAAATC+TGG - chr1_1:4301209-4301228 None:intergenic 45.0%
! GCCCATATGCTATCTGCTTT+TGG + chr1_1:4302081-4302100 Msa0002410:CDS 45.0%
AAAGAGGGGAGAGAGAAGTT+GGG + chr1_1:4302214-4302233 Msa0002410:intron 45.0%
TCTCTGCATGTGCGAAGAAA+GGG + chr1_1:4302324-4302343 Msa0002410:intron 45.0%
! TAGGAGCTTAAGGGTGTGTT+TGG - chr1_1:4302661-4302680 None:intergenic 45.0%
!!! AGATGGTGGACGGAACTTTT+GGG + chr1_1:4302695-4302714 Msa0002410:intron 45.0%
AGGTACTAGAAGCCCAGATT+TGG + chr1_1:4302898-4302917 Msa0002410:intron 45.0%
GCAAAGTGAACAGCAAGGAA+AGG + chr1_1:4302928-4302947 Msa0002410:CDS 45.0%
!! AAGGGTATCTCTTCACCTCT+TGG + chr1_1:4302947-4302966 Msa0002410:CDS 45.0%
GATTGCAGGGAATCACATGA+GGG - chr1_1:4303052-4303071 None:intergenic 45.0%
AGATTGCAGGGAATCACATG+AGG - chr1_1:4303053-4303072 None:intergenic 45.0%
GCCTGTGAATAATCCAAAGC+AGG - chr1_1:4303094-4303113 None:intergenic 45.0%
CACCACTGCGAAACTTTCTT+GGG + chr1_1:4303143-4303162 Msa0002410:CDS 45.0%
GACTTAACTGTATCTGCGAC+AGG - chr1_1:4303265-4303284 None:intergenic 45.0%
ACAACAGAGTCTGAGGATCT+TGG + chr1_1:4303472-4303491 Msa0002410:CDS 45.0%
AGTGGATATATGGCTGCTGA+CGG - chr1_1:4303545-4303564 None:intergenic 45.0%
GGAGTAGATGGCAGAAATAC+AGG - chr1_1:4303631-4303650 None:intergenic 45.0%
AAAGGTTACAACAGAGTCCG+AGG + chr1_1:4303723-4303742 Msa0002410:CDS 45.0%
TAGGTGGGACTGCAAATGAA+TGG - chr1_1:4303764-4303783 None:intergenic 45.0%
CAGGAGTCGATAATACTAGG+TGG - chr1_1:4303780-4303799 None:intergenic 45.0%
GATATATGGCTGCTGATGAC+AGG - chr1_1:4303799-4303818 None:intergenic 45.0%
CACATTCAGAACAGGGGTTT+CGG - chr1_1:4303836-4303855 None:intergenic 45.0%
TACTGGCACATTCAGAACAG+GGG - chr1_1:4303842-4303861 None:intergenic 45.0%
GTTACTGGCACATTCAGAAC+AGG - chr1_1:4303844-4303863 None:intergenic 45.0%
AGGCGATCAGCAAAAGATAG+AGG - chr1_1:4303898-4303917 None:intergenic 45.0%
TTTGCTGATCGCCTCAAAAG+TGG + chr1_1:4303904-4303923 Msa0002410:CDS 45.0%
!!! CAACATTCCAGCCACTTTTG+AGG - chr1_1:4303918-4303937 None:intergenic 45.0%
TGGCTGGAATGTTGAGAAGA+AGG + chr1_1:4303924-4303943 Msa0002410:CDS 45.0%
!! TGGATTGGCATCAGATGTTG+AGG + chr1_1:4304077-4304096 Msa0002410:CDS 45.0%
TGCACTGCAAGCAAAACTGA+TGG + chr1_1:4304188-4304207 Msa0002410:CDS 45.0%
TCCTAAGTTACCCATACCCT+CGG - chr1_1:4304268-4304287 None:intergenic 45.0%
!! TATTATCGGTGCTGCAAAGG+AGG + chr1_1:4304344-4304363 Msa0002410:CDS 45.0%
!! AGCTCGTTTTCTGGCAAATG+AGG - chr1_1:4304394-4304413 None:intergenic 45.0%
GCTTCTACCAAGTCGCTTAA+CGG - chr1_1:4304507-4304526 None:intergenic 45.0%
!! TTAAGCGACTTGGTAGAAGC+TGG + chr1_1:4304507-4304526 Msa0002410:CDS 45.0%
TTGCTGAGAAGACTCTTGGA+AGG - chr1_1:4304553-4304572 None:intergenic 45.0%
!! CAACTTGCTGAGAAGACTCT+TGG - chr1_1:4304557-4304576 None:intergenic 45.0%
CAAGAGTCTTCTCAGCAAGT+TGG + chr1_1:4304555-4304574 Msa0002410:CDS 45.0%
! CAGCAAGTTGGGCTATTGAA+AGG + chr1_1:4304567-4304586 Msa0002410:CDS 45.0%
! GAAAGGCATGAGTAGAGATC+TGG + chr1_1:4304584-4304603 Msa0002410:CDS 45.0%
!! CTGGTGAGTGTTGACAATGT+TGG + chr1_1:4304603-4304622 Msa0002410:CDS 45.0%
GGTGCATAATGAGATGTCAC+TGG + chr1_1:4304722-4304741 Msa0002410:CDS 45.0%
AGAAGCCTGTGTTTCAGACT+CGG - chr1_1:4304862-4304881 None:intergenic 45.0%
CTTTGCTGATGATTATGCCC+TGG + chr1_1:4305043-4305062 Msa0002410:intron 45.0%
AATGCTCTTGTAGCCGATGA+AGG + chr1_1:4305199-4305218 Msa0002410:CDS 45.0%
ATATCTGCAAGAGTCAACGG+AGG + chr1_1:4305326-4305345 Msa0002410:intron 45.0%
TATCTGCAAGAGTCAACGGA+GGG + chr1_1:4305327-4305346 Msa0002410:intron 45.0%
GGCTCATTGTGTGTAAACTC+AGG + chr1_1:4305348-4305367 Msa0002410:intron 45.0%
TGCTAAGGGTTAAGGAGTTG+GGG - chr1_1:4305477-4305496 None:intergenic 45.0%
GTGCTAAGGGTTAAGGAGTT+GGG - chr1_1:4305478-4305497 None:intergenic 45.0%
TGTGCTAAGGGTTAAGGAGT+TGG - chr1_1:4305479-4305498 None:intergenic 45.0%
! CTGGTTTGTGCTAAGGGTTA+AGG - chr1_1:4305485-4305504 None:intergenic 45.0%
!! GCTCAACTGGTTTGTGCTAA+GGG - chr1_1:4305491-4305510 None:intergenic 45.0%
!! AGCTCAACTGGTTTGTGCTA+AGG - chr1_1:4305492-4305511 None:intergenic 45.0%
! TTCTCTTCTAGAGAAGGAGG+GGG - chr1_1:4305517-4305536 None:intergenic 45.0%
! GTTCTCTTCTAGAGAAGGAG+GGG - chr1_1:4305518-4305537 None:intergenic 45.0%
TTTAGGTGCAGGGCCTTTAA+AGG + chr1_1:4305817-4305836 Msa0002410:intron 45.0%
! TGCAGGGCCTTTAAAGGAAT+GGG + chr1_1:4305823-4305842 Msa0002410:intron 45.0%
ATGGGTTTCACTTGAAGGTG+AGG + chr1_1:4305841-4305860 Msa0002410:intron 45.0%
TGGGTTTCACTTGAAGGTGA+GGG + chr1_1:4305842-4305861 Msa0002410:intron 45.0%
AACGAGCAGCACGAATTCTA+GGG - chr1_1:4305877-4305896 None:intergenic 45.0%
TGCATCAACTCTATCCCCAA+TGG - chr1_1:4305966-4305985 None:intergenic 45.0%
!! TTGGGGATAGAGTTGATGCA+TGG + chr1_1:4305966-4305985 Msa0002410:CDS 45.0%
! GCTCACTTATAATGGGATGG+AGG - chr1_1:4306226-4306245 None:intergenic 45.0%
! ATGGGACGGAGAGAGTATAT+AGG + chr1_1:4306485-4306504 Msa0002410:intron 45.0%
! ACGGAGAGAGTATATAGGAC+TGG + chr1_1:4306490-4306509 Msa0002410:intron 45.0%
! GAGAGAGTATATAGGACTGG+CGG + chr1_1:4306493-4306512 Msa0002410:intron 45.0%
! AGAGAGTATATAGGACTGGC+GGG + chr1_1:4306494-4306513 Msa0002410:intron 45.0%
TGTGCACATTCAGTTCCTTC+GGG + chr1_1:4306904-4306923 Msa0002410:intron 45.0%
CTGCAAAGCTTGGCCAATAA+TGG + chr1_1:4307011-4307030 Msa0002410:intron 45.0%
TCAAACTGCAAGAGCTGCAT+TGG + chr1_1:4307060-4307079 Msa0002410:intron 45.0%
GTTGAAAGACCAACTGCGAT+TGG + chr1_1:4307174-4307193 Msa0002410:intron 45.0%
! GGAAGTACACGATAAAGGTG+TGG - chr1_1:4307382-4307401 None:intergenic 45.0%
TTCTCCGTCCATCCCTTATT+TGG + chr1_1:4307660-4307679 Msa0002410:CDS 45.0%
GAAATGGATCGAGTCTCCTA+AGG + chr1_1:4307691-4307710 Msa0002410:CDS 45.0%
! CTGTTATTTGCTCCCACCTT+AGG - chr1_1:4307710-4307729 None:intergenic 45.0%
AACTGTGCGGTTTGAATGCA+GGG + chr1_1:4307801-4307820 Msa0002410:intron 45.0%
GAAACCAGATGTACACAGAC+TGG + chr1_1:4308007-4308026 Msa0002410:CDS 45.0%
GGAACTCCGAAAATCACTCT+TGG - chr1_1:4308059-4308078 None:intergenic 45.0%
! TTTTCGGAGTTCCTAAACCG+GGG + chr1_1:4308066-4308085 Msa0002410:CDS 45.0%
TCTTCAATACCGCATGCTTC+AGG + chr1_1:4308185-4308204 Msa0002410:CDS 45.0%
ATGCTTCAGGATCACGTAGT+TGG + chr1_1:4308198-4308217 Msa0002410:CDS 45.0%
ACTCTACCCAAAACGTTCTG+TGG - chr1_1:4308296-4308315 None:intergenic 45.0%
AAGTCGTAGAGAAAGGACCA+AGG + chr1_1:4308367-4308386 Msa0002410:CDS 45.0%
!! GGCATCCTATTCTGAAACCA+CGG + chr1_1:4308442-4308461 Msa0002410:CDS 45.0%
!! GCATCCTATTCTGAAACCAC+GGG + chr1_1:4308443-4308462 Msa0002410:CDS 45.0%
! TTACTTACTCTTGCTGTGGG+AGG - chr1_1:4308530-4308549 None:intergenic 45.0%
CCCACAGCAAGAGTAAGTAA+AGG + chr1_1:4308530-4308549 Msa0002410:CDS 45.0%
ATCTTGCGATTGGATCTACG+AGG - chr1_1:4308649-4308668 None:intergenic 45.0%
! TGTTGGTTGGATCTTGCGAT+TGG - chr1_1:4308659-4308678 None:intergenic 45.0%
CTGGATCGTCAGTTATTGGA+AGG + chr1_1:4308854-4308873 Msa0002410:intron 45.0%
!! AATCTCCTGCTTTTGTAGCC+AGG + chr1_1:4308999-4309018 Msa0002410:intron 45.0%
GCAAAACCTTCTTTCAGCCA+TGG - chr1_1:4309063-4309082 None:intergenic 45.0%
! GCTGAAAGAAGGTTTTGCGA+TGG + chr1_1:4309065-4309084 Msa0002410:three_prime_UTR 45.0%
!! CAGTTGGTCTTCCAACTGAA+CGG - chr1_1:4309094-4309113 None:intergenic 45.0%
TTGGGTTTAGGCAGACTAGT+TGG + chr1_1:4307261-4307280 Msa0002410:intron 45.0%
!! TTATATTTATTTAATTGTTA+TGG + chr1_1:4301343-4301362 Msa0002410:intron 5.0%
!!! ATAATTTAAAATTAATGTAT+TGG - chr1_1:4307569-4307588 None:intergenic 5.0%
TCCTGTTGGGTCTTCTGAAC+TGG + chr1_1:4299361-4299380 Msa0002410:CDS 50.0%
TCCAGTTCAGAAGACCCAAC+AGG - chr1_1:4299365-4299384 None:intergenic 50.0%
AATGAGCTGCATGAGACTGG+AGG + chr1_1:4300243-4300262 Msa0002410:CDS 50.0%
AGCTCCTGAGGTAGATCTAG+TGG + chr1_1:4300473-4300492 Msa0002410:CDS 50.0%
ACCCCAATAGGAGCAAATGC+CGG + chr1_1:4300528-4300547 Msa0002410:CDS 50.0%
ACCGGCATTTGCTCCTATTG+GGG - chr1_1:4300532-4300551 None:intergenic 50.0%
CACCGGCATTTGCTCCTATT+GGG - chr1_1:4300533-4300552 None:intergenic 50.0%
TCACCGGCATTTGCTCCTAT+TGG - chr1_1:4300534-4300553 None:intergenic 50.0%
TGCAGCCAACAAGGAATCAG+TGG + chr1_1:4300575-4300594 Msa0002410:CDS 50.0%
! GGTTCTAGCAGAATCTCCAC+TGG + chr1_1:4300866-4300885 Msa0002410:intron 50.0%
ACTCCCAAACCCAGTGTATC+TGG + chr1_1:4300903-4300922 Msa0002410:CDS 50.0%
! TGTCTTATTAGGTGCTCGCC+TGG - chr1_1:4301009-4301028 None:intergenic 50.0%
CGAGCACCTAATAAGACAGC+CGG + chr1_1:4301011-4301030 Msa0002410:CDS 50.0%
! CCTTTTTCTGACCGTCTTGC+TGG - chr1_1:4301074-4301093 None:intergenic 50.0%
CCAGCAAGACGGTCAGAAAA+AGG + chr1_1:4301071-4301090 Msa0002410:CDS 50.0%
GCAAGACGGTCAGAAAAAGG+GGG + chr1_1:4301074-4301093 Msa0002410:CDS 50.0%
GTATCTCTGAGCCCATCATC+TGG + chr1_1:4301110-4301129 Msa0002410:CDS 50.0%
CCTCGTTGGATTGCATCAAC+TGG - chr1_1:4301139-4301158 None:intergenic 50.0%
! CCAGTTGATGCAATCCAACG+AGG + chr1_1:4301136-4301155 Msa0002410:CDS 50.0%
!! CTATCTGCTTTTGGTGGTCC+AGG + chr1_1:4302090-4302109 Msa0002410:intron 50.0%
GAAAGAGGGGAGAGAGAAGT+TGG + chr1_1:4302213-4302232 Msa0002410:intron 50.0%
AAGAGGGGAGAGAGAAGTTG+GGG + chr1_1:4302215-4302234 Msa0002410:intron 50.0%
CTCTCTGCATGTGCGAAGAA+AGG + chr1_1:4302323-4302342 Msa0002410:intron 50.0%
CATGTGCGAAGAAAGGGAGT+GGG + chr1_1:4302330-4302349 Msa0002410:intron 50.0%
ATGTGCGAAGAAAGGGAGTG+GGG + chr1_1:4302331-4302350 Msa0002410:intron 50.0%
!!! CAGATGGTGGACGGAACTTT+TGG + chr1_1:4302694-4302713 Msa0002410:intron 50.0%
!! GGAACTTTTGGGAGAAAGCC+TGG + chr1_1:4302706-4302725 Msa0002410:intron 50.0%
! GAAAGCCTGGTCTTCATGCT+TGG + chr1_1:4302719-4302738 Msa0002410:intron 50.0%
CCTTTCCAAGCATGAAGACC+AGG - chr1_1:4302727-4302746 None:intergenic 50.0%
! CCTGGTCTTCATGCTTGGAA+AGG + chr1_1:4302724-4302743 Msa0002410:intron 50.0%
TTCATGCTTGGAAAGGCAGC+AGG + chr1_1:4302731-4302750 Msa0002410:intron 50.0%
TCATGCTTGGAAAGGCAGCA+GGG + chr1_1:4302732-4302751 Msa0002410:intron 50.0%
ACACCACTGCAATCACGATC+CGG + chr1_1:4302783-4302802 Msa0002410:intron 50.0%
ATACCGGATCGTGATTGCAG+TGG - chr1_1:4302789-4302808 None:intergenic 50.0%
TTCCTCTGTCATCTCCCCTT+TGG + chr1_1:4303014-4303033 Msa0002410:CDS 50.0%
!! GGAGTTGGTAGACTCCAAAG+GGG - chr1_1:4303031-4303050 None:intergenic 50.0%
!! GGGAGTTGGTAGACTCCAAA+GGG - chr1_1:4303032-4303051 None:intergenic 50.0%
!! AGGGAGTTGGTAGACTCCAA+AGG - chr1_1:4303033-4303052 None:intergenic 50.0%
AGGGAATCACATGAGGGAGT+TGG - chr1_1:4303046-4303065 None:intergenic 50.0%
!! TGCAAGGGCACTAGATTGCA+GGG - chr1_1:4303065-4303084 None:intergenic 50.0%
!! TTGCAAGGGCACTAGATTGC+AGG - chr1_1:4303066-4303085 None:intergenic 50.0%
CAATCTAGTGCCCTTGCAAG+AGG + chr1_1:4303067-4303086 Msa0002410:CDS 50.0%
CAAAGCAGGACCTCTTGCAA+GGG - chr1_1:4303080-4303099 None:intergenic 50.0%
! CGCAGTGGTGGAGTTTGATT+AGG - chr1_1:4303133-4303152 None:intergenic 50.0%
CCAAGAAAGTTTCGCAGTGG+TGG - chr1_1:4303145-4303164 None:intergenic 50.0%
CCACCACTGCGAAACTTTCT+TGG + chr1_1:4303142-4303161 Msa0002410:CDS 50.0%
TGCCCAAGAAAGTTTCGCAG+TGG - chr1_1:4303148-4303167 None:intergenic 50.0%
GGAGTAGAAGAAGCAGTCCA+TGG - chr1_1:4303208-4303227 None:intergenic 50.0%
TAGGAACTGCTATCGAGTGC+AGG - chr1_1:4303229-4303248 None:intergenic 50.0%
GACAGGAGATGCAGAAGGAT+AGG - chr1_1:4303248-4303267 None:intergenic 50.0%
TAGAAGCTGGTAGACCAGGT+GGG - chr1_1:4303336-4303355 None:intergenic 50.0%
TTAGAAGCTGGTAGACCAGG+TGG - chr1_1:4303337-4303356 None:intergenic 50.0%
GTCTGAGGATCTTGGTCAGA+AGG + chr1_1:4303480-4303499 Msa0002410:CDS 50.0%
TGGCGACAGCAGTGGATATA+TGG - chr1_1:4303555-4303574 None:intergenic 50.0%
ACAACAGAGTCCGAGGATCT+TGG + chr1_1:4303730-4303749 Msa0002410:CDS 50.0%
ATTCAGAACAGGGGTTTCGG+TGG - chr1_1:4303833-4303852 None:intergenic 50.0%
GAATGTGCCAGTAACTGCTG+TGG + chr1_1:4303849-4303868 Msa0002410:CDS 50.0%
GGAGGCAAGGATAAATGCAG+AGG + chr1_1:4303978-4303997 Msa0002410:CDS 50.0%
TTCTGCTCTTTCTGCTGCTG+CGG + chr1_1:4304005-4304024 Msa0002410:CDS 50.0%
TGCTGCGGTGAATCATAGCA+TGG + chr1_1:4304020-4304039 Msa0002410:CDS 50.0%
TGCAGCATTTGACGCAACAC+TGG - chr1_1:4304172-4304191 None:intergenic 50.0%
! TCCGAGGGTATGGGTAACTT+AGG + chr1_1:4304264-4304283 Msa0002410:CDS 50.0%
AACCCCTGCTTCCATCTTGA+AGG + chr1_1:4304293-4304312 Msa0002410:CDS 50.0%
ACCCCTGCTTCCATCTTGAA+GGG + chr1_1:4304294-4304313 Msa0002410:CDS 50.0%
ACCCTTCAAGATGGAAGCAG+GGG - chr1_1:4304298-4304317 None:intergenic 50.0%
CACCCTTCAAGATGGAAGCA+GGG - chr1_1:4304299-4304318 None:intergenic 50.0%
! TCCATCTTGAAGGGTGCAAG+TGG + chr1_1:4304303-4304322 Msa0002410:CDS 50.0%
TCCACTTGCACCCTTCAAGA+TGG - chr1_1:4304307-4304326 None:intergenic 50.0%
CTGCAAAGGAGGCTTCAAGA+AGG + chr1_1:4304355-4304374 Msa0002410:CDS 50.0%
TATTGTGAAGGCTGCTGAGC+TGG + chr1_1:4304428-4304447 Msa0002410:CDS 50.0%
! GCAGAAGCTGTTTCACAAGC+TGG + chr1_1:4304453-4304472 Msa0002410:CDS 50.0%
TCCTTTGCCGTTAAGCGACT+TGG + chr1_1:4304497-4304516 Msa0002410:CDS 50.0%
ACCAAGTCGCTTAACGGCAA+AGG - chr1_1:4304501-4304520 None:intergenic 50.0%
AAAGGGTGACTCCTGACCTA+CGG - chr1_1:4304697-4304716 None:intergenic 50.0%
TCAGGAGTCACCCTTTCACA+AGG + chr1_1:4304701-4304720 Msa0002410:CDS 50.0%
GAAGCCTGTGTTTCAGACTC+GGG - chr1_1:4304861-4304880 None:intergenic 50.0%
CAAAGAGGGCTCACATGTAG+AGG + chr1_1:4304926-4304945 Msa0002410:CDS 50.0%
CTCTTGTAGCCGATGAAGGT+TGG + chr1_1:4305203-4305222 Msa0002410:intron 50.0%
CTGGGTTCAAACCCAGACAA+GGG - chr1_1:4305451-4305470 None:intergenic 50.0%
GCTAAGGGTTAAGGAGTTGG+GGG - chr1_1:4305476-4305495 None:intergenic 50.0%
! TCTCTTCTAGAGAAGGAGGG+GGG - chr1_1:4305516-4305535 None:intergenic 50.0%
! GTGCAGGGCCTTTAAAGGAA+TGG + chr1_1:4305822-4305841 Msa0002410:intron 50.0%
ACGAGCAGCACGAATTCTAG+GGG - chr1_1:4305876-4305895 None:intergenic 50.0%
GAACGAGCAGCACGAATTCT+AGG - chr1_1:4305878-4305897 None:intergenic 50.0%
GTGCACATTCAGTTCCTTCG+GGG + chr1_1:4306905-4306924 Msa0002410:intron 50.0%
TGCACATTCAGTTCCTTCGG+GGG + chr1_1:4306906-4306925 Msa0002410:intron 50.0%
!! TGCAAGAGCTGCATTGGCTT+TGG + chr1_1:4307066-4307085 Msa0002410:intron 50.0%
ATGGATCGAGTCTCCTAAGG+TGG + chr1_1:4307694-4307713 Msa0002410:CDS 50.0%
TGGATCGAGTCTCCTAAGGT+GGG + chr1_1:4307695-4307714 Msa0002410:CDS 50.0%
CACAGTTCAGTACAGAAGGC+AGG - chr1_1:4307788-4307807 None:intergenic 50.0%
GCCTTCTGTACTGAACTGTG+CGG + chr1_1:4307788-4307807 Msa0002410:intron 50.0%
ACCGCACAGTTCAGTACAGA+AGG - chr1_1:4307792-4307811 None:intergenic 50.0%
GAACTGTGCGGTTTGAATGC+AGG + chr1_1:4307800-4307819 Msa0002410:intron 50.0%
CAGCTAATCCCACTGAACTG+AGG + chr1_1:4307922-4307941 Msa0002410:CDS 50.0%
AGCAAGCATTATGTCGCGGA+TGG + chr1_1:4308113-4308132 Msa0002410:CDS 50.0%
GCAAGCATTATGTCGCGGAT+GGG + chr1_1:4308114-4308133 Msa0002410:CDS 50.0%
CTACGTGATCCTGAAGCATG+CGG - chr1_1:4308197-4308216 None:intergenic 50.0%
TTCAAGCCCACTTCTAAGCC+TGG + chr1_1:4308266-4308285 Msa0002410:CDS 50.0%
AAAACGTTCTGTGGCCTTCC+AGG - chr1_1:4308287-4308306 None:intergenic 50.0%
! TGGAAGGCCACAGAACGTTT+TGG + chr1_1:4308286-4308305 Msa0002410:CDS 50.0%
! GGAAGGCCACAGAACGTTTT+GGG + chr1_1:4308287-4308306 Msa0002410:CDS 50.0%
TGCTCCCGTGGTTTCAGAAT+AGG - chr1_1:4308450-4308469 None:intergenic 50.0%
!! TATTCTGAAACCACGGGAGC+AGG + chr1_1:4308449-4308468 Msa0002410:CDS 50.0%
GACCAACCTCGTATTCCTCA+CGG + chr1_1:4308471-4308490 Msa0002410:CDS 50.0%
ACCAACCTCGTATTCCTCAC+GGG + chr1_1:4308472-4308491 Msa0002410:CDS 50.0%
TTCAGTTGAAGATGCCCGTG+AGG - chr1_1:4308489-4308508 None:intergenic 50.0%
!! GCTGTGGGAGGCTTTTTAGT+GGG - chr1_1:4308518-4308537 None:intergenic 50.0%
! TGCTGTGGGAGGCTTTTTAG+TGG - chr1_1:4308519-4308538 None:intergenic 50.0%
AAAGGAAAACCTGCACCTGC+TGG + chr1_1:4308548-4308567 Msa0002410:CDS 50.0%
GGTTGGGTAAGGGTGAGAAA+AGG + chr1_1:4308576-4308595 Msa0002410:CDS 50.0%
GGGTGAGAAAAGGCTTCGAA+TGG + chr1_1:4308586-4308605 Msa0002410:CDS 50.0%
GATTGGATCTACGAGGCTCA+AGG - chr1_1:4308642-4308661 None:intergenic 50.0%
GTTGGAAGACCAACTGCGAT+TGG + chr1_1:4309098-4309117 Msa0002410:three_prime_UTR 50.0%
GTTGATCCCTGTCCTGTTGC+TGG + chr1_1:4299386-4299405 Msa0002410:CDS 55.0%
GGAGGGTTCAGATCAGCAGT+AGG - chr1_1:4300360-4300379 None:intergenic 55.0%
TGGGAGAAGCTTAGCTCCTG+AGG + chr1_1:4300461-4300480 Msa0002410:CDS 55.0%
TAGGAGCAAATGCCGGTGAG+AGG + chr1_1:4300535-4300554 Msa0002410:CDS 55.0%
AGGAGCAAATGCCGGTGAGA+GGG + chr1_1:4300536-4300555 Msa0002410:CDS 55.0%
CTACACCTGAGCGCAAAACC+AGG + chr1_1:4300988-4301007 Msa0002410:CDS 55.0%
ACCAGTCGAATCGACCAGTC+CGG - chr1_1:4301462-4301481 None:intergenic 55.0%
TGGGGGAAAACACTCACAGC+TGG - chr1_1:4301504-4301523 None:intergenic 55.0%
CAGTCAAGGCGTAGTACCTG+AGG + chr1_1:4302056-4302075 Msa0002410:intron 55.0%
TCAAGGCGTAGTACCTGAGG+AGG + chr1_1:4302059-4302078 Msa0002410:CDS 55.0%
GATAGCATATGGGCCTCCTC+AGG - chr1_1:4302075-4302094 None:intergenic 55.0%
GCATGTGCGAAGAAAGGGAG+TGG + chr1_1:4302329-4302348 Msa0002410:intron 55.0%
TCTGGGCTTCTAGTACCTGC+AGG - chr1_1:4302896-4302915 None:intergenic 55.0%
! TTGCTACTGGCTAGGCCAAG+AGG - chr1_1:4302965-4302984 None:intergenic 55.0%
TCTTGGCCTAGCCAGTAGCA+AGG + chr1_1:4302964-4302983 Msa0002410:CDS 55.0%
CTTGGCCTAGCCAGTAGCAA+GGG + chr1_1:4302965-4302984 Msa0002410:CDS 55.0%
! GAGTACCCTTGCTACTGGCT+AGG - chr1_1:4302973-4302992 None:intergenic 55.0%
! GGTTGGAGTACCCTTGCTAC+TGG - chr1_1:4302978-4302997 None:intergenic 55.0%
CTCCAAAGGGGAGATGACAG+AGG - chr1_1:4303019-4303038 None:intergenic 55.0%
CCAAAGCAGGACCTCTTGCA+AGG - chr1_1:4303081-4303100 None:intergenic 55.0%
CCTTGCAAGAGGTCCTGCTT+TGG + chr1_1:4303078-4303097 Msa0002410:CDS 55.0%
AGCAGTCCATGGTCCACGAA+GGG - chr1_1:4303197-4303216 None:intergenic 55.0%
AAGCAGTCCATGGTCCACGA+AGG - chr1_1:4303198-4303217 None:intergenic 55.0%
TCTGCGACAGGAGATGCAGA+AGG - chr1_1:4303253-4303272 None:intergenic 55.0%
GATATATGGCTGCTGACGGC+AGG - chr1_1:4303541-4303560 None:intergenic 55.0%
GTCCGAGGATCTTGGCAAGA+AGG + chr1_1:4303738-4303757 Msa0002410:CDS 55.0%
GGCCTTCTTGCCAAGATCCT+CGG - chr1_1:4303743-4303762 None:intergenic 55.0%
CTGATCGCCTCAAAAGTGGC+TGG + chr1_1:4303908-4303927 Msa0002410:CDS 55.0%
AGCAGCAGCTGCTGTTGCAA+AGG + chr1_1:4304131-4304150 Msa0002410:CDS 55.0%
GCACCCTTCAAGATGGAAGC+AGG - chr1_1:4304300-4304319 None:intergenic 55.0%
CTTGGTAGAAGCTGGTCCAG+AGG + chr1_1:4304515-4304534 Msa0002410:CDS 55.0%
ATGCGGAAGCAGATTGCCGT+AGG + chr1_1:4304678-4304697 Msa0002410:CDS 55.0%
GAAGCAGATTGCCGTAGGTC+AGG + chr1_1:4304683-4304702 Msa0002410:CDS 55.0%
AAACGGATCAAGGGGCCACA+AGG + chr1_1:4304803-4304822 Msa0002410:CDS 55.0%
! GACTCGGGAAGCACGTCAAT+GGG - chr1_1:4304846-4304865 None:intergenic 55.0%
! AGACTCGGGAAGCACGTCAA+TGG - chr1_1:4304847-4304866 None:intergenic 55.0%
! GCTTCCCGAGTCTGAAACAC+AGG + chr1_1:4304854-4304873 Msa0002410:CDS 55.0%
CCTGGGTTCAAACCCAGACA+AGG - chr1_1:4305452-4305471 None:intergenic 55.0%
CCTTGTCTGGGTTTGAACCC+AGG + chr1_1:4305449-4305468 Msa0002410:intron 55.0%
GTTAAGGAGTTGGGGGTCCT+GGG - chr1_1:4305469-4305488 None:intergenic 55.0%
CGAGCAGCACGAATTCTAGG+GGG - chr1_1:4305875-4305894 None:intergenic 55.0%
GCGAGTCATCCAATCGCAGT+TGG - chr1_1:4307186-4307205 None:intergenic 55.0%
CTCGCCAGTCTGTGTACATC+TGG - chr1_1:4308014-4308033 None:intergenic 55.0%
CAGATGTACACAGACTGGCG+AGG + chr1_1:4308012-4308031 Msa0002410:CDS 55.0%
ATGTCGCGGATGGGACAAGT+AGG + chr1_1:4308123-4308142 Msa0002410:CDS 55.0%
GTGGGCTTGAAGTCAGCTCT+GGG - chr1_1:4308257-4308276 None:intergenic 55.0%
! AGTGGGCTTGAAGTCAGCTC+TGG - chr1_1:4308258-4308277 None:intergenic 55.0%
AGCCCACTTCTAAGCCTGGA+AGG + chr1_1:4308270-4308289 Msa0002410:CDS 55.0%
GGCCTTCCAGGCTTAGAAGT+GGG - chr1_1:4308275-4308294 None:intergenic 55.0%
TGGCCTTCCAGGCTTAGAAG+TGG - chr1_1:4308276-4308295 None:intergenic 55.0%
AGATGCCCGTGAGGAATACG+AGG - chr1_1:4308480-4308499 None:intergenic 55.0%
TTACCCAACCTACCACCAGC+AGG - chr1_1:4308566-4308585 None:intergenic 55.0%
! TGCTGGTGGTAGGTTGGGTA+AGG + chr1_1:4308565-4308584 Msa0002410:CDS 55.0%
! GCTGGTGGTAGGTTGGGTAA+GGG + chr1_1:4308566-4308585 Msa0002410:CDS 55.0%
GCGAGTCATCCAATCGCAGT+TGG - chr1_1:4307186-4307205 None:intergenic 55.0%
AGGATGGGGAACCCTCTCAC+CGG - chr1_1:4300550-4300569 None:intergenic 60.0%
!! ACCGGACTGGTCGATTCGAC+TGG + chr1_1:4301458-4301477 Msa0002410:intron 60.0%
AGTCCATGGTCCACGAAGGG+GGG - chr1_1:4303194-4303213 None:intergenic 60.0%
CAGTCCATGGTCCACGAAGG+GGG - chr1_1:4303195-4303214 None:intergenic 60.0%
GCAGTCCATGGTCCACGAAG+GGG - chr1_1:4303196-4303215 None:intergenic 60.0%
AGTTGCAGTGGCGACAGCAG+TGG - chr1_1:4303563-4303582 None:intergenic 60.0%
GGTTAAGGAGTTGGGGGTCC+TGG - chr1_1:4305470-4305489 None:intergenic 60.0%
AAGGAGGGGGGTAGCTCAAC+TGG - chr1_1:4305504-4305523 None:intergenic 60.0%
CGAAAGAGGGCCCACTGCAT+TGG - chr1_1:4305769-4305788 None:intergenic 60.0%
TGTGGTGTGCTTTCCCCCGA+AGG - chr1_1:4306922-4306941 None:intergenic 60.0%
AAGGGATGGACGGAGAAGCC+AGG - chr1_1:4307657-4307676 None:intergenic 60.0%
GTACACAGACTGGCGAGGTC+TGG + chr1_1:4308017-4308036 Msa0002410:CDS 60.0%
GCCCGTGAGGAATACGAGGT+TGG - chr1_1:4308476-4308495 None:intergenic 60.0%
GGAAAACCTGCACCTGCTGG+TGG + chr1_1:4308551-4308570 Msa0002410:CDS 60.0%
AACCTGCACCTGCTGGTGGT+AGG + chr1_1:4308555-4308574 Msa0002410:CDS 60.0%
AACCTACCACCAGCAGGTGC+AGG - chr1_1:4308560-4308579 None:intergenic 60.0%
TGCACCTGCTGGTGGTAGGT+TGG + chr1_1:4308559-4308578 Msa0002410:CDS 60.0%
GCACCTGCTGGTGGTAGGTT+GGG + chr1_1:4308560-4308579 Msa0002410:CDS 60.0%
! TGCGATGGGCACCGTTCAGT+TGG + chr1_1:4309080-4309099 Msa0002410:three_prime_UTR 60.0%
!!! GCTCGCCTGGTTTTGCGCTC+AGG - chr1_1:4300996-4301015 None:intergenic 65.0%
ATATCCCAGCCCCCCCTTCG+TGG + chr1_1:4303181-4303200 Msa0002410:CDS 65.0%
GTCCATGGTCCACGAAGGGG+GGG - chr1_1:4303193-4303212 None:intergenic 65.0%
TGGTCCACGAAGGGGGGGCT+GGG - chr1_1:4303188-4303207 None:intergenic 70.0%
ATGGTCCACGAAGGGGGGGC+TGG - chr1_1:4303189-4303208 None:intergenic 70.0%
AGCCCCCCCTTCGTGGACCA+TGG + chr1_1:4303188-4303207 Msa0002410:CDS 70.0%
! CGAGGTTGGTCCTGCTCCCG+TGG - chr1_1:4308462-4308481 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 4299239 4309370 4299239 ID=Msa0002410;Name=Msa0002410
chr1_1 mRNA 4299239 4309370 4299239 ID=Msa0002410-mRNA-1;Parent=Msa0002410;Name=Msa0002410-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.81|0.75|1|0.81|0.75|12|483|1500
chr1_1 exon 4299239 4299641 4299239 ID=Msa0002410-mRNA-1:exon:1305;Parent=Msa0002410-mRNA-1
chr1_1 exon 4300211 4300596 4300211 ID=Msa0002410-mRNA-1:exon:1306;Parent=Msa0002410-mRNA-1
chr1_1 exon 4300867 4301315 4300867 ID=Msa0002410-mRNA-1:exon:1307;Parent=Msa0002410-mRNA-1
chr1_1 exon 4302059 4302105 4302059 ID=Msa0002410-mRNA-1:exon:1308;Parent=Msa0002410-mRNA-1
chr1_1 exon 4302900 4304947 4302900 ID=Msa0002410-mRNA-1:exon:1309;Parent=Msa0002410-mRNA-1
chr1_1 exon 4305112 4305220 4305112 ID=Msa0002410-mRNA-1:exon:1310;Parent=Msa0002410-mRNA-1
chr1_1 exon 4305921 4305999 4305921 ID=Msa0002410-mRNA-1:exon:1311;Parent=Msa0002410-mRNA-1
chr1_1 exon 4307485 4307552 4307485 ID=Msa0002410-mRNA-1:exon:1312;Parent=Msa0002410-mRNA-1
chr1_1 exon 4307627 4307742 4307627 ID=Msa0002410-mRNA-1:exon:1313;Parent=Msa0002410-mRNA-1
chr1_1 exon 4307822 4308684 4307822 ID=Msa0002410-mRNA-1:exon:1314;Parent=Msa0002410-mRNA-1
chr1_1 exon 4308866 4308962 4308866 ID=Msa0002410-mRNA-1:exon:1315;Parent=Msa0002410-mRNA-1
chr1_1 exon 4309050 4309370 4309050 ID=Msa0002410-mRNA-1:exon:1316;Parent=Msa0002410-mRNA-1
chr1_1 CDS 4299239 4299641 4299239 ID=Msa0002410-mRNA-1:cds;Parent=Msa0002410-mRNA-1
chr1_1 CDS 4300211 4300596 4300211 ID=Msa0002410-mRNA-1:cds;Parent=Msa0002410-mRNA-1
chr1_1 CDS 4300867 4301315 4300867 ID=Msa0002410-mRNA-1:cds;Parent=Msa0002410-mRNA-1
chr1_1 CDS 4302059 4302105 4302059 ID=Msa0002410-mRNA-1:cds;Parent=Msa0002410-mRNA-1
chr1_1 CDS 4302900 4304947 4302900 ID=Msa0002410-mRNA-1:cds;Parent=Msa0002410-mRNA-1
chr1_1 CDS 4305112 4305220 4305112 ID=Msa0002410-mRNA-1:cds;Parent=Msa0002410-mRNA-1
chr1_1 CDS 4305921 4305999 4305921 ID=Msa0002410-mRNA-1:cds;Parent=Msa0002410-mRNA-1
chr1_1 CDS 4307485 4307552 4307485 ID=Msa0002410-mRNA-1:cds;Parent=Msa0002410-mRNA-1
chr1_1 CDS 4307627 4307742 4307627 ID=Msa0002410-mRNA-1:cds;Parent=Msa0002410-mRNA-1
chr1_1 CDS 4307822 4308619 4307822 ID=Msa0002410-mRNA-1:cds;Parent=Msa0002410-mRNA-1
chr1_1 three_prime_UTR 4308620 4308684 4308620 ID=Msa0002410-mRNA-1:three_prime_utr;Parent=Msa0002410-mRNA-1
chr1_1 three_prime_UTR 4308866 4308962 4308866 ID=Msa0002410-mRNA-1:three_prime_utr;Parent=Msa0002410-mRNA-1
chr1_1 three_prime_UTR 4309050 4309370 4309050 ID=Msa0002410-mRNA-1:three_prime_utr;Parent=Msa0002410-mRNA-1
Gene Sequence

>Msa0002410

CTGTCCACACTTGAAGTTACAGATCACCATGAGCTTGAAAGGATGAAGCATGTTGAGTCTGCTTCTGTTGATGAAAAGGAAGACTTTGAAGCCAAAATAGATAAAGAAGCAGGTGATTCTTTTCCTGTTGGGTCTTCTGAACTGGAAGTTGATCCCTGTCCTGTTGCTGGAACTAAAAGTGAAAAAAATTCCGATAATCTGCATATTACTGCTACTAAAAAGATTGGTGAACCTCAAGAAAGACATAGTGAGGTTGATCACGAGTGCACAAAAGATTCTAGTATGGCTACTGATCTATGTGAATCAATAGAGAAACAGGGTGATGAAGTTACTGTTTCTTTTATTAAGGATGATAAGGAGGCAGTTGAAGAGCATCGTGACAAGCCATGCTCAAAATTATCCGGTTCCATATCGTCTTCTTTTCCCGATTTTCATAATGAGCTGCATGAGACTGGAGGCTGTCCTGCCAATCCTTCCTATGATAATCGTGGACCATCTGTTACATTTGGAAGCCCTCATGAAACTAAAAAGTGTGGGAATAAAGTTAAGCCTACTGCTGATCTGAACCCTCCAGTTTTTGAGTTCATTAAGATGGATGCAACAAACACATCATCTTCTAATCATGATCACAAGGGGAATGATGTATCTAAAGATGGGAGAAGCTTAGCTCCTGAGGTAGATCTAGTGGCAAATTCGTCTGAAAAAGACATTACAAATTTGACCCCAATAGGAGCAAATGCCGGTGAGAGGGTTCCCCATCCTGTTATTGCAGCCAACAAGGAATCAGTGGTTCTAGCAGAATCTCCACTGGCTTCTGAATTAGGTACTCCCAAACCCAGTGTATCTGGACATGTATCTCATGGAAGTCCACAAATACCTGATGGTGATTTAGCACGAAGTGTTTCTAAAGCTACACCTGAGCGCAAAACCAGGCGAGCACCTAATAAGACAGCCGGAAAGGAATCATCTAGAAAAGGAAGTAAAGAAAAAACTCCAGCAAGACGGTCAGAAAAAGGGGGTAGATCAACTAGTGTATCTCTGAGCCCATCATCTGGTTTCCAGTTGATGCAATCCAACGAGGCACACCAGTATTATGGGAAAATTGATTCCATCAGTACAAAGCCATTTCCAGATTTGAACACTTCTGCTGCATCTGCGTCTGTTTTGTTTCAACAGCCTTTTATGGATGTTCAGCAAGTACAACTGCGCGCACAAATATTTGTCTATGGAGCTTTGATTCAAGGCGTAGTACCTGAGGAGGCCCATATGCTATCTGCTTTTGGTGGTACTAGAAGCCCAGATTTGGCAGTTAAGCAAAGTGAACAGCAAGGAAAGGGTATCTCTTCACCTCTTGGCCTAGCCAGTAGCAAGGGTACTCCAACCACTGTAAACCCTTTTATTCCTCTGTCATCTCCCCTTTGGAGTCTACCAACTCCCTCATGTGATTCCCTGCAATCTAGTGCCCTTGCAAGAGGTCCTGCTTTGGATTATTCACAGGCGCTCACTTCTTTGTATCCTAATCAAACTCCACCACTGCGAAACTTTCTTGGGCATAATACATCTCGGATATCCCAGCCCCCCCTTCGTGGACCATGGACTGCTTCTTCTACTCCTGCACTCGATAGCAGTTCCTATCCTTCTGCATCTCCTGTCGCAGATACAGTTAAGTCCAGTTCAACAAAAGGAACTTCTGTACCTTCTTCTAGCATAAAAAATGTCCCACCTGGTCTACCAGCTTCTAATTTAGGTCTACAAAGTGTATTTCTGCCAACTACTCCTCTGTTTAATACAAACAATGCGGTGGTATCACATGCTCAACGTTCTTCTGATCCGAAGTCCAAAAAAAGGAAAAAAGTTACAACAGAGTCTGAGGATCTTGGTCAGAAGGCTATGCATTTGCAGTCCCATCTAGTAGTATCAACTCCTGCCGTCAGCAGCCATATATCCACTGCTGTCGCCACTGCAACTTCTGCTGTTAATGTGCCAGTAACTACTGTTGAAAAATCAGTTGAGCCTGTATTTCTGCCATCTACTCCTCTGTTTAGTACAAACAATGCGATGGTATCACGTGCTCAACATTCTTCTGATCCAAAGTCCAAAAAAAGGAAAAAGGTTACAACAGAGTCCGAGGATCTTGGCAAGAAGGCCATTCATTTGCAGTCCCACCTAGTATTATCGACTCCTGTCATCAGCAGCCATATATCTAATGCTTTTGCCACCGAAACCCCTGTTCTGAATGTGCCAGTAACTGCTGTGGAAAAATCAGTTCAGTCTGTATCTCCTCTATCTTTTGCTGATCGCCTCAAAAGTGGCTGGAATGTTGAGAAGAAGGTTATGTCAGACGAGTCTCTTACAAAAATTGAGGAGGCAAGGATAAATGCAGAGGAAGCTTCTGCTCTTTCTGCTGCTGCGGTGAATCATAGCATGGATATATGGAAACAGTTGGACAAGCAAAAAAATTCTGGATTGGCATCAGATGTTGAGGCCAAATTAGCTTCTGCTGCAGTTGCAGTTGCAGCAGCAGCTGCTGTTGCAAAGGCAGCAGCTGCAGCTGCCAGTGTTGCGTCAAATGCTGCACTGCAAGCAAAACTGATGGCTGATGAAGCATTGATCGTTTCTGGTCATGAGAGTTCTTGCCAAATTTATCTTTCCGAGGGTATGGGTAACTTAGGAAAAGCAACCCCTGCTTCCATCTTGAAGGGTGCAAGTGGAGCCAATAGCTCTAGCTATATTATCGGTGCTGCAAAGGAGGCTTCAAGAAGGAGTGTTGAAGCTGCCTCATTTGCCAGAAAACGAGCTGAAAATATGGATGCTATTGTGAAGGCTGCTGAGCTGGCAGCAGAAGCTGTTTCACAAGCTGGAAAGATCGTTACTATGGGCGATCCTTTGCCGTTAAGCGACTTGGTAGAAGCTGGTCCAGAGGGTTGTTGGAAAACCTTCCAAGAGTCTTCTCAGCAAGTTGGGCTATTGAAAGGCATGAGTAGAGATCTGGTGAGTGTTGACAATGTTGGAGACAGACCAGAAACCTCTCAAATGTCTAACAGAGATATCTCATCTGAGGAAATGCGGAAGCAGATTGCCGTAGGTCAGGAGTCACCCTTTCACAAGGTGCATAATGAGATGTCACTGGACCATATGAGATCAATTGATGACATTTCATCTATTATCAGCATCAATGAAAATAGTTCAAACGGATCAAGGGGCCACAAGGTTTCTAATTTAGTCAATCCCATTGACGTGCTTCCCGAGTCTGAAACACAGGCTTCTTTAACTGATGGCAATGGATTTGAAAATCGGGAGAAGAATAATATCAAAGAGGGCTCACATGTAGAGGTTTTTAAAGATGGCAAGGAATTTAAAGCAGCATGGTTCACAGCCAATATATTAAGTTTGAAGGACGGCAAAGCATATGTATGCTACAATGCTCTTGTAGCCGATGAAGGGACAAGGAAAAGACCAAGACCAGATATGGTAGATTATTGGTCCATTGGGGATAGAGTTGATGCATGGATACAAGAAAGTTGGCAGGAAGGAATTATTAAAGATAAGAAGAATAAGAAAGCTAAAACATTTACTGTTTACTTCCCAGCAAGTGGAGAAACATCAGTTTTTGATGCCTGGCTTCTCCGTCCATCCCTTATTTGGAATGATGGGAAATGGATCGAGTCTCCTAAGGTGGGAGCAAATAACAGTCCCACCAATGAGGGTGATACACCACATGAAAAACGGCCTAAATTAGGTAATTCTGCACTAGAATTAGCAAAAGGAAAAGACAAGGCTTCTAAAGGTACTGATGCTGCGGAATCAGCTAATCCCACTGAACTGAGGTTGTTGAATTTGACTGAAGATGATAAAGTGTTCAATGTTGGTAAGAGCAACAAGAATGAAAAGAAACCAGATGTACACAGACTGGCGAGGTCTGGTCTTCAAAAAGAAGGACCAAGAGTGATTTTCGGAGTTCCTAAACCGGGGAAGAATACAAAATTTATGGAAGTAAGCAAGCATTATGTCGCGGATGGGACAAGTAGGATTAATGAGGGAGGAAATGGTTCACTTAAGTTTGCAAATTCTTCAATACCGCATGCTTCAGGATCACGTAGTTGGAAAGACAGTTCAATACACGATGCTAAGGAAAAACCCAGAGCTGACTTCAAGCCCACTTCTAAGCCTGGAAGGCCACAGAACGTTTTGGGTAGAGTGATTCCATCAAAACAAAAACCTTCGTCAAACTTTCCTACCAATGATTTGACAAGTCGTAGAGAAAGGACCAAGGATACTTCAAGTCATTTCAACAGTGCATCTCAGCGTGAAAATCAGATGGAAAGGGCATCCTATTCTGAAACCACGGGAGCAGGACCAACCTCGTATTCCTCACGGGCATCTTCAACTGAATCTTATCCCACTAAAAAGCCTCCCACAGCAAGAGTAAGTAAAGGAAAACCTGCACCTGCTGGTGGTAGGTTGGGTAAGGGTGAGAAAAGGCTTCGAATGGAAATCCGGTGA
Protein sequence

>Msa0002410

LSTLEVTDHHELERMKHVESASVDEKEDFEAKIDKEAGDSFPVGSSELEVDPCPVAGTKSEKNSDNLHITATKKIGEPQERHSEVDHECTKDSSMATDLCESIEKQGDEVTVSFIKDDKEAVEEHRDKPCSKLSGSISSSFPDFHNELHETGGCPANPSYDNRGPSVTFGSPHETKKCGNKVKPTADLNPPVFEFIKMDATNTSSSNHDHKGNDVSKDGRSLAPEVDLVANSSEKDITNLTPIGANAGERVPHPVIAANKESVVLAESPLASELGTPKPSVSGHVSHGSPQIPDGDLARSVSKATPERKTRRAPNKTAGKESSRKGSKEKTPARRSEKGGRSTSVSLSPSSGFQLMQSNEAHQYYGKIDSISTKPFPDLNTSAASASVLFQQPFMDVQQVQLRAQIFVYGALIQGVVPEEAHMLSAFGGTRSPDLAVKQSEQQGKGISSPLGLASSKGTPTTVNPFIPLSSPLWSLPTPSCDSLQSSALARGPALDYSQALTSLYPNQTPPLRNFLGHNTSRISQPPLRGPWTASSTPALDSSSYPSASPVADTVKSSSTKGTSVPSSSIKNVPPGLPASNLGLQSVFLPTTPLFNTNNAVVSHAQRSSDPKSKKRKKVTTESEDLGQKAMHLQSHLVVSTPAVSSHISTAVATATSAVNVPVTTVEKSVEPVFLPSTPLFSTNNAMVSRAQHSSDPKSKKRKKVTTESEDLGKKAIHLQSHLVLSTPVISSHISNAFATETPVLNVPVTAVEKSVQSVSPLSFADRLKSGWNVEKKVMSDESLTKIEEARINAEEASALSAAAVNHSMDIWKQLDKQKNSGLASDVEAKLASAAVAVAAAAAVAKAAAAAASVASNAALQAKLMADEALIVSGHESSCQIYLSEGMGNLGKATPASILKGASGANSSSYIIGAAKEASRRSVEAASFARKRAENMDAIVKAAELAAEAVSQAGKIVTMGDPLPLSDLVEAGPEGCWKTFQESSQQVGLLKGMSRDLVSVDNVGDRPETSQMSNRDISSEEMRKQIAVGQESPFHKVHNEMSLDHMRSIDDISSIISINENSSNGSRGHKVSNLVNPIDVLPESETQASLTDGNGFENREKNNIKEGSHVEVFKDGKEFKAAWFTANILSLKDGKAYVCYNALVADEGTRKRPRPDMVDYWSIGDRVDAWIQESWQEGIIKDKKNKKAKTFTVYFPASGETSVFDAWLLRPSLIWNDGKWIESPKVGANNSPTNEGDTPHEKRPKLGNSALELAKGKDKASKGTDAAESANPTELRLLNLTEDDKVFNVGKSNKNEKKPDVHRLARSGLQKEGPRVIFGVPKPGKNTKFMEVSKHYVADGTSRINEGGNGSLKFANSSIPHASGSRSWKDSSIHDAKEKPRADFKPTSKPGRPQNVLGRVIPSKQKPSSNFPTNDLTSRRERTKDTSSHFNSASQRENQMERASYSETTGAGPTSYSSRASSTESYPTKKPPTARVSKGKPAPAGGRLGKGEKRLRMEIR*