Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029880 | XP_003590760.1 | 98.212 | 671 | 12 | 0 | 1 | 671 | 1 | 671 | 0.0 | 1355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029880 | sp|Q9SS87|SEOB_ARATH | 31.364 | 711 | 405 | 21 | 23 | 664 | 34 | 730 | 1.32e-97 | 319 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029880 | E2FKJ6 | 98.212 | 671 | 12 | 0 | 1 | 671 | 1 | 671 | 0.0 | 1355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0029880 | -0.800937 | 1.140229e-48 | -8.615850e-47 |
| Msa0002410 | Msa0029880 | 0.806810 | 6.865107e-50 | -8.615850e-47 |
| Msa0003300 | Msa0029880 | 0.800327 | 1.518104e-48 | -8.615850e-47 |
| Msa0007080 | Msa0029880 | 0.810266 | 1.255767e-50 | -8.615850e-47 |
| Msa0011500 | Msa0029880 | 0.815157 | 1.067622e-51 | -8.615850e-47 |
| Msa0012060 | Msa0029880 | 0.838597 | 2.616481e-57 | -8.615850e-47 |
| Msa0017510 | Msa0029880 | 0.841281 | 5.226389e-58 | -8.615850e-47 |
| Msa0029880 | Msa0029890 | 0.949701 | 7.460390e-108 | -8.615850e-47 |
| Msa0029880 | Msa0029900 | 0.867575 | 1.236641e-65 | -8.615850e-47 |
| Msa0029880 | Msa0029910 | 0.825799 | 3.848645e-54 | -8.615850e-47 |
| Msa0029880 | Msa0036920 | 0.823914 | 1.071552e-53 | -8.615850e-47 |
| Msa0029880 | Msa0040450 | 0.816157 | 6.390967e-52 | -8.615850e-47 |
| Msa0029880 | Msa0077120 | 0.830290 | 3.191941e-55 | -8.615850e-47 |
| Msa0029880 | Msa0077130 | 0.872908 | 2.214484e-67 | -8.615850e-47 |
| Msa0029880 | Msa0077140 | 0.951096 | 4.191344e-109 | -8.615850e-47 |
| Msa0029880 | Msa0101810 | -0.827342 | 1.649375e-54 | -8.615850e-47 |
| Msa0029880 | Msa0110970 | 0.800375 | 1.484342e-48 | -8.615850e-47 |
| Msa0029880 | Msa0112750 | 0.812048 | 5.158269e-51 | -8.615850e-47 |
| Msa0029880 | Msa0123300 | 0.835628 | 1.501847e-56 | -8.615850e-47 |
| Msa0029880 | Msa0125090 | 0.920642 | 9.873966e-88 | -8.615850e-47 |
| Msa0029880 | Msa0125100 | 0.912154 | 2.695982e-83 | -8.615850e-47 |
| Msa0029880 | Msa0125110 | 0.832104 | 1.143768e-55 | -8.615850e-47 |
| Msa0029880 | Msa0140780 | 0.817158 | 3.812160e-52 | -8.615850e-47 |
| Msa0029880 | Msa0141230 | 0.811352 | 7.310161e-51 | -8.615850e-47 |
| Msa0029880 | Msa0142200 | 0.819820 | 9.502082e-53 | -8.615850e-47 |
| Msa0029880 | Msa0143560 | 0.812152 | 4.894340e-51 | -8.615850e-47 |
| Msa0029880 | Msa0144790 | 0.806750 | 7.068919e-50 | -8.615850e-47 |
| Msa0029880 | Msa0146260 | 0.814232 | 1.711269e-51 | -8.615850e-47 |
| Msa0029880 | Msa0157290 | 0.840537 | 8.193911e-58 | -8.615850e-47 |
| Msa0029880 | Msa0169860 | 0.948614 | 6.652435e-107 | -8.615850e-47 |
| Msa0029880 | Msa0169870 | 0.954676 | 1.728931e-112 | -8.615850e-47 |
| Msa0029880 | Msa0169920 | 0.844036 | 9.692817e-59 | -8.615850e-47 |
| Msa0029880 | Msa0170090 | 0.875768 | 2.374894e-68 | -8.615850e-47 |
| Msa0029880 | Msa0188830 | 0.824095 | 9.717174e-54 | -8.615850e-47 |
| Msa0029880 | Msa0191250 | 0.822465 | 2.335031e-53 | -8.615850e-47 |
| Msa0029880 | Msa0195000 | 0.806559 | 7.754979e-50 | -8.615850e-47 |
| Msa0029880 | Msa0197660 | 0.812273 | 4.606793e-51 | -8.615850e-47 |
| Msa0029880 | Msa0200260 | 0.819930 | 8.964901e-53 | -8.615850e-47 |
| Msa0029880 | Msa0212990 | 0.803951 | 2.728203e-49 | -8.615850e-47 |
| Msa0029880 | Msa0213040 | 0.829415 | 5.213250e-55 | -8.615850e-47 |
| Msa0029880 | Msa0213520 | 0.809753 | 1.618991e-50 | -8.615850e-47 |
| Msa0029880 | Msa0215320 | -0.811262 | 7.643522e-51 | -8.615850e-47 |
| Msa0029880 | Msa0221060 | 0.801829 | 7.487022e-49 | -8.615850e-47 |
| Msa0029880 | Msa0221290 | 0.809233 | 2.093704e-50 | -8.615850e-47 |
| Msa0029880 | Msa0227470 | 0.816614 | 5.048966e-52 | -8.615850e-47 |
| Msa0029880 | Msa0234440 | 0.800137 | 1.659355e-48 | -8.615850e-47 |
| Msa0029880 | Msa0237310 | 0.839318 | 1.702383e-57 | -8.615850e-47 |
| Msa0029880 | Msa0239800 | 0.807030 | 6.168419e-50 | -8.615850e-47 |
| Msa0029880 | Msa0243100 | 0.838464 | 2.831147e-57 | -8.615850e-47 |
| Msa0029880 | Msa0245940 | 0.803184 | 3.934142e-49 | -8.615850e-47 |
| Msa0029880 | Msa0253340 | 0.825985 | 3.477354e-54 | -8.615850e-47 |
| Msa0029880 | Msa0259500 | 0.808220 | 3.447134e-50 | -8.615850e-47 |
| Msa0029880 | Msa0260810 | 0.800849 | 1.188044e-48 | -8.615850e-47 |
| Msa0029880 | Msa0261340 | 0.812967 | 3.246877e-51 | -8.615850e-47 |
| Msa0029880 | Msa0270100 | 0.818674 | 1.733122e-52 | -8.615850e-47 |
| Msa0029880 | Msa0272730 | 0.815760 | 7.839292e-52 | -8.615850e-47 |
| Msa0029880 | Msa0274730 | 0.841176 | 5.567768e-58 | -8.615850e-47 |
| Msa0029880 | Msa0281640 | 0.801291 | 9.649512e-49 | -8.615850e-47 |
| Msa0029880 | Msa0283520 | 0.802505 | 5.433436e-49 | -8.615850e-47 |
| Msa0029880 | Msa0284520 | 0.805445 | 1.330166e-49 | -8.615850e-47 |
| Msa0029880 | Msa0285450 | 0.800289 | 1.545829e-48 | -8.615850e-47 |
| Msa0029880 | Msa0287650 | 0.842172 | 3.041294e-58 | -8.615850e-47 |
| Msa0029880 | Msa0288100 | 0.801218 | 9.987212e-49 | -8.615850e-47 |
| Msa0029880 | Msa0292170 | 0.810707 | 1.008207e-50 | -8.615850e-47 |
| Msa0029880 | Msa0292930 | 0.812276 | 4.599617e-51 | -8.615850e-47 |
| Msa0029880 | Msa0305700 | 0.806454 | 8.160531e-50 | -8.615850e-47 |
| Msa0029880 | Msa0306210 | -0.808235 | 3.420907e-50 | -8.615850e-47 |
| Msa0029880 | Msa0315530 | 0.838775 | 2.353609e-57 | -8.615850e-47 |
| Msa0029880 | Msa0317510 | 0.821599 | 3.705605e-53 | -8.615850e-47 |
| Msa0029880 | Msa0322690 | 0.808063 | 3.722908e-50 | -8.615850e-47 |
| Msa0029880 | Msa0326520 | 0.807976 | 3.885592e-50 | -8.615850e-47 |
| Msa0029880 | Msa0330340 | 0.807936 | 3.961762e-50 | -8.615850e-47 |
| Msa0029880 | Msa0332000 | 0.813678 | 2.266373e-51 | -8.615850e-47 |
| Msa0029880 | Msa0338110 | 0.812612 | 3.884889e-51 | -8.615850e-47 |
| Msa0029880 | Msa0340450 | 0.830039 | 3.676127e-55 | -8.615850e-47 |
| Msa0029880 | Msa0344690 | -0.826587 | 2.499578e-54 | -8.615850e-47 |
| Msa0029880 | Msa0357340 | 0.800870 | 1.176654e-48 | -8.615850e-47 |
| Msa0029880 | Msa0362680 | 0.827521 | 1.494042e-54 | -8.615850e-47 |
| Msa0029880 | Msa0376350 | 0.802509 | 5.424252e-49 | -8.615850e-47 |
| Msa0029880 | Msa0388960 | 0.848568 | 5.640964e-60 | -8.615850e-47 |
| Msa0029880 | Msa0389340 | 0.815995 | 6.947933e-52 | -8.615850e-47 |
| Msa0029880 | Msa0395790 | 0.836134 | 1.118262e-56 | -8.615850e-47 |
| Msa0029880 | Msa0399300 | 0.800934 | 1.141753e-48 | -8.615850e-47 |
| Msa0029880 | Msa0407910 | 0.800312 | 1.529023e-48 | -8.615850e-47 |
| Msa0029880 | Msa0407920 | 0.809709 | 1.655161e-50 | -8.615850e-47 |
| Msa0029880 | Msa0410650 | 0.803390 | 3.566603e-49 | -8.615850e-47 |
| Msa0029880 | Msa0431060 | 0.811032 | 8.575260e-51 | -8.615850e-47 |
| Msa0029880 | Msa0433410 | -0.805379 | 1.373109e-49 | -8.615850e-47 |
| Msa0029880 | Msa0439970 | 0.843068 | 1.758259e-58 | -8.615850e-47 |
| Msa0029880 | Msa0452920 | 0.825342 | 4.938364e-54 | -8.615850e-47 |
| Msa0029880 | Msa0465950 | 0.802963 | 4.371938e-49 | -8.615850e-47 |
| Msa0029880 | Msa0469160 | 0.803903 | 2.790975e-49 | -8.615850e-47 |
| Msa0029880 | Msa0469940 | -0.817888 | 2.610111e-52 | -8.615850e-47 |
| Msa0029880 | Msa0477130 | -0.806406 | 8.356493e-50 | -8.615850e-47 |
| Msa0029880 | Msa0483650 | 0.825790 | 3.867849e-54 | -8.615850e-47 |
| Msa0029880 | Msa0484780 | 0.830409 | 2.985475e-55 | -8.615850e-47 |
| Msa0029880 | Msa0494670 | 0.815479 | 9.052774e-52 | -8.615850e-47 |
| Msa0029880 | Msa0495320 | 0.814898 | 1.218613e-51 | -8.615850e-47 |
| Msa0029880 | Msa0507680 | 0.809601 | 1.745312e-50 | -8.615850e-47 |
| Msa0029880 | Msa0509610 | 0.805597 | 1.236066e-49 | -8.615850e-47 |
| Msa0029880 | Msa0512230 | 0.826687 | 2.365750e-54 | -8.615850e-47 |
| Msa0029880 | Msa0512900 | 0.816509 | 5.331274e-52 | -8.615850e-47 |
| Msa0029880 | Msa0523460 | 0.846160 | 2.586414e-59 | -8.615850e-47 |
| Msa0029880 | Msa0526940 | 0.816274 | 6.016376e-52 | -8.615850e-47 |
| Msa0029880 | Msa0532970 | 0.821638 | 3.630824e-53 | -8.615850e-47 |
| Msa0029880 | Msa0555020 | 0.822257 | 2.610045e-53 | -8.615850e-47 |
| Msa0029880 | Msa0586910 | 0.819251 | 1.280992e-52 | -8.615850e-47 |
| Msa0029880 | Msa0599890 | 0.814501 | 1.491749e-51 | -8.615850e-47 |
| Msa0029880 | Msa0602240 | 0.813298 | 2.747334e-51 | -8.615850e-47 |
| Msa0029880 | Msa0602250 | 0.820680 | 6.035631e-53 | -8.615850e-47 |
| Msa0029880 | Msa0608620 | 0.805613 | 1.226651e-49 | -8.615850e-47 |
| Msa0029880 | Msa0620790 | 0.809318 | 2.007465e-50 | -8.615850e-47 |
| Msa0029880 | Msa0622650 | 0.803967 | 2.707618e-49 | -8.615850e-47 |
| Msa0029880 | Msa0626280 | 0.815728 | 7.967667e-52 | -8.615850e-47 |
| Msa0029880 | Msa0626410 | 0.812447 | 4.219884e-51 | -8.615850e-47 |
| Msa0029880 | Msa0629430 | 0.815808 | 7.645581e-52 | -8.615850e-47 |
| Msa0029880 | Msa0629450 | 0.830104 | 3.543934e-55 | -8.615850e-47 |
| Msa0029880 | Msa0641360 | 0.806829 | 6.803325e-50 | -8.615850e-47 |
| Msa0029880 | Msa0648880 | 0.835772 | 1.381155e-56 | -8.615850e-47 |
| Msa0029880 | Msa0657610 | 0.824650 | 7.194388e-54 | -8.615850e-47 |
| Msa0029880 | Msa0657970 | 0.827150 | 1.834022e-54 | -8.615850e-47 |
| Msa0029880 | Msa0658570 | 0.818870 | 1.564131e-52 | -8.615850e-47 |
| Msa0029880 | Msa0664850 | 0.831680 | 1.454817e-55 | -8.615850e-47 |
| Msa0029880 | Msa0667050 | 0.824440 | 8.062466e-54 | -8.615850e-47 |
| Msa0029880 | Msa0667780 | 0.820795 | 5.679914e-53 | -8.615850e-47 |
| Msa0029880 | Msa0667800 | 0.820897 | 5.379079e-53 | -8.615850e-47 |
| Msa0029880 | Msa0669440 | 0.811671 | 6.231114e-51 | -8.615850e-47 |
| Msa0029880 | Msa0682620 | 0.816638 | 4.988161e-52 | -8.615850e-47 |
| Msa0029880 | Msa0683510 | 0.803273 | 3.770890e-49 | -8.615850e-47 |
| Msa0029880 | Msa0685750 | 0.812668 | 3.776437e-51 | -8.615850e-47 |
| Msa0029880 | Msa0688070 | 0.835748 | 1.400669e-56 | -8.615850e-47 |
| Msa0029880 | Msa0688770 | 0.811492 | 6.814532e-51 | -8.615850e-47 |
| Msa0029880 | Msa0691380 | 0.819524 | 1.109853e-52 | -8.615850e-47 |
| Msa0029880 | Msa0693380 | 0.812337 | 4.460138e-51 | -8.615850e-47 |
| Msa0029880 | Msa0696640 | 0.806935 | 6.460866e-50 | -8.615850e-47 |
| Msa0029880 | Msa0696740 | 0.815218 | 1.034740e-51 | -8.615850e-47 |
| Msa0029880 | Msa0696770 | 0.812399 | 4.324248e-51 | -8.615850e-47 |
| Msa0029880 | Msa0698360 | 0.805956 | 1.039276e-49 | -8.615850e-47 |
| Msa0029880 | Msa0701900 | 0.806989 | 6.291747e-50 | -8.615850e-47 |
| Msa0029880 | Msa0702350 | 0.832003 | 1.211282e-55 | -8.615850e-47 |
| Msa0029880 | Msa0702570 | 0.814489 | 1.500983e-51 | -8.615850e-47 |
| Msa0029880 | Msa0702680 | 0.832331 | 1.004966e-55 | -8.615850e-47 |
| Msa0029880 | Msa0723990 | 0.810614 | 1.055962e-50 | -8.615850e-47 |
| Msa0029880 | Msa0727710 | 0.820897 | 5.381212e-53 | -8.615850e-47 |
| Msa0029880 | Msa0730270 | 0.816225 | 6.170319e-52 | -8.615850e-47 |
| Msa0029880 | Msa0744170 | -0.806519 | 7.906689e-50 | -8.615850e-47 |
| Msa0029880 | Msa0753720 | 0.801729 | 7.849404e-49 | -8.615850e-47 |
| Msa0029880 | Msa0760130 | 0.816340 | 5.816162e-52 | -8.615850e-47 |
| Msa0029880 | Msa0790510 | 0.815263 | 1.011285e-51 | -8.615850e-47 |
| Msa0029880 | Msa0806160 | 0.803745 | 3.010110e-49 | -8.615850e-47 |
| Msa0029880 | Msa0814710 | 0.803563 | 3.284246e-49 | -8.615850e-47 |
| Msa0029880 | Msa0824660 | 0.801868 | 7.348613e-49 | -8.615850e-47 |
| Msa0029880 | Msa0829620 | 0.812690 | 3.734520e-51 | -8.615850e-47 |
| Msa0029880 | Msa0838580 | 0.800418 | 1.454965e-48 | -8.615850e-47 |
| Msa0029880 | Msa0843220 | 0.800538 | 1.375120e-48 | -8.615850e-47 |
| Msa0029880 | Msa0843400 | 0.815867 | 7.417377e-52 | -8.615850e-47 |
| Msa0029880 | Msa0867890 | 0.826413 | 2.750741e-54 | -8.615850e-47 |
| Msa0029880 | Msa0868020 | 0.822568 | 2.210010e-53 | -8.615850e-47 |
| Msa0029880 | Msa0880140 | 0.837187 | 6.025617e-57 | -8.615850e-47 |
| Msa0029880 | Msa0883060 | 0.838610 | 2.596189e-57 | -8.615850e-47 |
| Msa0029880 | Msa0896750 | 0.821485 | 3.938588e-53 | -8.615850e-47 |
| Msa0029880 | Msa0900620 | 0.816882 | 4.396489e-52 | -8.615850e-47 |
| Msa0029880 | Msa0903690 | 0.819308 | 1.243098e-52 | -8.615850e-47 |
| Msa0029880 | Msa0908050 | 0.833635 | 4.761188e-56 | -8.615850e-47 |
| Msa0029880 | Msa0909120 | 0.824993 | 5.973188e-54 | -8.615850e-47 |
| Msa0029880 | Msa0909140 | 0.823722 | 1.188498e-53 | -8.615850e-47 |
| Msa0029880 | Msa0910430 | 0.834020 | 3.814613e-56 | -8.615850e-47 |
| Msa0029880 | Msa0923010 | 0.809607 | 1.740198e-50 | -8.615850e-47 |
| Msa0029880 | Msa0926890 | 0.812840 | 3.461772e-51 | -8.615850e-47 |
| Msa0029880 | Msa0933230 | 0.807961 | 3.914141e-50 | -8.615850e-47 |
| Msa0029880 | Msa0948290 | 0.835125 | 2.013083e-56 | -8.615850e-47 |
| Msa0029880 | Msa0949790 | 0.802129 | 6.495329e-49 | -8.615850e-47 |
| Msa0029880 | Msa0954550 | 0.801874 | 7.327803e-49 | -8.615850e-47 |
| Msa0029880 | Msa0964840 | 0.819769 | 9.761447e-53 | -8.615850e-47 |
| Msa0029880 | Msa0967380 | 0.810682 | 1.020708e-50 | -8.615850e-47 |
| Msa0029880 | Msa0969450 | 0.820546 | 6.477668e-53 | -8.615850e-47 |
| Msa0029880 | Msa0969520 | 0.824049 | 9.960837e-54 | -8.615850e-47 |
| Msa0029880 | Msa0971090 | 0.806587 | 7.650731e-50 | -8.615850e-47 |
| Msa0029880 | Msa0989220 | 0.806254 | 8.992265e-50 | -8.615850e-47 |
| Msa0029880 | Msa1010350 | 0.802676 | 5.009788e-49 | -8.615850e-47 |
| Msa0029880 | Msa1019000 | 0.807030 | 6.168792e-50 | -8.615850e-47 |
| Msa0029880 | Msa1019710 | 0.808368 | 3.205986e-50 | -8.615850e-47 |
| Msa0029880 | Msa1030970 | 0.832067 | 1.167565e-55 | -8.615850e-47 |
| Msa0029880 | Msa1040520 | 0.812404 | 4.313375e-51 | -8.615850e-47 |
| Msa0029880 | Msa1044420 | 0.800879 | 1.171630e-48 | -8.615850e-47 |
| Msa0029880 | Msa1068200 | -0.815574 | 8.621760e-52 | -8.615850e-47 |
| Msa0029880 | Msa1075220 | -0.824617 | 7.326494e-54 | -8.615850e-47 |
| Msa0029880 | Msa1075540 | 0.808196 | 3.487330e-50 | -8.615850e-47 |
| Msa0029880 | Msa1082500 | 0.841524 | 4.511148e-58 | -8.615850e-47 |
| Msa0029880 | Msa1085300 | 0.801662 | 8.101496e-49 | -8.615850e-47 |
| Msa0029880 | Msa1098560 | 0.810136 | 1.338931e-50 | -8.615850e-47 |
| Msa0029880 | Msa1102770 | 0.803663 | 3.131602e-49 | -8.615850e-47 |
| Msa0029880 | Msa1116130 | -0.810310 | 1.228155e-50 | -8.615850e-47 |
| Msa0029880 | Msa1124540 | -0.805056 | 1.604831e-49 | -8.615850e-47 |
| Msa0029880 | Msa1127770 | 0.829206 | 5.859075e-55 | -8.615850e-47 |
| Msa0029880 | Msa1130270 | -0.803250 | 3.812633e-49 | -8.615850e-47 |
| Msa0029880 | Msa1139000 | -0.807471 | 4.972665e-50 | -8.615850e-47 |
| Msa0029880 | Msa1144720 | -0.801116 | 1.047730e-48 | -8.615850e-47 |
| Msa0029880 | Msa1151910 | 0.824546 | 7.610989e-54 | -8.615850e-47 |
| Msa0029880 | Msa1156340 | -0.810141 | 1.336077e-50 | -8.615850e-47 |
| Msa0029880 | Msa1162550 | -0.842363 | 2.706621e-58 | -8.615850e-47 |
| Msa0029880 | Msa1166500 | -0.804522 | 2.074958e-49 | -8.615850e-47 |
| Msa0029880 | Msa1179940 | 0.803036 | 4.222973e-49 | -8.615850e-47 |
| Msa0029880 | Msa1179970 | 0.804271 | 2.340148e-49 | -8.615850e-47 |
| Msa0029880 | Msa1186060 | 0.803973 | 2.699918e-49 | -8.615850e-47 |
| Msa0029880 | Msa1193290 | 0.808375 | 3.194464e-50 | -8.615850e-47 |
| Msa0029880 | Msa1207220 | 0.815593 | 8.537348e-52 | -8.615850e-47 |
| Msa0029880 | Msa1212940 | 0.806334 | 8.651691e-50 | -8.615850e-47 |
| Msa0029880 | Msa1214880 | 0.808734 | 2.678100e-50 | -8.615850e-47 |
| Msa0029880 | Msa1220150 | 0.801077 | 1.067232e-48 | -8.615850e-47 |
| Msa0029880 | Msa1224480 | 0.836351 | 9.848961e-57 | -8.615850e-47 |
| Msa0029880 | Msa1224830 | 0.807025 | 6.182123e-50 | -8.615850e-47 |
| Msa0029880 | Msa1238930 | 0.801770 | 7.698553e-49 | -8.615850e-47 |
| Msa0029880 | Msa1242220 | 0.850152 | 2.041955e-60 | -8.615850e-47 |
| Msa0029880 | Msa1242230 | 0.801744 | 7.792836e-49 | -8.615850e-47 |
| Msa0029880 | Msa1242240 | 0.800237 | 1.583696e-48 | -8.615850e-47 |
| Msa0029880 | Msa1267610 | 0.813318 | 2.719527e-51 | -8.615850e-47 |
| Msa0029880 | Msa1267900 | 0.809118 | 2.216500e-50 | -8.615850e-47 |
| Msa0029880 | Msa1271300 | 0.816978 | 4.184366e-52 | -8.615850e-47 |
| Msa0029880 | Msa1278840 | 0.813237 | 2.834157e-51 | -8.615850e-47 |
| Msa0029880 | Msa1283860 | 0.832205 | 1.079644e-55 | -8.615850e-47 |
| Msa0029880 | Msa1284260 | 0.808601 | 2.858126e-50 | -8.615850e-47 |
| Msa0029880 | Msa1287440 | 0.849132 | 3.933969e-60 | -8.615850e-47 |
| Msa0029880 | Msa1297290 | 0.807394 | 5.163789e-50 | -8.615850e-47 |
| Msa0029880 | Msa1305190 | 0.800468 | 1.421096e-48 | -8.615850e-47 |
| Msa0029880 | Msa1305340 | 0.805248 | 1.463347e-49 | -8.615850e-47 |
| Msa0029880 | Msa1306850 | 0.805853 | 1.092296e-49 | -8.615850e-47 |
| Msa0029880 | Msa1308380 | 0.825311 | 5.023412e-54 | -8.615850e-47 |
| Msa0029880 | Msa1313150 | 0.844964 | 5.453976e-59 | -8.615850e-47 |
| Msa0029880 | Msa1318240 | 0.813298 | 2.747528e-51 | -8.615850e-47 |
| Msa0029880 | Msa1320740 | 0.817479 | 3.227664e-52 | -8.615850e-47 |
| Msa0029880 | Msa1322860 | 0.825697 | 4.069234e-54 | -8.615850e-47 |
| Msa0029880 | Msa1322890 | 0.860862 | 1.536722e-63 | -8.615850e-47 |
| Msa0029880 | Msa1324500 | 0.813597 | 2.361537e-51 | -8.615850e-47 |
| Msa0029880 | Msa1324550 | 0.812092 | 5.045803e-51 | -8.615850e-47 |
| Msa0029880 | Msa1327050 | 0.825195 | 5.350264e-54 | -8.615850e-47 |
| Msa0029880 | Msa1331000 | 0.801799 | 7.593434e-49 | -8.615850e-47 |
| Msa0029880 | Msa1332000 | 0.801968 | 7.010118e-49 | -8.615850e-47 |
| Msa0029880 | Msa1333730 | 0.805332 | 1.404924e-49 | -8.615850e-47 |
| Msa0029880 | Msa1341570 | 0.821824 | 3.287698e-53 | -8.615850e-47 |
| Msa0029880 | Msa1372760 | 0.816355 | 5.773003e-52 | -8.615850e-47 |
| Msa0029880 | Msa1374040 | 0.810893 | 9.189012e-51 | -8.615850e-47 |
| Msa0029880 | Msa1376890 | 0.810179 | 1.311129e-50 | -8.615850e-47 |
| Msa0029880 | Msa1381940 | 0.811722 | 6.073668e-51 | -8.615850e-47 |
| Msa0029880 | Msa1384350 | 0.818342 | 2.060712e-52 | -8.615850e-47 |
| Msa0029880 | Msa1385000 | 0.807790 | 4.255787e-50 | -8.615850e-47 |
| Msa0029880 | Msa1392260 | 0.832050 | 1.179427e-55 | -8.615850e-47 |
| Msa0029880 | Msa1393410 | 0.807446 | 5.036102e-50 | -8.615850e-47 |
| Msa0029880 | Msa1408620 | -0.817500 | 3.193928e-52 | -8.615850e-47 |
| Msa0029880 | Msa1423880 | 0.847416 | 1.172936e-59 | -8.615850e-47 |
| Msa0029880 | Msa1429900 | 0.817664 | 2.932434e-52 | -8.615850e-47 |
| Msa0029880 | Msa1435420 | 0.803018 | 4.257600e-49 | -8.615850e-47 |
| Msa0029880 | Msa1438250 | 0.825934 | 3.575087e-54 | -8.615850e-47 |
| Msa0029880 | Msa1451620 | -0.812473 | 4.165139e-51 | -8.615850e-47 |
| Msa0029880 | Msa1452120 | 0.807440 | 5.049884e-50 | -8.615850e-47 |
| Msa0029880 | Msa1457430 | 0.835746 | 1.402315e-56 | -8.615850e-47 |
| Msa0029880 | Msa1459050 | 0.802800 | 4.723566e-49 | -8.615850e-47 |
| Msa0029880 | Msa1460890 | 0.804835 | 1.784885e-49 | -8.615850e-47 |
| Msa0029880 | Msa1461810 | -0.801484 | 8.809764e-49 | -8.615850e-47 |
| Msa0029880 | Msa1464160 | 0.906880 | 9.237984e-81 | -8.615850e-47 |
| Msa0029880 | Msa1464940 | 0.803461 | 3.448691e-49 | -8.615850e-47 |
| Msa0029880 | Msa1466540 | 0.821716 | 3.482423e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029880 | MtrunA17_Chr1g0186841 | 98.212 | 671 | 12 | 0 | 1 | 671 | 1 | 671 | 0.0 | 1355 |
| Msa0029880 | MtrunA17_Chr1g0186851 | 59.581 | 668 | 262 | 6 | 9 | 671 | 5 | 669 | 0.0 | 820 |
| Msa0029880 | MtrunA17_Chr1g0186861 | 58.769 | 650 | 261 | 6 | 18 | 663 | 17 | 663 | 0.0 | 771 |
| Msa0029880 | MtrunA17_Chr1g0187041 | 55.988 | 668 | 286 | 6 | 1 | 664 | 1 | 664 | 0.0 | 738 |
| Msa0029880 | MtrunA17_Chr1g0186911 | 58.511 | 564 | 229 | 5 | 102 | 663 | 1 | 561 | 0.0 | 664 |
| Msa0029880 | MtrunA17_Chr1g0165791 | 38.117 | 669 | 389 | 11 | 20 | 670 | 24 | 685 | 2.21e-150 | 452 |
| Msa0029880 | MtrunA17_Chr7g0226571 | 32.182 | 724 | 417 | 19 | 1 | 663 | 1 | 711 | 7.19e-107 | 340 |
| Msa0029880 | MtrunA17_Chr1g0187001 | 33.383 | 677 | 390 | 18 | 13 | 667 | 3 | 640 | 7.21e-105 | 332 |
| Msa0029880 | MtrunA17_Chr1g0186981 | 33.526 | 692 | 389 | 21 | 6 | 668 | 19 | 668 | 1.48e-103 | 330 |
| Msa0029880 | MtrunA17_Chr8g0381301 | 32.378 | 698 | 403 | 20 | 23 | 662 | 17 | 703 | 2.61e-101 | 325 |
| Msa0029880 | MtrunA17_Chr3g0116601 | 31.322 | 696 | 413 | 18 | 19 | 661 | 21 | 704 | 1.75e-99 | 320 |
| Msa0029880 | MtrunA17_Chr1g0186991 | 32.738 | 672 | 386 | 22 | 21 | 662 | 31 | 666 | 1.60e-95 | 308 |
| Msa0029880 | MtrunA17_Chr1g0186901 | 62.069 | 87 | 31 | 1 | 18 | 102 | 17 | 103 | 8.36e-29 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029880 | AT3G01680.1 | 31.364 | 711 | 405 | 21 | 23 | 664 | 34 | 730 | 1.34e-98 | 319 |
| Msa0029880 | AT3G01670.1 | 26.234 | 709 | 431 | 21 | 23 | 661 | 134 | 820 | 3.86e-59 | 213 |
| Msa0029880 | AT3G01670.2 | 26.160 | 711 | 429 | 22 | 23 | 661 | 158 | 844 | 4.14e-59 | 214 |
| Msa0029880 | AT1G67790.1 | 23.352 | 698 | 431 | 28 | 24 | 659 | 9 | 664 | 5.30e-35 | 141 |
Find 130 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCATCATCCATTGTAAA+TGG | 0.156346 | 1_1:+55454993 | None:intergenic |
| TCTGCATTTGCACTTGAATT+TGG | 0.183170 | 1_1:-55457662 | Msa0029880:CDS |
| AAATTCCTGTTGATGTTTAC+TGG | 0.193634 | 1_1:-55457397 | Msa0029880:CDS |
| AAAACCTCGTAAGTCGATTT+TGG | 0.196977 | 1_1:-55454273 | Msa0029880:CDS |
| CACTTGAATTTGGTGAATTC+TGG | 0.203329 | 1_1:-55457652 | Msa0029880:CDS |
| TTCCATTTGATCAAGTCTTA+TGG | 0.239151 | 1_1:-55455029 | Msa0029880:CDS |
| CATTGAATTTATACTTGAAT+TGG | 0.266351 | 1_1:-55457480 | Msa0029880:CDS |
| TTGTGTCATACCTATCATTA+AGG | 0.284079 | 1_1:+55457453 | None:intergenic |
| CTTGAAATTCCTATTGTTGC+TGG | 0.287322 | 1_1:-55453977 | Msa0029880:CDS |
| TGGTCATCAGACATGGTTAA+TGG | 0.290518 | 1_1:+55458803 | None:intergenic |
| TTACTGGGTCTTGTGGTCTT+TGG | 0.296308 | 1_1:-55453829 | Msa0029880:three_prime_UTR |
| CATGTCTGATGACCAGATTT+TGG | 0.311388 | 1_1:-55458795 | Msa0029880:CDS |
| CACAAAGGTTGTTCCTGCTT+TGG | 0.316333 | 1_1:-55457435 | Msa0029880:CDS |
| TATCACTGAGCTTAATAGTT+TGG | 0.318395 | 1_1:-55457522 | Msa0029880:CDS |
| ATGAACAATACAAGATTGTT+TGG | 0.318857 | 1_1:-55455247 | Msa0029880:CDS |
| CAATGCAAATGCAAAACATT+AGG | 0.320284 | 1_1:-55453870 | Msa0029880:exon |
| AATTGGATTACCTTAATGAT+AGG | 0.331280 | 1_1:-55457463 | Msa0029880:CDS |
| ACAGGGTACCAAAGTAAGTT+TGG | 0.339438 | 1_1:-55458579 | Msa0029880:intron |
| CGAAAATTTACTTACCCATA+TGG | 0.346721 | 1_1:+55454908 | None:intergenic |
| AATGCAAATGCAAAACATTA+GGG | 0.352870 | 1_1:-55453869 | Msa0029880:exon |
| AATGTGAGGTGGAATAAAAT+TGG | 0.354807 | 1_1:+55453446 | None:intergenic |
| TATCGAATTTCTTGCGTAGC+TGG | 0.357781 | 1_1:+55455198 | None:intergenic |
| CTCAGAAGAAATTGACTTCA+AGG | 0.363511 | 1_1:+55458505 | None:intergenic |
| TTTCAGCAAAGCCACAGATT+TGG | 0.367784 | 1_1:+55457595 | None:intergenic |
| GTGGTCTTTGGTTCGAGACT+TGG | 0.370433 | 1_1:-55453817 | Msa0029880:three_prime_UTR |
| GTGGTGTAGTCTTGAAGCTT+TGG | 0.376393 | 1_1:-55453631 | Msa0029880:three_prime_UTR |
| GTAACAGTTTCTTAAGCTCT+TGG | 0.377322 | 1_1:+55456885 | None:intergenic |
| GTGGGACATTCAGAACCTTT+TGG | 0.379546 | 1_1:-55453742 | Msa0029880:three_prime_UTR |
| AGTAAATTTGATCCAAAATC+TGG | 0.381034 | 1_1:+55458783 | None:intergenic |
| TGCTGCTATTGTTACTCAGT+TGG | 0.382885 | 1_1:-55457360 | Msa0029880:CDS |
| ATGTGAAAGCTTGTTCAGTA+TGG | 0.402535 | 1_1:+55457718 | None:intergenic |
| GTTCCTCAGTTGCTTTATGA+TGG | 0.403939 | 1_1:-55456809 | Msa0029880:CDS |
| TCAAGTTCATTAATGAAGAA+TGG | 0.407316 | 1_1:-55455118 | Msa0029880:CDS |
| TTTCATCATCCATTGTAAAT+GGG | 0.417223 | 1_1:+55454994 | None:intergenic |
| CTGTGGCTGAATTTGAGAAA+TGG | 0.418335 | 1_1:-55454087 | Msa0029880:CDS |
| GATCAAGTCTTATGGAATCA+AGG | 0.421741 | 1_1:-55455021 | Msa0029880:CDS |
| TTAACCACAACATTTCCATA+TGG | 0.422661 | 1_1:-55454923 | Msa0029880:CDS |
| TGCTTGCTCCAAACTTACTT+TGG | 0.423004 | 1_1:+55458571 | None:intergenic |
| GAATTCAGAAGGACAGGAAC+TGG | 0.428024 | 1_1:-55454968 | Msa0029880:CDS |
| TCCATGGTGCTAGGACAATC+AGG | 0.433171 | 1_1:+55453929 | None:intergenic |
| GGTAACTTTCCAGCAACAAT+AGG | 0.436825 | 1_1:+55453968 | None:intergenic |
| GGTCATCAGACATGGTTAAT+GGG | 0.438624 | 1_1:+55458804 | None:intergenic |
| CAGCAACAATAGGAATTTCA+AGG | 0.438861 | 1_1:+55453978 | None:intergenic |
| ATAGTCCAGTAAACATCAAC+AGG | 0.440292 | 1_1:+55457392 | None:intergenic |
| TTCCATAAGACTTGATCAAA+TGG | 0.441990 | 1_1:+55455027 | None:intergenic |
| AGCACCACTGTTATTTCAGT+TGG | 0.443068 | 1_1:+55456857 | None:intergenic |
| CAAGTTCATTAATGAAGAAT+GGG | 0.444482 | 1_1:-55455117 | Msa0029880:CDS |
| GGATTCCAATCGTCGAAGAA+TGG | 0.446974 | 1_1:-55455226 | Msa0029880:CDS |
| TTGTGTGCAATTTCCTCACT+TGG | 0.452426 | 1_1:+55457752 | None:intergenic |
| TCTCAATCTCACCAGCTGAT+AGG | 0.452782 | 1_1:+55458831 | None:intergenic |
| AACTGGATTGTATCTGTTGT+AGG | 0.459816 | 1_1:-55454951 | Msa0029880:CDS |
| GTGAACTAAAATTCGAGATA+AGG | 0.465871 | 1_1:+55458537 | None:intergenic |
| TCGTTCCATTCTTCGACGAT+TGG | 0.466028 | 1_1:+55455221 | None:intergenic |
| GAATTGCTGCAGGCTTTGCT+AGG | 0.467942 | 1_1:+55457561 | None:intergenic |
| CTTAAGAGTACCTTTGATGA+TGG | 0.470957 | 1_1:+55458859 | None:intergenic |
| TGTGCAATTTCCTCACTTGG+TGG | 0.473616 | 1_1:+55457755 | None:intergenic |
| AAAGATGTTGTTATCAAGAA+GGG | 0.481066 | 1_1:-55454064 | Msa0029880:CDS |
| TAACCACAACATTTCCATAT+GGG | 0.489037 | 1_1:-55454922 | Msa0029880:intron |
| AAGCAAGAACTTTCCCACTA+TGG | 0.489618 | 1_1:-55457185 | Msa0029880:CDS |
| ACAAGCTTTCACATTATGAC+TGG | 0.491657 | 1_1:-55457709 | Msa0029880:CDS |
| GTTGGATCCATTCTTTGTCA+TGG | 0.491940 | 1_1:+55454389 | None:intergenic |
| TTGCATACTTAGTGAACTGT+TGG | 0.493419 | 1_1:+55454371 | None:intergenic |
| ATGAAAATCTCCATGGTGCT+AGG | 0.497376 | 1_1:+55453920 | None:intergenic |
| AGCAACTGAGGAACACCCTT+GGG | 0.498957 | 1_1:+55456818 | None:intergenic |
| CTTGAAGTCAATTTCTTCTG+AGG | 0.504447 | 1_1:-55458504 | Msa0029880:intron |
| GAAAGATGTTGTTATCAAGA+AGG | 0.504611 | 1_1:-55454065 | Msa0029880:CDS |
| AAATAAGAATTCAGAAGGAC+AGG | 0.505393 | 1_1:-55454974 | Msa0029880:CDS |
| ACGGCGGCCATGACAAAGAA+TGG | 0.505835 | 1_1:-55454396 | Msa0029880:CDS |
| CATTTGCATTGCTCTTGTTG+TGG | 0.511127 | 1_1:+55453882 | None:intergenic |
| TGAACTAAAATTCGAGATAA+GGG | 0.515629 | 1_1:+55458538 | None:intergenic |
| AAAGATACGAACCGTAGTCT+TGG | 0.515674 | 1_1:+55456781 | None:intergenic |
| CAGAATGTCGAAAACATAGC+TGG | 0.516066 | 1_1:-55455143 | Msa0029880:CDS |
| TATTAAGCTCAGTGATAGCT+TGG | 0.519222 | 1_1:+55457528 | None:intergenic |
| CAAGGCTTTCCCATTTACAA+TGG | 0.524969 | 1_1:-55455003 | Msa0029880:CDS |
| TCTGTTGTGTTGAGTGGTCA+TGG | 0.529738 | 1_1:-55454127 | Msa0029880:CDS |
| TTTGTGGTGTTTAGTCCTCA+AGG | 0.535506 | 1_1:-55455074 | Msa0029880:CDS |
| TTGTGTTGCACCTTTCCTTG+AGG | 0.539203 | 1_1:+55455059 | None:intergenic |
| TGTTTCTACTCTAGATGTCA+CGG | 0.542607 | 1_1:-55455318 | Msa0029880:CDS |
| GAAAATGTGCTTGTTCTGCT+CGG | 0.546825 | 1_1:+55454423 | None:intergenic |
| CTTAAGACTCTCCTATCAGC+TGG | 0.547460 | 1_1:-55458842 | Msa0029880:CDS |
| ATGAGTGACACGAGCAACAC+TGG | 0.552524 | 1_1:+55454012 | None:intergenic |
| GTCAACATAGAAGAGTTCAA+TGG | 0.556338 | 1_1:+55454306 | None:intergenic |
| CATTGTTGACAGTGTTGTGC+AGG | 0.556795 | 1_1:-55458678 | Msa0029880:intron |
| GCTGCAGGCTTTGCTAGGAT+CGG | 0.562793 | 1_1:+55457566 | None:intergenic |
| CAAGCTTTCACATTATGACT+GGG | 0.564097 | 1_1:-55457708 | Msa0029880:CDS |
| TGGCGTGGAACATAACCAAA+AGG | 0.564380 | 1_1:+55453727 | None:intergenic |
| CAACAGATGGTCCTTTGCTA+AGG | 0.567238 | 1_1:+55454143 | None:intergenic |
| AACTTCTTGTGTCACTACAT+CGG | 0.569484 | 1_1:+55454207 | None:intergenic |
| CAATGTGTGTTGAACGTGCA+AGG | 0.571029 | 1_1:+55458696 | None:intergenic |
| ATATGTACACTTGTGTGAAG+AGG | 0.574765 | 1_1:-55453523 | Msa0029880:three_prime_UTR |
| AAGCAACTGAGGAACACCCT+TGG | 0.576598 | 1_1:+55456817 | None:intergenic |
| TCATATGCAAGCTCCAAAGC+AGG | 0.578263 | 1_1:+55457422 | None:intergenic |
| CAAAATCTGGTCATCAGACA+TGG | 0.578319 | 1_1:+55458796 | None:intergenic |
| TGATGAAATAAGAATTCAGA+AGG | 0.583273 | 1_1:-55454979 | Msa0029880:CDS |
| TTACCCATATGGAAATGTTG+TGG | 0.584500 | 1_1:+55454919 | None:intergenic |
| AAGAGTACCTTTGATGATGG+TGG | 0.585987 | 1_1:+55458862 | None:intergenic |
| TGTGTCACTGTGGACATGTG+TGG | 0.587756 | 1_1:+55458760 | None:intergenic |
| AAAGCCACAGATTTGGCAAG+TGG | 0.592499 | 1_1:+55457602 | None:intergenic |
| GTGCAAGGGTATTCTGAGCA+AGG | 0.592657 | 1_1:+55458711 | None:intergenic |
| TGACCACTCAACACAACAGA+TGG | 0.592856 | 1_1:+55454130 | None:intergenic |
| TGATGGTGCTACCAAGACTA+CGG | 0.600087 | 1_1:-55456792 | Msa0029880:intron |
| CGCTCCAAAATCGACTTACG+AGG | 0.601393 | 1_1:+55454269 | None:intergenic |
| GGTGTTTAGTCCTCAAGGAA+AGG | 0.602732 | 1_1:-55455069 | Msa0029880:CDS |
| ACGGTCTGTCGTCAACAGAT+AGG | 0.603134 | 1_1:-55457119 | Msa0029880:intron |
| TGCAAGGGTATTCTGAGCAA+GGG | 0.608420 | 1_1:+55458712 | None:intergenic |
| GAGTAAGATGCCATGGTATG+TGG | 0.608793 | 1_1:-55455168 | Msa0029880:CDS |
| GTCATGCAAGCCACCAAGTG+AGG | 0.613274 | 1_1:-55457765 | Msa0029880:CDS |
| TGAACTCTTCTATGTTGACA+AGG | 0.614303 | 1_1:-55454302 | Msa0029880:CDS |
| ATAGCTGATGAAAATCTCCA+TGG | 0.615992 | 1_1:+55453913 | None:intergenic |
| AAGCCACAGATTTGGCAAGT+GGG | 0.620286 | 1_1:+55457603 | None:intergenic |
| ACTATGGCCACCATCATCAA+AGG | 0.622601 | 1_1:-55458869 | Msa0029880:CDS |
| AGACCCACTTGCCAAATCTG+TGG | 0.631402 | 1_1:-55457606 | Msa0029880:CDS |
| TGATCTTGTGAATAAGAGTG+TGG | 0.634353 | 1_1:-55453761 | Msa0029880:three_prime_UTR |
| AAACTTACGATTCAGTGATG+AGG | 0.634674 | 1_1:+55457333 | None:intergenic |
| TCCTGATTGTCCTAGCACCA+TGG | 0.635274 | 1_1:-55453930 | Msa0029880:CDS |
| ACATTCTGCACCACATACCA+TGG | 0.636446 | 1_1:+55455158 | None:intergenic |
| GGTTGGGCTCTCCTTAGCAA+AGG | 0.640640 | 1_1:-55454154 | Msa0029880:CDS |
| TAGACTGAGGAAGCAGATCA+CGG | 0.645853 | 1_1:-55457138 | Msa0029880:CDS |
| GATCTTGTGAATAAGAGTGT+GGG | 0.646896 | 1_1:-55453760 | Msa0029880:three_prime_UTR |
| GCTCAACGCTCAATGTGAGG+TGG | 0.654251 | 1_1:+55453435 | None:intergenic |
| GGACCATCTGTTGTGTTGAG+TGG | 0.654679 | 1_1:-55454133 | Msa0029880:CDS |
| TCTGCTTCCTCAGTCTACTG+AGG | 0.663997 | 1_1:+55457144 | None:intergenic |
| TAATGATAGGTATGACACAA+AGG | 0.667392 | 1_1:-55457450 | Msa0029880:CDS |
| TACAACAATTCTCAAAACTG+TGG | 0.669361 | 1_1:-55454104 | Msa0029880:CDS |
| AATGTGTGTTGAACGTGCAA+GGG | 0.673789 | 1_1:+55458697 | None:intergenic |
| GCACCATCATAAAGCAACTG+AGG | 0.688596 | 1_1:+55456806 | None:intergenic |
| AACTCCAACTGAAATAACAG+TGG | 0.694056 | 1_1:-55456861 | Msa0029880:CDS |
| ACATCATCCTCAGTAGACTG+AGG | 0.697742 | 1_1:-55457151 | Msa0029880:CDS |
| ATTGACTTCAAGGTGCACAG+TGG | 0.759523 | 1_1:+55458515 | None:intergenic |
| TTCTACTCTAGATGTCACGG+AGG | 0.776640 | 1_1:-55455315 | Msa0029880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAGGATATTTAATTTAA+AGG | + | chr1_1:55453741-55453760 | None:intergenic | 10.0% |
| !! | ATAATAAATAAACAAAGTAA+AGG | + | chr1_1:55455347-55455366 | None:intergenic | 10.0% |
| !!! | AAATTTCTAATATTTTTCTT+TGG | + | chr1_1:55455909-55455928 | None:intergenic | 10.0% |
| !! | CATAAAAAAAAAAAATCATA+CGG | - | chr1_1:55456241-55456260 | Msa0029880:intron | 10.0% |
| !! | TTTAATTAAAAAGTAATATG+TGG | - | chr1_1:55456400-55456419 | Msa0029880:intron | 10.0% |
| !! | TCATAACTATTATGAATTAA+AGG | + | chr1_1:55453757-55453776 | None:intergenic | 15.0% |
| !! | AATAGATACTTAAAAAGAAA+CGG | - | chr1_1:55454260-55454279 | Msa0029880:CDS | 15.0% |
| !! | TAGAAATTAACATAATAAAG+TGG | + | chr1_1:55454362-55454381 | None:intergenic | 15.0% |
| !!! | TTAACTCATATTAGTTTAAT+TGG | + | chr1_1:55454487-55454506 | None:intergenic | 15.0% |
| !! | AATATAAATTAATGCTAATG+TGG | - | chr1_1:55455421-55455440 | Msa0029880:intron | 15.0% |
| !! | TACATATATTATTTCAGATA+CGG | - | chr1_1:55455444-55455463 | Msa0029880:intron | 15.0% |
| !! | AGAAAAATATTAGAAATTTG+TGG | - | chr1_1:55455910-55455929 | Msa0029880:intron | 15.0% |
| !!! | TGCTTTTAAATATTTTTTGT+TGG | + | chr1_1:55456336-55456355 | None:intergenic | 15.0% |
| !!! | AAAATTTGTTTTAAACATGT+AGG | + | chr1_1:55456610-55456629 | None:intergenic | 15.0% |
| !! | ATAAATTCTAATGAAATTGA+TGG | - | chr1_1:55456702-55456721 | Msa0029880:intron | 15.0% |
| !! | ACAAATTAATCAAAATTAAG+AGG | + | chr1_1:55456968-55456987 | None:intergenic | 15.0% |
| !!! | TTACAATCATATTTTGATTT+TGG | - | chr1_1:55457730-55457749 | Msa0029880:CDS | 15.0% |
| !! | CGTCTTAAAAAAATATTATT+GGG | - | chr1_1:55458568-55458587 | Msa0029880:CDS | 15.0% |
| !!! | TAATAGTTATGAATTTTGAC+AGG | - | chr1_1:55453765-55453784 | Msa0029880:three_prime_UTR | 20.0% |
| !!! | AATAGTTATGAATTTTGACA+GGG | - | chr1_1:55453766-55453785 | Msa0029880:three_prime_UTR | 20.0% |
| !! | CATTGAATTTATACTTGAAT+TGG | - | chr1_1:55454882-55454901 | Msa0029880:intron | 20.0% |
| !!! | AAGAAAAGTTGATATCAATT+TGG | - | chr1_1:55456083-55456102 | Msa0029880:intron | 20.0% |
| !! | TGAATTCAACAAACTTTAAA+TGG | + | chr1_1:55456270-55456289 | None:intergenic | 20.0% |
| !!! | GATTTTTAACTTGATTACTT+TGG | + | chr1_1:55456518-55456537 | None:intergenic | 20.0% |
| !! | AAGTAATCAAGTTAAAAATC+TGG | - | chr1_1:55456518-55456537 | Msa0029880:intron | 20.0% |
| !! | GAAATTATTACTATACGAAA+AGG | - | chr1_1:55456540-55456559 | Msa0029880:intron | 20.0% |
| !!! | CCTTTTTTTCATATTTATCT+CGG | + | chr1_1:55456847-55456866 | None:intergenic | 20.0% |
| !! | CGAGATAAATATGAAAAAAA+GGG | - | chr1_1:55456845-55456864 | Msa0029880:CDS | 20.0% |
| !!! | TATTATTAGTGTTTTGTTGA+TGG | - | chr1_1:55456901-55456920 | Msa0029880:CDS | 20.0% |
| !! | TTTCATGAAATTTACATGTT+TGG | + | chr1_1:55457610-55457629 | None:intergenic | 20.0% |
| !! | GCGTCTTAAAAAAATATTAT+TGG | - | chr1_1:55458567-55458586 | Msa0029880:CDS | 20.0% |
| !!! | TCTTTATTTTACAACATAAG+TGG | + | chr1_1:55458658-55458677 | None:intergenic | 20.0% |
| ! | AGTAAATTTGATCCAAAATC+TGG | + | chr1_1:55453582-55453601 | None:intergenic | 25.0% |
| ! | TGAACTAAAATTCGAGATAA+GGG | + | chr1_1:55453827-55453846 | None:intergenic | 25.0% |
| ! | AATTGGATTACCTTAATGAT+AGG | - | chr1_1:55454899-55454918 | Msa0029880:intron | 25.0% |
| ! | AAAATGAGTACAAAACTTTG+TGG | - | chr1_1:55455679-55455698 | Msa0029880:intron | 25.0% |
| !! | TAATTTACGAAAAGTATGTG+TGG | + | chr1_1:55456586-55456605 | None:intergenic | 25.0% |
| !! | TTTTTCATATTTATCTCGGT+TGG | + | chr1_1:55456843-55456862 | None:intergenic | 25.0% |
| ! | CCGAGATAAATATGAAAAAA+AGG | - | chr1_1:55456844-55456863 | Msa0029880:CDS | 25.0% |
| ! | ATGAACAATACAAGATTGTT+TGG | - | chr1_1:55457115-55457134 | Msa0029880:intron | 25.0% |
| !! | GCAAGAAATTCGATATTTTA+AGG | - | chr1_1:55457172-55457191 | Msa0029880:CDS | 25.0% |
| ! | TCAAGTTCATTAATGAAGAA+TGG | - | chr1_1:55457244-55457263 | Msa0029880:intron | 25.0% |
| ! | CAAGTTCATTAATGAAGAAT+GGG | - | chr1_1:55457245-55457264 | Msa0029880:intron | 25.0% |
| ! | TTTCATCATCCATTGTAAAT+GGG | + | chr1_1:55457371-55457390 | None:intergenic | 25.0% |
| ! | ATTTCATCATCCATTGTAAA+TGG | + | chr1_1:55457372-55457391 | None:intergenic | 25.0% |
| ! | TGATGAAATAAGAATTCAGA+AGG | - | chr1_1:55457383-55457402 | Msa0029880:CDS | 25.0% |
| ! | TTACAAAAATGAAACTGGTT+GGG | - | chr1_1:55458192-55458211 | Msa0029880:intron | 25.0% |
| ! | AAAGATGTTGTTATCAAGAA+GGG | - | chr1_1:55458298-55458317 | Msa0029880:intron | 25.0% |
| ! | AATGCAAATGCAAAACATTA+GGG | - | chr1_1:55458493-55458512 | Msa0029880:intron | 25.0% |
| !!! | TTGACGTATTTTTATGTTAC+TGG | - | chr1_1:55458517-55458536 | Msa0029880:CDS | 25.0% |
| !!! | TGACGTATTTTTATGTTACT+GGG | - | chr1_1:55458518-55458537 | Msa0029880:CDS | 25.0% |
| ! | CTTTGTAAACCCAAAAATAA+TGG | - | chr1_1:55458679-55458698 | Msa0029880:CDS | 25.0% |
| !!! | AACACAACACCATTATTTTT+GGG | + | chr1_1:55458691-55458710 | None:intergenic | 25.0% |
| GTGAACTAAAATTCGAGATA+AGG | + | chr1_1:55453828-55453847 | None:intergenic | 30.0% | |
| !! | TGGGTATGATGTTTAAGTTT+TGG | + | chr1_1:55453944-55453963 | None:intergenic | 30.0% |
| AAACTTAAACATCATACCCA+TGG | - | chr1_1:55453944-55453963 | Msa0029880:CDS | 30.0% | |
| TATCACTGAGCTTAATAGTT+TGG | - | chr1_1:55454840-55454859 | Msa0029880:intron | 30.0% | |
| TTGTGTCATACCTATCATTA+AGG | + | chr1_1:55454912-55454931 | None:intergenic | 30.0% | |
| TAATGATAGGTATGACACAA+AGG | - | chr1_1:55454912-55454931 | Msa0029880:intron | 30.0% | |
| AAATTCCTGTTGATGTTTAC+TGG | - | chr1_1:55454965-55454984 | Msa0029880:CDS | 30.0% | |
| GTAAATTTCTCGATCTCTAA+CGG | - | chr1_1:55455269-55455288 | Msa0029880:CDS | 30.0% | |
| AGTATGATGTTACAGTTGTA+AGG | + | chr1_1:55455296-55455315 | None:intergenic | 30.0% | |
| ATTATTATGACACGTGTTTC+TGG | + | chr1_1:55455971-55455990 | None:intergenic | 30.0% | |
| AGAAACACGTGTCATAATAA+TGG | - | chr1_1:55455970-55455989 | Msa0029880:intron | 30.0% | |
| GAAACACGTGTCATAATAAT+GGG | - | chr1_1:55455971-55455990 | Msa0029880:intron | 30.0% | |
| !! | TGATTACTTTGGTGACTTTT+TGG | + | chr1_1:55456507-55456526 | None:intergenic | 30.0% |
| TAAATAGGCAAGAAGAGAAA+AGG | + | chr1_1:55456757-55456776 | None:intergenic | 30.0% | |
| ! | TGTTAGCTTAATGCTTAGAA+TGG | + | chr1_1:55456939-55456958 | None:intergenic | 30.0% |
| !! | ATTAATTTGTTAAACCGTGC+AGG | - | chr1_1:55456978-55456997 | Msa0029880:intron | 30.0% |
| CAAAAAGAAGTCTATGTTTG+TGG | - | chr1_1:55457272-55457291 | Msa0029880:intron | 30.0% | |
| TTCCATTTGATCAAGTCTTA+TGG | - | chr1_1:55457333-55457352 | Msa0029880:intron | 30.0% | |
| TTCCATAAGACTTGATCAAA+TGG | + | chr1_1:55457338-55457357 | None:intergenic | 30.0% | |
| AAATAAGAATTCAGAAGGAC+AGG | - | chr1_1:55457388-55457407 | Msa0029880:CDS | 30.0% | |
| TTAACCACAACATTTCCATA+TGG | - | chr1_1:55457439-55457458 | Msa0029880:CDS | 30.0% | |
| TAACCACAACATTTCCATAT+GGG | - | chr1_1:55457440-55457459 | Msa0029880:CDS | 30.0% | |
| CGAAAATTTACTTACCCATA+TGG | + | chr1_1:55457457-55457476 | None:intergenic | 30.0% | |
| AACATATTTCACAACTGTGA+AGG | + | chr1_1:55457488-55457507 | None:intergenic | 30.0% | |
| ! | TGTAAAGACCGTTGAATTTT+GGG | - | chr1_1:55457516-55457535 | Msa0029880:CDS | 30.0% |
| TTACAACTTCAGTAGATAGA+CGG | - | chr1_1:55457583-55457602 | Msa0029880:CDS | 30.0% | |
| ! | AACAAGCACATTTTCTTCTA+CGG | - | chr1_1:55457947-55457966 | Msa0029880:intron | 30.0% |
| !! | ATCGGTTGTTTTGTGAATTT+TGG | + | chr1_1:55458140-55458159 | None:intergenic | 30.0% |
| CTGTCTTACAAAAATGAAAC+TGG | - | chr1_1:55458187-55458206 | Msa0029880:intron | 30.0% | |
| CTTACAAAAATGAAACTGGT+TGG | - | chr1_1:55458191-55458210 | Msa0029880:intron | 30.0% | |
| TACAACAATTCTCAAAACTG+TGG | - | chr1_1:55458258-55458277 | Msa0029880:intron | 30.0% | |
| GAAAGATGTTGTTATCAAGA+AGG | - | chr1_1:55458297-55458316 | Msa0029880:intron | 30.0% | |
| CAATGCAAATGCAAAACATT+AGG | - | chr1_1:55458492-55458511 | Msa0029880:intron | 30.0% | |
| ! | CAACACAACACCATTATTTT+TGG | + | chr1_1:55458692-55458711 | None:intergenic | 30.0% |
| !!! | GTGTTGTTTTCTATGTATTG+TGG | - | chr1_1:55458706-55458725 | Msa0029880:CDS | 30.0% |
| ! | TTTTCTATGTATTGTGGTTG+TGG | - | chr1_1:55458712-55458731 | Msa0029880:CDS | 30.0% |
| AATGTGAGGTGGAATAAAAT+TGG | + | chr1_1:55458919-55458938 | None:intergenic | 30.0% | |
| CTAGCTCGTTAAAAAAGGTT+TGG | + | chr1_1:55453472-55453491 | None:intergenic | 35.0% | |
| TAGTGCTAGCTCGTTAAAAA+AGG | + | chr1_1:55453477-55453496 | None:intergenic | 35.0% | |
| ! | TTTTTAACGAGCTAGCACTA+TGG | - | chr1_1:55453477-55453496 | Msa0029880:three_prime_UTR | 35.0% |
| !! | CTTAAGAGTACCTTTGATGA+TGG | + | chr1_1:55453506-55453525 | None:intergenic | 35.0% |
| !! | CATCAAATTTTGTGTCACTG+TGG | + | chr1_1:55453615-55453634 | None:intergenic | 35.0% |
| ! | CTCAGAAGAAATTGACTTCA+AGG | + | chr1_1:55453860-55453879 | None:intergenic | 35.0% |
| CTTGAAGTCAATTTCTTCTG+AGG | - | chr1_1:55453858-55453877 | Msa0029880:exon | 35.0% | |
| ! | ATGTGAAAGCTTGTTCAGTA+TGG | + | chr1_1:55454647-55454666 | None:intergenic | 35.0% |
| ACAAGCTTTCACATTATGAC+TGG | - | chr1_1:55454653-55454672 | Msa0029880:intron | 35.0% | |
| CAAGCTTTCACATTATGACT+GGG | - | chr1_1:55454654-55454673 | Msa0029880:intron | 35.0% | |
| TCTGCATTTGCACTTGAATT+TGG | - | chr1_1:55454700-55454719 | Msa0029880:intron | 35.0% | |
| ! | CACTTGAATTTGGTGAATTC+TGG | - | chr1_1:55454710-55454729 | Msa0029880:intron | 35.0% |
| TATTAAGCTCAGTGATAGCT+TGG | + | chr1_1:55454837-55454856 | None:intergenic | 35.0% | |
| ATAGTCCAGTAAACATCAAC+AGG | + | chr1_1:55454973-55454992 | None:intergenic | 35.0% | |
| AAACTTACGATTCAGTGATG+AGG | + | chr1_1:55455032-55455051 | None:intergenic | 35.0% | |
| ! | GTTGATCTTTTGACCATAGT+GGG | + | chr1_1:55455193-55455212 | None:intergenic | 35.0% |
| ! | TGTTGATCTTTTGACCATAG+TGG | + | chr1_1:55455194-55455213 | None:intergenic | 35.0% |
| !! | AAAGGTGTTTGAATCCTCAT+CGG | + | chr1_1:55455329-55455348 | None:intergenic | 35.0% |
| GTAACAGTTTCTTAAGCTCT+TGG | + | chr1_1:55455480-55455499 | None:intergenic | 35.0% | |
| AACTCCAACTGAAATAACAG+TGG | - | chr1_1:55455501-55455520 | Msa0029880:intron | 35.0% | |
| ! | TTCGTTTCTGATTTTTCCCA+AGG | - | chr1_1:55455528-55455547 | Msa0029880:intron | 35.0% |
| ! | TCGTTTCTGATTTTTCCCAA+GGG | - | chr1_1:55455529-55455548 | Msa0029880:intron | 35.0% |
| GTGTATTATGGAGTTAGCAA+CGG | + | chr1_1:55456485-55456504 | None:intergenic | 35.0% | |
| !! | GGTGACTTTTTGGTGTATTA+TGG | + | chr1_1:55456497-55456516 | None:intergenic | 35.0% |
| GAAAAGGTAACTTCTATGCA+AGG | + | chr1_1:55456741-55456760 | None:intergenic | 35.0% | |
| AACATTAATGTCAACCTGCA+CGG | + | chr1_1:55456995-55457014 | None:intergenic | 35.0% | |
| ! | TGTTTCTACTCTAGATGTCA+CGG | - | chr1_1:55457044-55457063 | Msa0029880:intron | 35.0% |
| !! | TTTTAAGGAGTAAGATGCCA+TGG | - | chr1_1:55457187-55457206 | Msa0029880:CDS | 35.0% |
| ! | GATCAAGTCTTATGGAATCA+AGG | - | chr1_1:55457341-55457360 | Msa0029880:CDS | 35.0% |
| AACTGGATTGTATCTGTTGT+AGG | - | chr1_1:55457411-55457430 | Msa0029880:CDS | 35.0% | |
| TTACCCATATGGAAATGTTG+TGG | + | chr1_1:55457446-55457465 | None:intergenic | 35.0% | |
| ! | GGGTAAGTAAATTTTCGACT+TGG | - | chr1_1:55457460-55457479 | Msa0029880:CDS | 35.0% |
| GTTGTGAAATATGTTGTTGC+AGG | - | chr1_1:55457493-55457512 | Msa0029880:CDS | 35.0% | |
| ! | GTGTAAAGACCGTTGAATTT+TGG | - | chr1_1:55457515-55457534 | Msa0029880:CDS | 35.0% |
| GCTTCTCTCTTTAAATCTCA+CGG | - | chr1_1:55457557-55457576 | Msa0029880:CDS | 35.0% | |
| GTCTATCTACTGAAGTTGTA+AGG | + | chr1_1:55457584-55457603 | None:intergenic | 35.0% | |
| TTGCATACTTAGTGAACTGT+TGG | + | chr1_1:55457994-55458013 | None:intergenic | 35.0% | |
| GTCAACATAGAAGAGTTCAA+TGG | + | chr1_1:55458059-55458078 | None:intergenic | 35.0% | |
| TGAACTCTTCTATGTTGACA+AGG | - | chr1_1:55458060-55458079 | Msa0029880:intron | 35.0% | |
| !! | AAAACCTCGTAAGTCGATTT+TGG | - | chr1_1:55458089-55458108 | Msa0029880:intron | 35.0% |
| ! | AACTTCTTGTGTCACTACAT+CGG | + | chr1_1:55458158-55458177 | None:intergenic | 35.0% |
| CAGCAACAATAGGAATTTCA+AGG | + | chr1_1:55458387-55458406 | None:intergenic | 35.0% | |
| CTTGAAATTCCTATTGTTGC+TGG | - | chr1_1:55458385-55458404 | Msa0029880:intron | 35.0% | |
| ! | TCAGGACATTTTATAGTCTC+AGG | + | chr1_1:55458418-55458437 | None:intergenic | 35.0% |
| ATAGCTGATGAAAATCTCCA+TGG | + | chr1_1:55458452-55458471 | None:intergenic | 35.0% | |
| ! | TTTTATGTTACTGGGTCTTG+TGG | - | chr1_1:55458526-55458545 | Msa0029880:CDS | 35.0% |
| TGATCTTGTGAATAAGAGTG+TGG | - | chr1_1:55458601-55458620 | Msa0029880:intron | 35.0% | |
| ! | GATCTTGTGAATAAGAGTGT+GGG | - | chr1_1:55458602-55458621 | Msa0029880:intron | 35.0% |
| ! | ATTTTACAACATAAGTGGCG+TGG | + | chr1_1:55458653-55458672 | None:intergenic | 35.0% |
| ATATGTACACTTGTGTGAAG+AGG | - | chr1_1:55458839-55458858 | Msa0029880:CDS | 35.0% | |
| !! | AAGAGTACCTTTGATGATGG+TGG | + | chr1_1:55453503-55453522 | None:intergenic | 40.0% |
| GGTCATCAGACATGGTTAAT+GGG | + | chr1_1:55453561-55453580 | None:intergenic | 40.0% | |
| TGGTCATCAGACATGGTTAA+TGG | + | chr1_1:55453562-55453581 | None:intergenic | 40.0% | |
| CAAAATCTGGTCATCAGACA+TGG | + | chr1_1:55453569-55453588 | None:intergenic | 40.0% | |
| ! | CATGTCTGATGACCAGATTT+TGG | - | chr1_1:55453567-55453586 | Msa0029880:three_prime_UTR | 40.0% |
| AATGTGTGTTGAACGTGCAA+GGG | + | chr1_1:55453668-55453687 | None:intergenic | 40.0% | |
| ! | ACAGGGTACCAAAGTAAGTT+TGG | - | chr1_1:55453783-55453802 | Msa0029880:three_prime_UTR | 40.0% |
| TGCTTGCTCCAAACTTACTT+TGG | + | chr1_1:55453794-55453813 | None:intergenic | 40.0% | |
| TTGTGTGCAATTTCCTCACT+TGG | + | chr1_1:55454613-55454632 | None:intergenic | 40.0% | |
| TTTCAGCAAAGCCACAGATT+TGG | + | chr1_1:55454770-55454789 | None:intergenic | 40.0% | |
| !! | CGATGTTTTTGAATTGCTGC+AGG | + | chr1_1:55454814-55454833 | None:intergenic | 40.0% |
| TGCTGCTATTGTTACTCAGT+TGG | - | chr1_1:55455002-55455021 | Msa0029880:CDS | 40.0% | |
| AAGCAAGAACTTTCCCACTA+TGG | - | chr1_1:55455177-55455196 | Msa0029880:CDS | 40.0% | |
| TACTACATCTGTATCCGATG+AGG | - | chr1_1:55455312-55455331 | Msa0029880:CDS | 40.0% | |
| !! | AGCACCACTGTTATTTCAGT+TGG | + | chr1_1:55455508-55455527 | None:intergenic | 40.0% |
| ! | GTTCCTCAGTTGCTTTATGA+TGG | - | chr1_1:55455553-55455572 | Msa0029880:intron | 40.0% |
| AAAGATACGAACCGTAGTCT+TGG | + | chr1_1:55455584-55455603 | None:intergenic | 40.0% | |
| TATCGAATTTCTTGCGTAGC+TGG | + | chr1_1:55457167-55457186 | None:intergenic | 40.0% | |
| CAGAATGTCGAAAACATAGC+TGG | - | chr1_1:55457219-55457238 | Msa0029880:intron | 40.0% | |
| TTTGTGGTGTTTAGTCCTCA+AGG | - | chr1_1:55457288-55457307 | Msa0029880:intron | 40.0% | |
| CAAGGCTTTCCCATTTACAA+TGG | - | chr1_1:55457359-55457378 | Msa0029880:CDS | 40.0% | |
| GCTTCTCTCCCAAAATTCAA+CGG | + | chr1_1:55457527-55457546 | None:intergenic | 40.0% | |
| GAAAATGTGCTTGTTCTGCT+CGG | + | chr1_1:55457942-55457961 | None:intergenic | 40.0% | |
| ! | AAGCACATTTTCTTCTACGG+CGG | - | chr1_1:55457950-55457969 | Msa0029880:intron | 40.0% |
| GTTGGATCCATTCTTTGTCA+TGG | + | chr1_1:55457976-55457995 | None:intergenic | 40.0% | |
| CTGTGGCTGAATTTGAGAAA+TGG | - | chr1_1:55458275-55458294 | Msa0029880:intron | 40.0% | |
| GGTAACTTTCCAGCAACAAT+AGG | + | chr1_1:55458397-55458416 | None:intergenic | 40.0% | |
| ATGAAAATCTCCATGGTGCT+AGG | + | chr1_1:55458445-55458464 | None:intergenic | 40.0% | |
| CATTTGCATTGCTCTTGTTG+TGG | + | chr1_1:55458483-55458502 | None:intergenic | 40.0% | |
| ACTATGGCCACCATCATCAA+AGG | - | chr1_1:55453493-55453512 | Msa0029880:three_prime_UTR | 45.0% | |
| CTTAAGACTCTCCTATCAGC+TGG | - | chr1_1:55453520-55453539 | Msa0029880:three_prime_UTR | 45.0% | |
| TCTCAATCTCACCAGCTGAT+AGG | + | chr1_1:55453534-55453553 | None:intergenic | 45.0% | |
| !! | TGCAAGGGTATTCTGAGCAA+GGG | + | chr1_1:55453653-55453672 | None:intergenic | 45.0% |
| CAATGTGTGTTGAACGTGCA+AGG | + | chr1_1:55453669-55453688 | None:intergenic | 45.0% | |
| CATTGTTGACAGTGTTGTGC+AGG | - | chr1_1:55453684-55453703 | Msa0029880:three_prime_UTR | 45.0% | |
| ! | ATTGACTTCAAGGTGCACAG+TGG | + | chr1_1:55453850-55453869 | None:intergenic | 45.0% |
| TGTGCAATTTCCTCACTTGG+TGG | + | chr1_1:55454610-55454629 | None:intergenic | 45.0% | |
| AAGCCACAGATTTGGCAAGT+GGG | + | chr1_1:55454762-55454781 | None:intergenic | 45.0% | |
| AAAGCCACAGATTTGGCAAG+TGG | + | chr1_1:55454763-55454782 | None:intergenic | 45.0% | |
| CACAAAGGTTGTTCCTGCTT+TGG | - | chr1_1:55454927-55454946 | Msa0029880:CDS | 45.0% | |
| TCATATGCAAGCTCCAAAGC+AGG | + | chr1_1:55454943-55454962 | None:intergenic | 45.0% | |
| ACATCATCCTCAGTAGACTG+AGG | - | chr1_1:55455211-55455230 | Msa0029880:CDS | 45.0% | |
| TAGACTGAGGAAGCAGATCA+CGG | - | chr1_1:55455224-55455243 | Msa0029880:CDS | 45.0% | |
| GCACCATCATAAAGCAACTG+AGG | + | chr1_1:55455559-55455578 | None:intergenic | 45.0% | |
| !! | TGATGGTGCTACCAAGACTA+CGG | - | chr1_1:55455570-55455589 | Msa0029880:intron | 45.0% |
| TTCTACTCTAGATGTCACGG+AGG | - | chr1_1:55457047-55457066 | Msa0029880:intron | 45.0% | |
| GGATTCCAATCGTCGAAGAA+TGG | - | chr1_1:55457136-55457155 | Msa0029880:CDS | 45.0% | |
| TCGTTCCATTCTTCGACGAT+TGG | + | chr1_1:55457144-55457163 | None:intergenic | 45.0% | |
| GAGTAAGATGCCATGGTATG+TGG | - | chr1_1:55457194-55457213 | Msa0029880:CDS | 45.0% | |
| ACATTCTGCACCACATACCA+TGG | + | chr1_1:55457207-55457226 | None:intergenic | 45.0% | |
| GGTGTTTAGTCCTCAAGGAA+AGG | - | chr1_1:55457293-55457312 | Msa0029880:intron | 45.0% | |
| TTGTGTTGCACCTTTCCTTG+AGG | + | chr1_1:55457306-55457325 | None:intergenic | 45.0% | |
| GAATTCAGAAGGACAGGAAC+TGG | - | chr1_1:55457394-55457413 | Msa0029880:CDS | 45.0% | |
| ! | TGGGAGAGAAGCGATTTTAG+TGG | - | chr1_1:55457535-55457554 | Msa0029880:CDS | 45.0% |
| TTCTGCTCGGTCTGCATTAT+AGG | + | chr1_1:55457929-55457948 | None:intergenic | 45.0% | |
| !! | CTCGTAAGTCGATTTTGGAG+CGG | - | chr1_1:55458094-55458113 | Msa0029880:intron | 45.0% |
| CAACAGATGGTCCTTTGCTA+AGG | + | chr1_1:55458222-55458241 | None:intergenic | 45.0% | |
| TGACCACTCAACACAACAGA+TGG | + | chr1_1:55458235-55458254 | None:intergenic | 45.0% | |
| TCTGTTGTGTTGAGTGGTCA+TGG | - | chr1_1:55458235-55458254 | Msa0029880:intron | 45.0% | |
| ! | TTACTGGGTCTTGTGGTCTT+TGG | - | chr1_1:55458533-55458552 | Msa0029880:CDS | 45.0% |
| ! | GTGGGACATTCAGAACCTTT+TGG | - | chr1_1:55458620-55458639 | Msa0029880:intron | 45.0% |
| TGGCGTGGAACATAACCAAA+AGG | + | chr1_1:55458638-55458657 | None:intergenic | 45.0% | |
| ! | GTGGTGTAGTCTTGAAGCTT+TGG | - | chr1_1:55458731-55458750 | Msa0029880:CDS | 45.0% |
| !!! | ATTAATTTTATTAATTATGT+AGG | - | chr1_1:55455148-55455167 | Msa0029880:CDS | 5.0% |
| !!! | TTAATTTTATTAATTATGTA+GGG | - | chr1_1:55455149-55455168 | Msa0029880:CDS | 5.0% |
| !!! | ATATTTTATTTTTTGTTTTA+AGG | - | chr1_1:55455377-55455396 | Msa0029880:intron | 5.0% |
| !!! | TATTTTATTTTTTGTTTTAA+GGG | - | chr1_1:55455378-55455397 | Msa0029880:intron | 5.0% |
| !! | ATTTGTAAAAAAAAAAAATA+CGG | - | chr1_1:55456141-55456160 | Msa0029880:intron | 5.0% |
| !!! | AAAAAAAAAATATTTTTTGT+TGG | + | chr1_1:55456305-55456324 | None:intergenic | 5.0% |
| !! | TATTATACAAAAAATTAAAT+AGG | + | chr1_1:55456772-55456791 | None:intergenic | 5.0% |
| ! | TGTGTCACTGTGGACATGTG+TGG | + | chr1_1:55453605-55453624 | None:intergenic | 50.0% |
| !! | GTGCAAGGGTATTCTGAGCA+AGG | + | chr1_1:55453654-55453673 | None:intergenic | 50.0% |
| CTGTGTGTGAGTGTCACCAT+GGG | + | chr1_1:55453963-55453982 | None:intergenic | 50.0% | |
| AGACCCACTTGCCAAATCTG+TGG | - | chr1_1:55454756-55454775 | Msa0029880:intron | 50.0% | |
| GAATTGCTGCAGGCTTTGCT+AGG | + | chr1_1:55454804-55454823 | None:intergenic | 50.0% | |
| TCTGCTTCCTCAGTCTACTG+AGG | + | chr1_1:55455221-55455240 | None:intergenic | 50.0% | |
| ACGGTCTGTCGTCAACAGAT+AGG | - | chr1_1:55455243-55455262 | Msa0029880:CDS | 50.0% | |
| AGCAACTGAGGAACACCCTT+GGG | + | chr1_1:55455547-55455566 | None:intergenic | 50.0% | |
| AAGCAACTGAGGAACACCCT+TGG | + | chr1_1:55455548-55455567 | None:intergenic | 50.0% | |
| ! | CGCTCCAAAATCGACTTACG+AGG | + | chr1_1:55458096-55458115 | None:intergenic | 50.0% |
| GGACCATCTGTTGTGTTGAG+TGG | - | chr1_1:55458229-55458248 | Msa0029880:intron | 50.0% | |
| ATGAGTGACACGAGCAACAC+TGG | + | chr1_1:55458353-55458372 | None:intergenic | 50.0% | |
| ! | GTGGTCTTTGGTTCGAGACT+TGG | - | chr1_1:55458545-55458564 | Msa0029880:CDS | 50.0% |
| GCTGTGTGTGAGTGTCACCA+TGG | + | chr1_1:55453964-55453983 | None:intergenic | 55.0% | |
| GTCATGCAAGCCACCAAGTG+AGG | - | chr1_1:55454597-55454616 | Msa0029880:intron | 55.0% | |
| GCTGCAGGCTTTGCTAGGAT+CGG | + | chr1_1:55454799-55454818 | None:intergenic | 55.0% | |
| ACGGCGGCCATGACAAAGAA+TGG | - | chr1_1:55457966-55457985 | Msa0029880:intron | 55.0% | |
| GGTTGGGCTCTCCTTAGCAA+AGG | - | chr1_1:55458208-55458227 | Msa0029880:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 55453441 | 55458943 | 55453441 | ID=Msa0029880;Name=Msa0029880 |
| chr1_1 | mRNA | 55453441 | 55458943 | 55453441 | ID=Msa0029880-mRNA-1;Parent=Msa0029880;Name=Msa0029880-mRNA-1;_AED=0.07;_eAED=0.07;_QI=55|1|1|1|1|1|7|430|671 |
| chr1_1 | exon | 55453441 | 55454446 | 55453441 | ID=Msa0029880-mRNA-1:exon:16597;Parent=Msa0029880-mRNA-1 |
| chr1_1 | exon | 55454923 | 55455384 | 55454923 | ID=Msa0029880-mRNA-1:exon:16596;Parent=Msa0029880-mRNA-1 |
| chr1_1 | exon | 55456793 | 55456923 | 55456793 | ID=Msa0029880-mRNA-1:exon:16595;Parent=Msa0029880-mRNA-1 |
| chr1_1 | exon | 55457120 | 55457214 | 55457120 | ID=Msa0029880-mRNA-1:exon:16594;Parent=Msa0029880-mRNA-1 |
| chr1_1 | exon | 55457341 | 55457789 | 55457341 | ID=Msa0029880-mRNA-1:exon:16593;Parent=Msa0029880-mRNA-1 |
| chr1_1 | exon | 55458505 | 55458597 | 55458505 | ID=Msa0029880-mRNA-1:exon:16592;Parent=Msa0029880-mRNA-1 |
| chr1_1 | exon | 55458679 | 55458943 | 55458679 | ID=Msa0029880-mRNA-1:exon:16591;Parent=Msa0029880-mRNA-1 |
| chr1_1 | five_prime_UTR | 55458889 | 55458943 | 55458889 | ID=Msa0029880-mRNA-1:five_prime_utr;Parent=Msa0029880-mRNA-1 |
| chr1_1 | CDS | 55458679 | 55458888 | 55458679 | ID=Msa0029880-mRNA-1:cds;Parent=Msa0029880-mRNA-1 |
| chr1_1 | CDS | 55458505 | 55458597 | 55458505 | ID=Msa0029880-mRNA-1:cds;Parent=Msa0029880-mRNA-1 |
| chr1_1 | CDS | 55457341 | 55457789 | 55457341 | ID=Msa0029880-mRNA-1:cds;Parent=Msa0029880-mRNA-1 |
| chr1_1 | CDS | 55457120 | 55457214 | 55457120 | ID=Msa0029880-mRNA-1:cds;Parent=Msa0029880-mRNA-1 |
| chr1_1 | CDS | 55456793 | 55456923 | 55456793 | ID=Msa0029880-mRNA-1:cds;Parent=Msa0029880-mRNA-1 |
| chr1_1 | CDS | 55454923 | 55455384 | 55454923 | ID=Msa0029880-mRNA-1:cds;Parent=Msa0029880-mRNA-1 |
| chr1_1 | CDS | 55453871 | 55454446 | 55453871 | ID=Msa0029880-mRNA-1:cds;Parent=Msa0029880-mRNA-1 |
| chr1_1 | three_prime_UTR | 55453441 | 55453870 | 55453441 | ID=Msa0029880-mRNA-1:three_prime_utr;Parent=Msa0029880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
