Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001200 | AES89623.2 | 87.565 | 386 | 12 | 1 | 1 | 350 | 1 | 386 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001200 | sp|Q84P24|4CLL6_ARATH | 55.181 | 386 | 134 | 3 | 2 | 350 | 87 | 470 | 1.28e-145 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001200 | G7JSR6 | 87.565 | 386 | 12 | 1 | 1 | 350 | 1 | 386 | 0.0 | 676 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa1001200 | -0.811994 | 5.298675e-51 | -8.615850e-47 |
| Msa0002410 | Msa1001200 | 0.831191 | 1.920029e-55 | -8.615850e-47 |
| Msa0007080 | Msa1001200 | 0.812812 | 3.510996e-51 | -8.615850e-47 |
| Msa0012060 | Msa1001200 | 0.801113 | 1.049530e-48 | -8.615850e-47 |
| Msa0029000 | Msa1001200 | -0.806688 | 7.286022e-50 | -8.615850e-47 |
| Msa0036920 | Msa1001200 | 0.801495 | 8.766776e-49 | -8.615850e-47 |
| Msa0048000 | Msa1001200 | 0.824442 | 8.053138e-54 | -8.615850e-47 |
| Msa0051200 | Msa1001200 | 0.829174 | 5.964966e-55 | -8.615850e-47 |
| Msa0051460 | Msa1001200 | 0.837943 | 3.856098e-57 | -8.615850e-47 |
| Msa0077390 | Msa1001200 | 0.801487 | 8.799662e-49 | -8.615850e-47 |
| Msa0088550 | Msa1001200 | 0.801768 | 7.703045e-49 | -8.615850e-47 |
| Msa0101810 | Msa1001200 | -0.810406 | 1.171219e-50 | -8.615850e-47 |
| Msa0101840 | Msa1001200 | 0.819730 | 9.960534e-53 | -8.615850e-47 |
| Msa0607540 | Msa1001200 | 0.846345 | 2.302962e-59 | -8.615850e-47 |
| Msa0608620 | Msa1001200 | 0.818952 | 1.498506e-52 | -8.615850e-47 |
| Msa0610890 | Msa1001200 | 0.807679 | 4.493086e-50 | -8.615850e-47 |
| Msa0616560 | Msa1001200 | -0.813210 | 2.873012e-51 | -8.615850e-47 |
| Msa0626190 | Msa1001200 | 0.802136 | 6.474534e-49 | -8.615850e-47 |
| Msa0640380 | Msa1001200 | 0.834594 | 2.739093e-56 | -8.615850e-47 |
| Msa0641020 | Msa1001200 | 0.808305 | 3.306192e-50 | -8.615850e-47 |
| Msa0647830 | Msa1001200 | 0.844875 | 5.764081e-59 | -8.615850e-47 |
| Msa0648880 | Msa1001200 | 0.824931 | 6.177425e-54 | -8.615850e-47 |
| Msa0655990 | Msa1001200 | -0.814171 | 1.765116e-51 | -8.615850e-47 |
| Msa0657610 | Msa1001200 | 0.822529 | 2.256264e-53 | -8.615850e-47 |
| Msa0657970 | Msa1001200 | 0.803793 | 2.942240e-49 | -8.615850e-47 |
| Msa0658570 | Msa1001200 | 0.856525 | 3.032680e-62 | -8.615850e-47 |
| Msa0664850 | Msa1001200 | 0.804578 | 2.019344e-49 | -8.615850e-47 |
| Msa0667890 | Msa1001200 | 0.824423 | 8.135644e-54 | -8.615850e-47 |
| Msa0678820 | Msa1001200 | 0.829985 | 3.787689e-55 | -8.615850e-47 |
| Msa0688070 | Msa1001200 | 0.812380 | 4.365990e-51 | -8.615850e-47 |
| Msa0690440 | Msa1001200 | 0.848113 | 7.538014e-60 | -8.615850e-47 |
| Msa0692230 | Msa1001200 | 0.825507 | 4.513785e-54 | -8.615850e-47 |
| Msa0697140 | Msa1001200 | 0.802922 | 4.457392e-49 | -8.615850e-47 |
| Msa0699920 | Msa1001200 | -0.815680 | 8.167748e-52 | -8.615850e-47 |
| Msa0703490 | Msa1001200 | 0.835058 | 2.093198e-56 | -8.615850e-47 |
| Msa0715720 | Msa1001200 | 0.834677 | 2.610287e-56 | -8.615850e-47 |
| Msa0719490 | Msa1001200 | -0.813894 | 2.031892e-51 | -8.615850e-47 |
| Msa0722930 | Msa1001200 | 0.824865 | 6.401205e-54 | -8.615850e-47 |
| Msa0723140 | Msa1001200 | 0.818306 | 2.100154e-52 | -8.615850e-47 |
| Msa0723210 | Msa1001200 | 0.802697 | 4.959884e-49 | -8.615850e-47 |
| Msa0723450 | Msa1001200 | 0.804118 | 2.518790e-49 | -8.615850e-47 |
| Msa0734270 | Msa1001200 | 0.803767 | 2.979346e-49 | -8.615850e-47 |
| Msa0744170 | Msa1001200 | -0.814546 | 1.458177e-51 | -8.615850e-47 |
| Msa0766630 | Msa1001200 | 0.806570 | 7.716430e-50 | -8.615850e-47 |
| Msa0776030 | Msa1001200 | 0.828282 | 9.802828e-55 | -8.615850e-47 |
| Msa0777930 | Msa1001200 | 0.804452 | 2.145961e-49 | -8.615850e-47 |
| Msa0790510 | Msa1001200 | 0.813977 | 1.947929e-51 | -8.615850e-47 |
| Msa0802470 | Msa1001200 | -0.807068 | 6.054396e-50 | -8.615850e-47 |
| Msa0806090 | Msa1001200 | 0.814671 | 1.368300e-51 | -8.615850e-47 |
| Msa0828540 | Msa1001200 | 0.830347 | 3.091143e-55 | -8.615850e-47 |
| Msa0839330 | Msa1001200 | 0.800359 | 1.495579e-48 | -8.615850e-47 |
| Msa0124110 | Msa1001200 | 0.806841 | 6.762013e-50 | -8.615850e-47 |
| Msa0135360 | Msa1001200 | 0.801024 | 1.094262e-48 | -8.615850e-47 |
| Msa0140910 | Msa1001200 | 0.811161 | 8.039375e-51 | -8.615850e-47 |
| Msa0143920 | Msa1001200 | 0.835330 | 1.787118e-56 | -8.615850e-47 |
| Msa0165430 | Msa1001200 | 0.810531 | 1.100569e-50 | -8.615850e-47 |
| Msa0179860 | Msa1001200 | 0.820210 | 7.734592e-53 | -8.615850e-47 |
| Msa0185640 | Msa1001200 | -0.813508 | 2.470321e-51 | -8.615850e-47 |
| Msa0188830 | Msa1001200 | 0.803985 | 2.684412e-49 | -8.615850e-47 |
| Msa0191250 | Msa1001200 | 0.803719 | 3.048847e-49 | -8.615850e-47 |
| Msa0195770 | Msa1001200 | 0.813954 | 1.970482e-51 | -8.615850e-47 |
| Msa0195820 | Msa1001200 | 0.835265 | 1.855693e-56 | -8.615850e-47 |
| Msa0201070 | Msa1001200 | 0.806047 | 9.945546e-50 | -8.615850e-47 |
| Msa0201330 | Msa1001200 | 0.826583 | 2.505441e-54 | -8.615850e-47 |
| Msa0201370 | Msa1001200 | 0.802795 | 4.734455e-49 | -8.615850e-47 |
| Msa0202880 | Msa1001200 | 0.803101 | 4.092999e-49 | -8.615850e-47 |
| Msa0215320 | Msa1001200 | -0.805211 | 1.489013e-49 | -8.615850e-47 |
| Msa0217400 | Msa1001200 | 0.821744 | 3.431528e-53 | -8.615850e-47 |
| Msa0221060 | Msa1001200 | 0.831243 | 1.864486e-55 | -8.615850e-47 |
| Msa0223410 | Msa1001200 | -0.811262 | 7.643387e-51 | -8.615850e-47 |
| Msa0226250 | Msa1001200 | 0.859778 | 3.269281e-63 | -8.615850e-47 |
| Msa0234440 | Msa1001200 | 0.822856 | 1.893167e-53 | -8.615850e-47 |
| Msa0237660 | Msa1001200 | 0.813373 | 2.645354e-51 | -8.615850e-47 |
| Msa0371420 | Msa1001200 | -0.826372 | 2.813043e-54 | -8.615850e-47 |
| Msa0373930 | Msa1001200 | 0.809231 | 2.096158e-50 | -8.615850e-47 |
| Msa0376590 | Msa1001200 | 0.814938 | 1.193719e-51 | -8.615850e-47 |
| Msa0389340 | Msa1001200 | 0.825757 | 3.938221e-54 | -8.615850e-47 |
| Msa0426360 | Msa1001200 | 0.805499 | 1.296187e-49 | -8.615850e-47 |
| Msa0426400 | Msa1001200 | 0.812455 | 4.202588e-51 | -8.615850e-47 |
| Msa0438050 | Msa1001200 | 0.843801 | 1.120290e-58 | -8.615850e-47 |
| Msa0442850 | Msa1001200 | 0.806516 | 7.920770e-50 | -8.615850e-47 |
| Msa0443290 | Msa1001200 | 0.803842 | 2.873599e-49 | -8.615850e-47 |
| Msa0448550 | Msa1001200 | -0.830487 | 2.857165e-55 | -8.615850e-47 |
| Msa0458440 | Msa1001200 | 0.800309 | 1.531092e-48 | -8.615850e-47 |
| Msa0465680 | Msa1001200 | -0.853921 | 1.736016e-61 | -8.615850e-47 |
| Msa0467740 | Msa1001200 | -0.824980 | 6.014681e-54 | -8.615850e-47 |
| Msa0469940 | Msa1001200 | -0.807954 | 3.928018e-50 | -8.615850e-47 |
| Msa0475490 | Msa1001200 | 0.821962 | 3.054263e-53 | -8.615850e-47 |
| Msa0477130 | Msa1001200 | -0.801251 | 9.831623e-49 | -8.615850e-47 |
| Msa0990960 | Msa1001200 | 0.836923 | 7.040296e-57 | -8.615850e-47 |
| Msa1000020 | Msa1001200 | 0.843456 | 1.385518e-58 | -8.615850e-47 |
| Msa1001200 | Msa1001210 | 0.850567 | 1.561911e-60 | -8.615850e-47 |
| Msa1001200 | Msa1008490 | 0.814604 | 1.415752e-51 | -8.615850e-47 |
| Msa1001200 | Msa1009020 | 0.802882 | 4.543846e-49 | -8.615850e-47 |
| Msa1001200 | Msa1032430 | 0.803080 | 4.135330e-49 | -8.615850e-47 |
| Msa1001200 | Msa1037700 | -0.812427 | 4.262136e-51 | -8.615850e-47 |
| Msa1001200 | Msa1041600 | -0.805160 | 1.526544e-49 | -8.615850e-47 |
| Msa1001200 | Msa1041730 | 0.849408 | 3.297213e-60 | -8.615850e-47 |
| Msa1001200 | Msa1043920 | 0.801813 | 7.544192e-49 | -8.615850e-47 |
| Msa1001200 | Msa1054410 | 0.828279 | 9.821404e-55 | -8.615850e-47 |
| Msa1001200 | Msa1055430 | 0.836181 | 1.087788e-56 | -8.615850e-47 |
| Msa1001200 | Msa1068200 | -0.850885 | 1.271224e-60 | -8.615850e-47 |
| Msa1001200 | Msa1073070 | -0.807278 | 5.464160e-50 | -8.615850e-47 |
| Msa1001200 | Msa1075080 | -0.831380 | 1.725241e-55 | -8.615850e-47 |
| Msa1001200 | Msa1075220 | -0.852941 | 3.317521e-61 | -8.615850e-47 |
| Msa1001200 | Msa1080160 | 0.836491 | 9.071375e-57 | -8.615850e-47 |
| Msa1001200 | Msa1080790 | 0.818258 | 2.153211e-52 | -8.615850e-47 |
| Msa1001200 | Msa1082500 | 0.828545 | 8.469231e-55 | -8.615850e-47 |
| Msa1001200 | Msa1083410 | 0.856845 | 2.441901e-62 | -8.615850e-47 |
| Msa1001200 | Msa1084260 | 0.815364 | 9.603754e-52 | -8.615850e-47 |
| Msa1001200 | Msa1098560 | 0.817920 | 2.567503e-52 | -8.615850e-47 |
| Msa1001200 | Msa1100480 | 0.806121 | 9.594186e-50 | -8.615850e-47 |
| Msa1001200 | Msa1101620 | 0.819653 | 1.037256e-52 | -8.615850e-47 |
| Msa1001200 | Msa1107800 | 0.806639 | 7.461931e-50 | -8.615850e-47 |
| Msa1001200 | Msa1109520 | 0.802954 | 4.390491e-49 | -8.615850e-47 |
| Msa1001200 | Msa1116130 | -0.838979 | 2.084637e-57 | -8.615850e-47 |
| Msa1001200 | Msa1118930 | 0.817444 | 3.287025e-52 | -8.615850e-47 |
| Msa1001200 | Msa1124540 | -0.816380 | 5.698148e-52 | -8.615850e-47 |
| Msa1001200 | Msa1125080 | 0.836322 | 1.001417e-56 | -8.615850e-47 |
| Msa1001200 | Msa1128160 | 0.809062 | 2.278168e-50 | -8.615850e-47 |
| Msa1001200 | Msa1130270 | -0.814390 | 1.578900e-51 | -8.615850e-47 |
| Msa1001200 | Msa1139000 | -0.846818 | 1.710241e-59 | -8.615850e-47 |
| Msa1001200 | Msa1156340 | -0.839994 | 1.135712e-57 | -8.615850e-47 |
| Msa1001200 | Msa1162550 | -0.854700 | 1.033479e-61 | -8.615850e-47 |
| Msa1001200 | Msa1165360 | 0.811614 | 6.411547e-51 | -8.615850e-47 |
| Msa1001200 | Msa1166500 | -0.807641 | 4.576886e-50 | -8.615850e-47 |
| Msa1001200 | Msa1167220 | 0.857015 | 2.175815e-62 | -8.615850e-47 |
| Msa1001200 | Msa1170730 | 0.807194 | 5.693096e-50 | -8.615850e-47 |
| Msa1001200 | Msa1179120 | 0.812901 | 3.357757e-51 | -8.615850e-47 |
| Msa1001200 | Msa1204980 | -0.818126 | 2.306802e-52 | -8.615850e-47 |
| Msa1001200 | Msa1205010 | -0.819203 | 1.314122e-52 | -8.615850e-47 |
| Msa1001200 | Msa1205130 | 0.801838 | 7.454026e-49 | -8.615850e-47 |
| Msa1001200 | Msa1209560 | 0.821522 | 3.862140e-53 | -8.615850e-47 |
| Msa1001200 | Msa1221700 | 0.803901 | 2.794160e-49 | -8.615850e-47 |
| Msa1001200 | Msa1224480 | 0.813096 | 3.042369e-51 | -8.615850e-47 |
| Msa1001200 | Msa1228210 | 0.843490 | 1.356926e-58 | -8.615850e-47 |
| Msa1001200 | Msa1233500 | 0.803038 | 4.218301e-49 | -8.615850e-47 |
| Msa1001200 | Msa1239720 | 0.807972 | 3.891828e-50 | -8.615850e-47 |
| Msa1001200 | Msa1246040 | 0.832168 | 1.102613e-55 | -8.615850e-47 |
| Msa1001200 | Msa1247030 | 0.815202 | 1.043400e-51 | -8.615850e-47 |
| Msa1001200 | Msa1254750 | 0.825124 | 5.562871e-54 | -8.615850e-47 |
| Msa1001200 | Msa1256540 | -0.820836 | 5.556547e-53 | -8.615850e-47 |
| Msa1001200 | Msa1267610 | 0.831230 | 1.878068e-55 | -8.615850e-47 |
| Msa1001200 | Msa1271200 | 0.812772 | 3.584008e-51 | -8.615850e-47 |
| Msa1001200 | Msa1271280 | 0.811086 | 8.344830e-51 | -8.615850e-47 |
| Msa1001200 | Msa1271300 | 0.847789 | 9.257983e-60 | -8.615850e-47 |
| Msa1001200 | Msa1278840 | 0.807043 | 6.129177e-50 | -8.615850e-47 |
| Msa1001200 | Msa1283860 | 0.806719 | 7.175219e-50 | -8.615850e-47 |
| Msa1001200 | Msa1288340 | 0.851044 | 1.146693e-60 | -8.615850e-47 |
| Msa1001200 | Msa1296960 | -0.821089 | 4.858818e-53 | -8.615850e-47 |
| Msa1001200 | Msa1298260 | 0.822105 | 2.829644e-53 | -8.615850e-47 |
| Msa1001200 | Msa1308380 | 0.811549 | 6.622632e-51 | -8.615850e-47 |
| Msa1001200 | Msa1308590 | 0.812185 | 4.815069e-51 | -8.615850e-47 |
| Msa1001200 | Msa1308640 | 0.818442 | 1.956488e-52 | -8.615850e-47 |
| Msa1001200 | Msa1322890 | 0.808234 | 3.422864e-50 | -8.615850e-47 |
| Msa1001200 | Msa1335770 | 0.806258 | 8.974938e-50 | -8.615850e-47 |
| Msa1001200 | Msa1357530 | 0.809246 | 2.080578e-50 | -8.615850e-47 |
| Msa1001200 | Msa1365040 | -0.802627 | 5.128898e-49 | -8.615850e-47 |
| Msa1001200 | Msa1376890 | 0.846865 | 1.660768e-59 | -8.615850e-47 |
| Msa1001200 | Msa1377070 | 0.831874 | 1.303667e-55 | -8.615850e-47 |
| Msa1001200 | Msa1384350 | 0.838675 | 2.497898e-57 | -8.615850e-47 |
| Msa1001200 | Msa1390050 | 0.811819 | 5.784883e-51 | -8.615850e-47 |
| Msa1001200 | Msa1392260 | 0.823161 | 1.607393e-53 | -8.615850e-47 |
| Msa1001200 | Msa1393040 | 0.803414 | 3.525924e-49 | -8.615850e-47 |
| Msa1001200 | Msa1394540 | 0.816206 | 6.231705e-52 | -8.615850e-47 |
| Msa1001200 | Msa1401530 | 0.802075 | 6.662579e-49 | -8.615850e-47 |
| Msa1001200 | Msa1404540 | 0.811265 | 7.633774e-51 | -8.615850e-47 |
| Msa1001200 | Msa1420290 | 0.800500 | 1.400194e-48 | -8.615850e-47 |
| Msa1001200 | Msa1423880 | 0.807937 | 3.959652e-50 | -8.615850e-47 |
| Msa1001200 | Msa1431060 | 0.801220 | 9.978586e-49 | -8.615850e-47 |
| Msa1001200 | Msa1431430 | 0.810407 | 1.170486e-50 | -8.615850e-47 |
| Msa1001200 | Msa1451620 | -0.850350 | 1.797673e-60 | -8.615850e-47 |
| Msa1001200 | Msa1454120 | 0.819509 | 1.119068e-52 | -8.615850e-47 |
| Msa1001200 | Msa1454860 | 0.815808 | 7.646557e-52 | -8.615850e-47 |
| Msa1001200 | Msa1457670 | -0.814100 | 1.829543e-51 | -8.615850e-47 |
| Msa1001200 | Msa1458550 | 0.804423 | 2.175737e-49 | -8.615850e-47 |
| Msa1001200 | Msa1461810 | -0.808295 | 3.322612e-50 | -8.615850e-47 |
| Msa1001200 | Msa1464940 | 0.807688 | 4.473068e-50 | -8.615850e-47 |
| Msa1001200 | Msa1466810 | 0.826287 | 2.947145e-54 | -8.615850e-47 |
| Msa0243910 | Msa1001200 | 0.806432 | 8.248699e-50 | -8.615850e-47 |
| Msa0243930 | Msa1001200 | 0.830556 | 2.748374e-55 | -8.615850e-47 |
| Msa0245980 | Msa1001200 | 0.800201 | 1.610506e-48 | -8.615850e-47 |
| Msa0257250 | Msa1001200 | 0.809635 | 1.716298e-50 | -8.615850e-47 |
| Msa0260270 | Msa1001200 | -0.806009 | 1.012802e-49 | -8.615850e-47 |
| Msa0260810 | Msa1001200 | 0.827003 | 1.988699e-54 | -8.615850e-47 |
| Msa0262520 | Msa1001200 | 0.846541 | 2.036123e-59 | -8.615850e-47 |
| Msa0266000 | Msa1001200 | -0.849985 | 2.275410e-60 | -8.615850e-47 |
| Msa0270100 | Msa1001200 | 0.803855 | 2.856339e-49 | -8.615850e-47 |
| Msa0272730 | Msa1001200 | 0.834133 | 3.574258e-56 | -8.615850e-47 |
| Msa0282590 | Msa1001200 | 0.837739 | 4.350509e-57 | -8.615850e-47 |
| Msa0290650 | Msa1001200 | 0.809411 | 1.917758e-50 | -8.615850e-47 |
| Msa0294950 | Msa1001200 | 0.844691 | 6.463116e-59 | -8.615850e-47 |
| Msa0294960 | Msa1001200 | 0.828366 | 9.358131e-55 | -8.615850e-47 |
| Msa0296560 | Msa1001200 | 0.827467 | 1.539246e-54 | -8.615850e-47 |
| Msa0297960 | Msa1001200 | 0.823621 | 1.255098e-53 | -8.615850e-47 |
| Msa0304740 | Msa1001200 | 0.842474 | 2.529497e-58 | -8.615850e-47 |
| Msa0306210 | Msa1001200 | -0.804551 | 2.045609e-49 | -8.615850e-47 |
| Msa0315730 | Msa1001200 | 0.819264 | 1.272722e-52 | -8.615850e-47 |
| Msa0331590 | Msa1001200 | 0.852147 | 5.587554e-61 | -8.615850e-47 |
| Msa0331920 | Msa1001200 | 0.857084 | 2.076455e-62 | -8.615850e-47 |
| Msa0333720 | Msa1001200 | -0.818238 | 2.175945e-52 | -8.615850e-47 |
| Msa0338110 | Msa1001200 | 0.845312 | 4.393786e-59 | -8.615850e-47 |
| Msa0342340 | Msa1001200 | -0.822394 | 2.424957e-53 | -8.615850e-47 |
| Msa0344690 | Msa1001200 | -0.810136 | 1.338982e-50 | -8.615850e-47 |
| Msa0354800 | Msa1001200 | -0.812634 | 3.841222e-51 | -8.615850e-47 |
| Msa0356890 | Msa1001200 | -0.806844 | 6.752928e-50 | -8.615850e-47 |
| Msa0362740 | Msa1001200 | 0.826043 | 3.367916e-54 | -8.615850e-47 |
| Msa0483650 | Msa1001200 | 0.810224 | 1.281956e-50 | -8.615850e-47 |
| Msa0484780 | Msa1001200 | 0.814689 | 1.355760e-51 | -8.615850e-47 |
| Msa0492870 | Msa1001200 | 0.809584 | 1.760798e-50 | -8.615850e-47 |
| Msa0498220 | Msa1001200 | 0.813215 | 2.865705e-51 | -8.615850e-47 |
| Msa0514130 | Msa1001200 | -0.823727 | 1.185507e-53 | -8.615850e-47 |
| Msa0516370 | Msa1001200 | 0.808935 | 2.425213e-50 | -8.615850e-47 |
| Msa0524890 | Msa1001200 | -0.825179 | 5.397606e-54 | -8.615850e-47 |
| Msa0528970 | Msa1001200 | 0.812059 | 5.127949e-51 | -8.615850e-47 |
| Msa0532810 | Msa1001200 | -0.820640 | 6.165517e-53 | -8.615850e-47 |
| Msa0543900 | Msa1001200 | 0.827557 | 1.465282e-54 | -8.615850e-47 |
| Msa0548280 | Msa1001200 | -0.807865 | 4.101350e-50 | -8.615850e-47 |
| Msa0553460 | Msa1001200 | 0.853198 | 2.800553e-61 | -8.615850e-47 |
| Msa0555020 | Msa1001200 | 0.833929 | 4.021352e-56 | -8.615850e-47 |
| Msa0558690 | Msa1001200 | 0.805471 | 1.313582e-49 | -8.615850e-47 |
| Msa0564510 | Msa1001200 | 0.834583 | 2.756643e-56 | -8.615850e-47 |
| Msa0567020 | Msa1001200 | 0.834796 | 2.436725e-56 | -8.615850e-47 |
| Msa0599770 | Msa1001200 | 0.832826 | 7.572711e-56 | -8.615850e-47 |
| Msa0599890 | Msa1001200 | 0.817967 | 2.505476e-52 | -8.615850e-47 |
| Msa0843280 | Msa1001200 | 0.828302 | 9.692924e-55 | -8.615850e-47 |
| Msa0843780 | Msa1001200 | -0.809183 | 2.146261e-50 | -8.615850e-47 |
| Msa0844900 | Msa1001200 | 0.810071 | 1.383033e-50 | -8.615850e-47 |
| Msa0867890 | Msa1001200 | 0.807441 | 5.048410e-50 | -8.615850e-47 |
| Msa0868020 | Msa1001200 | 0.809079 | 2.259150e-50 | -8.615850e-47 |
| Msa0870530 | Msa1001200 | 0.806738 | 7.108975e-50 | -8.615850e-47 |
| Msa0876850 | Msa1001200 | -0.809939 | 1.476955e-50 | -8.615850e-47 |
| Msa0885280 | Msa1001200 | 0.804129 | 2.504836e-49 | -8.615850e-47 |
| Msa0886330 | Msa1001200 | -0.848128 | 7.466157e-60 | -8.615850e-47 |
| Msa0891040 | Msa1001200 | 0.829432 | 5.166218e-55 | -8.615850e-47 |
| Msa0894500 | Msa1001200 | 0.801143 | 1.034820e-48 | -8.615850e-47 |
| Msa0900200 | Msa1001200 | 0.830489 | 2.852960e-55 | -8.615850e-47 |
| Msa0903700 | Msa1001200 | 0.800740 | 1.250886e-48 | -8.615850e-47 |
| Msa0942080 | Msa1001200 | -0.805230 | 1.475511e-49 | -8.615850e-47 |
| Msa0946120 | Msa1001200 | 0.844739 | 6.273898e-59 | -8.615850e-47 |
| Msa0951720 | Msa1001200 | 0.823667 | 1.224053e-53 | -8.615850e-47 |
| Msa0961420 | Msa1001200 | -0.818797 | 1.625024e-52 | -8.615850e-47 |
| Msa0965520 | Msa1001200 | 0.842639 | 2.287194e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001200 | MtrunA17_Chr4g0039791 | 87.565 | 386 | 12 | 1 | 1 | 350 | 84 | 469 | 0.0 | 676 |
| Msa1001200 | MtrunA17_Chr5g0409791 | 70.603 | 398 | 67 | 2 | 1 | 350 | 81 | 476 | 0.0 | 563 |
| Msa1001200 | MtrunA17_Chr5g0409771 | 71.429 | 385 | 72 | 2 | 1 | 349 | 80 | 462 | 0.0 | 553 |
| Msa1001200 | MtrunA17_Chr1g0157401 | 39.286 | 392 | 191 | 6 | 1 | 349 | 80 | 467 | 3.77e-91 | 283 |
| Msa1001200 | MtrunA17_Chr8g0353341 | 39.698 | 398 | 187 | 6 | 1 | 349 | 77 | 470 | 8.99e-91 | 282 |
| Msa1001200 | MtrunA17_Chr1g0197391 | 39.793 | 387 | 189 | 8 | 1 | 350 | 95 | 474 | 3.95e-77 | 248 |
| Msa1001200 | MtrunA17_Chr3g0116251 | 36.512 | 367 | 203 | 5 | 10 | 349 | 100 | 463 | 2.51e-75 | 243 |
| Msa1001200 | MtrunA17_Chr4g0028411 | 36.761 | 389 | 202 | 7 | 1 | 350 | 67 | 450 | 2.46e-74 | 239 |
| Msa1001200 | MtrunA17_Chr3g0116271 | 37.634 | 372 | 195 | 8 | 10 | 349 | 99 | 465 | 2.89e-74 | 240 |
| Msa1001200 | MtrunA17_Chr2g0327341 | 35.219 | 389 | 205 | 6 | 1 | 350 | 67 | 447 | 3.04e-69 | 226 |
| Msa1001200 | MtrunA17_Chr1g0180551 | 35.641 | 390 | 198 | 6 | 9 | 350 | 145 | 529 | 2.95e-68 | 225 |
| Msa1001200 | MtrunA17_Chr1g0180541 | 34.177 | 395 | 209 | 7 | 1 | 350 | 68 | 456 | 8.11e-63 | 209 |
| Msa1001200 | MtrunA17_Chr1g0186071 | 34.817 | 382 | 205 | 10 | 1 | 350 | 95 | 464 | 3.78e-60 | 202 |
| Msa1001200 | MtrunA17_Chr4g0000461 | 36.761 | 389 | 203 | 10 | 1 | 350 | 65 | 449 | 8.59e-57 | 193 |
| Msa1001200 | MtrunA17_Chr5g0395431 | 34.536 | 388 | 213 | 9 | 1 | 349 | 109 | 494 | 4.79e-56 | 192 |
| Msa1001200 | MtrunA17_Chr4g0072561 | 34.848 | 396 | 202 | 10 | 1 | 350 | 71 | 456 | 8.68e-56 | 191 |
| Msa1001200 | MtrunA17_Chr3g0102411 | 32.558 | 387 | 217 | 9 | 2 | 350 | 69 | 449 | 2.30e-53 | 184 |
| Msa1001200 | MtrunA17_Chr1g0157431 | 34.545 | 275 | 133 | 6 | 1 | 232 | 80 | 350 | 1.80e-42 | 155 |
| Msa1001200 | MtrunA17_Chr2g0334131 | 43.229 | 192 | 105 | 3 | 162 | 350 | 1 | 191 | 6.88e-42 | 147 |
| Msa1001200 | MtrunA17_Chr6g0471921 | 28.325 | 406 | 207 | 17 | 2 | 350 | 45 | 423 | 6.05e-25 | 105 |
| Msa1001200 | MtrunA17_Chr5g0433241 | 31.128 | 257 | 148 | 11 | 100 | 342 | 203 | 444 | 9.86e-21 | 93.6 |
| Msa1001200 | MtrunA17_Chr6g0471311 | 29.167 | 264 | 163 | 7 | 100 | 351 | 205 | 456 | 2.08e-20 | 92.4 |
| Msa1001200 | MtrunA17_Chr3g0109731 | 28.205 | 273 | 156 | 9 | 100 | 351 | 203 | 456 | 1.14e-19 | 90.5 |
| Msa1001200 | MtrunA17_Chr3g0124631 | 34.810 | 158 | 90 | 6 | 195 | 345 | 414 | 565 | 9.95e-16 | 78.6 |
| Msa1001200 | MtrunA17_Chr1g0205711 | 27.740 | 292 | 149 | 10 | 100 | 343 | 274 | 551 | 1.62e-15 | 77.8 |
| Msa1001200 | MtrunA17_Chr2g0292471 | 24.221 | 417 | 236 | 12 | 1 | 346 | 40 | 447 | 1.95e-15 | 77.4 |
| Msa1001200 | MtrunA17_Chr1g0160041 | 37.143 | 140 | 78 | 5 | 213 | 345 | 427 | 563 | 2.27e-15 | 77.4 |
| Msa1001200 | MtrunA17_Chr3g0121931 | 38.194 | 144 | 81 | 4 | 184 | 323 | 423 | 562 | 4.73e-15 | 76.6 |
| Msa1001200 | MtrunA17_Chr3g0121951 | 38.095 | 147 | 77 | 5 | 184 | 323 | 419 | 558 | 2.12e-14 | 74.7 |
| Msa1001200 | MtrunA17_Chr8g0377991 | 36.567 | 134 | 69 | 4 | 190 | 323 | 448 | 565 | 5.86e-14 | 73.2 |
| Msa1001200 | MtrunA17_Chr3g0120731 | 34.014 | 147 | 87 | 5 | 206 | 345 | 452 | 595 | 2.65e-13 | 71.2 |
| Msa1001200 | MtrunA17_Chr4g0028451 | 52.941 | 51 | 24 | 0 | 300 | 350 | 10 | 60 | 2.13e-12 | 63.2 |
| Msa1001200 | MtrunA17_Chr5g0396711 | 25.000 | 292 | 164 | 8 | 100 | 343 | 238 | 522 | 1.78e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001200 | AT4G19010.1 | 55.181 | 386 | 134 | 3 | 2 | 350 | 87 | 470 | 1.31e-146 | 426 |
| Msa1001200 | AT1G20510.2 | 39.691 | 388 | 191 | 5 | 1 | 350 | 70 | 452 | 2.76e-92 | 284 |
| Msa1001200 | AT1G20510.3 | 39.535 | 387 | 191 | 5 | 1 | 349 | 70 | 451 | 1.06e-91 | 283 |
| Msa1001200 | AT1G20510.1 | 39.691 | 388 | 191 | 5 | 1 | 350 | 70 | 452 | 1.63e-91 | 285 |
| Msa1001200 | AT1G20500.1 | 36.911 | 382 | 197 | 4 | 6 | 349 | 82 | 457 | 9.09e-84 | 265 |
| Msa1001200 | AT1G20480.1 | 35.949 | 395 | 200 | 5 | 1 | 350 | 87 | 473 | 8.10e-82 | 260 |
| Msa1001200 | AT5G38120.4 | 36.269 | 386 | 195 | 6 | 5 | 349 | 82 | 457 | 8.10e-79 | 249 |
| Msa1001200 | AT5G38120.2 | 36.269 | 386 | 195 | 6 | 5 | 349 | 82 | 457 | 8.10e-79 | 249 |
| Msa1001200 | AT5G38120.3 | 36.269 | 386 | 195 | 6 | 5 | 349 | 82 | 457 | 1.69e-78 | 250 |
| Msa1001200 | AT5G38120.1 | 36.269 | 386 | 195 | 6 | 5 | 349 | 82 | 457 | 3.22e-78 | 250 |
| Msa1001200 | AT5G63380.1 | 37.705 | 366 | 193 | 7 | 14 | 349 | 105 | 465 | 2.03e-76 | 246 |
| Msa1001200 | AT4G05160.1 | 35.897 | 390 | 206 | 5 | 1 | 350 | 67 | 452 | 4.46e-73 | 236 |
| Msa1001200 | AT1G20490.2 | 35.311 | 354 | 183 | 5 | 6 | 319 | 82 | 429 | 2.25e-67 | 219 |
| Msa1001200 | AT1G20490.1 | 35.311 | 354 | 183 | 5 | 6 | 319 | 82 | 429 | 2.25e-67 | 219 |
| Msa1001200 | AT3G21240.2 | 37.018 | 389 | 204 | 7 | 1 | 350 | 76 | 462 | 1.29e-65 | 216 |
| Msa1001200 | AT3G21240.3 | 37.018 | 389 | 204 | 7 | 1 | 350 | 76 | 462 | 1.29e-65 | 216 |
| Msa1001200 | AT3G21240.1 | 37.018 | 389 | 204 | 7 | 1 | 350 | 76 | 462 | 2.86e-65 | 216 |
| Msa1001200 | AT1G65060.2 | 36.456 | 395 | 212 | 7 | 1 | 358 | 88 | 480 | 1.51e-61 | 205 |
| Msa1001200 | AT1G65060.1 | 36.788 | 386 | 205 | 7 | 1 | 349 | 88 | 471 | 1.70e-59 | 201 |
| Msa1001200 | AT1G51680.2 | 36.548 | 394 | 204 | 7 | 1 | 350 | 78 | 469 | 5.03e-57 | 193 |
| Msa1001200 | AT1G51680.3 | 36.548 | 394 | 204 | 7 | 1 | 350 | 78 | 469 | 9.14e-57 | 194 |
| Msa1001200 | AT1G51680.1 | 36.548 | 394 | 204 | 7 | 1 | 350 | 78 | 469 | 1.21e-56 | 194 |
| Msa1001200 | AT3G21230.2 | 34.097 | 393 | 214 | 6 | 1 | 350 | 86 | 476 | 1.07e-54 | 187 |
| Msa1001200 | AT3G21230.1 | 34.097 | 393 | 214 | 6 | 1 | 350 | 86 | 476 | 2.99e-54 | 187 |
| Msa1001200 | AT3G21230.3 | 34.097 | 393 | 214 | 6 | 1 | 350 | 86 | 476 | 2.99e-54 | 187 |
| Msa1001200 | AT1G62940.1 | 33.673 | 392 | 209 | 10 | 1 | 350 | 66 | 448 | 2.42e-51 | 179 |
| Msa1001200 | AT3G21230.4 | 30.029 | 343 | 195 | 6 | 1 | 300 | 86 | 426 | 1.13e-29 | 119 |
| Msa1001200 | AT3G48990.1 | 27.105 | 380 | 230 | 10 | 9 | 350 | 52 | 422 | 4.58e-26 | 109 |
| Msa1001200 | AT1G21530.2 | 29.924 | 264 | 162 | 7 | 100 | 351 | 200 | 452 | 9.16e-23 | 100 |
| Msa1001200 | AT5G16370.1 | 25.298 | 419 | 226 | 14 | 1 | 351 | 53 | 452 | 5.57e-22 | 97.8 |
| Msa1001200 | AT1G21530.1 | 29.455 | 275 | 147 | 9 | 100 | 351 | 200 | 450 | 1.58e-21 | 96.3 |
| Msa1001200 | AT1G66120.1 | 28.159 | 277 | 172 | 10 | 100 | 360 | 202 | 467 | 3.35e-17 | 83.2 |
| Msa1001200 | AT1G75960.1 | 29.851 | 268 | 157 | 11 | 100 | 351 | 200 | 452 | 2.49e-16 | 80.5 |
| Msa1001200 | AT5G27600.1 | 28.025 | 314 | 153 | 12 | 87 | 343 | 257 | 554 | 2.67e-16 | 80.9 |
| Msa1001200 | AT1G77590.2 | 36.301 | 146 | 83 | 5 | 207 | 345 | 271 | 413 | 3.32e-15 | 77.4 |
| Msa1001200 | AT1G77590.1 | 35.443 | 158 | 89 | 6 | 195 | 345 | 408 | 559 | 4.36e-15 | 77.0 |
| Msa1001200 | AT3G05970.1 | 26.415 | 318 | 171 | 9 | 78 | 343 | 248 | 554 | 1.06e-14 | 75.9 |
| Msa1001200 | AT3G23790.1 | 37.705 | 122 | 62 | 3 | 232 | 342 | 474 | 592 | 1.15e-13 | 72.8 |
| Msa1001200 | AT3G16170.1 | 27.372 | 274 | 165 | 11 | 100 | 353 | 250 | 509 | 2.44e-13 | 71.6 |
| Msa1001200 | AT1G30520.3 | 25.830 | 271 | 168 | 9 | 100 | 349 | 188 | 446 | 6.89e-13 | 70.1 |
| Msa1001200 | AT1G30520.4 | 25.830 | 271 | 168 | 9 | 100 | 349 | 188 | 446 | 6.89e-13 | 70.1 |
| Msa1001200 | AT1G30520.2 | 25.830 | 271 | 168 | 9 | 100 | 349 | 188 | 446 | 7.29e-13 | 70.1 |
| Msa1001200 | AT1G30520.1 | 25.830 | 271 | 168 | 9 | 100 | 349 | 188 | 446 | 7.29e-13 | 70.1 |
Find 71 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTCTGCTTTACACAAAA+TGG | 0.138296 | 6_4:+84931607 | Msa1001200:CDS |
| ACATGGTAATAAATTGAATT+TGG | 0.167053 | 6_4:-84931665 | None:intergenic |
| CTATTGGCTGTTCTGTATTT+AGG | 0.170770 | 6_4:+84931692 | Msa1001200:CDS |
| TTGACATTGATGAGGTTATT+AGG | 0.176901 | 6_4:+84932205 | Msa1001200:CDS |
| TATCAAATACAAGGGATTTC+AGG | 0.243292 | 6_4:+84933932 | Msa1001200:CDS |
| TCATAGAAATCTTATTTCTA+TGG | 0.256021 | 6_4:+84932026 | Msa1001200:CDS |
| ATTCACAACTATTCGTCAAT+AGG | 0.296417 | 6_4:+84933077 | Msa1001200:CDS |
| TGACATTGATGAGGTTATTA+GGG | 0.322063 | 6_4:+84932206 | Msa1001200:CDS |
| CAGGCAGCTGCGGTGAGCTT+TGG | 0.328932 | 6_4:+84933162 | Msa1001200:CDS |
| TTATTACCATGTTATACTAT+TGG | 0.329364 | 6_4:+84931676 | Msa1001200:CDS |
| CAAAGCTCACCGCAGCTGCC+TGG | 0.332403 | 6_4:-84933161 | None:intergenic |
| ATGAAGGCAAAGGGTGTTAC+TGG | 0.333041 | 6_4:+84932291 | Msa1001200:CDS |
| TTGCCAATGTTTCATGTGTA+TGG | 0.342668 | 6_4:+84932120 | Msa1001200:CDS |
| AAAGCTCACCGCAGCTGCCT+GGG | 0.370228 | 6_4:-84933160 | None:intergenic |
| ACCTGTATAAAATCAACGTT+AGG | 0.376743 | 6_4:-84932399 | None:intergenic |
| TGTTGGAGAAATTCGTAAAC+AGG | 0.389491 | 6_4:+84931748 | Msa1001200:CDS |
| TGCTGCGGGATTATTGTCGT+TGG | 0.401502 | 6_4:+84932155 | Msa1001200:CDS |
| TTCACAACTATTCGTCAATA+GGG | 0.405454 | 6_4:+84933078 | Msa1001200:CDS |
| TGTTGTTCCACCGATGTTGT+CGG | 0.411176 | 6_4:+84932260 | Msa1001200:CDS |
| TCAGGATGGATATTTACATT+TGG | 0.418131 | 6_4:+84933890 | Msa1001200:CDS |
| GTCAAGAAACTAGAGCTATT+AGG | 0.418468 | 6_4:+84931815 | Msa1001200:CDS |
| CTATTCGTCAATAGGGTTGT+TGG | 0.424322 | 6_4:+84933085 | Msa1001200:CDS |
| GGTTTATCGCTCTTTGCTGC+GGG | 0.430597 | 6_4:+84932141 | Msa1001200:CDS |
| CAGAAAATGAGAAGGATTTG+AGG | 0.445513 | 6_4:+84931864 | Msa1001200:CDS |
| GCTGCGGGATTATTGTCGTT+GGG | 0.447735 | 6_4:+84932156 | Msa1001200:CDS |
| TGCGGTGAGCTTTGGTTGAG+AGG | 0.454034 | 6_4:+84933170 | Msa1001200:CDS |
| GCTTCTGCTTTACACAAAAT+GGG | 0.455667 | 6_4:+84931608 | Msa1001200:CDS |
| ATTTCTCCAACACTACTAAG+AGG | 0.475049 | 6_4:-84931737 | None:intergenic |
| TTGAATCCTCTTAGTAGTGT+TGG | 0.476337 | 6_4:+84931731 | Msa1001200:CDS |
| AAGCTCACCGCAGCTGCCTG+GGG | 0.478646 | 6_4:-84933159 | None:intergenic |
| GGTGCAGCGCCTTTGAGCAT+AGG | 0.486009 | 6_4:+84932348 | Msa1001200:CDS |
| CACAAAATGGGTGTTTCACA+AGG | 0.502968 | 6_4:+84931620 | Msa1001200:CDS |
| TGGTTTATCGCTCTTTGCTG+CGG | 0.507976 | 6_4:+84932140 | Msa1001200:CDS |
| TAAGTTGCAGAGTTTGAGAC+AGG | 0.511530 | 6_4:+84932317 | Msa1001200:CDS |
| CGGAGGCAAAAGTGGTAGAC+TGG | 0.515561 | 6_4:+84933117 | Msa1001200:CDS |
| GCGGTGAGCTTTGGTTGAGA+GGG | 0.517348 | 6_4:+84933171 | Msa1001200:CDS |
| AAACCATACACATGAAACAT+TGG | 0.533547 | 6_4:-84932123 | None:intergenic |
| TCCAAACACGGAGGCAAAAG+TGG | 0.534472 | 6_4:+84933109 | Msa1001200:CDS |
| ATATCAATAATTGATAAAGA+TGG | 0.536510 | 6_4:+84933834 | Msa1001200:CDS |
| ACACTACTAAGAGGATTCAA+TGG | 0.537393 | 6_4:-84931728 | None:intergenic |
| AAAGTGGTAGACTGGAACAA+TGG | 0.541163 | 6_4:+84933125 | Msa1001200:CDS |
| CTCAGGATACTTGAATAATG+AGG | 0.541417 | 6_4:+84933803 | Msa1001200:intron |
| AATCAACGTTAGGGAAAGCA+TGG | 0.550452 | 6_4:-84932389 | None:intergenic |
| GAAAGACATTATCAAATACA+AGG | 0.550958 | 6_4:+84933923 | Msa1001200:CDS |
| TTTGTGTAAAGCAGAAGCCA+TGG | 0.560434 | 6_4:-84931603 | None:intergenic |
| CCTGTATAAAATCAACGTTA+GGG | 0.562718 | 6_4:-84932398 | None:intergenic |
| GGCATTGACAATGAAGGCAA+AGG | 0.569984 | 6_4:+84932281 | Msa1001200:CDS |
| GCATTGACAATGAAGGCAAA+GGG | 0.570042 | 6_4:+84932282 | Msa1001200:CDS |
| CAATAATTGATAAAGATGGT+TGG | 0.571321 | 6_4:+84933838 | Msa1001200:CDS |
| GAGGAAATTTGACATTGATG+AGG | 0.576756 | 6_4:+84932197 | Msa1001200:CDS |
| AACAGCTAGAAACACACACT+TGG | 0.579086 | 6_4:-84932097 | None:intergenic |
| ATTGTCAATGCCGACAACAT+CGG | 0.579863 | 6_4:-84932270 | None:intergenic |
| CTAATAACTCCTATGCTCAA+AGG | 0.581487 | 6_4:-84932357 | None:intergenic |
| AGTTTGAGACAGGTCTCTTG+CGG | 0.592614 | 6_4:+84932327 | Msa1001200:CDS |
| GTTGTCGGCATTGACAATGA+AGG | 0.595731 | 6_4:+84932275 | Msa1001200:CDS |
| AGCTCACCGCAGCTGCCTGG+GGG | 0.606825 | 6_4:-84933158 | None:intergenic |
| CGTAAACAGGTTCAAGAGTG+TGG | 0.611754 | 6_4:+84931761 | Msa1001200:CDS |
| AGGGTTGTTGGCTCCAAACA+CGG | 0.614077 | 6_4:+84933097 | Msa1001200:CDS |
| GGGACTACAGGTGTGAGCAA+AGG | 0.615067 | 6_4:+84931991 | Msa1001200:intron |
| AAAGACATTATCAAATACAA+GGG | 0.615550 | 6_4:+84933924 | Msa1001200:CDS |
| GTCAATGCCGACAACATCGG+TGG | 0.615987 | 6_4:-84932267 | None:intergenic |
| AGAGGGCCTTCTATTATGAG+AGG | 0.618979 | 6_4:+84933188 | Msa1001200:CDS |
| TCGACTGCAGTGGGAACACG+TGG | 0.624008 | 6_4:+84933038 | Msa1001200:CDS |
| GCTCTACAGTCATTGTAATG+AGG | 0.624765 | 6_4:+84932178 | Msa1001200:CDS |
| ATGACTGAGTCGACTGCAGT+GGG | 0.649133 | 6_4:+84933029 | Msa1001200:CDS |
| TGCTGTGCCAGAAAATGAGA+AGG | 0.670004 | 6_4:+84931856 | Msa1001200:CDS |
| AAAGATGGTTGGCTACACAC+AGG | 0.679404 | 6_4:+84933849 | Msa1001200:CDS |
| AAGAAACTAGAGCTATTAGG+TGG | 0.680245 | 6_4:+84931818 | Msa1001200:CDS |
| GAACAGCCAATAGTATAACA+TGG | 0.692741 | 6_4:-84931682 | None:intergenic |
| AATGACTGAGTCGACTGCAG+TGG | 0.712703 | 6_4:+84933028 | Msa1001200:CDS |
| GTTGTTGGCTCCAAACACGG+AGG | 0.795141 | 6_4:+84933100 | Msa1001200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTCTTTGTTATTGT+TGG | + | chr6_4:84932504-84932523 | Msa1001200:intron | 15.0% |
| !! | AGATATTAAAAAGTAAAACA+CGG | + | chr6_4:84933235-84933254 | Msa1001200:intron | 15.0% |
| !! | ATATCAATAATTGATAAAGA+TGG | + | chr6_4:84933834-84933853 | Msa1001200:CDS | 15.0% |
| !!! | TTATTTTTCTTTGTTATTGT+TGG | + | chr6_4:84932504-84932523 | Msa1001200:intron | 15.0% |
| !! | AGATATTAAAAAGTAAAACA+CGG | + | chr6_4:84933235-84933254 | Msa1001200:intron | 15.0% |
| !! | ATATCAATAATTGATAAAGA+TGG | + | chr6_4:84933834-84933853 | Msa1001200:CDS | 15.0% |
| !! | ACATGGTAATAAATTGAATT+TGG | - | chr6_4:84931668-84931687 | None:intergenic | 20.0% |
| !! | TTATTACCATGTTATACTAT+TGG | + | chr6_4:84931676-84931695 | Msa1001200:CDS | 20.0% |
| !!! | AGTTTTTTTAACCTTCTTTA+TGG | + | chr6_4:84931901-84931920 | Msa1001200:intron | 20.0% |
| !! | AATCAAATTTACCATAAAGA+AGG | - | chr6_4:84931915-84931934 | None:intergenic | 20.0% |
| !!! | TCATAGAAATCTTATTTCTA+TGG | + | chr6_4:84932026-84932045 | Msa1001200:CDS | 20.0% |
| !! | ATTAAGACTATTCTATTCAA+AGG | - | chr6_4:84932431-84932450 | None:intergenic | 20.0% |
| !! | TTTAATAGCAACTGTTATAT+AGG | + | chr6_4:84932585-84932604 | Msa1001200:intron | 20.0% |
| !! | TTAATAGCAACTGTTATATA+GGG | + | chr6_4:84932586-84932605 | Msa1001200:intron | 20.0% |
| !!! | TCATTAACATTTTACTGATA+AGG | - | chr6_4:84933564-84933583 | None:intergenic | 20.0% |
| !! | AAATTGAAGTAAATTTCTCT+TGG | + | chr6_4:84933651-84933670 | Msa1001200:intron | 20.0% |
| !! | GTTTGATTAACAACTTTAAT+TGG | - | chr6_4:84933769-84933788 | None:intergenic | 20.0% |
| !!! | AGATATTGTTTATTTTGATC+AGG | + | chr6_4:84933872-84933891 | Msa1001200:CDS | 20.0% |
| !! | AAAGACATTATCAAATACAA+GGG | + | chr6_4:84933924-84933943 | Msa1001200:CDS | 20.0% |
| !! | ACATGGTAATAAATTGAATT+TGG | - | chr6_4:84931668-84931687 | None:intergenic | 20.0% |
| !! | TTATTACCATGTTATACTAT+TGG | + | chr6_4:84931676-84931695 | Msa1001200:CDS | 20.0% |
| !!! | AGTTTTTTTAACCTTCTTTA+TGG | + | chr6_4:84931901-84931920 | Msa1001200:intron | 20.0% |
| !! | AATCAAATTTACCATAAAGA+AGG | - | chr6_4:84931915-84931934 | None:intergenic | 20.0% |
| !!! | TCATAGAAATCTTATTTCTA+TGG | + | chr6_4:84932026-84932045 | Msa1001200:CDS | 20.0% |
| !! | ATTAAGACTATTCTATTCAA+AGG | - | chr6_4:84932431-84932450 | None:intergenic | 20.0% |
| !! | TTTAATAGCAACTGTTATAT+AGG | + | chr6_4:84932585-84932604 | Msa1001200:intron | 20.0% |
| !! | TTAATAGCAACTGTTATATA+GGG | + | chr6_4:84932586-84932605 | Msa1001200:intron | 20.0% |
| !!! | TCATTAACATTTTACTGATA+AGG | - | chr6_4:84933564-84933583 | None:intergenic | 20.0% |
| !! | AAATTGAAGTAAATTTCTCT+TGG | + | chr6_4:84933651-84933670 | Msa1001200:intron | 20.0% |
| !! | GTTTGATTAACAACTTTAAT+TGG | - | chr6_4:84933769-84933788 | None:intergenic | 20.0% |
| !!! | AGATATTGTTTATTTTGATC+AGG | + | chr6_4:84933872-84933891 | Msa1001200:CDS | 20.0% |
| !! | AAAGACATTATCAAATACAA+GGG | + | chr6_4:84933924-84933943 | Msa1001200:CDS | 20.0% |
| !!! | TAAATTTGATTTGCCTCAAA+GGG | + | chr6_4:84931924-84931943 | Msa1001200:intron | 25.0% |
| !!! | TTATGATCTAGAATTTGTTG+TGG | - | chr6_4:84932923-84932942 | None:intergenic | 25.0% |
| ! | CTTACAGCTATTAATAATCT+AGG | - | chr6_4:84932985-84933004 | None:intergenic | 25.0% |
| !!! | TGTAAGATTGTTTCTTTTCA+GGG | + | chr6_4:84932999-84933018 | Msa1001200:intron | 25.0% |
| !! | TTTTTACCTCTCATAATAGA+AGG | - | chr6_4:84933197-84933216 | None:intergenic | 25.0% |
| ! | AAAACACGGTAGTAATATAA+AGG | + | chr6_4:84933249-84933268 | Msa1001200:intron | 25.0% |
| ! | TATAGAGCAAATATCGTAAA+GGG | - | chr6_4:84933391-84933410 | None:intergenic | 25.0% |
| ! | ATATAGAGCAAATATCGTAA+AGG | - | chr6_4:84933392-84933411 | None:intergenic | 25.0% |
| !!! | ATTTGTTATCGCTTAACTAA+AGG | + | chr6_4:84933410-84933429 | Msa1001200:intron | 25.0% |
| ! | CAATAATTGATAAAGATGGT+TGG | + | chr6_4:84933838-84933857 | Msa1001200:CDS | 25.0% |
| !!! | ATTGTTTATTTTGATCAGGA+TGG | + | chr6_4:84933876-84933895 | Msa1001200:CDS | 25.0% |
| ! | GAAAGACATTATCAAATACA+AGG | + | chr6_4:84933923-84933942 | Msa1001200:CDS | 25.0% |
| !!! | TAAATTTGATTTGCCTCAAA+GGG | + | chr6_4:84931924-84931943 | Msa1001200:intron | 25.0% |
| !!! | TTATGATCTAGAATTTGTTG+TGG | - | chr6_4:84932923-84932942 | None:intergenic | 25.0% |
| ! | CTTACAGCTATTAATAATCT+AGG | - | chr6_4:84932985-84933004 | None:intergenic | 25.0% |
| !!! | TGTAAGATTGTTTCTTTTCA+GGG | + | chr6_4:84932999-84933018 | Msa1001200:intron | 25.0% |
| !! | TTTTTACCTCTCATAATAGA+AGG | - | chr6_4:84933197-84933216 | None:intergenic | 25.0% |
| ! | AAAACACGGTAGTAATATAA+AGG | + | chr6_4:84933249-84933268 | Msa1001200:intron | 25.0% |
| ! | TATAGAGCAAATATCGTAAA+GGG | - | chr6_4:84933391-84933410 | None:intergenic | 25.0% |
| ! | ATATAGAGCAAATATCGTAA+AGG | - | chr6_4:84933392-84933411 | None:intergenic | 25.0% |
| !!! | ATTTGTTATCGCTTAACTAA+AGG | + | chr6_4:84933410-84933429 | Msa1001200:intron | 25.0% |
| ! | CAATAATTGATAAAGATGGT+TGG | + | chr6_4:84933838-84933857 | Msa1001200:CDS | 25.0% |
| !!! | ATTGTTTATTTTGATCAGGA+TGG | + | chr6_4:84933876-84933895 | Msa1001200:CDS | 25.0% |
| ! | GAAAGACATTATCAAATACA+AGG | + | chr6_4:84933923-84933942 | Msa1001200:CDS | 25.0% |
| !! | TCTAGTTTCTTGACATTTTC+AGG | - | chr6_4:84931809-84931828 | None:intergenic | 30.0% |
| !! | GTAAATTTGATTTGCCTCAA+AGG | + | chr6_4:84931923-84931942 | Msa1001200:intron | 30.0% |
| TGTTTAATAACTACCCTTTG+AGG | - | chr6_4:84931940-84931959 | None:intergenic | 30.0% | |
| TCAAAGGGTAGTTATTAAAC+AGG | + | chr6_4:84931939-84931958 | Msa1001200:intron | 30.0% | |
| CTGGTATATTGTATTCATCT+GGG | + | chr6_4:84931971-84931990 | Msa1001200:intron | 30.0% | |
| AAACCATACACATGAAACAT+TGG | - | chr6_4:84932126-84932145 | None:intergenic | 30.0% | |
| TTGACATTGATGAGGTTATT+AGG | + | chr6_4:84932205-84932224 | Msa1001200:CDS | 30.0% | |
| TGACATTGATGAGGTTATTA+GGG | + | chr6_4:84932206-84932225 | Msa1001200:CDS | 30.0% | |
| CCTGTATAAAATCAACGTTA+GGG | - | chr6_4:84932401-84932420 | None:intergenic | 30.0% | |
| ACCTGTATAAAATCAACGTT+AGG | - | chr6_4:84932402-84932421 | None:intergenic | 30.0% | |
| TCAAGCAATCATATAAACGA+TGG | - | chr6_4:84932474-84932493 | None:intergenic | 30.0% | |
| AATAAGTTGTTTAGCCAAAC+AGG | - | chr6_4:84932612-84932631 | None:intergenic | 30.0% | |
| GTTTGGCTAAACAACTTATT+TGG | + | chr6_4:84932612-84932631 | Msa1001200:intron | 30.0% | |
| AAATAAGCTGAACAGAACTA+AGG | + | chr6_4:84932779-84932798 | Msa1001200:intron | 30.0% | |
| !! | CTGTAAGATTGTTTCTTTTC+AGG | + | chr6_4:84932998-84933017 | Msa1001200:intron | 30.0% |
| ATTCACAACTATTCGTCAAT+AGG | + | chr6_4:84933077-84933096 | Msa1001200:CDS | 30.0% | |
| TTCACAACTATTCGTCAATA+GGG | + | chr6_4:84933078-84933097 | Msa1001200:CDS | 30.0% | |
| ATAGAGCAAATATCGTAAAG+GGG | - | chr6_4:84933390-84933409 | None:intergenic | 30.0% | |
| AACCAACATGATATTTCTCA+AGG | - | chr6_4:84933443-84933462 | None:intergenic | 30.0% | |
| AACTCTTTCCTTTAATTCTC+AGG | + | chr6_4:84933786-84933805 | Msa1001200:intron | 30.0% | |
| TCAAGTATCCTGAGAATTAA+AGG | - | chr6_4:84933797-84933816 | None:intergenic | 30.0% | |
| TCAGGATGGATATTTACATT+TGG | + | chr6_4:84933890-84933909 | Msa1001200:CDS | 30.0% | |
| TATCAAATACAAGGGATTTC+AGG | + | chr6_4:84933932-84933951 | Msa1001200:CDS | 30.0% | |
| !! | TCTAGTTTCTTGACATTTTC+AGG | - | chr6_4:84931809-84931828 | None:intergenic | 30.0% |
| !! | GTAAATTTGATTTGCCTCAA+AGG | + | chr6_4:84931923-84931942 | Msa1001200:intron | 30.0% |
| TGTTTAATAACTACCCTTTG+AGG | - | chr6_4:84931940-84931959 | None:intergenic | 30.0% | |
| TCAAAGGGTAGTTATTAAAC+AGG | + | chr6_4:84931939-84931958 | Msa1001200:intron | 30.0% | |
| CTGGTATATTGTATTCATCT+GGG | + | chr6_4:84931971-84931990 | Msa1001200:intron | 30.0% | |
| AAACCATACACATGAAACAT+TGG | - | chr6_4:84932126-84932145 | None:intergenic | 30.0% | |
| TTGACATTGATGAGGTTATT+AGG | + | chr6_4:84932205-84932224 | Msa1001200:CDS | 30.0% | |
| TGACATTGATGAGGTTATTA+GGG | + | chr6_4:84932206-84932225 | Msa1001200:CDS | 30.0% | |
| CCTGTATAAAATCAACGTTA+GGG | - | chr6_4:84932401-84932420 | None:intergenic | 30.0% | |
| ACCTGTATAAAATCAACGTT+AGG | - | chr6_4:84932402-84932421 | None:intergenic | 30.0% | |
| TCAAGCAATCATATAAACGA+TGG | - | chr6_4:84932474-84932493 | None:intergenic | 30.0% | |
| AATAAGTTGTTTAGCCAAAC+AGG | - | chr6_4:84932612-84932631 | None:intergenic | 30.0% | |
| GTTTGGCTAAACAACTTATT+TGG | + | chr6_4:84932612-84932631 | Msa1001200:intron | 30.0% | |
| AAATAAGCTGAACAGAACTA+AGG | + | chr6_4:84932779-84932798 | Msa1001200:intron | 30.0% | |
| !! | CTGTAAGATTGTTTCTTTTC+AGG | + | chr6_4:84932998-84933017 | Msa1001200:intron | 30.0% |
| ATTCACAACTATTCGTCAAT+AGG | + | chr6_4:84933077-84933096 | Msa1001200:CDS | 30.0% | |
| TTCACAACTATTCGTCAATA+GGG | + | chr6_4:84933078-84933097 | Msa1001200:CDS | 30.0% | |
| ATAGAGCAAATATCGTAAAG+GGG | - | chr6_4:84933390-84933409 | None:intergenic | 30.0% | |
| AACCAACATGATATTTCTCA+AGG | - | chr6_4:84933443-84933462 | None:intergenic | 30.0% | |
| AACTCTTTCCTTTAATTCTC+AGG | + | chr6_4:84933786-84933805 | Msa1001200:intron | 30.0% | |
| TCAAGTATCCTGAGAATTAA+AGG | - | chr6_4:84933797-84933816 | None:intergenic | 30.0% | |
| TCAGGATGGATATTTACATT+TGG | + | chr6_4:84933890-84933909 | Msa1001200:CDS | 30.0% | |
| TATCAAATACAAGGGATTTC+AGG | + | chr6_4:84933932-84933951 | Msa1001200:CDS | 30.0% | |
| GCTTCTGCTTTACACAAAAT+GGG | + | chr6_4:84931608-84931627 | Msa1001200:CDS | 35.0% | |
| GAACAGCCAATAGTATAACA+TGG | - | chr6_4:84931685-84931704 | None:intergenic | 35.0% | |
| ! | CTATTGGCTGTTCTGTATTT+AGG | + | chr6_4:84931692-84931711 | Msa1001200:CDS | 35.0% |
| ACACTACTAAGAGGATTCAA+TGG | - | chr6_4:84931731-84931750 | None:intergenic | 35.0% | |
| TTGAATCCTCTTAGTAGTGT+TGG | + | chr6_4:84931731-84931750 | Msa1001200:CDS | 35.0% | |
| ATTTCTCCAACACTACTAAG+AGG | - | chr6_4:84931740-84931759 | None:intergenic | 35.0% | |
| TGTTGGAGAAATTCGTAAAC+AGG | + | chr6_4:84931748-84931767 | Msa1001200:CDS | 35.0% | |
| GTCAAGAAACTAGAGCTATT+AGG | + | chr6_4:84931815-84931834 | Msa1001200:CDS | 35.0% | |
| AAGAAACTAGAGCTATTAGG+TGG | + | chr6_4:84931818-84931837 | Msa1001200:CDS | 35.0% | |
| ! | CTCAAATCCTTCTCATTTTC+TGG | - | chr6_4:84931866-84931885 | None:intergenic | 35.0% |
| CAGAAAATGAGAAGGATTTG+AGG | + | chr6_4:84931864-84931883 | Msa1001200:CDS | 35.0% | |
| ATTAAACAGGAAGATACTGC+TGG | + | chr6_4:84931952-84931971 | Msa1001200:intron | 35.0% | |
| GCTGGTATATTGTATTCATC+TGG | + | chr6_4:84931970-84931989 | Msa1001200:intron | 35.0% | |
| TTGCCAATGTTTCATGTGTA+TGG | + | chr6_4:84932120-84932139 | Msa1001200:CDS | 35.0% | |
| GAGGAAATTTGACATTGATG+AGG | + | chr6_4:84932197-84932216 | Msa1001200:CDS | 35.0% | |
| CTAATAACTCCTATGCTCAA+AGG | - | chr6_4:84932360-84932379 | None:intergenic | 35.0% | |
| !!! | CCCTAACGTTGATTTTATAC+AGG | + | chr6_4:84932398-84932417 | Msa1001200:CDS | 35.0% |
| !! | GTCGTTTTCATAAGCTATCT+TGG | + | chr6_4:84932745-84932764 | Msa1001200:intron | 35.0% |
| ! | TAAGTTTTGCGAGACTGTTT+GGG | - | chr6_4:84932835-84932854 | None:intergenic | 35.0% |
| ! | ATAAGTTTTGCGAGACTGTT+TGG | - | chr6_4:84932836-84932855 | None:intergenic | 35.0% |
| AATTGTTTGAGCTTGTCTAC+TGG | - | chr6_4:84932860-84932879 | None:intergenic | 35.0% | |
| !! | ATTGTTTCTTTTCAGGGTTG+TGG | + | chr6_4:84933005-84933024 | Msa1001200:intron | 35.0% |
| ATGCAAATGTAGGGTAAGAT+TGG | - | chr6_4:84933290-84933309 | None:intergenic | 35.0% | |
| ATCAAGCTCATGCAAATGTA+GGG | - | chr6_4:84933299-84933318 | None:intergenic | 35.0% | |
| AATCAAGCTCATGCAAATGT+AGG | - | chr6_4:84933300-84933319 | None:intergenic | 35.0% | |
| TTTGCATGAGCTTGATTCAA+TGG | + | chr6_4:84933303-84933322 | Msa1001200:intron | 35.0% | |
| ATGATATTTCTCAAGGACAC+AGG | - | chr6_4:84933436-84933455 | None:intergenic | 35.0% | |
| GTCCTTGAGAAATATCATGT+TGG | + | chr6_4:84933438-84933457 | Msa1001200:intron | 35.0% | |
| TATACACTCATCTGTTGTTG+TGG | + | chr6_4:84933494-84933513 | Msa1001200:intron | 35.0% | |
| ATAGCGAACAACAACAATCA+AGG | + | chr6_4:84933608-84933627 | Msa1001200:intron | 35.0% | |
| !!! | AATCAAGGCCTTTTTTCACT+AGG | + | chr6_4:84933623-84933642 | Msa1001200:intron | 35.0% |
| ! | TTTTCCCACCTAGTGAAAAA+AGG | - | chr6_4:84933634-84933653 | None:intergenic | 35.0% |
| ! | AGAAAAAAGAAGGTACAGGT+AGG | - | chr6_4:84933728-84933747 | None:intergenic | 35.0% |
| ! | GACAAGAAAAAAGAAGGTAC+AGG | - | chr6_4:84933732-84933751 | None:intergenic | 35.0% |
| CAGCAAGACAAGAAAAAAGA+AGG | - | chr6_4:84933738-84933757 | None:intergenic | 35.0% | |
| CTCAGGATACTTGAATAATG+AGG | + | chr6_4:84933803-84933822 | Msa1001200:intron | 35.0% | |
| !!! | GATTTCAGGTAGCTACTTTT+AGG | + | chr6_4:84933946-84933965 | Msa1001200:CDS | 35.0% |
| GCTTCTGCTTTACACAAAAT+GGG | + | chr6_4:84931608-84931627 | Msa1001200:CDS | 35.0% | |
| GAACAGCCAATAGTATAACA+TGG | - | chr6_4:84931685-84931704 | None:intergenic | 35.0% | |
| ! | CTATTGGCTGTTCTGTATTT+AGG | + | chr6_4:84931692-84931711 | Msa1001200:CDS | 35.0% |
| ACACTACTAAGAGGATTCAA+TGG | - | chr6_4:84931731-84931750 | None:intergenic | 35.0% | |
| TTGAATCCTCTTAGTAGTGT+TGG | + | chr6_4:84931731-84931750 | Msa1001200:CDS | 35.0% | |
| ATTTCTCCAACACTACTAAG+AGG | - | chr6_4:84931740-84931759 | None:intergenic | 35.0% | |
| TGTTGGAGAAATTCGTAAAC+AGG | + | chr6_4:84931748-84931767 | Msa1001200:CDS | 35.0% | |
| GTCAAGAAACTAGAGCTATT+AGG | + | chr6_4:84931815-84931834 | Msa1001200:CDS | 35.0% | |
| AAGAAACTAGAGCTATTAGG+TGG | + | chr6_4:84931818-84931837 | Msa1001200:CDS | 35.0% | |
| ! | CTCAAATCCTTCTCATTTTC+TGG | - | chr6_4:84931866-84931885 | None:intergenic | 35.0% |
| CAGAAAATGAGAAGGATTTG+AGG | + | chr6_4:84931864-84931883 | Msa1001200:CDS | 35.0% | |
| ATTAAACAGGAAGATACTGC+TGG | + | chr6_4:84931952-84931971 | Msa1001200:intron | 35.0% | |
| GCTGGTATATTGTATTCATC+TGG | + | chr6_4:84931970-84931989 | Msa1001200:intron | 35.0% | |
| TTGCCAATGTTTCATGTGTA+TGG | + | chr6_4:84932120-84932139 | Msa1001200:CDS | 35.0% | |
| GAGGAAATTTGACATTGATG+AGG | + | chr6_4:84932197-84932216 | Msa1001200:CDS | 35.0% | |
| CTAATAACTCCTATGCTCAA+AGG | - | chr6_4:84932360-84932379 | None:intergenic | 35.0% | |
| !!! | CCCTAACGTTGATTTTATAC+AGG | + | chr6_4:84932398-84932417 | Msa1001200:CDS | 35.0% |
| !! | GTCGTTTTCATAAGCTATCT+TGG | + | chr6_4:84932745-84932764 | Msa1001200:intron | 35.0% |
| ! | TAAGTTTTGCGAGACTGTTT+GGG | - | chr6_4:84932835-84932854 | None:intergenic | 35.0% |
| ! | ATAAGTTTTGCGAGACTGTT+TGG | - | chr6_4:84932836-84932855 | None:intergenic | 35.0% |
| AATTGTTTGAGCTTGTCTAC+TGG | - | chr6_4:84932860-84932879 | None:intergenic | 35.0% | |
| !! | ATTGTTTCTTTTCAGGGTTG+TGG | + | chr6_4:84933005-84933024 | Msa1001200:intron | 35.0% |
| ATGCAAATGTAGGGTAAGAT+TGG | - | chr6_4:84933290-84933309 | None:intergenic | 35.0% | |
| ATCAAGCTCATGCAAATGTA+GGG | - | chr6_4:84933299-84933318 | None:intergenic | 35.0% | |
| AATCAAGCTCATGCAAATGT+AGG | - | chr6_4:84933300-84933319 | None:intergenic | 35.0% | |
| TTTGCATGAGCTTGATTCAA+TGG | + | chr6_4:84933303-84933322 | Msa1001200:intron | 35.0% | |
| ATGATATTTCTCAAGGACAC+AGG | - | chr6_4:84933436-84933455 | None:intergenic | 35.0% | |
| GTCCTTGAGAAATATCATGT+TGG | + | chr6_4:84933438-84933457 | Msa1001200:intron | 35.0% | |
| TATACACTCATCTGTTGTTG+TGG | + | chr6_4:84933494-84933513 | Msa1001200:intron | 35.0% | |
| ATAGCGAACAACAACAATCA+AGG | + | chr6_4:84933608-84933627 | Msa1001200:intron | 35.0% | |
| !!! | AATCAAGGCCTTTTTTCACT+AGG | + | chr6_4:84933623-84933642 | Msa1001200:intron | 35.0% |
| ! | TTTTCCCACCTAGTGAAAAA+AGG | - | chr6_4:84933634-84933653 | None:intergenic | 35.0% |
| ! | AGAAAAAAGAAGGTACAGGT+AGG | - | chr6_4:84933728-84933747 | None:intergenic | 35.0% |
| ! | GACAAGAAAAAAGAAGGTAC+AGG | - | chr6_4:84933732-84933751 | None:intergenic | 35.0% |
| CAGCAAGACAAGAAAAAAGA+AGG | - | chr6_4:84933738-84933757 | None:intergenic | 35.0% | |
| CTCAGGATACTTGAATAATG+AGG | + | chr6_4:84933803-84933822 | Msa1001200:intron | 35.0% | |
| !!! | GATTTCAGGTAGCTACTTTT+AGG | + | chr6_4:84933946-84933965 | Msa1001200:CDS | 35.0% |
| GGCTTCTGCTTTACACAAAA+TGG | + | chr6_4:84931607-84931626 | Msa1001200:CDS | 40.0% | |
| CACAAAATGGGTGTTTCACA+AGG | + | chr6_4:84931620-84931639 | Msa1001200:CDS | 40.0% | |
| !! | TTTTCTGGCACAGCAACAAT+GGG | - | chr6_4:84931851-84931870 | None:intergenic | 40.0% |
| !! | ATTTTCTGGCACAGCAACAA+TGG | - | chr6_4:84931852-84931871 | None:intergenic | 40.0% |
| ! | TTGTATTCATCTGGGACTAC+AGG | + | chr6_4:84931979-84931998 | Msa1001200:intron | 40.0% |
| AACAGCTAGAAACACACACT+TGG | - | chr6_4:84932100-84932119 | None:intergenic | 40.0% | |
| GCTCTACAGTCATTGTAATG+AGG | + | chr6_4:84932178-84932197 | Msa1001200:CDS | 40.0% | |
| ATTGTCAATGCCGACAACAT+CGG | - | chr6_4:84932273-84932292 | None:intergenic | 40.0% | |
| ! | GCATTGACAATGAAGGCAAA+GGG | + | chr6_4:84932282-84932301 | Msa1001200:CDS | 40.0% |
| ! | TAAGTTGCAGAGTTTGAGAC+AGG | + | chr6_4:84932317-84932336 | Msa1001200:CDS | 40.0% |
| AATCAACGTTAGGGAAAGCA+TGG | - | chr6_4:84932392-84932411 | None:intergenic | 40.0% | |
| ACTGTTATATAGGGCCTGTT+TGG | + | chr6_4:84932595-84932614 | Msa1001200:intron | 40.0% | |
| CTATTCGTCAATAGGGTTGT+TGG | + | chr6_4:84933085-84933104 | Msa1001200:CDS | 40.0% | |
| AAAGTGGTAGACTGGAACAA+TGG | + | chr6_4:84933125-84933144 | Msa1001200:CDS | 40.0% | |
| AGCAAATATCGTAAAGGGGA+GGG | - | chr6_4:84933386-84933405 | None:intergenic | 40.0% | |
| !!! | AAGGCCTTTTTTCACTAGGT+GGG | + | chr6_4:84933627-84933646 | Msa1001200:intron | 40.0% |
| TACAGGTAGGCTAAGGAATA+AGG | - | chr6_4:84933715-84933734 | None:intergenic | 40.0% | |
| GGCTTCTGCTTTACACAAAA+TGG | + | chr6_4:84931607-84931626 | Msa1001200:CDS | 40.0% | |
| CACAAAATGGGTGTTTCACA+AGG | + | chr6_4:84931620-84931639 | Msa1001200:CDS | 40.0% | |
| !! | TTTTCTGGCACAGCAACAAT+GGG | - | chr6_4:84931851-84931870 | None:intergenic | 40.0% |
| !! | ATTTTCTGGCACAGCAACAA+TGG | - | chr6_4:84931852-84931871 | None:intergenic | 40.0% |
| ! | TTGTATTCATCTGGGACTAC+AGG | + | chr6_4:84931979-84931998 | Msa1001200:intron | 40.0% |
| AACAGCTAGAAACACACACT+TGG | - | chr6_4:84932100-84932119 | None:intergenic | 40.0% | |
| GCTCTACAGTCATTGTAATG+AGG | + | chr6_4:84932178-84932197 | Msa1001200:CDS | 40.0% | |
| ATTGTCAATGCCGACAACAT+CGG | - | chr6_4:84932273-84932292 | None:intergenic | 40.0% | |
| ! | GCATTGACAATGAAGGCAAA+GGG | + | chr6_4:84932282-84932301 | Msa1001200:CDS | 40.0% |
| ! | TAAGTTGCAGAGTTTGAGAC+AGG | + | chr6_4:84932317-84932336 | Msa1001200:CDS | 40.0% |
| AATCAACGTTAGGGAAAGCA+TGG | - | chr6_4:84932392-84932411 | None:intergenic | 40.0% | |
| ACTGTTATATAGGGCCTGTT+TGG | + | chr6_4:84932595-84932614 | Msa1001200:intron | 40.0% | |
| CTATTCGTCAATAGGGTTGT+TGG | + | chr6_4:84933085-84933104 | Msa1001200:CDS | 40.0% | |
| AAAGTGGTAGACTGGAACAA+TGG | + | chr6_4:84933125-84933144 | Msa1001200:CDS | 40.0% | |
| AGCAAATATCGTAAAGGGGA+GGG | - | chr6_4:84933386-84933405 | None:intergenic | 40.0% | |
| !!! | AAGGCCTTTTTTCACTAGGT+GGG | + | chr6_4:84933627-84933646 | Msa1001200:intron | 40.0% |
| TACAGGTAGGCTAAGGAATA+AGG | - | chr6_4:84933715-84933734 | None:intergenic | 40.0% | |
| CGTAAACAGGTTCAAGAGTG+TGG | + | chr6_4:84931761-84931780 | Msa1001200:CDS | 45.0% | |
| TGCTGTGCCAGAAAATGAGA+AGG | + | chr6_4:84931856-84931875 | Msa1001200:CDS | 45.0% | |
| TGGTTTATCGCTCTTTGCTG+CGG | + | chr6_4:84932140-84932159 | Msa1001200:CDS | 45.0% | |
| TGTTGTTCCACCGATGTTGT+CGG | + | chr6_4:84932260-84932279 | Msa1001200:CDS | 45.0% | |
| !! | GTTGTCGGCATTGACAATGA+AGG | + | chr6_4:84932275-84932294 | Msa1001200:CDS | 45.0% |
| !! | GGCATTGACAATGAAGGCAA+AGG | + | chr6_4:84932281-84932300 | Msa1001200:CDS | 45.0% |
| !! | ATGAAGGCAAAGGGTGTTAC+TGG | + | chr6_4:84932291-84932310 | Msa1001200:CDS | 45.0% |
| ! | AGTTTGAGACAGGTCTCTTG+CGG | + | chr6_4:84932327-84932346 | Msa1001200:CDS | 45.0% |
| !!! | AATGGTACTTTTTTGCCCCC+AGG | + | chr6_4:84933143-84933162 | Msa1001200:CDS | 45.0% |
| AGAGGGCCTTCTATTATGAG+AGG | + | chr6_4:84933188-84933207 | Msa1001200:CDS | 45.0% | |
| CATGAGCTTGATTCAATGGC+TGG | + | chr6_4:84933307-84933326 | Msa1001200:intron | 45.0% | |
| !! | AAAGGTTTGAGTTGCTGCAG+TGG | - | chr6_4:84933352-84933371 | None:intergenic | 45.0% |
| !! | GGGAGGGAGTTTTGACATAA+AGG | - | chr6_4:84933370-84933389 | None:intergenic | 45.0% |
| GAGCAAATATCGTAAAGGGG+AGG | - | chr6_4:84933387-84933406 | None:intergenic | 45.0% | |
| !!! | CAAGGCCTTTTTTCACTAGG+TGG | + | chr6_4:84933626-84933645 | Msa1001200:intron | 45.0% |
| ! | AAGAAGGTACAGGTAGGCTA+AGG | - | chr6_4:84933722-84933741 | None:intergenic | 45.0% |
| ! | AAAGATGGTTGGCTACACAC+AGG | + | chr6_4:84933849-84933868 | Msa1001200:CDS | 45.0% |
| CGTAAACAGGTTCAAGAGTG+TGG | + | chr6_4:84931761-84931780 | Msa1001200:CDS | 45.0% | |
| TGCTGTGCCAGAAAATGAGA+AGG | + | chr6_4:84931856-84931875 | Msa1001200:CDS | 45.0% | |
| TGGTTTATCGCTCTTTGCTG+CGG | + | chr6_4:84932140-84932159 | Msa1001200:CDS | 45.0% | |
| TGTTGTTCCACCGATGTTGT+CGG | + | chr6_4:84932260-84932279 | Msa1001200:CDS | 45.0% | |
| !! | GTTGTCGGCATTGACAATGA+AGG | + | chr6_4:84932275-84932294 | Msa1001200:CDS | 45.0% |
| !! | GGCATTGACAATGAAGGCAA+AGG | + | chr6_4:84932281-84932300 | Msa1001200:CDS | 45.0% |
| !! | ATGAAGGCAAAGGGTGTTAC+TGG | + | chr6_4:84932291-84932310 | Msa1001200:CDS | 45.0% |
| ! | AGTTTGAGACAGGTCTCTTG+CGG | + | chr6_4:84932327-84932346 | Msa1001200:CDS | 45.0% |
| !!! | AATGGTACTTTTTTGCCCCC+AGG | + | chr6_4:84933143-84933162 | Msa1001200:CDS | 45.0% |
| AGAGGGCCTTCTATTATGAG+AGG | + | chr6_4:84933188-84933207 | Msa1001200:CDS | 45.0% | |
| CATGAGCTTGATTCAATGGC+TGG | + | chr6_4:84933307-84933326 | Msa1001200:intron | 45.0% | |
| !! | AAAGGTTTGAGTTGCTGCAG+TGG | - | chr6_4:84933352-84933371 | None:intergenic | 45.0% |
| !! | GGGAGGGAGTTTTGACATAA+AGG | - | chr6_4:84933370-84933389 | None:intergenic | 45.0% |
| GAGCAAATATCGTAAAGGGG+AGG | - | chr6_4:84933387-84933406 | None:intergenic | 45.0% | |
| !!! | CAAGGCCTTTTTTCACTAGG+TGG | + | chr6_4:84933626-84933645 | Msa1001200:intron | 45.0% |
| ! | AAGAAGGTACAGGTAGGCTA+AGG | - | chr6_4:84933722-84933741 | None:intergenic | 45.0% |
| ! | AAAGATGGTTGGCTACACAC+AGG | + | chr6_4:84933849-84933868 | Msa1001200:CDS | 45.0% |
| GGTTTATCGCTCTTTGCTGC+GGG | + | chr6_4:84932141-84932160 | Msa1001200:CDS | 50.0% | |
| TGCTGCGGGATTATTGTCGT+TGG | + | chr6_4:84932155-84932174 | Msa1001200:CDS | 50.0% | |
| GCTGCGGGATTATTGTCGTT+GGG | + | chr6_4:84932156-84932175 | Msa1001200:CDS | 50.0% | |
| AATGACTGAGTCGACTGCAG+TGG | + | chr6_4:84933028-84933047 | Msa1001200:CDS | 50.0% | |
| ATGACTGAGTCGACTGCAGT+GGG | + | chr6_4:84933029-84933048 | Msa1001200:CDS | 50.0% | |
| !! | AGGGTTGTTGGCTCCAAACA+CGG | + | chr6_4:84933097-84933116 | Msa1001200:CDS | 50.0% |
| TCCAAACACGGAGGCAAAAG+TGG | + | chr6_4:84933109-84933128 | Msa1001200:CDS | 50.0% | |
| !! | ACCACTTTTGCCTCCGTGTT+TGG | - | chr6_4:84933113-84933132 | None:intergenic | 50.0% |
| CAGTGGTGTGACTAACGTTC+AGG | - | chr6_4:84933335-84933354 | None:intergenic | 50.0% | |
| GGTTTATCGCTCTTTGCTGC+GGG | + | chr6_4:84932141-84932160 | Msa1001200:CDS | 50.0% | |
| TGCTGCGGGATTATTGTCGT+TGG | + | chr6_4:84932155-84932174 | Msa1001200:CDS | 50.0% | |
| GCTGCGGGATTATTGTCGTT+GGG | + | chr6_4:84932156-84932175 | Msa1001200:CDS | 50.0% | |
| AATGACTGAGTCGACTGCAG+TGG | + | chr6_4:84933028-84933047 | Msa1001200:CDS | 50.0% | |
| ATGACTGAGTCGACTGCAGT+GGG | + | chr6_4:84933029-84933048 | Msa1001200:CDS | 50.0% | |
| !! | AGGGTTGTTGGCTCCAAACA+CGG | + | chr6_4:84933097-84933116 | Msa1001200:CDS | 50.0% |
| TCCAAACACGGAGGCAAAAG+TGG | + | chr6_4:84933109-84933128 | Msa1001200:CDS | 50.0% | |
| !! | ACCACTTTTGCCTCCGTGTT+TGG | - | chr6_4:84933113-84933132 | None:intergenic | 50.0% |
| CAGTGGTGTGACTAACGTTC+AGG | - | chr6_4:84933335-84933354 | None:intergenic | 50.0% | |
| GGGACTACAGGTGTGAGCAA+AGG | + | chr6_4:84931991-84932010 | Msa1001200:intron | 55.0% | |
| GTCAATGCCGACAACATCGG+TGG | - | chr6_4:84932270-84932289 | None:intergenic | 55.0% | |
| !! | GTTGTTGGCTCCAAACACGG+AGG | + | chr6_4:84933100-84933119 | Msa1001200:CDS | 55.0% |
| CGGAGGCAAAAGTGGTAGAC+TGG | + | chr6_4:84933117-84933136 | Msa1001200:CDS | 55.0% | |
| ! | TGCGGTGAGCTTTGGTTGAG+AGG | + | chr6_4:84933170-84933189 | Msa1001200:CDS | 55.0% |
| ! | GCGGTGAGCTTTGGTTGAGA+GGG | + | chr6_4:84933171-84933190 | Msa1001200:CDS | 55.0% |
| GGGACTACAGGTGTGAGCAA+AGG | + | chr6_4:84931991-84932010 | Msa1001200:intron | 55.0% | |
| GTCAATGCCGACAACATCGG+TGG | - | chr6_4:84932270-84932289 | None:intergenic | 55.0% | |
| !! | GTTGTTGGCTCCAAACACGG+AGG | + | chr6_4:84933100-84933119 | Msa1001200:CDS | 55.0% |
| CGGAGGCAAAAGTGGTAGAC+TGG | + | chr6_4:84933117-84933136 | Msa1001200:CDS | 55.0% | |
| ! | TGCGGTGAGCTTTGGTTGAG+AGG | + | chr6_4:84933170-84933189 | Msa1001200:CDS | 55.0% |
| ! | GCGGTGAGCTTTGGTTGAGA+GGG | + | chr6_4:84933171-84933190 | Msa1001200:CDS | 55.0% |
| GGTGCAGCGCCTTTGAGCAT+AGG | + | chr6_4:84932348-84932367 | Msa1001200:CDS | 60.0% | |
| TCGACTGCAGTGGGAACACG+TGG | + | chr6_4:84933038-84933057 | Msa1001200:CDS | 60.0% | |
| ! | TTTTTGCCCCCAGGCAGCTG+CGG | + | chr6_4:84933152-84933171 | Msa1001200:CDS | 60.0% |
| AAAGCTCACCGCAGCTGCCT+GGG | - | chr6_4:84933163-84933182 | None:intergenic | 60.0% | |
| GGTGCAGCGCCTTTGAGCAT+AGG | + | chr6_4:84932348-84932367 | Msa1001200:CDS | 60.0% | |
| TCGACTGCAGTGGGAACACG+TGG | + | chr6_4:84933038-84933057 | Msa1001200:CDS | 60.0% | |
| ! | TTTTTGCCCCCAGGCAGCTG+CGG | + | chr6_4:84933152-84933171 | Msa1001200:CDS | 60.0% |
| AAAGCTCACCGCAGCTGCCT+GGG | - | chr6_4:84933163-84933182 | None:intergenic | 60.0% | |
| AAGCTCACCGCAGCTGCCTG+GGG | - | chr6_4:84933162-84933181 | None:intergenic | 65.0% | |
| CAAAGCTCACCGCAGCTGCC+TGG | - | chr6_4:84933164-84933183 | None:intergenic | 65.0% | |
| CAGGCAGCTGCGGTGAGCTT+TGG | + | chr6_4:84933162-84933181 | Msa1001200:CDS | 65.0% | |
| AAGCTCACCGCAGCTGCCTG+GGG | - | chr6_4:84933162-84933181 | None:intergenic | 65.0% | |
| CAAAGCTCACCGCAGCTGCC+TGG | - | chr6_4:84933164-84933183 | None:intergenic | 65.0% | |
| CAGGCAGCTGCGGTGAGCTT+TGG | + | chr6_4:84933162-84933181 | Msa1001200:CDS | 65.0% | |
| AGCTCACCGCAGCTGCCTGG+GGG | - | chr6_4:84933161-84933180 | None:intergenic | 70.0% | |
| AGCTCACCGCAGCTGCCTGG+GGG | - | chr6_4:84933161-84933180 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 84931605 | 84933999 | 84931605 | ID=Msa1001200;Name=Msa1001200 |
| chr6_4 | mRNA | 84931605 | 84933999 | 84931605 | ID=Msa1001200-mRNA-1;Parent=Msa1001200;Name=Msa1001200-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.66|0.5|1|1|1|4|4|361 |
| chr6_4 | exon | 84931605 | 84931893 | 84931605 | ID=Msa1001200-mRNA-1:exon:16598;Parent=Msa1001200-mRNA-1 |
| chr6_4 | exon | 84932001 | 84932419 | 84932001 | ID=Msa1001200-mRNA-1:exon:16599;Parent=Msa1001200-mRNA-1 |
| chr6_4 | exon | 84933020 | 84933209 | 84933020 | ID=Msa1001200-mRNA-1:exon:16600;Parent=Msa1001200-mRNA-1 |
| chr6_4 | exon | 84933808 | 84933999 | 84933808 | ID=Msa1001200-mRNA-1:exon:16601;Parent=Msa1001200-mRNA-1 |
| chr6_4 | CDS | 84931605 | 84931893 | 84931605 | ID=Msa1001200-mRNA-1:cds;Parent=Msa1001200-mRNA-1 |
| chr6_4 | CDS | 84932001 | 84932419 | 84932001 | ID=Msa1001200-mRNA-1:cds;Parent=Msa1001200-mRNA-1 |
| chr6_4 | CDS | 84933020 | 84933209 | 84933020 | ID=Msa1001200-mRNA-1:cds;Parent=Msa1001200-mRNA-1 |
| chr6_4 | CDS | 84933808 | 84933995 | 84933808 | ID=Msa1001200-mRNA-1:cds;Parent=Msa1001200-mRNA-1 |
| chr6_4 | three_prime_UTR | 84933996 | 84933999 | 84933996 | ID=Msa1001200-mRNA-1:three_prime_utr;Parent=Msa1001200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
