AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1394540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1394540 MtrunA17_Chr4g0040821 97.797 227 5 0 1 227 711 937 5.75e-163 474
Msa1394540 MtrunA17_Chr4g0038061 85.774 239 22 1 1 227 718 956 1.23e-146 432
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1394540 AT1G17680.3 67.265 223 73 0 4 226 673 895 4.67e-108 331
Msa1394540 AT1G17680.2 67.265 223 73 0 4 226 673 895 4.67e-108 331
Msa1394540 AT1G17680.1 67.265 223 73 0 4 226 673 895 4.67e-108 331

Find 229 sgRNAs with CRISPR-Local

Find 1031 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTTAACTTTCAAATTTA+AGG 0.080716 tig0021860:-45545 None:intergenic
GGTGGTAGTCTTCCAATTTC+TGG 0.082870 tig0021860:-41003 None:intergenic
CGAAATACGCTATTTGTTTC+TGG 0.100990 tig0021860:-51347 None:intergenic
CATTGTCTTGTAGTATTTCT+AGG 0.150542 tig0021860:-48790 None:intergenic
AGAGGAGGAATTAATGAATT+TGG 0.152418 tig0021860:+41493 Msa1394540:five_prime_UTR
CTCGGTACTCCATCGATTTC+TGG 0.226719 tig0021860:-41024 None:intergenic
AGCATTCCTCTACAATAATT+TGG 0.233608 tig0021860:+53020 Msa1394540:CDS
TGTTCAATTGTACCAGAAAT+TGG 0.235218 tig0021860:+40991 Msa1394540:five_prime_UTR
TAGTAGATGGTTTCTGTATA+TGG 0.237895 tig0021860:+54886 Msa1394540:three_prime_UTR
ATGAGAAGGTGATTGCTATT+AGG 0.244036 tig0021860:+54554 Msa1394540:CDS
TGAGAAGGTGATTGCTATTA+GGG 0.256786 tig0021860:+54555 Msa1394540:CDS
GATGATCTTCATCCTCCTTC+TGG 0.260335 tig0021860:-40763 None:intergenic
GCAAGGGAAGATGATATTTC+TGG 0.262174 tig0021860:+41452 Msa1394540:five_prime_UTR
CGCCTTAATTTCCATCAATA+TGG 0.262883 tig0021860:-45467 None:intergenic
TGCTTTCGAAATACAATAAC+TGG 0.275722 tig0021860:-44494 None:intergenic
TACCATATTGATGGAAATTA+AGG 0.286308 tig0021860:+45465 Msa1394540:five_prime_UTR
AAGAAAATTCATCATCAAAA+TGG 0.291614 tig0021860:+40730 None:intergenic
TTGTCTCCTCCAAAGGATTC+TGG 0.294300 tig0021860:+48881 Msa1394540:five_prime_UTR
ACTCTTTATAAACACTTATC+AGG 0.297713 tig0021860:+51476 Msa1394540:five_prime_UTR
TGATACGGGTCAGGTAAATT+TGG 0.302254 tig0021860:-42936 None:intergenic
TCCCAAAGTGATGAATCTTT+TGG 0.304300 tig0021860:-43038 None:intergenic
GAGGAGGAATTAATGAATTT+GGG 0.312899 tig0021860:+41494 Msa1394540:five_prime_UTR
ATAGCGTATTTCGAGGATTC+AGG 0.315272 tig0021860:+51357 Msa1394540:five_prime_UTR
CAATATATTTATTTAGTAGA+TGG 0.317308 tig0021860:+54873 Msa1394540:three_prime_UTR
CAGATCAGATGATGAGGTTA+TGG 0.318178 tig0021860:-51381 None:intergenic
GGCCTTGGTCAACCTGGCGC+TGG 0.319693 tig0021860:+52954 Msa1394540:CDS
CTTTCCCCTCCTCAACTAGA+AGG 0.325341 tig0021860:-48838 None:intergenic
TCCAAAAGATTCATCACTTT+GGG 0.330712 tig0021860:+43037 Msa1394540:five_prime_UTR
ACACAATCAAAACCTTGTTT+AGG 0.335593 tig0021860:-52442 None:intergenic
ACAAACTGCAAATTATCTTC+AGG 0.336314 tig0021860:+54769 Msa1394540:three_prime_UTR
GCTTTAACTTTCAAATTTAA+GGG 0.357085 tig0021860:-45544 None:intergenic
GCCTTCTAAGACTAATATCT+TGG 0.358473 tig0021860:-44531 None:intergenic
ACGTGCTTGCTTGCATTCTC+TGG 0.359617 tig0021860:-46391 None:intergenic
CAATTAGGTCGAAAGCTTCC+AGG 0.364510 tig0021860:+51714 Msa1394540:intron
CTCCAAAAGATTCATCACTT+TGG 0.366950 tig0021860:+43036 Msa1394540:five_prime_UTR
AAAGATCATTGTTCCGTTTG+AGG 0.368120 tig0021860:+54733 Msa1394540:CDS
GCTCAACTTGACCACACTTT+TGG 0.370971 tig0021860:-45366 None:intergenic
CATTTCCAATTGTACTGATC+TGG 0.371163 tig0021860:+51433 Msa1394540:five_prime_UTR
GGAGCTGTCCATGGTGCAAT+TGG 0.371499 tig0021860:+42966 Msa1394540:five_prime_UTR
TGTCTTTGAATCATTGCTGC+TGG 0.372356 tig0021860:-54947 None:intergenic
TGGGGATCATGAAAATGAAA+TGG 0.381145 tig0021860:+42986 Msa1394540:five_prime_UTR
TCTACTTGGTACCATATTGA+TGG 0.390259 tig0021860:+45456 Msa1394540:five_prime_UTR
AAAGCCGAGGCAGTGGCCTC+TGG 0.397065 tig0021860:+51782 Msa1394540:five_prime_UTR
TATCAATTTAACTCTAAGAT+TGG 0.400611 tig0021860:+52135 Msa1394540:five_prime_UTR
CAGTGGAGGAAGATCAATTC+AGG 0.404404 tig0021860:+40918 Msa1394540:five_prime_UTR
CCTTCTAAGACTAATATCTT+GGG 0.404695 tig0021860:-44530 None:intergenic
ACACTTGCATTTACTCCATC+TGG 0.405571 tig0021860:-45427 None:intergenic
CCCAAGATATTAGTCTTAGA+AGG 0.407399 tig0021860:+44530 Msa1394540:five_prime_UTR
TGCTGCAGGGCCAATCAAAA+AGG 0.409511 tig0021860:+51276 Msa1394540:intron
GAGCTGTCCATGGTGCAATT+GGG 0.409612 tig0021860:+42967 Msa1394540:five_prime_UTR
GAGATCTTGAGAAAAGAGTA+AGG 0.413274 tig0021860:+51312 Msa1394540:five_prime_UTR
GGGGATCATGAAAATGAAAT+GGG 0.416645 tig0021860:+42987 Msa1394540:five_prime_UTR
GCCTTGGTCAACCTGGCGCT+GGG 0.420149 tig0021860:+52955 Msa1394540:CDS
CAAAGACATGCTGAAGTGTT+TGG 0.425167 tig0021860:+54962 Msa1394540:three_prime_UTR
CAAACTGCAAATTATCTTCA+GGG 0.427965 tig0021860:+54770 Msa1394540:three_prime_UTR
GCTTATCAGACAAAATATAA+AGG 0.428663 tig0021860:-54807 None:intergenic
AGATTAACCAATGGATTCTC+AGG 0.429542 tig0021860:-52828 None:intergenic
ACCGTACAATGCGTCGTCTT+CGG 0.429641 tig0021860:-40822 None:intergenic
TGCTAGATGTTATCGATCCT+TGG 0.430229 tig0021860:+47899 Msa1394540:five_prime_UTR
GCAGACTCATTGATGGGTCT+TGG 0.435759 tig0021860:+46433 Msa1394540:five_prime_UTR
TTCCTTGTTGTCTCCTCCAA+AGG 0.436418 tig0021860:+48874 Msa1394540:five_prime_UTR
GTCTTTGAATCATTGCTGCT+GGG 0.437041 tig0021860:-54946 None:intergenic
TGTTGAAGCACGCATAGCTT+TGG 0.438227 tig0021860:+48811 Msa1394540:five_prime_UTR
GAATGAAGAGGAAGAGGAAG+AGG 0.439936 tig0021860:+40880 Msa1394540:five_prime_UTR
CACAAGGGAGAATCTGTGTT+AGG 0.442926 tig0021860:-51947 None:intergenic
ACAAACCAGATCAGTACAAT+TGG 0.443824 tig0021860:-51438 None:intergenic
TTAAATTTGAAAGTTAAAGC+TGG 0.445910 tig0021860:+45547 Msa1394540:five_prime_UTR
TGTGAATGTAAGTCTCCCTT+TGG 0.449427 tig0021860:+49087 Msa1394540:five_prime_UTR
GGAATCTGCCATGTTCATCT+TGG 0.450294 tig0021860:+45568 Msa1394540:five_prime_UTR
TCTCATTCTTCTCAGTAGAC+AGG 0.455477 tig0021860:-52168 None:intergenic
TGGAGGAGACAACAAGGAAA+TGG 0.456082 tig0021860:-48870 None:intergenic
AGATCAGATGATGAGGTTAT+GGG 0.456324 tig0021860:-51380 None:intergenic
TTACAAGTACCAGAATCCTT+TGG 0.456803 tig0021860:-48890 None:intergenic
TGCTTGTTTCCTTTCTTCCA+AGG 0.456939 tig0021860:-47916 None:intergenic
TCGTTGTCTTCTATCGCCCT+TGG 0.458096 tig0021860:-40785 None:intergenic
GGAATTAATGAATTTGGGAC+AGG 0.462807 tig0021860:+41499 Msa1394540:five_prime_UTR
GTACTGATCTGGTTTGTAAT+GGG 0.463685 tig0021860:+51444 Msa1394540:five_prime_UTR
GCTTTCTGTTGTCGAGAGCT+CGG 0.464166 tig0021860:-41042 None:intergenic
TACAGAAAACAAGGTGATGC+TGG 0.465050 tig0021860:+44466 Msa1394540:intron
TCCTTGCCGCATCTTGATGA+TGG 0.467630 tig0021860:-52779 None:intergenic
GAAGTCTGAAACCCAGCGCC+AGG 0.469209 tig0021860:-52966 None:intergenic
ATTGTCTTGTAGTATTTCTA+GGG 0.472825 tig0021860:-48789 None:intergenic
GTTATCGATCCTTGGAAGAA+AGG 0.473441 tig0021860:+47907 Msa1394540:five_prime_UTR
TCAAATATTACCTTTCGTCT+AGG 0.473511 tig0021860:-49136 None:intergenic
TAGAACAATCTCAAGTGGTT+GGG 0.475771 tig0021860:+45512 Msa1394540:five_prime_UTR
CAAGGGAAGATGATATTTCT+GGG 0.480036 tig0021860:+41453 Msa1394540:five_prime_UTR
CATCAATGAGTCTGCGACCT+CGG 0.480689 tig0021860:-46425 None:intergenic
ATTTGTCATGCCTTGTATCT+CGG 0.480929 tig0021860:-52677 None:intergenic
GAGAAAGAAAGCCGAGGCAG+TGG 0.482279 tig0021860:+51775 Msa1394540:five_prime_UTR
AAGCATCAGTGTGTTGTACA+AGG 0.483840 tig0021860:+52994 Msa1394540:CDS
CCTGACCCGTATCACATCCT+TGG 0.485736 tig0021860:+42945 Msa1394540:five_prime_UTR
TTCTGGTACAATTGAACACT+GGG 0.488096 tig0021860:-40986 None:intergenic
GGCTTCCCTTCTAGTTGAGG+AGG 0.488281 tig0021860:+48832 Msa1394540:five_prime_UTR
AATGATCATATAACCTCAAA+CGG 0.492460 tig0021860:-54746 None:intergenic
ATTACCTTTCGTCTAGGAGC+TGG 0.492478 tig0021860:-49130 None:intergenic
TGATCTGGTTTGTAATGGGA+GGG 0.494598 tig0021860:+51448 Msa1394540:five_prime_UTR
ATTCTGAAAAGTCAAATAGA+TGG 0.495172 tig0021860:+48996 Msa1394540:five_prime_UTR
TGTACTGATCTGGTTTGTAA+TGG 0.495777 tig0021860:+51443 Msa1394540:five_prime_UTR
CTGCGAAGGTTGCAGTAACC+AGG 0.496459 tig0021860:-54640 None:intergenic
CCAAGGATGTGATACGGGTC+AGG 0.497482 tig0021860:-42945 None:intergenic
GGAGATCTGCAAGAACAGTC+AGG 0.497562 tig0021860:+53041 Msa1394540:CDS
TACTAACATCAATGATTAGC+TGG 0.498458 tig0021860:-51997 None:intergenic
TTTGGCTTCCCTTCTAGTTG+AGG 0.498866 tig0021860:+48829 Msa1394540:five_prime_UTR
CACATCCTTGGAGCTGTCCA+TGG 0.499813 tig0021860:+42957 Msa1394540:five_prime_UTR
ATCTGCATTTAATCTACAAA+AGG 0.500227 tig0021860:+54677 Msa1394540:CDS
CGAGGTCGCAGACTCATTGA+TGG 0.502814 tig0021860:+46426 Msa1394540:five_prime_UTR
AGGTACGGCCTTGGTCAACC+TGG 0.503195 tig0021860:+52948 Msa1394540:intron
CCATGTTCATCTTGGAAACA+TGG 0.503774 tig0021860:+45576 Msa1394540:five_prime_UTR
GAAGAGGAAGAGGAAGAGGA+AGG 0.504576 tig0021860:+40884 Msa1394540:five_prime_UTR
GAAACAAATAGCGTATTTCG+AGG 0.505628 tig0021860:+51350 Msa1394540:five_prime_UTR
AATCTTTATACAACATAGCT+CGG 0.507245 tig0021860:+54488 Msa1394540:CDS
GTCGGAGAATGAAGAGGAAG+AGG 0.507955 tig0021860:+40874 Msa1394540:five_prime_UTR
GCTTCCCTTCTAGTTGAGGA+GGG 0.511143 tig0021860:+48833 Msa1394540:five_prime_UTR
GAGGAAGATCAATTCAGGTT+CGG 0.513981 tig0021860:+40923 Msa1394540:five_prime_UTR
TGTAATCTTCACAAAGATGA+AGG 0.514832 tig0021860:+51968 Msa1394540:five_prime_UTR
CAAGTACCAGAATCCTTTGG+AGG 0.520382 tig0021860:-48887 None:intergenic
GAAAAGATATCACAAATGTT+CGG 0.522632 tig0021860:+42068 Msa1394540:five_prime_UTR
ACCGAAGACGACGCATTGTA+CGG 0.529389 tig0021860:+40821 Msa1394540:five_prime_UTR
AGACTTCTTCTAAGAAGGCA+AGG 0.529519 tig0021860:+41435 Msa1394540:five_prime_UTR
GATCTGGTTTGTAATGGGAG+GGG 0.529978 tig0021860:+51449 Msa1394540:five_prime_UTR
CTCATTCTTCTCAGTAGACA+GGG 0.532616 tig0021860:-52167 None:intergenic
TGGTTTCTGTATATGGTTGG+TGG 0.532817 tig0021860:+54893 Msa1394540:three_prime_UTR
TTTCTGGTACAATTGAACAC+TGG 0.535877 tig0021860:-40987 None:intergenic
CCATGTTTCCAAGATGAACA+TGG 0.536692 tig0021860:-45576 None:intergenic
TGACTCAGATGATGAGCCTC+AGG 0.539502 tig0021860:+51823 Msa1394540:five_prime_UTR
TTTGGGAAAGGCTCTTTGTG+TGG 0.539920 tig0021860:+43054 Msa1394540:five_prime_UTR
ATAGAACAATCTCAAGTGGT+TGG 0.540791 tig0021860:+45511 Msa1394540:five_prime_UTR
TGGAAACATGGAAATCGCTC+AGG 0.540833 tig0021860:+45588 Msa1394540:five_prime_UTR
AATAATGTACCGTGTCATAA+CGG 0.541071 tig0021860:-42118 None:intergenic
TGCACTAAAAGAAGCAGCTA+AGG 0.541473 tig0021860:+44642 Msa1394540:five_prime_UTR
AGCTTGGAATTGCTACTACA+AGG 0.541630 tig0021860:+52501 Msa1394540:CDS
ATGTGTTGCATGAAGTTGTC+AGG 0.541653 tig0021860:+42907 Msa1394540:five_prime_UTR
AAAACCTTGTTTAGGATCTG+TGG 0.541774 tig0021860:-52434 None:intergenic
TGAAGAGACTTCTTCTAAGA+AGG 0.542455 tig0021860:+41430 Msa1394540:five_prime_UTR
AAGATTCATCACTTTGGGAA+AGG 0.544028 tig0021860:+43042 Msa1394540:five_prime_UTR
ATGTTTCTTAGGTACGGCCT+TGG 0.545130 tig0021860:+52939 Msa1394540:intron
CCATTGGTTAATCTTTGTGT+CGG 0.546202 tig0021860:+52837 Msa1394540:CDS
ACTTCTGCCTGAGAATCCAT+TGG 0.549095 tig0021860:+52821 Msa1394540:CDS
ATCTTTATACAACATAGCTC+GGG 0.550470 tig0021860:+54489 Msa1394540:CDS
CTTCCCTTCTAGTTGAGGAG+GGG 0.550556 tig0021860:+48834 Msa1394540:five_prime_UTR
TAAACTGATGCGCAGAAATG+AGG 0.550840 tig0021860:-52746 None:intergenic
CTGAAAAGTCAAATAGATGG+TGG 0.552727 tig0021860:+48999 Msa1394540:five_prime_UTR
TGCGTCGTCTTCGGTGTCGA+CGG 0.553341 tig0021860:-40813 None:intergenic
AGATGGTTTCTGTATATGGT+TGG 0.553352 tig0021860:+54890 Msa1394540:three_prime_UTR
CAGTGGCCTCTGGAATTGAC+TGG 0.555068 tig0021860:+51792 Msa1394540:five_prime_UTR
CAGCTCCAAGGATGTGATAC+GGG 0.558237 tig0021860:-42950 None:intergenic
GCAAGTGTAGTTGATCTACT+TGG 0.559239 tig0021860:+45442 Msa1394540:five_prime_UTR
CTGATCTGGTTTGTAATGGG+AGG 0.560079 tig0021860:+51447 Msa1394540:five_prime_UTR
AATTAGGTCGAAAGCTTCCA+GGG 0.561911 tig0021860:+51715 Msa1394540:intron
ACAGCTCCAAGGATGTGATA+CGG 0.562158 tig0021860:-42951 None:intergenic
TCAGAGATTCGTGTACCAAA+GGG 0.562471 tig0021860:-49102 None:intergenic
CTTCTAAGACTAATATCTTG+GGG 0.563281 tig0021860:-44529 None:intergenic
TTCAGAGATTCGTGTACCAA+AGG 0.570873 tig0021860:-49103 None:intergenic
AGTTACCGGTGAGGTTGTTG+CGG 0.571020 tig0021860:-41073 None:intergenic
GTTCATAGAACAATCTCAAG+TGG 0.571430 tig0021860:+45507 Msa1394540:five_prime_UTR
GCAAAGGTATAGCGAAGCAT+TGG 0.573738 tig0021860:+52108 Msa1394540:five_prime_UTR
ATGCACATAGTGTTGCAGCT+TGG 0.575842 tig0021860:+52485 Msa1394540:CDS
TACCGGTGAGGTTGTTGCGG+TGG 0.576570 tig0021860:-41070 None:intergenic
AGCTGTCCATGGTGCAATTG+GGG 0.576733 tig0021860:+42968 Msa1394540:five_prime_UTR
TTTCCCCTCCTCAACTAGAA+GGG 0.577242 tig0021860:-48837 None:intergenic
GACTGGAAAACCGAGATACA+AGG 0.579639 tig0021860:+52667 Msa1394540:intron
AACCACCGCAACAACCTCAC+CGG 0.580043 tig0021860:+41068 Msa1394540:five_prime_UTR
AATGGAAGTGATTAACCAGA+AGG 0.581471 tig0021860:+40748 Msa1394540:five_prime_UTR
CGGAGAAGAAGAAGACGCGT+CGG 0.581986 tig0021860:+40856 Msa1394540:five_prime_UTR
ATTTAATCTACAAAAGGAGT+GGG 0.585090 tig0021860:+54683 Msa1394540:CDS
TTGTACGGTGCGGAAGAGAA+CGG 0.590207 tig0021860:+40836 Msa1394540:five_prime_UTR
AGGAGGATGAAGATCATCCA+AGG 0.591354 tig0021860:+40768 Msa1394540:five_prime_UTR
AGATCTTGAGAAAAGAGTAA+GGG 0.592212 tig0021860:+51313 Msa1394540:five_prime_UTR
AGATCTCCAAATTATTGTAG+AGG 0.594686 tig0021860:-53026 None:intergenic
TGAATTTGGGACAGGGCAAG+AGG 0.596139 tig0021860:+41507 Msa1394540:five_prime_UTR
TGTAAGCTGCCTCTCTGCGA+AGG 0.596269 tig0021860:-54654 None:intergenic
GGCAGCAATATATTATGAGA+AGG 0.596270 tig0021860:+54540 Msa1394540:CDS
AATTCCAGAGGCCACTGCCT+CGG 0.597422 tig0021860:-51786 None:intergenic
GTCATTGAAAATCACAAACC+TGG 0.598729 tig0021860:+54622 Msa1394540:CDS
ATGCATTAGCATCCTTGCAA+AGG 0.599277 tig0021860:+52092 Msa1394540:five_prime_UTR
TGATAAGTGTTTATAAAGAG+TGG 0.601914 tig0021860:-51474 None:intergenic
CATGATCCCCAATTGCACCA+TGG 0.602297 tig0021860:-42974 None:intergenic
TCATGTTGGTCTTGTAACAC+TGG 0.603510 tig0021860:+54519 Msa1394540:CDS
GTTGCATGAAGTTGTCAGGC+TGG 0.604528 tig0021860:+42911 Msa1394540:five_prime_UTR
GACTTCTTCTAAGAAGGCAA+GGG 0.604579 tig0021860:+41436 Msa1394540:five_prime_UTR
TGAAAAGTCAAATAGATGGT+GGG 0.604915 tig0021860:+49000 Msa1394540:five_prime_UTR
TGCTTCGCTATACCTTTGCA+AGG 0.605006 tig0021860:-52104 None:intergenic
GCCATCATCAAGATGCGGCA+AGG 0.607500 tig0021860:+52778 Msa1394540:CDS
ATTCCTCCTCTACATCAGCT+AGG 0.607922 tig0021860:-41481 None:intergenic
CTTTAGTTCTACCAAAAGTG+TGG 0.610054 tig0021860:+45355 Msa1394540:intron
CGGCAACGGTGTAAATCCGT+TGG 0.610408 tig0021860:+40943 Msa1394540:five_prime_UTR
GAAGATGATATTTCTGGGGT+AGG 0.611497 tig0021860:+41458 Msa1394540:five_prime_UTR
ATCTTTGTGAAGATTACACA+AGG 0.612893 tig0021860:-51963 None:intergenic
TGCGCAGAAATGAGGATAGG+AGG 0.613954 tig0021860:-52738 None:intergenic
ATCCTTTGGAGGAGACAACA+AGG 0.615714 tig0021860:-48876 None:intergenic
AGACGCGTCGGAGAATGAAG+AGG 0.617182 tig0021860:+40868 Msa1394540:five_prime_UTR
TACGAGTCGCCGTTATGACA+CGG 0.618646 tig0021860:+42109 Msa1394540:five_prime_UTR
GAGGTCGCAGACTCATTGAT+GGG 0.622019 tig0021860:+46427 Msa1394540:five_prime_UTR
TGATGCGCAGAAATGAGGAT+AGG 0.622178 tig0021860:-52741 None:intergenic
GGAAGGAGAAAACGATACAG+TGG 0.622714 tig0021860:+40901 Msa1394540:five_prime_UTR
CATTTAATCTACAAAAGGAG+TGG 0.623135 tig0021860:+54682 Msa1394540:CDS
GATCAATTCAGGTTCGGCAA+CGG 0.623537 tig0021860:+40929 Msa1394540:five_prime_UTR
GTGTTACAAGACCAACATGA+TGG 0.623553 tig0021860:-54516 None:intergenic
GGCGACTCGTATAGTGCATG+AGG 0.625347 tig0021860:-42097 None:intergenic
CACTCACAGATCAGATGATG+AGG 0.627325 tig0021860:-51387 None:intergenic
GGAGGATGAAGATCATCCAA+GGG 0.630313 tig0021860:+40769 Msa1394540:five_prime_UTR
ACCCAGCGCCAGGTTGACCA+AGG 0.630990 tig0021860:-52956 None:intergenic
GCTCGGGCATACCATCATGT+TGG 0.635857 tig0021860:+54505 Msa1394540:CDS
TGTTCCAGCTCCTAGACGAA+AGG 0.638282 tig0021860:+49126 Msa1394540:five_prime_UTR
TTGCACCATGGACAGCTCCA+AGG 0.639528 tig0021860:-42962 None:intergenic
AGGCCTAGCTGATGTAGAGG+AGG 0.641327 tig0021860:+41478 Msa1394540:five_prime_UTR
GGAAGTGATTAACCAGAAGG+AGG 0.641592 tig0021860:+40751 Msa1394540:five_prime_UTR
AGACTACCACCAGAAATCGA+TGG 0.645298 tig0021860:+41015 Msa1394540:five_prime_UTR
GATTAAGTTAGTTACCGGTG+AGG 0.657054 tig0021860:-41082 None:intergenic
TATCTGAAGAGTAAACCAGA+TGG 0.662621 tig0021860:+45412 Msa1394540:five_prime_UTR
TTCTAAGACTAATATCTTGG+GGG 0.668365 tig0021860:-44528 None:intergenic
CCGACACAAAGATTAACCAA+TGG 0.670200 tig0021860:-52837 None:intergenic
GGTACTCCATCGATTTCTGG+TGG 0.670533 tig0021860:-41021 None:intergenic
CTGTTACGTACGAAGTCCAA+CGG 0.670958 tig0021860:-40959 None:intergenic
AGGAGAAAACGATACAGTGG+AGG 0.671026 tig0021860:+40904 Msa1394540:five_prime_UTR
AACACCACAGATCCTAAACA+AGG 0.677930 tig0021860:+52430 Msa1394540:CDS
GAATTAATGAATTTGGGACA+GGG 0.678680 tig0021860:+41500 Msa1394540:five_prime_UTR
GGTAGGCCTAGCTGATGTAG+AGG 0.679989 tig0021860:+41475 Msa1394540:five_prime_UTR
ATGTAGCCATCATCAAGATG+CGG 0.682298 tig0021860:+52773 Msa1394540:CDS
GCGACTCGTATAGTGCATGA+GGG 0.688371 tig0021860:-42096 None:intergenic
ACTTAGCCAGTCAATTCCAG+AGG 0.702156 tig0021860:-51798 None:intergenic
GCTACTACAAGGTCGTATCG+AGG 0.704787 tig0021860:+52512 Msa1394540:CDS
AAGGGAAGATGATATTTCTG+GGG 0.706308 tig0021860:+41454 Msa1394540:five_prime_UTR
TCTTTGTGAAGATTACACAA+GGG 0.712083 tig0021860:-51962 None:intergenic
GAAGGAGAGAAAGAAAGCCG+AGG 0.715440 tig0021860:+51769 Msa1394540:five_prime_UTR
TTTAATCTACAAAAGGAGTG+GGG 0.720229 tig0021860:+54684 Msa1394540:CDS
TTACTGCAACCTTCGCAGAG+AGG 0.724847 tig0021860:+54645 Msa1394540:CDS
AGACGACGCATTGTACGGTG+CGG 0.742584 tig0021860:+40826 Msa1394540:five_prime_UTR
GCACGTTGAGTTGATCACCG+AGG 0.799843 tig0021860:+46408 Msa1394540:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATTTAGTAAAAAATAA+AGG + tig0021860:46573-46592 Msa1394540:intron 10.0%
!! TTGATTTAGTAAAAAATAAA+GGG + tig0021860:46574-46593 Msa1394540:intron 10.0%
!! AAATCAAAATAAAAAATGAA+TGG + tig0021860:52286-52305 Msa1394540:intron 10.0%
!! AATTTATTTATGCATTAATA+AGG + tig0021860:54430-54449 Msa1394540:intron 10.0%
!!! AAATAAATAATTTGTGTGTA+CGG + tig0021860:43204-43223 Msa1394540:intron 15.0%
!! GTTAATTTAATTGTGTAATA+GGG - tig0021860:43888-43907 None:intergenic 15.0%
!! AGTTAATTTAATTGTGTAAT+AGG - tig0021860:43889-43908 None:intergenic 15.0%
!! TTGTAATTAATAACTAATCA+GGG - tig0021860:44147-44166 None:intergenic 15.0%
!! ATTGTAATTAATAACTAATC+AGG - tig0021860:44148-44167 None:intergenic 15.0%
!! TTTCTACTATATATCTATAT+CGG + tig0021860:44240-44259 Msa1394540:intron 15.0%
!!! AAAACTTTTTTGTCATTTTA+GGG - tig0021860:44328-44347 None:intergenic 15.0%
!! TTAAACAATCAGTTTATATA+TGG + tig0021860:44404-44423 Msa1394540:intron 15.0%
!! TTAATGATTATATGCAATAT+AGG + tig0021860:44752-44771 Msa1394540:intron 15.0%
!!! TAATTTTTATAAGAAGCATT+AGG + tig0021860:44985-45004 Msa1394540:intron 15.0%
!! TTTAAAAAAAATTCAGACTT+TGG - tig0021860:45829-45848 None:intergenic 15.0%
!!! GTAAATCAAATTGTATTTTA+GGG + tig0021860:46154-46173 Msa1394540:intron 15.0%
!!! AATTATACGAGTTTTTATTT+TGG + tig0021860:46300-46319 Msa1394540:intron 15.0%
!!! ATTGAATTATTTTAAGATGT+TGG + tig0021860:46471-46490 Msa1394540:five_prime_UTR 15.0%
!! ATAGTAAAAATGAAAATGTA+CGG + tig0021860:46500-46519 Msa1394540:intron 15.0%
!!! TTTTCTGTTTTGATTTTATT+TGG + tig0021860:46546-46565 Msa1394540:intron 15.0%
!!! TTTCTGTTTTGATTTTATTT+GGG + tig0021860:46547-46566 Msa1394540:intron 15.0%
!!! GAGTTTTTATGTATATTTAT+AGG + tig0021860:47230-47249 Msa1394540:intron 15.0%
!! TATATTTATAGGTTAATTGA+TGG + tig0021860:47241-47260 Msa1394540:intron 15.0%
!! ATATTTATAGGTTAATTGAT+GGG + tig0021860:47242-47261 Msa1394540:intron 15.0%
!! CTTAATATAAACATAAATGA+AGG + tig0021860:47294-47313 Msa1394540:intron 15.0%
!!! AAATCAATATTAGTTTAATC+AGG + tig0021860:47774-47793 Msa1394540:intron 15.0%
!! TTTATTAACAACAGAATTTA+AGG + tig0021860:47971-47990 Msa1394540:intron 15.0%
!!! AAATGTTTCTTTTAGAATTT+GGG + tig0021860:48095-48114 Msa1394540:intron 15.0%
!!! TGATACTATTTTAAAATTTG+AGG + tig0021860:48330-48349 Msa1394540:intron 15.0%
!! ATTAAAAGAAATGAGAATAT+GGG - tig0021860:49714-49733 None:intergenic 15.0%
!! ATAGAAATAAAACTGAAAAA+AGG - tig0021860:49836-49855 None:intergenic 15.0%
!!! TTTTTTCAGTTTTATTTCTA+TGG + tig0021860:49835-49854 Msa1394540:intron 15.0%
!! GTCAAAAAAAAAAATCTTAT+GGG - tig0021860:50846-50865 None:intergenic 15.0%
!! TGTCAAAAAAAAAAATCTTA+TGG - tig0021860:50847-50866 None:intergenic 15.0%
!!! CATATTTTAATATTTATGGT+AGG + tig0021860:50954-50973 Msa1394540:intron 15.0%
!!! TATAACTAATACTTTTATGA+AGG + tig0021860:51222-51241 Msa1394540:intron 15.0%
!!! TTACATTGTTTTATTCAATT+AGG + tig0021860:51699-51718 Msa1394540:intron 15.0%
!! ATTCATATAGTGAATTATTT+CGG + tig0021860:53302-53321 Msa1394540:intron 15.0%
!! GTTATAAAGATATATAAGTT+TGG - tig0021860:53782-53801 None:intergenic 15.0%
!! CAAAATATCTTAAAATATCT+TGG + tig0021860:53943-53962 Msa1394540:intron 15.0%
!!! AGAAAATTGATAATATGAAT+AGG - tig0021860:54057-54076 None:intergenic 15.0%
!! CAATATATTTATTTAGTAGA+TGG + tig0021860:54873-54892 Msa1394540:three_prime_UTR 15.0%
!!! TAATCCTTTTTAATTTCTCT+AGG + tig0021860:41100-41119 Msa1394540:intron 20.0%
!!! AATCCTTTTTAATTTCTCTA+GGG + tig0021860:41101-41120 Msa1394540:intron 20.0%
!!! TTTGTTAAGTTCTTTTAGAA+AGG + tig0021860:41615-41634 Msa1394540:intron 20.0%
!!! TGCATTTGGTATTATAATTT+TGG + tig0021860:41687-41706 Msa1394540:intron 20.0%
!! GAATATAAACAACATTGAAA+AGG - tig0021860:41994-42013 None:intergenic 20.0%
!! CCAATTTATAAATATCTTTC+AGG - tig0021860:42391-42410 None:intergenic 20.0%
!! CCTGAAAGATATTTATAAAT+TGG + tig0021860:42388-42407 Msa1394540:intron 20.0%
!!! AACATCTTATAATTTGTCTT+CGG - tig0021860:42459-42478 None:intergenic 20.0%
!! TACTCTTAGAAATTTGTATT+GGG - tig0021860:42684-42703 None:intergenic 20.0%
!!! TTTCTTTAAAGTTACTTTTG+TGG + tig0021860:43116-43135 Msa1394540:intron 20.0%
!!! GATTCAAATGTTTTGTAATT+TGG + tig0021860:43333-43352 Msa1394540:intron 20.0%
!! ACGAATAGTAATTTAAATGT+TGG - tig0021860:43529-43548 None:intergenic 20.0%
!!! TACTATTCGTTATTTGATTT+AGG + tig0021860:43539-43558 Msa1394540:intron 20.0%
!! ATATGTTATAGCAGTTATTA+AGG - tig0021860:43860-43879 None:intergenic 20.0%
!!! AAAAGGTACAAAATTATTGT+TGG - tig0021860:44046-44065 None:intergenic 20.0%
!! ATTATGATGACAATCATAAA+AGG - tig0021860:44063-44082 None:intergenic 20.0%
!! TACAATTATAATTGGCAAAT+TGG + tig0021860:44162-44181 Msa1394540:intron 20.0%
!!! CAAAACTTTTTTGTCATTTT+AGG - tig0021860:44329-44348 None:intergenic 20.0%
!!! ATTTTCAAATACAGAAAACA+AGG + tig0021860:44457-44476 Msa1394540:intron 20.0%
!! ATAGGCTATAATTATAGATA+CGG - tig0021860:44822-44841 None:intergenic 20.0%
!!! TTTCATATTTTGATTGTGTT+GGG - tig0021860:45039-45058 None:intergenic 20.0%
!!! TTTTCATATTTTGATTGTGT+TGG - tig0021860:45040-45059 None:intergenic 20.0%
!!! GCTTTAACTTTCAAATTTAA+GGG - tig0021860:45547-45566 None:intergenic 20.0%
!!! AGCTTTAACTTTCAAATTTA+AGG - tig0021860:45548-45567 None:intergenic 20.0%
!! TTAAATTTGAAAGTTAAAGC+TGG + tig0021860:45547-45566 Msa1394540:five_prime_UTR 20.0%
!!! TGTTTTGATTTTTTATGTTG+TGG + tig0021860:46027-46046 Msa1394540:intron 20.0%
!! TAATTAGAAAGCTAAAAAGA+TGG - tig0021860:46110-46129 None:intergenic 20.0%
!!! CGTAAATCAAATTGTATTTT+AGG + tig0021860:46153-46172 Msa1394540:intron 20.0%
!! TACATTTATTCATGATTAAC+AGG + tig0021860:46348-46367 Msa1394540:intron 20.0%
!!! AATTATTTTAAGATGTTGGA+AGG + tig0021860:46475-46494 Msa1394540:five_prime_UTR 20.0%
!!! GTTTTCTATATTTTAACAAG+CGG + tig0021860:47169-47188 Msa1394540:intron 20.0%
!! TATTTATAGGTTAATTGATG+GGG + tig0021860:47243-47262 Msa1394540:intron 20.0%
!! CAGCAATAAAAATAGATTAT+GGG - tig0021860:47414-47433 None:intergenic 20.0%
!!! AAAGCTTATTTTAGATTTGT+TGG + tig0021860:47595-47614 Msa1394540:intron 20.0%
!!! AAGCTTATTTTAGATTTGTT+GGG + tig0021860:47596-47615 Msa1394540:intron 20.0%
!!! TATTAGTTTAATCAGGTTAA+TGG + tig0021860:47781-47800 Msa1394540:intron 20.0%
!!! AAATTTAATTTCTTTCTTGC+AGG + tig0021860:47857-47876 Msa1394540:intron 20.0%
!!! AATTTAATTTCTTTCTTGCA+GGG + tig0021860:47858-47877 Msa1394540:intron 20.0%
!!! CAAATGTTTCTTTTAGAATT+TGG + tig0021860:48094-48113 Msa1394540:intron 20.0%
!!! AATCATTTAGTTTTTTCAAC+AGG - tig0021860:49289-49308 None:intergenic 20.0%
!! TTTATGAGAATGTTATGTTA+TGG + tig0021860:49575-49594 Msa1394540:intron 20.0%
!! TTATGAGAATGTTATGTTAT+GGG + tig0021860:49576-49595 Msa1394540:intron 20.0%
!!! TGTTTTATAAAATCATGCAA+AGG + tig0021860:49618-49637 Msa1394540:intron 20.0%
!! GATTAAAAGAAATGAGAATA+TGG - tig0021860:49715-49734 None:intergenic 20.0%
!!! TTTTATTTCTATGGTGTATT+TGG + tig0021860:49844-49863 Msa1394540:intron 20.0%
!! AAAAGATAAAGGTTATTCTA+GGG + tig0021860:50486-50505 Msa1394540:intron 20.0%
!! ATTGGAAAAAAAAAAACTGT+TGG + tig0021860:50576-50595 Msa1394540:intron 20.0%
!! TTGGAAAAAAAAAAACTGTT+GGG + tig0021860:50577-50596 Msa1394540:intron 20.0%
!!! ATGTCATTGTTATTATGAAA+AGG - tig0021860:50650-50669 None:intergenic 20.0%
!! CAATGACATATATTAAAACA+TGG + tig0021860:50661-50680 Msa1394540:intron 20.0%
!! CAAGACAAAATTTCTATTTA+TGG + tig0021860:50792-50811 Msa1394540:intron 20.0%
!!! ATTTTACGATCAATGTTTTA+AGG - tig0021860:50821-50840 None:intergenic 20.0%
!!! AAAGTATTAGTTATAAAAGC+AGG - tig0021860:51217-51236 None:intergenic 20.0%
!!! CTTTTATGAAGGAAAAAAAA+AGG + tig0021860:51233-51252 Msa1394540:intron 20.0%
!! ATCAATTAACTAGAACTATT+GGG - tig0021860:51536-51555 None:intergenic 20.0%
!! AATCAATTAACTAGAACTAT+TGG - tig0021860:51537-51556 None:intergenic 20.0%
!! TTGAATAAAACAATGTAAGA+GGG - tig0021860:51697-51716 None:intergenic 20.0%
!! ATTGAATAAAACAATGTAAG+AGG - tig0021860:51698-51717 None:intergenic 20.0%
!!! TATCAATTTAACTCTAAGAT+TGG + tig0021860:52135-52154 Msa1394540:five_prime_UTR 20.0%
!!! ATAAACTAATTTGTTGTTCT+AGG + tig0021860:52350-52369 Msa1394540:intron 20.0%
!!! TAAACTAATTTGTTGTTCTA+GGG + tig0021860:52351-52370 Msa1394540:intron 20.0%
!!! CATTAATTTTCTTTTGTAGT+AGG + tig0021860:52567-52586 Msa1394540:intron 20.0%
!!! TGAACATTTTCTTCTTAAAT+GGG - tig0021860:53091-53110 None:intergenic 20.0%
!!! ATGAACATTTTCTTCTTAAA+TGG - tig0021860:53092-53111 None:intergenic 20.0%
!!! CCATTTTCTTTTTTTTTGTT+TGG - tig0021860:53265-53284 None:intergenic 20.0%
!! CCAAACAAAAAAAAAGAAAA+TGG + tig0021860:53262-53281 Msa1394540:intron 20.0%
!!! TTTATATTTTGTCTGATAAG+CGG + tig0021860:54809-54828 Msa1394540:three_prime_UTR 20.0%
! AAAAGGATTAAGTTAGTTAC+CGG - tig0021860:41090-41109 None:intergenic 25.0%
! AAACCCTAGAGAAATTAAAA+AGG - tig0021860:41107-41126 None:intergenic 25.0%
! TGTGTCAAACATATATAAGT+CGG - tig0021860:41382-41401 None:intergenic 25.0%
! TAGGATTGGATAAATGTAAT+TGG - tig0021860:41736-41755 None:intergenic 25.0%
! AAATGAACATGAGAAAATGA+AGG - tig0021860:41870-41889 None:intergenic 25.0%
! TCTAATCTAAATCCTTTCAA+GGG - tig0021860:41894-41913 None:intergenic 25.0%
! TTGAAAGGATTTAGATTAGA+GGG + tig0021860:41894-41913 Msa1394540:intron 25.0%
! GTGAAAGTAAGTTATGTTAA+AGG - tig0021860:41972-41991 None:intergenic 25.0%
! GAAAAGATATCACAAATGTT+CGG + tig0021860:42068-42087 Msa1394540:five_prime_UTR 25.0%
!!! TCACTTATACATACTTTTTC+AGG - tig0021860:42608-42627 None:intergenic 25.0%
! GTACTCTTAGAAATTTGTAT+TGG - tig0021860:42685-42704 None:intergenic 25.0%
!!! TAAGAGTACCCATTTTTATT+TGG + tig0021860:42696-42715 Msa1394540:intron 25.0%
! AAGCTGAACCAAATAAAAAT+GGG - tig0021860:42707-42726 None:intergenic 25.0%
! AAAGCTGAACCAAATAAAAA+TGG - tig0021860:42708-42727 None:intergenic 25.0%
!! AATTTAACATCAAGCTCTAA+TGG - tig0021860:42766-42785 None:intergenic 25.0%
! AAATGAATAACCATCTTACA+TGG - tig0021860:43081-43100 None:intergenic 25.0%
! GTGTATATTAATGGAACATA+TGG + tig0021860:43226-43245 Msa1394540:intron 25.0%
! AGTAATTTAAATGTTGGTCA+TGG - tig0021860:43523-43542 None:intergenic 25.0%
!!! TTTTTTTCTTTTGCATGAGA+CGG - tig0021860:43778-43797 None:intergenic 25.0%
!!! AGTCATTTGACTTTTGTAAT+TGG + tig0021860:44090-44109 Msa1394540:intron 25.0%
! ATCAGTTAAATTCAGTTACA+AGG - tig0021860:44213-44232 None:intergenic 25.0%
!!! CAAAAAAGTTTTGATGTTGT+TGG + tig0021860:44336-44355 Msa1394540:intron 25.0%
! CAGTTTATATATGGAAGAAA+TGG + tig0021860:44413-44432 Msa1394540:intron 25.0%
!! AAATGGTTAGTTACTAAGTT+GGG + tig0021860:44430-44449 Msa1394540:intron 25.0%
! GATTATATGCAATATAGGAT+TGG + tig0021860:44757-44776 Msa1394540:intron 25.0%
! TAGGCTATAATTATAGATAC+GGG - tig0021860:44821-44840 None:intergenic 25.0%
! TATAATTATAGCCTATTACC+AGG + tig0021860:44826-44845 Msa1394540:intron 25.0%
! ATAATTATAGCCTATTACCA+GGG + tig0021860:44827-44846 Msa1394540:intron 25.0%
! AGGATATAACTATATTGTGT+TGG + tig0021860:45178-45197 Msa1394540:intron 25.0%
!! GCTCATTTTATATATACATG+TGG + tig0021860:45287-45306 Msa1394540:intron 25.0%
!! CATTTTATATATACATGTGG+CGG + tig0021860:45290-45309 Msa1394540:intron 25.0%
! TACCATATTGATGGAAATTA+AGG + tig0021860:45465-45484 Msa1394540:five_prime_UTR 25.0%
! AAACCTAGCATTATATTATG+AGG - tig0021860:45691-45710 None:intergenic 25.0%
! CTAGGTTTATTGATATTTGA+GGG + tig0021860:45703-45722 Msa1394540:intron 25.0%
! ATAACATCATGAATAACAAG+CGG - tig0021860:45786-45805 None:intergenic 25.0%
!! TTTCATATTTTTCTGTGTTG+TGG + tig0021860:45865-45884 Msa1394540:intron 25.0%
! ATTCAAAGCTCTATTTAAGA+AGG - tig0021860:45906-45925 None:intergenic 25.0%
! TTCAAAAATGGTATACAAGA+TGG - tig0021860:45984-46003 None:intergenic 25.0%
! TCTCTTTCAAACTTCAAAAA+TGG - tig0021860:45996-46015 None:intergenic 25.0%
! TACGTTTGCAAAAGAAAAAA+GGG - tig0021860:46137-46156 None:intergenic 25.0%
! TTACGTTTGCAAAAGAAAAA+AGG - tig0021860:46138-46157 None:intergenic 25.0%
! TACTAAATCAAATTACCCAA+GGG - tig0021860:46565-46584 None:intergenic 25.0%
! TGAATTTCACATAGTGAATT+AGG - tig0021860:46890-46909 None:intergenic 25.0%
! AACTGTCAATAAAAGACATA+TGG + tig0021860:47045-47064 Msa1394540:intron 25.0%
! ACTGTCAATAAAAGACATAT+GGG + tig0021860:47046-47065 Msa1394540:intron 25.0%
! ATAAATGAAGGTCAATGTTA+TGG + tig0021860:47306-47325 Msa1394540:intron 25.0%
! ATTATGGGAATAAGACATAA+AGG - tig0021860:47399-47418 None:intergenic 25.0%
! GCAGCAATAAAAATAGATTA+TGG - tig0021860:47415-47434 None:intergenic 25.0%
!! GCAATTATCTCTTTTTACAA+AGG + tig0021860:47936-47955 Msa1394540:five_prime_UTR 25.0%
!! TATCTCTTTTTACAAAGGTA+AGG + tig0021860:47941-47960 Msa1394540:intron 25.0%
!! TTTTATCCTATCACAAAAAG+AGG - tig0021860:48574-48593 None:intergenic 25.0%
!! CTTTTTGTGATAGGATAAAA+AGG + tig0021860:48574-48593 Msa1394540:intron 25.0%
! ATAGAAAAAAGAGAGTCAAA+AGG + tig0021860:48599-48618 Msa1394540:intron 25.0%
! TAGAAAAAAGAGAGTCAAAA+GGG + tig0021860:48600-48619 Msa1394540:intron 25.0%
!! ATTGTCTTGTAGTATTTCTA+GGG - tig0021860:48792-48811 None:intergenic 25.0%
!! ATTCTGAAAAGTCAAATAGA+TGG + tig0021860:48996-49015 Msa1394540:five_prime_UTR 25.0%
!!! TGTAACATTTTTCAGATTAG+AGG + tig0021860:49049-49068 Msa1394540:five_prime_UTR 25.0%
!!! GTAACATTTTTCAGATTAGA+GGG + tig0021860:49050-49069 Msa1394540:five_prime_UTR 25.0%
! TCTTACAAAATTTGATTGCT+CGG + tig0021860:49318-49337 Msa1394540:intron 25.0%
! TGTGAATTAGTTGCATTTAT+TGG + tig0021860:49364-49383 Msa1394540:intron 25.0%
!!! TTAGTTGCATTTATTGGTTT+TGG + tig0021860:49370-49389 Msa1394540:intron 25.0%
!!! CATTTATTGGTTTTGGATTT+TGG + tig0021860:49377-49396 Msa1394540:intron 25.0%
!!! ATGATAATCATGCTTTAAGA+AGG + tig0021860:49490-49509 Msa1394540:intron 25.0%
!!! TGATAATCATGCTTTAAGAA+GGG + tig0021860:49491-49510 Msa1394540:intron 25.0%
!! TTCAGTTTTGCAATTAATTG+AGG + tig0021860:49522-49541 Msa1394540:intron 25.0%
! TATAAAATCATGCAAAGGAA+AGG + tig0021860:49623-49642 Msa1394540:intron 25.0%
! TTTATGGTACAAGTATGAAT+AGG - tig0021860:49737-49756 None:intergenic 25.0%
! TAGCTCCTTAAGTATATATA+AGG + tig0021860:49782-49801 Msa1394540:intron 25.0%
! GATCACCTTATATATACTTA+AGG - tig0021860:49790-49809 None:intergenic 25.0%
!!! TTTTTTGGTCTTTTTCAGAA+AGG + tig0021860:50413-50432 Msa1394540:intron 25.0%
! GAAAAGATAAAGGTTATTCT+AGG + tig0021860:50485-50504 Msa1394540:intron 25.0%
! ATGAGAAAAATAAGACTTCT+TGG - tig0021860:50535-50554 None:intergenic 25.0%
!!! TCTTATTTTTCTCATAAACG+AGG + tig0021860:50540-50559 Msa1394540:intron 25.0%
!!! CTTATTTTTCTCATAAACGA+GGG + tig0021860:50541-50560 Msa1394540:intron 25.0%
! TAGTTATAAAAGCAGGAAAA+AGG - tig0021860:51210-51229 None:intergenic 25.0%
! TGATAAGTGTTTATAAAGAG+TGG - tig0021860:51477-51496 None:intergenic 25.0%
! ACTCTTTATAAACACTTATC+AGG + tig0021860:51476-51495 Msa1394540:five_prime_UTR 25.0%
!! TAACCAGATTTTGTGTATAT+TGG + tig0021860:51906-51925 Msa1394540:intron 25.0%
!! AACCAGATTTTGTGTATATT+GGG + tig0021860:51907-51926 Msa1394540:intron 25.0%
! ACAACTGTACATTCATATTA+AGG - tig0021860:52069-52088 None:intergenic 25.0%
! ATACAATCTTGTTAAAGTTC+AGG - tig0021860:52221-52240 None:intergenic 25.0%
! TTTCTTGAAACAAGAAAAGT+TGG - tig0021860:52269-52288 None:intergenic 25.0%
! ATCTAACAAACAAACAAACA+AGG - tig0021860:52319-52338 None:intergenic 25.0%
!!! TTTTGATTGTGTAAAAGACA+TGG + tig0021860:52453-52472 Msa1394540:CDS 25.0%
! GTTATTCATCAATGTTTCTT+AGG + tig0021860:52928-52947 Msa1394540:intron 25.0%
!!! TTTTAAATGTGGTTTTGAGA+AGG + tig0021860:53691-53710 Msa1394540:intron 25.0%
!! ATGCATTGTTTTCTTTAACA+AGG + tig0021860:53868-53887 Msa1394540:intron 25.0%
!!! TTATTATGCTTTAACTTGAG+TGG + tig0021860:53903-53922 Msa1394540:intron 25.0%
!!! TATTATGCTTTAACTTGAGT+GGG + tig0021860:53904-53923 Msa1394540:intron 25.0%
! TAAGATTAGGAATTGATCAT+AGG - tig0021860:53988-54007 None:intergenic 25.0%
! GAATGTAAAAACAAGCAATA+TGG - tig0021860:54033-54052 None:intergenic 25.0%
!!! GAGATAAAAGTGTTATTGAT+TGG - tig0021860:54194-54213 None:intergenic 25.0%
! AGCATGATCCTTAAAATAAT+CGG + tig0021860:54340-54359 Msa1394540:intron 25.0%
! AATCTTTATACAACATAGCT+CGG + tig0021860:54488-54507 Msa1394540:CDS 25.0%
!!! TCATTTTGAAGTTTAGGAAT+TGG - tig0021860:54592-54611 None:intergenic 25.0%
!!! ATACTCTCATTTTGAAGTTT+AGG - tig0021860:54598-54617 None:intergenic 25.0%
! ATCTGCATTTAATCTACAAA+AGG + tig0021860:54677-54696 Msa1394540:CDS 25.0%
! ATTTAATCTACAAAAGGAGT+GGG + tig0021860:54683-54702 Msa1394540:CDS 25.0%
! AATGATCATATAACCTCAAA+CGG - tig0021860:54749-54768 None:intergenic 25.0%
!!! ATTATCTTCAGGGTTTTATT+TGG + tig0021860:54780-54799 Msa1394540:three_prime_UTR 25.0%
! GCTTATCAGACAAAATATAA+AGG - tig0021860:54810-54829 None:intergenic 25.0%
!! AGTTTTTGCTCTATTTTGTT+CGG + tig0021860:55027-55046 Msa1394540:three_prime_UTR 25.0%
TGTTCAATTGTACCAGAAAT+TGG + tig0021860:40991-41010 Msa1394540:five_prime_UTR 30.0%
! AGTTTGAATTTGAGTTCAGA+TGG + tig0021860:41134-41153 Msa1394540:intron 30.0%
! ACTTGGATTTAGTGACTTTT+TGG + tig0021860:41217-41236 Msa1394540:intron 30.0%
AAACATATATAAGTCGGATC+CGG - tig0021860:41376-41395 None:intergenic 30.0%
AGAGGAGGAATTAATGAATT+TGG + tig0021860:41493-41512 Msa1394540:five_prime_UTR 30.0%
GAGGAGGAATTAATGAATTT+GGG + tig0021860:41494-41513 Msa1394540:five_prime_UTR 30.0%
! GAATTAATGAATTTGGGACA+GGG + tig0021860:41500-41519 Msa1394540:five_prime_UTR 30.0%
GCAGAAAATTAACGAAAACA+AGG - tig0021860:41827-41846 None:intergenic 30.0%
CTCTAATCTAAATCCTTTCA+AGG - tig0021860:41895-41914 None:intergenic 30.0%
CTTGAAAGGATTTAGATTAG+AGG + tig0021860:41893-41912 Msa1394540:intron 30.0%
GCATTCTCAATTACATGTTA+TGG + tig0021860:41929-41948 Msa1394540:intron 30.0%
! TGTTGTTTATATTCCAGAAG+CGG + tig0021860:42000-42019 Msa1394540:intron 30.0%
AAAAAAAGAGGTAGGCAAAA+AGG + tig0021860:42026-42045 Msa1394540:five_prime_UTR 30.0%
AATAATGTACCGTGTCATAA+CGG - tig0021860:42121-42140 None:intergenic 30.0%
!!! ATGTTACAAGATGGTTTTGT+AGG + tig0021860:42422-42441 Msa1394540:intron 30.0%
!!! TGTTACAAGATGGTTTTGTA+GGG + tig0021860:42423-42442 Msa1394540:intron 30.0%
AAACCAACTTGAAACTTGAA+AGG - tig0021860:42644-42663 None:intergenic 30.0%
!!! AAGTTTCAAGTTGGTTTTGT+AGG + tig0021860:42647-42666 Msa1394540:intron 30.0%
!!! AGTTTCAAGTTGGTTTTGTA+GGG + tig0021860:42648-42667 Msa1394540:intron 30.0%
TTAGCTATACATTGTTGTGT+TGG + tig0021860:42866-42885 Msa1394540:intron 30.0%
TCCAAAAGATTCATCACTTT+GGG + tig0021860:43037-43056 Msa1394540:five_prime_UTR 30.0%
ATGAAGTAAACATAGTGAAG+GGG - tig0021860:43283-43302 None:intergenic 30.0%
GATGAAGTAAACATAGTGAA+GGG - tig0021860:43284-43303 None:intergenic 30.0%
CTTCACTATGTTTACTTCAT+CGG + tig0021860:43283-43302 Msa1394540:intron 30.0%
! GTGTTAATATGGCAGATTTT+TGG - tig0021860:43416-43435 None:intergenic 30.0%
AGGAGAAATAAGGAAGTAAA+TGG - tig0021860:43956-43975 None:intergenic 30.0%
AATATATGTCTCGTGTATCT+AGG - tig0021860:43976-43995 None:intergenic 30.0%
ATCTCATAGAAAATGAAGGA+AGG - tig0021860:44295-44314 None:intergenic 30.0%
GAGAATCTCATAGAAAATGA+AGG - tig0021860:44299-44318 None:intergenic 30.0%
!!! TTTTGTCATTTTAGGGTAAC+AGG - tig0021860:44321-44340 None:intergenic 30.0%
! GAAATGGTTAGTTACTAAGT+TGG + tig0021860:44429-44448 Msa1394540:intron 30.0%
TGCTTTCGAAATACAATAAC+TGG - tig0021860:44497-44516 None:intergenic 30.0%
!! TTCTAAGACTAATATCTTGG+GGG - tig0021860:44531-44550 None:intergenic 30.0%
!! CTTCTAAGACTAATATCTTG+GGG - tig0021860:44532-44551 None:intergenic 30.0%
!! CCTTCTAAGACTAATATCTT+GGG - tig0021860:44533-44552 None:intergenic 30.0%
AAATTATCAAAAAGCTGCTG+AGG + tig0021860:44582-44601 Msa1394540:five_prime_UTR 30.0%
!! TTAGTCTTTTTCTTTTGAGC+TGG + tig0021860:44665-44684 Msa1394540:intron 30.0%
! TTTTTCTTTTGAGCTGGATT+TGG + tig0021860:44671-44690 Msa1394540:intron 30.0%
TAATTATAGCCTATTACCAG+GGG + tig0021860:44828-44847 Msa1394540:intron 30.0%
ATGAAAACCAGAGAAAAAGT+TGG + tig0021860:45053-45072 Msa1394540:intron 30.0%
AATACTTCAGGGACAAAATT+AGG + tig0021860:45085-45104 Msa1394540:intron 30.0%
ATACTTCAGGGACAAAATTA+GGG + tig0021860:45086-45105 Msa1394540:intron 30.0%
!!! CACTACTTTTTTGCTTAAGT+CGG + tig0021860:45127-45146 Msa1394540:intron 30.0%
!!! ACTACTTTTTTGCTTAAGTC+GGG + tig0021860:45128-45147 Msa1394540:intron 30.0%
! GTTTTGCCAATGATAAATAC+TGG - tig0021860:45216-45235 None:intergenic 30.0%
GTATTTATCATTGGCAAAAC+TGG + tig0021860:45216-45235 Msa1394540:intron 30.0%
!! AATTTGATTTGCTTGATCAC+TGG + tig0021860:45641-45660 Msa1394540:intron 30.0%
GAACCTCATAATATAATGCT+AGG + tig0021860:45685-45704 Msa1394540:intron 30.0%
GCTAGGTTTATTGATATTTG+AGG + tig0021860:45702-45721 Msa1394540:intron 30.0%
!! ATATTTGAGGGTATCATGAA+TGG + tig0021860:45715-45734 Msa1394540:intron 30.0%
!! TATTTGAGGGTATCATGAAT+GGG + tig0021860:45716-45735 Msa1394540:intron 30.0%
AAAGCTCTATTTAAGAAGGT+GGG - tig0021860:45902-45921 None:intergenic 30.0%
TATAACCTGAATGATGTTAC+AGG + tig0021860:45925-45944 Msa1394540:intron 30.0%
ACAAGATGGAGATAATTTCA+TGG - tig0021860:45970-45989 None:intergenic 30.0%
AAGATGGCATAACATAATAC+AGG - tig0021860:46094-46113 None:intergenic 30.0%
!! ATATTGACAAGCTTTGGAAA+GGG - tig0021860:46221-46240 None:intergenic 30.0%
!! TATATTGACAAGCTTTGGAA+AGG - tig0021860:46222-46241 None:intergenic 30.0%
AACGATATATTGACAAGCTT+TGG - tig0021860:46227-46246 None:intergenic 30.0%
ACTAAATCAAATTACCCAAG+GGG - tig0021860:46769-46788 None:intergenic 30.0%
CTACTAAATCAAATTACCCA+AGG - tig0021860:46771-46790 None:intergenic 30.0%
! CTTGGGTAATTTGATTTAGT+AGG + tig0021860:46769-46788 Msa1394540:intron 30.0%
ACTAGAACAGTCATTATTAG+TGG + tig0021860:47669-47688 Msa1394540:intron 30.0%
CTAGAACAGTCATTATTAGT+GGG + tig0021860:47670-47689 Msa1394540:intron 30.0%
GTGTCAAACTTATATAGTCT+AGG + tig0021860:47708-47727 Msa1394540:intron 30.0%
ATTGTACCTATCGTACTATT+AGG + tig0021860:47820-47839 Msa1394540:intron 30.0%
TCGTGTATTGAAAAACAAGA+GGG - tig0021860:48022-48041 None:intergenic 30.0%
TTCGTGTATTGAAAAACAAG+AGG - tig0021860:48023-48042 None:intergenic 30.0%
! TTTCCACCAACATTTTCATT+TGG + tig0021860:48054-48073 Msa1394540:intron 30.0%
! TATAGAGGTATGGTATGTTA+TGG - tig0021860:48195-48214 None:intergenic 30.0%
CATGTCCTACAACTATTATT+GGG - tig0021860:48307-48326 None:intergenic 30.0%
AAGCCAAAGTAGTCTTTATA+AGG - tig0021860:48402-48421 None:intergenic 30.0%
! TTGAAACCTCTTTTTGTGAT+AGG + tig0021860:48565-48584 Msa1394540:intron 30.0%
AGAAAAAAGAGAGTCAAAAG+GGG + tig0021860:48601-48620 Msa1394540:intron 30.0%
TTATTTCGCTTGAATAGTCT+TGG + tig0021860:48704-48723 Msa1394540:intron 30.0%
ATTAGAACTGAAGAATACGA+AGG - tig0021860:48753-48772 None:intergenic 30.0%
CATTGTCTTGTAGTATTTCT+AGG - tig0021860:48793-48812 None:intergenic 30.0%
TCCATGGAGATATATACTAA+TGG + tig0021860:48944-48963 Msa1394540:intron 30.0%
ACCATTAGTATATATCTCCA+TGG - tig0021860:48948-48967 None:intergenic 30.0%
TGAAAAGTCAAATAGATGGT+GGG + tig0021860:49000-49019 Msa1394540:five_prime_UTR 30.0%
TCAAATATTACCTTTCGTCT+AGG - tig0021860:49139-49158 None:intergenic 30.0%
ATTTGATTGCTCGGTTAAAA+AGG + tig0021860:49327-49346 Msa1394540:intron 30.0%
!!! TTTGGTTTTGAAAAGAAGAC+TGG + tig0021860:49395-49414 Msa1394540:intron 30.0%
TTAATTGAGGAAGTGATATC+AGG + tig0021860:49535-49554 Msa1394540:intron 30.0%
! AAAGGAAAGGTTTTCTACTT+AGG + tig0021860:49636-49655 Msa1394540:intron 30.0%
TTTCTATGGTGTATTTGGTT+TGG + tig0021860:49849-49868 Msa1394540:intron 30.0%
TTGAATAAACCGGAAGTAAT+AGG - tig0021860:49964-49983 None:intergenic 30.0%
GTAAAGCTTCTTGAATAAAC+CGG - tig0021860:49974-49993 None:intergenic 30.0%
TATATCTTAATCCCAGAGAA+AGG - tig0021860:50097-50116 None:intergenic 30.0%
ATTTGAGGGAGAAAAAGTTT+GGG - tig0021860:50300-50319 None:intergenic 30.0%
TATTTGAGGGAGAAAAAGTT+TGG - tig0021860:50301-50320 None:intergenic 30.0%
ACGTTAGAGACAATATTTGA+GGG - tig0021860:50314-50333 None:intergenic 30.0%
TACGTTAGAGACAATATTTG+AGG - tig0021860:50315-50334 None:intergenic 30.0%
AAAGACCAAAAAAACCTGTT+CGG - tig0021860:50406-50425 None:intergenic 30.0%
TTTCTCATGGGAAAAGATAA+AGG + tig0021860:50475-50494 Msa1394540:intron 30.0%
AATAAGACTTCTTGGAAATC+AGG - tig0021860:50527-50546 None:intergenic 30.0%
!! TTGTGAAAACTTGCTTGTTT+TGG - tig0021860:50726-50745 None:intergenic 30.0%
TAAATCAAGGAATCGTAACA+CGG - tig0021860:50990-51009 None:intergenic 30.0%
GACTTCAAATAGCTCAATAA+TGG - tig0021860:51129-51148 None:intergenic 30.0%
! AAAGGAGTACATATTTAGAG+AGG - tig0021860:51192-51211 None:intergenic 30.0%
AAAAAGGAATACATCCTTAC+TGG + tig0021860:51249-51268 Msa1394540:intron 30.0%
! TCTTTTCTCAAGATCTCTTA+TGG - tig0021860:51309-51328 None:intergenic 30.0%
AGATCTTGAGAAAAGAGTAA+GGG + tig0021860:51313-51332 Msa1394540:five_prime_UTR 30.0%
GTCTTATCTCTATTCTATGT+GGG + tig0021860:51498-51517 Msa1394540:intron 30.0%
TCTTATCTCTATTCTATGTG+GGG + tig0021860:51499-51518 Msa1394540:intron 30.0%
CATATACTATACTAGAGTAG+TGG + tig0021860:51617-51636 Msa1394540:intron 30.0%
AAAAAAGTTGCTCCAGAAAA+AGG + tig0021860:51739-51758 Msa1394540:five_prime_UTR 30.0%
! AGATTTTGTGTATATTGGGT+GGG + tig0021860:51911-51930 Msa1394540:intron 30.0%
TCTTTGTGAAGATTACACAA+GGG - tig0021860:51965-51984 None:intergenic 30.0%
ATCTTTGTGAAGATTACACA+AGG - tig0021860:51966-51985 None:intergenic 30.0%
TGTAATCTTCACAAAGATGA+AGG + tig0021860:51968-51987 Msa1394540:five_prime_UTR 30.0%
TACTAACATCAATGATTAGC+TGG - tig0021860:52000-52019 None:intergenic 30.0%
ACTGTACATTCATATTAAGG+TGG - tig0021860:52066-52085 None:intergenic 30.0%
! CAATTTTGTGTTCACAGAAA+TGG + tig0021860:52402-52421 Msa1394540:intron 30.0%
! ACACAATCAAAACCTTGTTT+AGG - tig0021860:52445-52464 None:intergenic 30.0%
AACGAAATTATAGAAGAACC+AGG - tig0021860:52623-52642 None:intergenic 30.0%
! TTTTATCCTTTTCGATAGAC+TGG + tig0021860:52650-52669 Msa1394540:intron 30.0%
! AAATTTTTACGTTCCATGCA+AGG + tig0021860:52696-52715 Msa1394540:CDS 30.0%
! GTTCAATTTTTGCTTGTTCT+TGG - tig0021860:52907-52926 None:intergenic 30.0%
TCATCAATGTTTCTTAGGTA+CGG + tig0021860:52933-52952 Msa1394540:intron 30.0%
AGCATTCCTCTACAATAATT+TGG + tig0021860:53020-53039 Msa1394540:CDS 30.0%
AGATCTCCAAATTATTGTAG+AGG - tig0021860:53029-53048 None:intergenic 30.0%
!! TGGTTTGAAGCTTTTAAATG+TGG + tig0021860:53680-53699 Msa1394540:intron 30.0%
TGCATATAGATGTAATGGTT+GGG - tig0021860:53843-53862 None:intergenic 30.0%
TTTGCTGCATATAGATGTAA+TGG - tig0021860:53848-53867 None:intergenic 30.0%
!! ATTATGCTTTAACTTGAGTG+GGG + tig0021860:53905-53924 Msa1394540:intron 30.0%
! CTAGGAGATAATCTAAGATT+AGG - tig0021860:54001-54020 None:intergenic 30.0%
CTAATCTTAGATTATCTCCT+AGG + tig0021860:53999-54018 Msa1394540:intron 30.0%
ACTTATTTACATTTCCCTCT+TGG - tig0021860:54128-54147 None:intergenic 30.0%
! ACTTTTATCTCATAACGAGT+TGG + tig0021860:54203-54222 Msa1394540:intron 30.0%
TTAAGGATCATGCTAACTTA+AGG - tig0021860:54334-54353 None:intergenic 30.0%
GCATGATCCTTAAAATAATC+GGG + tig0021860:54341-54360 Msa1394540:intron 30.0%
CATGATCCTTAAAATAATCG+GGG + tig0021860:54342-54361 Msa1394540:intron 30.0%
TCATTTAAGAAACTTACAGC+TGG + tig0021860:54372-54391 Msa1394540:intron 30.0%
AATTGATTGCTAAGCTTTAC+AGG + tig0021860:54465-54484 Msa1394540:intron 30.0%
ATCTTTATACAACATAGCTC+GGG + tig0021860:54489-54508 Msa1394540:CDS 30.0%
CATTTAATCTACAAAAGGAG+TGG + tig0021860:54682-54701 Msa1394540:CDS 30.0%
TTTAATCTACAAAAGGAGTG+GGG + tig0021860:54684-54703 Msa1394540:CDS 30.0%
ACAAACTGCAAATTATCTTC+AGG + tig0021860:54769-54788 Msa1394540:three_prime_UTR 30.0%
CAAACTGCAAATTATCTTCA+GGG + tig0021860:54770-54789 Msa1394540:three_prime_UTR 30.0%
TAGTAGATGGTTTCTGTATA+TGG + tig0021860:54886-54905 Msa1394540:three_prime_UTR 30.0%
AATGGAAGTGATTAACCAGA+AGG + tig0021860:40748-40767 Msa1394540:five_prime_UTR 35.0%
TTCTGGTACAATTGAACACT+GGG - tig0021860:40989-41008 None:intergenic 35.0%
! TTTCTGGTACAATTGAACAC+TGG - tig0021860:40990-41009 None:intergenic 35.0%
! TGGATTTAGTGACTTTTTGG+CGG + tig0021860:41220-41239 Msa1394540:intron 35.0%
!! ACTTTAAGGCAGGAAAATCA+CGG - tig0021860:41345-41364 None:intergenic 35.0%
TGCCTTAAAGTTAGCAAATC+CGG + tig0021860:41354-41373 Msa1394540:intron 35.0%
!! ATCCGGATTTGCTAACTTTA+AGG - tig0021860:41359-41378 None:intergenic 35.0%
! TGAAGAGACTTCTTCTAAGA+AGG + tig0021860:41430-41449 Msa1394540:five_prime_UTR 35.0%
CAAGGGAAGATGATATTTCT+GGG + tig0021860:41453-41472 Msa1394540:five_prime_UTR 35.0%
! AAGGGAAGATGATATTTCTG+GGG + tig0021860:41454-41473 Msa1394540:five_prime_UTR 35.0%
! GGAATTAATGAATTTGGGAC+AGG + tig0021860:41499-41518 Msa1394540:five_prime_UTR 35.0%
!! TATCCAATCCTAGCTTTTTC+TGG + tig0021860:41744-41763 Msa1394540:intron 35.0%
! GTTTCTATCTTTTACATGCC+AGG + tig0021860:41770-41789 Msa1394540:intron 35.0%
!! CTGCTTTAGATGTAAGCTTT+TGG + tig0021860:41843-41862 Msa1394540:intron 35.0%
! CATGTTCATTTTCCCTTGAA+AGG + tig0021860:41879-41898 Msa1394540:intron 35.0%
TCTGTGGTCTAACAATCTAT+AGG + tig0021860:42140-42159 Msa1394540:intron 35.0%
CGTAGTCAATTTGATGAACT+TGG - tig0021860:42205-42224 None:intergenic 35.0%
TAGCAAGATCAAAAGTGGAT+TGG - tig0021860:42236-42255 None:intergenic 35.0%
TGTTGTAGCAAGATCAAAAG+TGG - tig0021860:42241-42260 None:intergenic 35.0%
!! CAAAAAGCATTTCAGTAGAC+AGG - tig0021860:42329-42348 None:intergenic 35.0%
AGGCTATATATATCTGACGT+GGG - tig0021860:42371-42390 None:intergenic 35.0%
ACATTCCTCATGTTACAAGA+TGG + tig0021860:42413-42432 Msa1394540:intron 35.0%
CAAAACCATCTTGTAACATG+AGG - tig0021860:42421-42440 None:intergenic 35.0%
!! TCACCTTTCAAGTTTCAAGT+TGG + tig0021860:42638-42657 Msa1394540:intron 35.0%
TTGGTTCAGCTTTCATTAAG+CGG + tig0021860:42715-42734 Msa1394540:intron 35.0%
!!! TGTTGTGTTGGCTTTTTTGT+AGG + tig0021860:42878-42897 Msa1394540:intron 35.0%
TGGGGATCATGAAAATGAAA+TGG + tig0021860:42986-43005 Msa1394540:five_prime_UTR 35.0%
GGGGATCATGAAAATGAAAT+GGG + tig0021860:42987-43006 Msa1394540:five_prime_UTR 35.0%
CTCCAAAAGATTCATCACTT+TGG + tig0021860:43036-43055 Msa1394540:five_prime_UTR 35.0%
! TCCCAAAGTGATGAATCTTT+TGG - tig0021860:43041-43060 None:intergenic 35.0%
! AAGATTCATCACTTTGGGAA+AGG + tig0021860:43042-43061 Msa1394540:five_prime_UTR 35.0%
GTGTGTACGGTGTATATTAA+TGG + tig0021860:43217-43236 Msa1394540:intron 35.0%
!!! ACATAGTGAAGGGGTATTTT+CGG - tig0021860:43274-43293 None:intergenic 35.0%
CGATGAAGTAAACATAGTGA+AGG - tig0021860:43285-43304 None:intergenic 35.0%
GTACTCAGTTGAATTCAAAG+AGG - tig0021860:43689-43708 None:intergenic 35.0%
!! GATAATTGTAGGGGGTATTT+GGG - tig0021860:43817-43836 None:intergenic 35.0%
TCGTGTATCTAGGAGAAATA+AGG - tig0021860:43966-43985 None:intergenic 35.0%
!! CCCAAGATATTAGTCTTAGA+AGG + tig0021860:44530-44549 Msa1394540:five_prime_UTR 35.0%
!! GCCTTCTAAGACTAATATCT+TGG - tig0021860:44534-44553 None:intergenic 35.0%
TGCATTATATAGCATCAGAG+AGG - tig0021860:44783-44802 None:intergenic 35.0%
!! TTGAGTTGGCATTATTGTAG+TGG + tig0021860:44851-44870 Msa1394540:intron 35.0%
! TGAGTTGGCATTATTGTAGT+GGG + tig0021860:44852-44871 Msa1394540:intron 35.0%
! AAACATCACCTTTTCCCAAA+TGG - tig0021860:44881-44900 None:intergenic 35.0%
!!! CTACTTTTTTGCTTAAGTCG+GGG + tig0021860:45129-45148 Msa1394540:intron 35.0%
!!! AAAACTGGTTTTTCTTCTGC+TGG + tig0021860:45231-45250 Msa1394540:intron 35.0%
! CACACTTTTGGTAGAACTAA+AGG - tig0021860:45357-45376 None:intergenic 35.0%
!! CTTTAGTTCTACCAAAAGTG+TGG + tig0021860:45355-45374 Msa1394540:intron 35.0%
TATCTGAAGAGTAAACCAGA+TGG + tig0021860:45412-45431 Msa1394540:five_prime_UTR 35.0%
TCTACTTGGTACCATATTGA+TGG + tig0021860:45456-45475 Msa1394540:five_prime_UTR 35.0%
CGCCTTAATTTCCATCAATA+TGG - tig0021860:45470-45489 None:intergenic 35.0%
GTTCATAGAACAATCTCAAG+TGG + tig0021860:45507-45526 Msa1394540:five_prime_UTR 35.0%
ATAGAACAATCTCAAGTGGT+TGG + tig0021860:45511-45530 Msa1394540:five_prime_UTR 35.0%
TAGAACAATCTCAAGTGGTT+GGG + tig0021860:45512-45531 Msa1394540:five_prime_UTR 35.0%
!! ATCATGAATGGGTATTGAGT+TGG + tig0021860:45727-45746 Msa1394540:intron 35.0%
!! TCATGAATGGGTATTGAGTT+GGG + tig0021860:45728-45747 Msa1394540:intron 35.0%
!! TTGGAAGTGCTATACTTCAT+GGG - tig0021860:45810-45829 None:intergenic 35.0%
!! TTTGGAAGTGCTATACTTCA+TGG - tig0021860:45811-45830 None:intergenic 35.0%
CAAAGCTCTATTTAAGAAGG+TGG - tig0021860:45903-45922 None:intergenic 35.0%
TGTTACCTGTAACATCATTC+AGG - tig0021860:45933-45952 None:intergenic 35.0%
ATGGCATAACATAATACAGG+AGG - tig0021860:46091-46110 None:intergenic 35.0%
!! TATTGACAAGCTTTGGAAAG+GGG - tig0021860:46220-46239 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - tig0021860:46674-46693 None:intergenic 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + tig0021860:46674-46693 Msa1394540:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG - tig0021860:46679-46698 None:intergenic 35.0%
AAGCCTCTTGTGTAAAAAAC+AGG - tig0021860:46680-46699 None:intergenic 35.0%
CTAAATCAAATTACCCAAGG+GGG - tig0021860:46768-46787 None:intergenic 35.0%
! ATTAATAGGTTGCAGGCTTT+TGG + tig0021860:47021-47040 Msa1394540:intron 35.0%
! TTAATAGGTTGCAGGCTTTT+GGG + tig0021860:47022-47041 Msa1394540:intron 35.0%
ACCATCAATCTTGCCAAAAT+TGG - tig0021860:47097-47116 None:intergenic 35.0%
CTCAATGTCACTACACATAA+AGG - tig0021860:47213-47232 None:intergenic 35.0%
! GTTAATTGATGGGGAGTATA+AGG + tig0021860:47252-47271 Msa1394540:intron 35.0%
AAAGGACAAACTGCTAAATG+GGG - tig0021860:47376-47395 None:intergenic 35.0%
GAAAGGACAAACTGCTAAAT+GGG - tig0021860:47377-47396 None:intergenic 35.0%
GGGAATAAGACATAAAGGAA+AGG - tig0021860:47394-47413 None:intergenic 35.0%
! TATCATTGTCGACAGTCTTT+TGG + tig0021860:47439-47458 Msa1394540:intron 35.0%
!!! CATACAAAGTTGGTTTTGTG+TGG + tig0021860:47552-47571 Msa1394540:intron 35.0%
AGTTATTGGACCATCCATTA+GGG + tig0021860:47624-47643 Msa1394540:intron 35.0%
GATTGACCTAATAGTACGAT+AGG - tig0021860:47829-47848 None:intergenic 35.0%
TTGAAAAACAAGAGGGGAAT+GGG - tig0021860:48015-48034 None:intergenic 35.0%
ATTGAAAAACAAGAGGGGAA+TGG - tig0021860:48016-48035 None:intergenic 35.0%
CGTGTATTGAAAAACAAGAG+GGG - tig0021860:48021-48040 None:intergenic 35.0%
! AACCCTTATATCGACTACTT+TGG + tig0021860:48169-48188 Msa1394540:intron 35.0%
TGAGCATAAGTATAGAGGTA+TGG - tig0021860:48205-48224 None:intergenic 35.0%
ATACCTCTATACTTATGCTC+AGG + tig0021860:48204-48223 Msa1394540:intron 35.0%
GATGACCCAATAATAGTTGT+AGG + tig0021860:48299-48318 Msa1394540:intron 35.0%
GCATGTCCTACAACTATTAT+TGG - tig0021860:48308-48327 None:intergenic 35.0%
! AGGCCTTATAAAGACTACTT+TGG + tig0021860:48396-48415 Msa1394540:intron 35.0%
ACGAAACTCAAAGATGTTGT+TGG - tig0021860:48455-48474 None:intergenic 35.0%
! TTCGTTACCAACCTTTTTCT+TGG + tig0021860:48470-48489 Msa1394540:intron 35.0%
! TCGTTACCAACCTTTTTCTT+GGG + tig0021860:48471-48490 Msa1394540:intron 35.0%
GAAAAAAGAGAGTCAAAAGG+GGG + tig0021860:48602-48621 Msa1394540:intron 35.0%
TTACAAGTACCAGAATCCTT+TGG - tig0021860:48893-48912 None:intergenic 35.0%
TTGTGATCAAAGTTCTTCCA+TGG + tig0021860:48928-48947 Msa1394540:intron 35.0%
GGAGATATATACTAATGGTG+AGG + tig0021860:48949-48968 Msa1394540:intron 35.0%
CTGAAAAGTCAAATAGATGG+TGG + tig0021860:48999-49018 Msa1394540:five_prime_UTR 35.0%
GTTGAACATAGATATACGAG+TGG + tig0021860:49222-49241 Msa1394540:intron 35.0%
! TAGTGAAAGTGTGAAACCTA+AGG + tig0021860:49464-49483 Msa1394540:intron 35.0%
GCATGATTATCATCAACCTT+AGG - tig0021860:49483-49502 None:intergenic 35.0%
! AGGAAGTGATATCAGGTTTT+TGG + tig0021860:49542-49561 Msa1394540:intron 35.0%
TGAGAATGTTATGTTATGGG+TGG + tig0021860:49579-49598 Msa1394540:intron 35.0%
ATGGAAGCTGTTGAAGTTTA+TGG - tig0021860:49753-49772 None:intergenic 35.0%
AAACTTCAACAGCTTCCATT+TGG + tig0021860:49754-49773 Msa1394540:intron 35.0%
! TTGTGATGGCATTGAGTTTA+TGG + tig0021860:49926-49945 Msa1394540:intron 35.0%
TTGAGTTTATGGTCTCTCTT+TGG + tig0021860:49937-49956 Msa1394540:intron 35.0%
! AATCCCAGAGAAAGGTTTTA+GGG - tig0021860:50089-50108 None:intergenic 35.0%
! TAATCCCAGAGAAAGGTTTT+AGG - tig0021860:50090-50109 None:intergenic 35.0%
!! ATTTTGGGAGCTTAAGCTTT+TGG + tig0021860:50171-50190 Msa1394540:intron 35.0%
CATGTTGCACAAGAATTTAG+GGG - tig0021860:50276-50295 None:intergenic 35.0%
GCATGTTGCACAAGAATTTA+GGG - tig0021860:50277-50296 None:intergenic 35.0%
TTTGAGGGAGAAAAAGTTTG+GGG - tig0021860:50299-50318 None:intergenic 35.0%
!! TTTTTCAGAAAGGCTTGTTC+TGG + tig0021860:50423-50442 Msa1394540:intron 35.0%
!! TTTTCAGAAAGGCTTGTTCT+GGG + tig0021860:50424-50443 Msa1394540:intron 35.0%
TGGGAAGCAAATATTTCTCA+TGG + tig0021860:50462-50481 Msa1394540:intron 35.0%
GGGAAGCAAATATTTCTCAT+GGG + tig0021860:50463-50482 Msa1394540:intron 35.0%
! TTTTCTCATAAACGAGGGAA+AGG + tig0021860:50546-50565 Msa1394540:intron 35.0%
! AGCAAGTTTTCACAAAACAG+AGG + tig0021860:50731-50750 Msa1394540:intron 35.0%
GAAGTCAAGATCGTAAATCA+AGG - tig0021860:51003-51022 None:intergenic 35.0%
TGATTTACGATCTTGACTTC+TGG + tig0021860:51003-51022 Msa1394540:intron 35.0%
AGTTGTATTTGCAACACTGA+AGG - tig0021860:51056-51075 None:intergenic 35.0%
GAGATCTTGAGAAAAGAGTA+AGG + tig0021860:51312-51331 Msa1394540:five_prime_UTR 35.0%
CGAAATACGCTATTTGTTTC+TGG - tig0021860:51350-51369 None:intergenic 35.0%
GAAACAAATAGCGTATTTCG+AGG + tig0021860:51350-51369 Msa1394540:five_prime_UTR 35.0%
AGATCAGATGATGAGGTTAT+GGG - tig0021860:51383-51402 None:intergenic 35.0%
! CATTTCCAATTGTACTGATC+TGG + tig0021860:51433-51452 Msa1394540:five_prime_UTR 35.0%
ACAAACCAGATCAGTACAAT+TGG - tig0021860:51441-51460 None:intergenic 35.0%
! TGTACTGATCTGGTTTGTAA+TGG + tig0021860:51443-51462 Msa1394540:five_prime_UTR 35.0%
! GTACTGATCTGGTTTGTAAT+GGG + tig0021860:51444-51463 Msa1394540:five_prime_UTR 35.0%
! GGTCTTATCTCTATTCTATG+TGG + tig0021860:51497-51516 Msa1394540:intron 35.0%
CACCCAATATACACAAAATC+TGG - tig0021860:51912-51931 None:intergenic 35.0%
! CAGATTTTGTGTATATTGGG+TGG + tig0021860:51910-51929 Msa1394540:intron 35.0%
!! ACTAATTTGTTGTTCTAGGG+TGG + tig0021860:52354-52373 Msa1394540:intron 35.0%
!! CTAATTTGTTGTTCTAGGGT+GGG + tig0021860:52355-52374 Msa1394540:intron 35.0%
! AAAACCTTGTTTAGGATCTG+TGG - tig0021860:52437-52456 None:intergenic 35.0%
TTTGTAGTAGGACAGAGTTA+TGG + tig0021860:52579-52598 Msa1394540:intron 35.0%
ATTTGTCATGCCTTGTATCT+CGG - tig0021860:52680-52699 None:intergenic 35.0%
! ATCGACAAATTTTCCTTGCA+TGG - tig0021860:52712-52731 None:intergenic 35.0%
! AGATTAACCAATGGATTCTC+AGG - tig0021860:52831-52850 None:intergenic 35.0%
! CCATTGGTTAATCTTTGTGT+CGG + tig0021860:52837-52856 Msa1394540:CDS 35.0%
TTTCTTCTTAAATGGGCACA+AGG - tig0021860:53084-53103 None:intergenic 35.0%
CTTGGTCATAGATGTAATGT+TGG + tig0021860:53364-53383 Msa1394540:intron 35.0%
AGAATGATCATCTTGGACAA+TGG - tig0021860:53423-53442 None:intergenic 35.0%
! ATTCTGACGATGACTTTTGT+TGG + tig0021860:53438-53457 Msa1394540:intron 35.0%
!! ACGATGACTTTTGTTGGTTA+TGG + tig0021860:53444-53463 Msa1394540:intron 35.0%
!! CGATGACTTTTGTTGGTTAT+GGG + tig0021860:53445-53464 Msa1394540:intron 35.0%
!! TTTTGTTGGTTATGGGCTTA+TGG + tig0021860:53452-53471 Msa1394540:intron 35.0%
TAAAACTGCTTCTGGTACAA+AGG - tig0021860:53655-53674 None:intergenic 35.0%
CTGCATATAGATGTAATGGT+TGG - tig0021860:53844-53863 None:intergenic 35.0%
!! TTATGCTTTAACTTGAGTGG+GGG + tig0021860:53906-53925 Msa1394540:intron 35.0%
GCAATATGGAAGATAATCCT+AGG - tig0021860:54019-54038 None:intergenic 35.0%
GTAAAAACTATCACCACTAG+CGG + tig0021860:54146-54165 Msa1394540:intron 35.0%
TGTTGACCAATCACTGTTAT+CGG + tig0021860:54243-54262 Msa1394540:intron 35.0%
!! AAGCTACCCCGATTATTTTA+AGG - tig0021860:54351-54370 None:intergenic 35.0%
GGCAGCAATATATTATGAGA+AGG + tig0021860:54540-54559 Msa1394540:CDS 35.0%
! ATGAGAAGGTGATTGCTATT+AGG + tig0021860:54554-54573 Msa1394540:CDS 35.0%
! TGAGAAGGTGATTGCTATTA+GGG + tig0021860:54555-54574 Msa1394540:CDS 35.0%
GTCATTGAAAATCACAAACC+TGG + tig0021860:54622-54641 Msa1394540:CDS 35.0%
AAAGATCATTGTTCCGTTTG+AGG + tig0021860:54733-54752 Msa1394540:CDS 35.0%
AGATGGTTTCTGTATATGGT+TGG + tig0021860:54890-54909 Msa1394540:three_prime_UTR 35.0%
! GAGGAAGATCAATTCAGGTT+CGG + tig0021860:40923-40942 Msa1394540:five_prime_UTR 40.0%
GATTAAGTTAGTTACCGGTG+AGG - tig0021860:41085-41104 None:intergenic 40.0%
!! CAGATGGTATGAGTGTTGAA+CGG + tig0021860:41150-41169 Msa1394540:intron 40.0%
ATCCAAGTCCATTAAGTCCA+TGG - tig0021860:41205-41224 None:intergenic 40.0%
!! GGATTTAGTGACTTTTTGGC+GGG + tig0021860:41221-41240 Msa1394540:intron 40.0%
!! ACTTTTTGGCGGGAAAGTTT+CGG + tig0021860:41231-41250 Msa1394540:intron 40.0%
!! GGATTTGCTAACTTTAAGGC+AGG - tig0021860:41355-41374 None:intergenic 40.0%
! AGACTTCTTCTAAGAAGGCA+AGG + tig0021860:41435-41454 Msa1394540:five_prime_UTR 40.0%
! GACTTCTTCTAAGAAGGCAA+GGG + tig0021860:41436-41455 Msa1394540:five_prime_UTR 40.0%
GCAAGGGAAGATGATATTTC+TGG + tig0021860:41452-41471 Msa1394540:five_prime_UTR 40.0%
!! GAAGATGATATTTCTGGGGT+AGG + tig0021860:41458-41477 Msa1394540:five_prime_UTR 40.0%
!! CAAGCTTTAGACTCTAGCAA+TGG + tig0021860:41645-41664 Msa1394540:intron 40.0%
TCTAGCAATGGAATGTGCAT+CGG + tig0021860:41657-41676 Msa1394540:intron 40.0%
! GCATCGGTGAATAATGCATT+TGG + tig0021860:41673-41692 Msa1394540:intron 40.0%
TCTCCAGAAAAAGCTAGGAT+TGG - tig0021860:41750-41769 None:intergenic 40.0%
GAAACTCTCCAGAAAAAGCT+AGG - tig0021860:41755-41774 None:intergenic 40.0%
!!! CTCTTTTTTTTGACCGCTTC+TGG - tig0021860:42016-42035 None:intergenic 40.0%
CAGAAGCGGTCAAAAAAAAG+AGG + tig0021860:42014-42033 Msa1394540:intron 40.0%
AGCGGTCAAAAAAAAGAGGT+AGG + tig0021860:42018-42037 Msa1394540:five_prime_UTR 40.0%
TGACACGGTACATTATTCTG+TGG + tig0021860:42124-42143 Msa1394540:intron 40.0%
! TAGCTATGTGTTGTTGTTGG+AGG - tig0021860:42295-42314 None:intergenic 40.0%
! CTGTAGCTATGTGTTGTTGT+TGG - tig0021860:42298-42317 None:intergenic 40.0%
CAACAACAACACATAGCTAC+AGG + tig0021860:42296-42315 Msa1394540:intron 40.0%
CAGGCTATATATATCTGACG+TGG - tig0021860:42372-42391 None:intergenic 40.0%
!!! TGGTTTTGTAGGGTTGAGTT+TGG + tig0021860:42433-42452 Msa1394540:intron 40.0%
CACTCCAAATGTCTTGTCTT+AGG + tig0021860:42532-42551 Msa1394540:intron 40.0%
TACGCCTAAGACAAGACATT+TGG - tig0021860:42539-42558 None:intergenic 40.0%
ATGTGTTGCATGAAGTTGTC+AGG + tig0021860:42907-42926 Msa1394540:five_prime_UTR 40.0%
TGATACGGGTCAGGTAAATT+TGG - tig0021860:42939-42958 None:intergenic 40.0%
TTTGTGTGGTCCATGTAAGA+TGG + tig0021860:43068-43087 Msa1394540:intron 40.0%
TCACTTGTCAGTGTTGTCAA+CGG + tig0021860:43383-43402 Msa1394540:intron 40.0%
! GCCATATTAACACGCCATTT+TGG + tig0021860:43423-43442 Msa1394540:intron 40.0%
GCCAAAATGGCGTGTTAATA+TGG - tig0021860:43427-43446 None:intergenic 40.0%
ATCCCATCACAAACTACCTA+TGG + tig0021860:43469-43488 Msa1394540:intron 40.0%
TCGTTAAAGATCTGCCATGA+TGG + tig0021860:43495-43514 Msa1394540:intron 40.0%
AACTATATCATCCCGCAAAG+TGG - tig0021860:43574-43593 None:intergenic 40.0%
CAAACAACCCCTCTCATATT+TGG + tig0021860:43629-43648 Msa1394540:intron 40.0%
! ATTTTCTCAGAGGAAAGCCT+CGG - tig0021860:43751-43770 None:intergenic 40.0%
! AGACGGAACTATTTTCTCAG+AGG - tig0021860:43761-43780 None:intergenic 40.0%
!! GGATAATTGTAGGGGGTATT+TGG - tig0021860:43818-43837 None:intergenic 40.0%
ATGTGCGTGGGATAATTGTA+GGG - tig0021860:43827-43846 None:intergenic 40.0%
AATGTGCGTGGGATAATTGT+AGG - tig0021860:43828-43847 None:intergenic 40.0%
GGAGTTACATAAATGTGCGT+GGG - tig0021860:43839-43858 None:intergenic 40.0%
AGGAGTTACATAAATGTGCG+TGG - tig0021860:43840-43859 None:intergenic 40.0%
ACTTACCCACATTCTGACTT+TGG + tig0021860:44020-44039 Msa1394540:intron 40.0%
TACAGAAAACAAGGTGATGC+TGG + tig0021860:44466-44485 Msa1394540:intron 40.0%
TGCACTAAAAGAAGCAGCTA+AGG + tig0021860:44642-44661 Msa1394540:five_prime_UTR 40.0%
TTGGGAAAAGGTGATGTTTG+AGG + tig0021860:44882-44901 Msa1394540:intron 40.0%
AACCAGAGAAAAAGTTGGAC+TGG + tig0021860:45058-45077 Msa1394540:intron 40.0%
!! AACCAGTCCAACTTTTTCTC+TGG - tig0021860:45063-45082 None:intergenic 40.0%
!! TGGACTGGTTCAAATACTTC+AGG + tig0021860:45073-45092 Msa1394540:intron 40.0%
!! GGACTGGTTCAAATACTTCA+GGG + tig0021860:45074-45093 Msa1394540:intron 40.0%
TAGTGACTCAAGCAATCATG+GGG - tig0021860:45112-45131 None:intergenic 40.0%
GTAGTGACTCAAGCAATCAT+GGG - tig0021860:45113-45132 None:intergenic 40.0%
AGTAGTGACTCAAGCAATCA+TGG - tig0021860:45114-45133 None:intergenic 40.0%
GATTTCACGACAAAAGTGGT+TGG - tig0021860:45158-45177 None:intergenic 40.0%
!! ACCACTTTTGTCGTGAAATC+AGG + tig0021860:45158-45177 Msa1394540:intron 40.0%
TCCTGATTTCACGACAAAAG+TGG - tig0021860:45162-45181 None:intergenic 40.0%
GTCCTGCCAGTATTTATCAT+TGG + tig0021860:45207-45226 Msa1394540:intron 40.0%
TGCCAATGATAAATACTGGC+AGG - tig0021860:45212-45231 None:intergenic 40.0%
ACACTTGCATTTACTCCATC+TGG - tig0021860:45430-45449 None:intergenic 40.0%
GCAAGTGTAGTTGATCTACT+TGG + tig0021860:45442-45461 Msa1394540:five_prime_UTR 40.0%
CCATGTTTCCAAGATGAACA+TGG - tig0021860:45579-45598 None:intergenic 40.0%
CCATGTTCATCTTGGAAACA+TGG + tig0021860:45576-45595 Msa1394540:five_prime_UTR 40.0%
CATCATGAATAACAAGCGGA+AGG - tig0021860:45782-45801 None:intergenic 40.0%
!! ATTGACAAGCTTTGGAAAGG+GGG - tig0021860:46219-46238 None:intergenic 40.0%
GTAAAAAATAAAGGGCAGCC+TGG + tig0021860:46582-46601 Msa1394540:intron 40.0%
CATGCAATACACCAATTGGT+GGG - tig0021860:46648-46667 None:intergenic 40.0%
!! TTACACAAGAGGCTTTTTCC+AGG + tig0021860:46685-46704 Msa1394540:intron 40.0%
!! AGGAGTAGTGGATTGGATTA+TGG - tig0021860:46861-46880 None:intergenic 40.0%
CATAGTGAATTAGGCTAGAG+AGG - tig0021860:46881-46900 None:intergenic 40.0%
AGAGATCTGCCAGGATTAAT+AGG + tig0021860:47007-47026 Msa1394540:intron 40.0%
! TGAGTGCTAGTTGCCAATTT+TGG + tig0021860:47081-47100 Msa1394540:intron 40.0%
!! GCCAATTTTGGCAAGATTGA+TGG + tig0021860:47093-47112 Msa1394540:intron 40.0%
AAGGACAAACTGCTAAATGG+GGG - tig0021860:47375-47394 None:intergenic 40.0%
GGAAAGGACAAACTGCTAAA+TGG - tig0021860:47378-47397 None:intergenic 40.0%
AGACTGTCGACAATGATATC+TGG - tig0021860:47437-47456 None:intergenic 40.0%
! ATTGTCGACAGTCTTTTGGA+GGG + tig0021860:47443-47462 Msa1394540:intron 40.0%
!! ACAGTCTTTTGGAGGGATAA+AGG + tig0021860:47450-47469 Msa1394540:intron 40.0%
!! CAGTCTTTTGGAGGGATAAA+GGG + tig0021860:47451-47470 Msa1394540:intron 40.0%
GCAAGCTTCACATACAAAGT+TGG + tig0021860:47542-47561 Msa1394540:intron 40.0%
! CTAATGGATGGTCCAATAAC+TGG - tig0021860:47625-47644 None:intergenic 40.0%
CAGTTATTGGACCATCCATT+AGG + tig0021860:47623-47642 Msa1394540:intron 40.0%
GTTATTGGACCATCCATTAG+GGG + tig0021860:47625-47644 Msa1394540:intron 40.0%
GAACAGTCATTATTAGTGGG+AGG + tig0021860:47673-47692 Msa1394540:intron 40.0%
ATAAGTTTGACACCCGATGA+GGG - tig0021860:47701-47720 None:intergenic 40.0%
TATAAGTTTGACACCCGATG+AGG - tig0021860:47702-47721 None:intergenic 40.0%
TGCTAGATGTTATCGATCCT+TGG + tig0021860:47899-47918 Msa1394540:five_prime_UTR 40.0%
GTTATCGATCCTTGGAAGAA+AGG + tig0021860:47907-47926 Msa1394540:five_prime_UTR 40.0%
TGCTTGTTTCCTTTCTTCCA+AGG - tig0021860:47919-47938 None:intergenic 40.0%
TCAGCGCCAAATGAAAATGT+TGG - tig0021860:48063-48082 None:intergenic 40.0%
GGCCAAAGTAGTCGATATAA+GGG - tig0021860:48174-48193 None:intergenic 40.0%
TGGCCAAAGTAGTCGATATA+AGG - tig0021860:48175-48194 None:intergenic 40.0%
GATCCTGAGCATAAGTATAG+AGG - tig0021860:48210-48229 None:intergenic 40.0%
ATGGCTAATAGTAGGCATGA+GGG - tig0021860:48254-48273 None:intergenic 40.0%
TATGGCTAATAGTAGGCATG+AGG - tig0021860:48255-48274 None:intergenic 40.0%
CATGCCTACTATTAGCCATA+TGG + tig0021860:48255-48274 Msa1394540:intron 40.0%
! AATCACAGAGCTAGCTTAAG+AGG + tig0021860:48361-48380 Msa1394540:intron 40.0%
! CGTTACCAACCTTTTTCTTG+GGG + tig0021860:48472-48491 Msa1394540:intron 40.0%
! GTTACCAACCTTTTTCTTGG+GGG + tig0021860:48473-48492 Msa1394540:intron 40.0%
AGAAAACTCCCCCAAGAAAA+AGG - tig0021860:48484-48503 None:intergenic 40.0%
TGTGAATGTAAGTCTCCCTT+TGG + tig0021860:49087-49106 Msa1394540:five_prime_UTR 40.0%
TCAGAGATTCGTGTACCAAA+GGG - tig0021860:49105-49124 None:intergenic 40.0%
TTCAGAGATTCGTGTACCAA+AGG - tig0021860:49106-49125 None:intergenic 40.0%
GAATGTGCTTGTATGAAAGC+AGG - tig0021860:49191-49210 None:intergenic 40.0%
TAAGGAGCTAGAGAACCAAA+TGG - tig0021860:49772-49791 None:intergenic 40.0%
CTTATCAGTCATGAAGTGAC+TGG + tig0021860:49809-49828 Msa1394540:intron 40.0%
!! TGCACTTGCACTTTTTGTGA+TGG + tig0021860:49912-49931 Msa1394540:intron 40.0%
CTCTTTGGTCCTATTACTTC+CGG + tig0021860:49952-49971 Msa1394540:intron 40.0%
TTAGAGACGTGAACACTCTA+AGG - tig0021860:50011-50030 None:intergenic 40.0%
CAAAGAGCTTTCATTTGAGG+TGG - tig0021860:50038-50057 None:intergenic 40.0%
GCTCAAAGAGCTTTCATTTG+AGG - tig0021860:50041-50060 None:intergenic 40.0%
CTTCCCTAAAACCTTTCTCT+GGG + tig0021860:50083-50102 Msa1394540:intron 40.0%
AAGACTTCGATAATGTGTGC+AGG + tig0021860:50140-50159 Msa1394540:intron 40.0%
CTTAAGCTCCCAAAATGTGT+TGG - tig0021860:50167-50186 None:intergenic 40.0%
GGCATGTTGCACAAGAATTT+AGG - tig0021860:50278-50297 None:intergenic 40.0%
ACCAAAAAAACCTGTTCGGA+CGG - tig0021860:50402-50421 None:intergenic 40.0%
! TTTCAGAAAGGCTTGTTCTG+GGG + tig0021860:50425-50444 Msa1394540:intron 40.0%
TTGCATAACCAATTCCCTTG+GGG - tig0021860:50703-50722 None:intergenic 40.0%
GTTGCATAACCAATTCCCTT+GGG - tig0021860:50704-50723 None:intergenic 40.0%
ATAGCGTATTTCGAGGATTC+AGG + tig0021860:51357-51376 Msa1394540:five_prime_UTR 40.0%
CAGATCAGATGATGAGGTTA+TGG - tig0021860:51384-51403 None:intergenic 40.0%
! TGATCTGGTTTGTAATGGGA+GGG + tig0021860:51448-51467 Msa1394540:five_prime_UTR 40.0%
CTTTGTGAGCAAATGAAGTG+AGG - tig0021860:51664-51683 None:intergenic 40.0%
AATTAGGTCGAAAGCTTCCA+GGG + tig0021860:51715-51734 Msa1394540:intron 40.0%
! CCTTCTCAATTGCCTTTTTC+TGG - tig0021860:51754-51773 None:intergenic 40.0%
CCAGAAAAAGGCAATTGAGA+AGG + tig0021860:51751-51770 Msa1394540:five_prime_UTR 40.0%
AACACCAAACAGATTACCTG+AGG - tig0021860:51842-51861 None:intergenic 40.0%
GCGCACATTAAAAAGGAAAG+GGG - tig0021860:52044-52063 None:intergenic 40.0%
GGCGCACATTAAAAAGGAAA+GGG - tig0021860:52045-52064 None:intergenic 40.0%
TGGCGCACATTAAAAAGGAA+AGG - tig0021860:52046-52065 None:intergenic 40.0%
TAAGGTGGCGCACATTAAAA+AGG - tig0021860:52051-52070 None:intergenic 40.0%
ATGCATTAGCATCCTTGCAA+AGG + tig0021860:52092-52111 Msa1394540:five_prime_UTR 40.0%
CTCATTCTTCTCAGTAGACA+GGG - tig0021860:52170-52189 None:intergenic 40.0%
TCTCATTCTTCTCAGTAGAC+AGG - tig0021860:52171-52190 None:intergenic 40.0%
AACACCACAGATCCTAAACA+AGG + tig0021860:52430-52449 Msa1394540:CDS 40.0%
AGCTTGGAATTGCTACTACA+AGG + tig0021860:52501-52520 Msa1394540:CDS 40.0%
GTCGTATCGAGGTAAATTTG+TGG + tig0021860:52523-52542 Msa1394540:intron 40.0%
!! CCAGGTTCTACTTTTACTTC+AGG - tig0021860:52605-52624 None:intergenic 40.0%
CCTGAAGTAAAAGTAGAACC+TGG + tig0021860:52602-52621 Msa1394540:intron 40.0%
! GGTTTTCCAGTCTATCGAAA+AGG - tig0021860:52659-52678 None:intergenic 40.0%
TAAACTGATGCGCAGAAATG+AGG - tig0021860:52749-52768 None:intergenic 40.0%
ATGTAGCCATCATCAAGATG+CGG + tig0021860:52773-52792 Msa1394540:CDS 40.0%
CCGACACAAAGATTAACCAA+TGG - tig0021860:52840-52859 None:intergenic 40.0%
AAGCATCAGTGTGTTGTACA+AGG + tig0021860:52994-53013 Msa1394540:CDS 40.0%
TTCCCCACTTATTCACCATA+TGG + tig0021860:53210-53229 Msa1394540:intron 40.0%
TCCCCACTTATTCACCATAT+GGG + tig0021860:53211-53230 Msa1394540:intron 40.0%
ACCCCATATGGTGAATAAGT+GGG - tig0021860:53216-53235 None:intergenic 40.0%
TGTTTGGTCAAGTAACCTAG+TGG - tig0021860:53249-53268 None:intergenic 40.0%
CATCGTCAGAATGATCATCT+TGG - tig0021860:53430-53449 None:intergenic 40.0%
CTCTAGCCAAACTCTCTATT+CGG + tig0021860:53479-53498 Msa1394540:intron 40.0%
TCTAGCCAAACTCTCTATTC+GGG + tig0021860:53480-53499 Msa1394540:intron 40.0%
ATTAGTGGTGCACTGGAAAA+AGG - tig0021860:53527-53546 None:intergenic 40.0%
CCAACTCTTAAAACTGCTTC+TGG - tig0021860:53663-53682 None:intergenic 40.0%
!!! CCAGAAGCAGTTTTAAGAGT+TGG + tig0021860:53660-53679 Msa1394540:intron 40.0%
CTTGCCATGAAATTTCTCTC+AGG + tig0021860:53735-53754 Msa1394540:intron 40.0%
TCTGCCTGAGAGAAATTTCA+TGG - tig0021860:53742-53761 None:intergenic 40.0%
ATGGTTGGGAAGACAACTTA+GGG - tig0021860:53829-53848 None:intergenic 40.0%
AATGGTTGGGAAGACAACTT+AGG - tig0021860:53830-53849 None:intergenic 40.0%
GTGAAAGGCGAATCTTTATC+AGG - tig0021860:54088-54107 None:intergenic 40.0%
TACATTTCCCTCTTGGAATC+CGG - tig0021860:54121-54140 None:intergenic 40.0%
! TATCGGTGTCTCAGATTTGA+TGG + tig0021860:54260-54279 Msa1394540:intron 40.0%
GTGTTACAAGACCAACATGA+TGG - tig0021860:54519-54538 None:intergenic 40.0%
!! TCATGTTGGTCTTGTAACAC+TGG + tig0021860:54519-54538 Msa1394540:CDS 40.0%
TGGTTTCTGTATATGGTTGG+TGG + tig0021860:54893-54912 Msa1394540:three_prime_UTR 40.0%
GTCTTTGAATCATTGCTGCT+GGG - tig0021860:54949-54968 None:intergenic 40.0%
TGTCTTTGAATCATTGCTGC+TGG - tig0021860:54950-54969 None:intergenic 40.0%
! CAAAGACATGCTGAAGTGTT+TGG + tig0021860:54962-54981 Msa1394540:three_prime_UTR 40.0%
GGAAGTGATTAACCAGAAGG+AGG + tig0021860:40751-40770 Msa1394540:five_prime_UTR 45.0%
GATGATCTTCATCCTCCTTC+TGG - tig0021860:40766-40785 None:intergenic 45.0%
AGGAGGATGAAGATCATCCA+AGG + tig0021860:40768-40787 Msa1394540:five_prime_UTR 45.0%
GGAGGATGAAGATCATCCAA+GGG + tig0021860:40769-40788 Msa1394540:five_prime_UTR 45.0%
GAATGAAGAGGAAGAGGAAG+AGG + tig0021860:40880-40899 Msa1394540:five_prime_UTR 45.0%
GGAAGGAGAAAACGATACAG+TGG + tig0021860:40901-40920 Msa1394540:five_prime_UTR 45.0%
AGGAGAAAACGATACAGTGG+AGG + tig0021860:40904-40923 Msa1394540:five_prime_UTR 45.0%
CAGTGGAGGAAGATCAATTC+AGG + tig0021860:40918-40937 Msa1394540:five_prime_UTR 45.0%
! GATCAATTCAGGTTCGGCAA+CGG + tig0021860:40929-40948 Msa1394540:five_prime_UTR 45.0%
CTGTTACGTACGAAGTCCAA+CGG - tig0021860:40962-40981 None:intergenic 45.0%
GGTGGTAGTCTTCCAATTTC+TGG - tig0021860:41006-41025 None:intergenic 45.0%
AGACTACCACCAGAAATCGA+TGG + tig0021860:41015-41034 Msa1394540:five_prime_UTR 45.0%
!! TGGTATGAGTGTTGAACGGA+AGG + tig0021860:41154-41173 Msa1394540:intron 45.0%
!! GTTTTGCTACTTGCATGCCA+TGG + tig0021860:41185-41204 Msa1394540:intron 45.0%
CTTGCATGCCATGGACTTAA+TGG + tig0021860:41194-41213 Msa1394540:intron 45.0%
!! TGCCATGGACTTAATGGACT+TGG + tig0021860:41200-41219 Msa1394540:intron 45.0%
ATTCCTCCTCTACATCAGCT+AGG - tig0021860:41484-41503 None:intergenic 45.0%
ACAGGGCAAGAGGTCAAAAA+AGG + tig0021860:41517-41536 Msa1394540:five_prime_UTR 45.0%
TTACATGCCAGGTGACTTTG+CGG + tig0021860:41781-41800 Msa1394540:intron 45.0%
AAAAATGCCGCAAAGTCACC+TGG - tig0021860:41791-41810 None:intergenic 45.0%
ACGTTTACCTTTCTGACGAG+AGG + tig0021860:42263-42282 Msa1394540:intron 45.0%
GAAACTTCCTCTCGTCAGAA+AGG - tig0021860:42273-42292 None:intergenic 45.0%
!! TGGTCTAGTAATGGATGTCC+CGG - tig0021860:42502-42521 None:intergenic 45.0%
GACTTGAGGTGGTCTAGTAA+TGG - tig0021860:42511-42530 None:intergenic 45.0%
! ATTTGGAGTGTGACTTGAGG+TGG - tig0021860:42522-42541 None:intergenic 45.0%
! GACATTTGGAGTGTGACTTG+AGG - tig0021860:42525-42544 None:intergenic 45.0%
ACAGCTCCAAGGATGTGATA+CGG - tig0021860:42954-42973 None:intergenic 45.0%
TTTGGGAAAGGCTCTTTGTG+TGG + tig0021860:43054-43073 Msa1394540:five_prime_UTR 45.0%
TCAGTGTTGTCAACGGAGAA+AGG + tig0021860:43390-43409 Msa1394540:intron 45.0%
! CGCCATAGGTAGTTTGTGAT+GGG - tig0021860:43474-43493 None:intergenic 45.0%
CCATCACAAACTACCTATGG+CGG + tig0021860:43472-43491 Msa1394540:intron 45.0%
AGATCTTTAACGACCGCCAT+AGG - tig0021860:43488-43507 None:intergenic 45.0%
TGTTGGTCATGGAACCATCA+TGG - tig0021860:43512-43531 None:intergenic 45.0%
CAACCTGCCAAATATGAGAG+GGG - tig0021860:43639-43658 None:intergenic 45.0%
CCAACCTGCCAAATATGAGA+GGG - tig0021860:43640-43659 None:intergenic 45.0%
TCCAACCTGCCAAATATGAG+AGG - tig0021860:43641-43660 None:intergenic 45.0%
! GGCAGGTTGGATCAATGATA+AGG + tig0021860:43650-43669 Msa1394540:intron 45.0%
TGTGCGTGGGATAATTGTAG+GGG - tig0021860:43826-43845 None:intergenic 45.0%
GTTGGCCAAAGTCAGAATGT+GGG - tig0021860:44028-44047 None:intergenic 45.0%
TGTTGGCCAAAGTCAGAATG+TGG - tig0021860:44029-44048 None:intergenic 45.0%
AATAATGCCAACTCAACCCC+TGG - tig0021860:44847-44866 None:intergenic 45.0%
! GTTGGCATTATTGTAGTGGG+TGG + tig0021860:44855-44874 Msa1394540:intron 45.0%
!! TATTGTAGTGGGTGGCCATT+TGG + tig0021860:44863-44882 Msa1394540:intron 45.0%
!! ATTGTAGTGGGTGGCCATTT+GGG + tig0021860:44864-44883 Msa1394540:intron 45.0%
!!! CTTTTTTGCTTAAGTCGGGG+AGG + tig0021860:45132-45151 Msa1394540:intron 45.0%
! GCTCAACTTGACCACACTTT+TGG - tig0021860:45369-45388 None:intergenic 45.0%
GGAATCTGCCATGTTCATCT+TGG + tig0021860:45568-45587 Msa1394540:five_prime_UTR 45.0%
TGGAAACATGGAAATCGCTC+AGG + tig0021860:45588-45607 Msa1394540:five_prime_UTR 45.0%
!! TTGACAAGCTTTGGAAAGGG+GGG - tig0021860:46218-46237 None:intergenic 45.0%
GCATGCAATACACCAATTGG+TGG - tig0021860:46649-46668 None:intergenic 45.0%
GCTGCATGCAATACACCAAT+TGG - tig0021860:46652-46671 None:intergenic 45.0%
ATTAGGCTAGAGAGGAGTAG+TGG - tig0021860:46873-46892 None:intergenic 45.0%
TTAATCCTGGCAGATCTCTC+TGG - tig0021860:47006-47025 None:intergenic 45.0%
TGCCAGGATTAATAGGTTGC+AGG + tig0021860:47014-47033 Msa1394540:intron 45.0%
AGCCTGCAACCTATTAATCC+TGG - tig0021860:47019-47038 None:intergenic 45.0%
! CATTGTCGACAGTCTTTTGG+AGG + tig0021860:47442-47461 Msa1394540:intron 45.0%
! AGGGATAAAGGGTACGTTAG+AGG + tig0021860:47462-47481 Msa1394540:intron 45.0%
TTTGTTGGGCCACCAGTTAT+TGG + tig0021860:47610-47629 Msa1394540:intron 45.0%
ATGGATGGTCCAATAACTGG+TGG - tig0021860:47622-47641 None:intergenic 45.0%
GCGCCAAATGAAAATGTTGG+TGG - tig0021860:48060-48079 None:intergenic 45.0%
!!! CAAGCTTTTGAGGTAGAGCT+AGG - tig0021860:48128-48147 None:intergenic 45.0%
! ACCTCAAAAGCTTGCTCTAG+AGG + tig0021860:48134-48153 Msa1394540:intron 45.0%
TGGCTAATAGTAGGCATGAG+GGG - tig0021860:48253-48272 None:intergenic 45.0%
CGCTCCATATGGCTAATAGT+AGG - tig0021860:48262-48281 None:intergenic 45.0%
! CGTATTTTCTGCGCTCCATA+TGG - tig0021860:48273-48292 None:intergenic 45.0%
CTGTTTGTAACCACAACGAC+TGG - tig0021860:48430-48449 None:intergenic 45.0%
AACTCCCCCAAGAAAAAGGT+TGG - tig0021860:48480-48499 None:intergenic 45.0%
! GGGGAGTTTTCTCGAGAATT+CGG + tig0021860:48492-48511 Msa1394540:intron 45.0%
! GTTGCACACTCTTTTGACAC+AGG + tig0021860:48634-48653 Msa1394540:intron 45.0%
TGTTGAAGCACGCATAGCTT+TGG + tig0021860:48811-48830 Msa1394540:five_prime_UTR 45.0%
! TTTGGCTTCCCTTCTAGTTG+AGG + tig0021860:48829-48848 Msa1394540:five_prime_UTR 45.0%
TTTCCCCTCCTCAACTAGAA+GGG - tig0021860:48840-48859 None:intergenic 45.0%
TGGAGGAGACAACAAGGAAA+TGG - tig0021860:48873-48892 None:intergenic 45.0%
! TTCCTTGTTGTCTCCTCCAA+AGG + tig0021860:48874-48893 Msa1394540:five_prime_UTR 45.0%
! ATCCTTTGGAGGAGACAACA+AGG - tig0021860:48879-48898 None:intergenic 45.0%
TTGTCTCCTCCAAAGGATTC+TGG + tig0021860:48881-48900 Msa1394540:five_prime_UTR 45.0%
CAAGTACCAGAATCCTTTGG+AGG - tig0021860:48890-48909 None:intergenic 45.0%
ATTACCTTTCGTCTAGGAGC+TGG - tig0021860:49133-49152 None:intergenic 45.0%
AACTGAGCATGCATGTACAC+AGG - tig0021860:49257-49276 None:intergenic 45.0%
CTCGGTTAAAAAGGTTCAGC+TGG + tig0021860:49336-49355 Msa1394540:intron 45.0%
! ATCTTAGCTCGTGGTCTTGA+GGG + tig0021860:49664-49683 Msa1394540:intron 45.0%
TTCAAGAAGCTTTACCTGCC+CGG + tig0021860:49979-49998 Msa1394540:intron 45.0%
AGCTCTTTGAGCTTGAAGCA+AGG + tig0021860:50049-50068 Msa1394540:intron 45.0%
GCTTCCCTAAAACCTTTCTC+TGG + tig0021860:50082-50101 Msa1394540:intron 45.0%
! TGTGCAGGACCAACACATTT+TGG + tig0021860:50155-50174 Msa1394540:intron 45.0%
! GTGCAGGACCAACACATTTT+GGG + tig0021860:50156-50175 Msa1394540:intron 45.0%
!!! ACCGTCCGAACAGGTTTTTT+TGG + tig0021860:50398-50417 Msa1394540:intron 45.0%
TTGCTTCCCACTCACTTGTT+TGG - tig0021860:50452-50471 None:intergenic 45.0%
!! AATGCTAAAGAGTGCCCCAA+GGG + tig0021860:50686-50705 Msa1394540:intron 45.0%
GGTTGCATAACCAATTCCCT+TGG - tig0021860:50705-50724 None:intergenic 45.0%
! CGATCTTGACTTCTGGTCTT+TGG + tig0021860:51010-51029 Msa1394540:intron 45.0%
! CTTGACTTCTGGTCTTTGGT+CGG + tig0021860:51014-51033 Msa1394540:intron 45.0%
! TGGAGAGACGCCTTTTTGAT+TGG - tig0021860:51289-51308 None:intergenic 45.0%
CACTCACAGATCAGATGATG+AGG - tig0021860:51390-51409 None:intergenic 45.0%
! CTGATCTGGTTTGTAATGGG+AGG + tig0021860:51447-51466 Msa1394540:five_prime_UTR 45.0%
! GATCTGGTTTGTAATGGGAG+GGG + tig0021860:51449-51468 Msa1394540:five_prime_UTR 45.0%
CAATTAGGTCGAAAGCTTCC+AGG + tig0021860:51714-51733 Msa1394540:intron 45.0%
ACTTAGCCAGTCAATTCCAG+AGG - tig0021860:51801-51820 None:intergenic 45.0%
TGAGCCTCAGGTAATCTGTT+TGG + tig0021860:51835-51854 Msa1394540:intron 45.0%
ATATTGGGTGGGATGTTTCC+AGG + tig0021860:51922-51941 Msa1394540:intron 45.0%
GAGAATCTGTGTTAGGTTCC+TGG - tig0021860:51943-51962 None:intergenic 45.0%
CACAAGGGAGAATCTGTGTT+AGG - tig0021860:51950-51969 None:intergenic 45.0%
TGCTTCGCTATACCTTTGCA+AGG - tig0021860:52107-52126 None:intergenic 45.0%
! GCAAAGGTATAGCGAAGCAT+TGG + tig0021860:52108-52127 Msa1394540:five_prime_UTR 45.0%
ATGCACATAGTGTTGCAGCT+TGG + tig0021860:52485-52504 Msa1394540:CDS 45.0%
GTGGATGCAAGACGTTAGTT+TGG + tig0021860:52542-52561 Msa1394540:intron 45.0%
GACTGGAAAACCGAGATACA+AGG + tig0021860:52667-52686 Msa1394540:intron 45.0%
TGATGCGCAGAAATGAGGAT+AGG - tig0021860:52744-52763 None:intergenic 45.0%
ACTTCTGCCTGAGAATCCAT+TGG + tig0021860:52821-52840 Msa1394540:CDS 45.0%
ATGTTTCTTAGGTACGGCCT+TGG + tig0021860:52939-52958 Msa1394540:intron 45.0%
TGGTGAATAAGTGGGGAATC+CGG - tig0021860:53208-53227 None:intergenic 45.0%
CCCCATATGGTGAATAAGTG+GGG - tig0021860:53215-53234 None:intergenic 45.0%
CCCCACTTATTCACCATATG+GGG + tig0021860:53212-53231 Msa1394540:intron 45.0%
CACCCCATATGGTGAATAAG+TGG - tig0021860:53217-53236 None:intergenic 45.0%
GGCTAGAAATTCACCCCATA+TGG - tig0021860:53228-53247 None:intergenic 45.0%
ACCAAGATGAGCAGTGCATT+GGG - tig0021860:53350-53369 None:intergenic 45.0%
! TGCATTTGGGATGAAGGATG+AGG - tig0021860:53390-53409 None:intergenic 45.0%
! AGCTAGTGCATTTGGGATGA+AGG - tig0021860:53396-53415 None:intergenic 45.0%
TGGCTCAAGCTAGTGCATTT+GGG - tig0021860:53403-53422 None:intergenic 45.0%
ATGGCTCAAGCTAGTGCATT+TGG - tig0021860:53404-53423 None:intergenic 45.0%
AGCATCCCGAATAGAGAGTT+TGG - tig0021860:53488-53507 None:intergenic 45.0%
ACTCTCTATTCGGGATGCTT+TGG + tig0021860:53489-53508 Msa1394540:intron 45.0%
! TTTGGGATGAAGGATGAAGC+CGG - tig0021860:53566-53585 None:intergenic 45.0%
! AGCTAGTGTGTTTGGGATGA+AGG - tig0021860:53576-53595 None:intergenic 45.0%
AAGGCTGAGCTAGTGTGTTT+GGG - tig0021860:53583-53602 None:intergenic 45.0%
AAAGGCTGAGCTAGTGTGTT+TGG - tig0021860:53584-53603 None:intergenic 45.0%
GGCAGATCATGCTATCAATC+TGG + tig0021860:53756-53775 Msa1394540:intron 45.0%
AGATTCGCCTTTCACCCAAA+AGG + tig0021860:54093-54112 Msa1394540:intron 45.0%
! CTTGGAATCCGGATCCTTTT+GGG - tig0021860:54110-54129 None:intergenic 45.0%
! TCTTGGAATCCGGATCCTTT+TGG - tig0021860:54111-54130 None:intergenic 45.0%
AAAAGGATCCGGATTCCAAG+AGG + tig0021860:54110-54129 Msa1394540:intron 45.0%
AAAGGATCCGGATTCCAAGA+GGG + tig0021860:54111-54130 Msa1394540:intron 45.0%
GAGACACCGATAACAGTGAT+TGG - tig0021860:54252-54271 None:intergenic 45.0%
!! TTATTAATTACAATTATAAT+TGG + tig0021860:44154-44173 Msa1394540:intron 5.0%
!!! TAAACATATTTTAATATTTA+TGG + tig0021860:50950-50969 Msa1394540:intron 5.0%
TCGTTGTCTTCTATCGCCCT+TGG - tig0021860:40788-40807 None:intergenic 50.0%
ACCGAAGACGACGCATTGTA+CGG + tig0021860:40821-40840 Msa1394540:five_prime_UTR 50.0%
ACCGTACAATGCGTCGTCTT+CGG - tig0021860:40825-40844 None:intergenic 50.0%
TTGTACGGTGCGGAAGAGAA+CGG + tig0021860:40836-40855 Msa1394540:five_prime_UTR 50.0%
GTCGGAGAATGAAGAGGAAG+AGG + tig0021860:40874-40893 Msa1394540:five_prime_UTR 50.0%
GAAGAGGAAGAGGAAGAGGA+AGG + tig0021860:40884-40903 Msa1394540:five_prime_UTR 50.0%
!! GGTACTCCATCGATTTCTGG+TGG - tig0021860:41024-41043 None:intergenic 50.0%
!! CTCGGTACTCCATCGATTTC+TGG - tig0021860:41027-41046 None:intergenic 50.0%
GCTTTCTGTTGTCGAGAGCT+CGG - tig0021860:41045-41064 None:intergenic 50.0%
AGTTACCGGTGAGGTTGTTG+CGG - tig0021860:41076-41095 None:intergenic 50.0%
! TGAATTTGGGACAGGGCAAG+AGG + tig0021860:41507-41526 Msa1394540:five_prime_UTR 50.0%
GCGACTCGTATAGTGCATGA+GGG - tig0021860:42099-42118 None:intergenic 50.0%
TACGAGTCGCCGTTATGACA+CGG + tig0021860:42109-42128 Msa1394540:five_prime_UTR 50.0%
TAGTGCCCATCCAAATCCAC+CGG + tig0021860:42480-42499 Msa1394540:intron 50.0%
! ATGTCCCGGTGGATTTGGAT+GGG - tig0021860:42488-42507 None:intergenic 50.0%
! AATGGATGTCCCGGTGGATT+TGG - tig0021860:42493-42512 None:intergenic 50.0%
!! TCTAGTAATGGATGTCCCGG+TGG - tig0021860:42499-42518 None:intergenic 50.0%
AAGCGTGTTGAGAGTCTCAC+AGG + tig0021860:42563-42582 Msa1394540:intron 50.0%
CAGGCACTTCAGATGTGATC+TGG + tig0021860:42582-42601 Msa1394540:intron 50.0%
GTTGCATGAAGTTGTCAGGC+TGG + tig0021860:42911-42930 Msa1394540:five_prime_UTR 50.0%
CAGCTCCAAGGATGTGATAC+GGG - tig0021860:42953-42972 None:intergenic 50.0%
GAGCTGTCCATGGTGCAATT+GGG + tig0021860:42967-42986 Msa1394540:five_prime_UTR 50.0%
AGCTGTCCATGGTGCAATTG+GGG + tig0021860:42968-42987 Msa1394540:five_prime_UTR 50.0%
CATGATCCCCAATTGCACCA+TGG - tig0021860:42977-42996 None:intergenic 50.0%
!! TAACACGCCATTTTGGCCTG+CGG + tig0021860:43430-43449 Msa1394540:intron 50.0%
! CCGCCATAGGTAGTTTGTGA+TGG - tig0021860:43475-43494 None:intergenic 50.0%
AGGTAGCGAACTCCACTTTG+CGG + tig0021860:43559-43578 Msa1394540:intron 50.0%
CAACCCCTCTCATATTTGGC+AGG + tig0021860:43633-43652 Msa1394540:intron 50.0%
CCCTCTCATATTTGGCAGGT+TGG + tig0021860:43637-43656 Msa1394540:intron 50.0%
GTGCGTGGGATAATTGTAGG+GGG - tig0021860:43825-43844 None:intergenic 50.0%
CCAACTCAACCCCTGGTAAT+AGG - tig0021860:44840-44859 None:intergenic 50.0%
CCTATTACCAGGGGTTGAGT+TGG + tig0021860:44837-44856 Msa1394540:intron 50.0%
ACGTGCTTGCTTGCATTCTC+TGG - tig0021860:46394-46413 None:intergenic 50.0%
CATCAATGAGTCTGCGACCT+CGG - tig0021860:46428-46447 None:intergenic 50.0%
GAGGTCGCAGACTCATTGAT+GGG + tig0021860:46427-46446 Msa1394540:five_prime_UTR 50.0%
! GCAGACTCATTGATGGGTCT+TGG + tig0021860:46433-46452 Msa1394540:five_prime_UTR 50.0%
ACTAAAGCTCCTGCATACGC+AGG + tig0021860:46608-46627 Msa1394540:intron 50.0%
CTAAAGCTCCTGCATACGCA+GGG + tig0021860:46609-46628 Msa1394540:intron 50.0%
TCACGTGACTGAAAGGTCAC+GGG - tig0021860:46718-46737 None:intergenic 50.0%
GTCACGTGACTGAAAGGTCA+CGG - tig0021860:46719-46738 None:intergenic 50.0%
GTGGTTGTCACGTGACTGAA+AGG - tig0021860:46725-46744 None:intergenic 50.0%
!! GCTAGAGAGGAGTAGTGGAT+TGG - tig0021860:46868-46887 None:intergenic 50.0%
TGATGCCATCACCATGTAGC+TGG + tig0021860:46971-46990 Msa1394540:intron 50.0%
TCTCTCCAGCTACATGGTGA+TGG - tig0021860:46979-46998 None:intergenic 50.0%
!! ACCATCCATTAGGGGTGTTG+AGG + tig0021860:47633-47652 Msa1394540:intron 50.0%
!! CCATCCATTAGGGGTGTTGA+GGG + tig0021860:47634-47653 Msa1394540:intron 50.0%
AACACCCTCAACACCCCTAA+TGG - tig0021860:47641-47660 None:intergenic 50.0%
!!! GCCTCTAGAGCAAGCTTTTG+AGG - tig0021860:48138-48157 None:intergenic 50.0%
!! AAAAGCTTGCTCTAGAGGCG+AGG + tig0021860:48139-48158 Msa1394540:intron 50.0%
!! GCATGAGGGGGTGTTGTTAT+TGG - tig0021860:48240-48259 None:intergenic 50.0%
GGCTAATAGTAGGCATGAGG+GGG - tig0021860:48252-48271 None:intergenic 50.0%
TTAAGAGGCGAGGATTGCTC+AGG + tig0021860:48376-48395 Msa1394540:intron 50.0%
! GGCTTTATCTCCAGTCGTTG+TGG + tig0021860:48417-48436 Msa1394540:intron 50.0%
! AGAGTCAAAAGGGGGTGCAT+CGG + tig0021860:48610-48629 Msa1394540:intron 50.0%
! GCTTCCCTTCTAGTTGAGGA+GGG + tig0021860:48833-48852 Msa1394540:five_prime_UTR 50.0%
! CTTCCCTTCTAGTTGAGGAG+GGG + tig0021860:48834-48853 Msa1394540:five_prime_UTR 50.0%
CTTTCCCCTCCTCAACTAGA+AGG - tig0021860:48841-48860 None:intergenic 50.0%
TGTTCCAGCTCCTAGACGAA+AGG + tig0021860:49126-49145 Msa1394540:five_prime_UTR 50.0%
TCTTCCCTGCTTGTGGGAAA+AGG + tig0021860:49420-49439 Msa1394540:intron 50.0%
! AACGCCTTTTCCCACAAGCA+GGG - tig0021860:49427-49446 None:intergenic 50.0%
! AAACGCCTTTTCCCACAAGC+AGG - tig0021860:49428-49447 None:intergenic 50.0%
CTCAAGACCACGAGCTAAGA+TGG - tig0021860:49665-49684 None:intergenic 50.0%
! CATCTTAGCTCGTGGTCTTG+AGG + tig0021860:49663-49682 Msa1394540:intron 50.0%
!! AACACTCTAAGGCTAGCACC+GGG - tig0021860:50000-50019 None:intergenic 50.0%
!! GAACACTCTAAGGCTAGCAC+CGG - tig0021860:50001-50020 None:intergenic 50.0%
!! GAGCTTAAGCTTTTGGCTGC+AGG + tig0021860:50178-50197 Msa1394540:intron 50.0%
ACAGGCAGATGAAGGAGAGA+GGG - tig0021860:50340-50359 None:intergenic 50.0%
AGGAAGACACAGGCAGATGA+AGG - tig0021860:50348-50367 None:intergenic 50.0%
CAGAAGCTAGAGGAAGACAC+AGG - tig0021860:50358-50377 None:intergenic 50.0%
TTCGGACGGTAAGAAGCAGA+GGG - tig0021860:50388-50407 None:intergenic 50.0%
TGGGGACCAAACAAGTGAGT+GGG + tig0021860:50443-50462 Msa1394540:intron 50.0%
CGAGGGAAAGGCAACGTAAT+TGG + tig0021860:50558-50577 Msa1394540:intron 50.0%
!! GAATGCTAAAGAGTGCCCCA+AGG + tig0021860:50685-50704 Msa1394540:intron 50.0%
!! AAAGAGTGCCCCAAGGGAAT+TGG + tig0021860:50692-50711 Msa1394540:intron 50.0%
! TCCTTACTGGTTGTTGCTGC+AGG + tig0021860:51262-51281 Msa1394540:intron 50.0%
! CCTTACTGGTTGTTGCTGCA+GGG + tig0021860:51263-51282 Msa1394540:intron 50.0%
TGCTGCAGGGCCAATCAAAA+AGG + tig0021860:51276-51295 Msa1394540:intron 50.0%
!!! CTGGAGCAACTTTTTTGCCC+TGG - tig0021860:51735-51754 None:intergenic 50.0%
GAAGGAGAGAAAGAAAGCCG+AGG + tig0021860:51769-51788 Msa1394540:five_prime_UTR 50.0%
TGACTCAGATGATGAGCCTC+AGG + tig0021860:51823-51842 Msa1394540:five_prime_UTR 50.0%
GCTACTACAAGGTCGTATCG+AGG + tig0021860:52512-52531 Msa1394540:CDS 50.0%
TGCGCAGAAATGAGGATAGG+AGG - tig0021860:52741-52760 None:intergenic 50.0%
TCCTTGCCGCATCTTGATGA+TGG - tig0021860:52782-52801 None:intergenic 50.0%
GGAGATCTGCAAGAACAGTC+AGG + tig0021860:53041-53060 Msa1394540:CDS 50.0%
TGCCAACTGAGCTATGCTCA+CGG - tig0021860:53149-53168 None:intergenic 50.0%
TGAGCATAGCTCAGTTGGCA+GGG + tig0021860:53149-53168 Msa1394540:intron 50.0%
CAGGGACATTGCAGCATACA+GGG + tig0021860:53167-53186 Msa1394540:intron 50.0%
AGGGACATTGCAGCATACAG+GGG + tig0021860:53168-53187 Msa1394540:intron 50.0%
ACATTGCAGCATACAGGGGT+CGG + tig0021860:53172-53191 Msa1394540:intron 50.0%
GTGAATAAGTGGGGAATCCG+GGG - tig0021860:53206-53225 None:intergenic 50.0%
GGTGAATAAGTGGGGAATCC+GGG - tig0021860:53207-53226 None:intergenic 50.0%
!! GGGGTGAATTTCTAGCCACT+AGG + tig0021860:53231-53250 Msa1394540:intron 50.0%
TCCCAATGCACTGCTCATCT+TGG + tig0021860:53346-53365 Msa1394540:intron 50.0%
GACCAAGATGAGCAGTGCAT+TGG - tig0021860:53351-53370 None:intergenic 50.0%
TATTCGGGATGCTTTGGCCT+CGG + tig0021860:53495-53514 Msa1394540:intron 50.0%
TTCCAGTGCACCACTAATCC+TGG + tig0021860:53529-53548 Msa1394540:intron 50.0%
! GCATCTAGGACCAGGATTAG+TGG - tig0021860:53542-53561 None:intergenic 50.0%
AATCCTGGTCCTAGATGCAC+CGG + tig0021860:53544-53563 Msa1394540:intron 50.0%
! AGGATGATGCCAGAGCATCT+GGG - tig0021860:53609-53628 None:intergenic 50.0%
! AAGGATGATGCCAGAGCATC+TGG - tig0021860:53610-53629 None:intergenic 50.0%
! AGTCAGTGCATCTGGAACGA+AGG - tig0021860:53629-53648 None:intergenic 50.0%
!! TCGTTCCAGATGCACTGACT+TGG + tig0021860:53629-53648 Msa1394540:intron 50.0%
AAAGGCCAAGTCAGTGCATC+TGG - tig0021860:53637-53656 None:intergenic 50.0%
TTAGGGAGGCTGAAGAAGTC+GGG - tig0021860:53812-53831 None:intergenic 50.0%
CTTAGGGAGGCTGAAGAAGT+CGG - tig0021860:53813-53832 None:intergenic 50.0%
GTTGGGAAGACAACTTAGGG+AGG - tig0021860:53826-53845 None:intergenic 50.0%
GCCTTTCACCCAAAAGGATC+CGG + tig0021860:54099-54118 Msa1394540:intron 50.0%
!! TCCGGATCCTTTTGGGTGAA+AGG - tig0021860:54103-54122 None:intergenic 50.0%
TTACTGCAACCTTCGCAGAG+AGG + tig0021860:54645-54664 Msa1394540:CDS 50.0%
AGACGACGCATTGTACGGTG+CGG + tig0021860:40826-40845 Msa1394540:five_prime_UTR 55.0%
CGGAGAAGAAGAAGACGCGT+CGG + tig0021860:40856-40875 Msa1394540:five_prime_UTR 55.0%
AGACGCGTCGGAGAATGAAG+AGG + tig0021860:40868-40887 Msa1394540:five_prime_UTR 55.0%
CGGCAACGGTGTAAATCCGT+TGG + tig0021860:40943-40962 Msa1394540:five_prime_UTR 55.0%
AACCACCGCAACAACCTCAC+CGG + tig0021860:41068-41087 Msa1394540:five_prime_UTR 55.0%
GGTAGGCCTAGCTGATGTAG+AGG + tig0021860:41475-41494 Msa1394540:five_prime_UTR 55.0%
AGGCCTAGCTGATGTAGAGG+AGG + tig0021860:41478-41497 Msa1394540:five_prime_UTR 55.0%
GGCGACTCGTATAGTGCATG+AGG - tig0021860:42100-42119 None:intergenic 55.0%
AGTGCCCATCCAAATCCACC+GGG + tig0021860:42481-42500 Msa1394540:intron 55.0%
! GATGTCCCGGTGGATTTGGA+TGG - tig0021860:42489-42508 None:intergenic 55.0%
CCAAGGATGTGATACGGGTC+AGG - tig0021860:42948-42967 None:intergenic 55.0%
CCTGACCCGTATCACATCCT+TGG + tig0021860:42945-42964 Msa1394540:five_prime_UTR 55.0%
CACATCCTTGGAGCTGTCCA+TGG + tig0021860:42957-42976 Msa1394540:five_prime_UTR 55.0%
TTGCACCATGGACAGCTCCA+AGG - tig0021860:42965-42984 None:intergenic 55.0%
GGAGCTGTCCATGGTGCAAT+TGG + tig0021860:42966-42985 Msa1394540:five_prime_UTR 55.0%
TGATGGGATGCCAGCCATGA+CGG - tig0021860:43458-43477 None:intergenic 55.0%
GGTAGCGAACTCCACTTTGC+GGG + tig0021860:43560-43579 Msa1394540:intron 55.0%
AGAGGAAAGCCTCGGCTCTA+AGG - tig0021860:43743-43762 None:intergenic 55.0%
GTGGGTGGCCATTTGGGAAA+AGG + tig0021860:44870-44889 Msa1394540:intron 55.0%
!! AAGCTTTGGAAAGGGGGGAG+GGG - tig0021860:46213-46232 None:intergenic 55.0%
!! CAAGCTTTGGAAAGGGGGGA+GGG - tig0021860:46214-46233 None:intergenic 55.0%
!! ACAAGCTTTGGAAAGGGGGG+AGG - tig0021860:46215-46234 None:intergenic 55.0%
!! GCACGTTGAGTTGATCACCG+AGG + tig0021860:46408-46427 Msa1394540:five_prime_UTR 55.0%
CGAGGTCGCAGACTCATTGA+TGG + tig0021860:46426-46445 Msa1394540:five_prime_UTR 55.0%
! TGCAGGAGCTTTAGTGCACC+AGG - tig0021860:46603-46622 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - tig0021860:46706-46725 None:intergenic 55.0%
AATTACCCAAGGGGGAGCCT+TGG - tig0021860:46760-46779 None:intergenic 55.0%
GGAGCTTCTCTCCAGCTACA+TGG - tig0021860:46985-47004 None:intergenic 55.0%
AAGCTCCAGAGAGATCTGCC+AGG + tig0021860:46998-47017 Msa1394540:intron 55.0%
CCCTCAACACCCCTAATGGA+TGG - tig0021860:47637-47656 None:intergenic 55.0%
!! TTAGTGGGAGGCACCCTCAT+CGG + tig0021860:47685-47704 Msa1394540:intron 55.0%
! CAGAGCTAGCTTAAGAGGCG+AGG + tig0021860:48366-48385 Msa1394540:intron 55.0%
! GAGTCAAAAGGGGGTGCATC+GGG + tig0021860:48611-48630 Msa1394540:intron 55.0%
! AGTCAAAAGGGGGTGCATCG+GGG + tig0021860:48612-48631 Msa1394540:intron 55.0%
! GGCTTCCCTTCTAGTTGAGG+AGG + tig0021860:48832-48851 Msa1394540:five_prime_UTR 55.0%
! GGTGAGGTACTTGCAGACTC+TGG + tig0021860:48965-48984 Msa1394540:intron 55.0%
ACTGGCATCTTCCCTGCTTG+TGG + tig0021860:49413-49432 Msa1394540:intron 55.0%
CTGGCATCTTCCCTGCTTGT+GGG + tig0021860:49414-49433 Msa1394540:intron 55.0%
TAGGCTGCCATCTTAGCTCG+TGG + tig0021860:49655-49674 Msa1394540:intron 55.0%
CACAGGCAGATGAAGGAGAG+AGG - tig0021860:50341-50360 None:intergenic 55.0%
GTTCGGACGGTAAGAAGCAG+AGG - tig0021860:50389-50408 None:intergenic 55.0%
CTGCTTCTTACCGTCCGAAC+AGG + tig0021860:50389-50408 Msa1394540:intron 55.0%
CTGGGGACCAAACAAGTGAG+TGG + tig0021860:50442-50461 Msa1394540:intron 55.0%
CCCTGCAGCAACAACCAGTA+AGG - tig0021860:51266-51285 None:intergenic 55.0%
GAGAAAGAAAGCCGAGGCAG+TGG + tig0021860:51775-51794 Msa1394540:five_prime_UTR 55.0%
AATTCCAGAGGCCACTGCCT+CGG - tig0021860:51789-51808 None:intergenic 55.0%
!! CAGTGGCCTCTGGAATTGAC+TGG + tig0021860:51792-51811 Msa1394540:five_prime_UTR 55.0%
GCCATCATCAAGATGCGGCA+AGG + tig0021860:52778-52797 Msa1394540:CDS 55.0%
CCAACTGAGCTATGCTCACG+GGG - tig0021860:53147-53166 None:intergenic 55.0%
GCCAACTGAGCTATGCTCAC+GGG - tig0021860:53148-53167 None:intergenic 55.0%
GTGAGCATAGCTCAGTTGGC+AGG + tig0021860:53148-53167 Msa1394540:intron 55.0%
GCAGGGACATTGCAGCATAC+AGG + tig0021860:53166-53185 Msa1394540:intron 55.0%
CATTGCAGCATACAGGGGTC+GGG + tig0021860:53173-53192 Msa1394540:intron 55.0%
ATTGCAGCATACAGGGGTCG+GGG + tig0021860:53174-53193 Msa1394540:intron 55.0%
GGTGCACTGGAAAAAGGCTC+AGG - tig0021860:53521-53540 None:intergenic 55.0%
! GACCAGGATTAGTGGTGCAC+TGG - tig0021860:53534-53553 None:intergenic 55.0%
AGGATGAAGCCGGTGCATCT+AGG - tig0021860:53556-53575 None:intergenic 55.0%
AGCCTTTGTCCCAGATGCTC+TGG + tig0021860:53597-53616 Msa1394540:intron 55.0%
! TGCCAGAGCATCTGGGACAA+AGG - tig0021860:53602-53621 None:intergenic 55.0%
ACTATCACCACTAGCGGCAC+TGG + tig0021860:54152-54171 Msa1394540:intron 55.0%
CTATCACCACTAGCGGCACT+GGG + tig0021860:54153-54172 Msa1394540:intron 55.0%
TATCACCACTAGCGGCACTG+GGG + tig0021860:54154-54173 Msa1394540:intron 55.0%
GCTCGGGCATACCATCATGT+TGG + tig0021860:54505-54524 Msa1394540:CDS 55.0%
CTGCGAAGGTTGCAGTAACC+AGG - tig0021860:54643-54662 None:intergenic 55.0%
TGTAAGCTGCCTCTCTGCGA+AGG - tig0021860:54657-54676 None:intergenic 55.0%
!! TGCGTCGTCTTCGGTGTCGA+CGG - tig0021860:40816-40835 None:intergenic 60.0%
TACCGGTGAGGTTGTTGCGG+TGG - tig0021860:41073-41092 None:intergenic 60.0%
GACGGTACCGCAGGCCAAAA+TGG - tig0021860:43440-43459 None:intergenic 60.0%
TTTGGCCTGCGGTACCGTCA+TGG + tig0021860:43441-43460 Msa1394540:intron 60.0%
!! GAAAGCCTCGGCTCTAAGGC+TGG - tig0021860:43739-43758 None:intergenic 60.0%
!! AGCTTTGGAAAGGGGGGAGG+GGG - tig0021860:46212-46231 None:intergenic 60.0%
CTCCTGCATACGCAGGGTCT+GGG + tig0021860:46615-46634 Msa1394540:intron 60.0%
TTCCCAGACCCTGCGTATGC+AGG - tig0021860:46620-46639 None:intergenic 60.0%
TGCATACGCAGGGTCTGGGA+AGG + tig0021860:46619-46638 Msa1394540:intron 60.0%
GCATACGCAGGGTCTGGGAA+GGG + tig0021860:46620-46639 Msa1394540:intron 60.0%
CATACGCAGGGTCTGGGAAG+GGG + tig0021860:46621-46640 Msa1394540:intron 60.0%
TGGGAAGGGGTCCCACCAAT+TGG + tig0021860:46634-46653 Msa1394540:intron 60.0%
ACCACTTTACCGCTGCGCCA+AGG + tig0021860:46740-46759 Msa1394540:intron 60.0%
!! TAGTGGGAGGCACCCTCATC+GGG + tig0021860:47686-47705 Msa1394540:intron 60.0%
! GCTCGTGGTCTTGAGGGTAC+TGG + tig0021860:49670-49689 Msa1394540:intron 60.0%
GGGCAGTTCGCAGAAGCTAG+AGG - tig0021860:50368-50387 None:intergenic 60.0%
AGGTACGGCCTTGGTCAACC+TGG + tig0021860:52948-52967 Msa1394540:intron 60.0%
! GAAGTCTGAAACCCAGCGCC+AGG - tig0021860:52969-52988 None:intergenic 60.0%
CCCCGTGAGCATAGCTCAGT+TGG + tig0021860:53144-53163 Msa1394540:intron 60.0%
CTGGAAAAAGGCTCAGGCCG+AGG - tig0021860:53515-53534 None:intergenic 60.0%
! AAGCCGGTGCATCTAGGACC+AGG - tig0021860:53550-53569 None:intergenic 60.0%
!! CCTCGGCTCTAAGGCTGGCA+GGG - tig0021860:43734-43753 None:intergenic 65.0%
!! GCTTTGGAAAGGGGGGAGGG+GGG - tig0021860:46211-46230 None:intergenic 65.0%
GCTCCTGCATACGCAGGGTC+TGG + tig0021860:46614-46633 Msa1394540:intron 65.0%
GCCTTGGCGCAGCGGTAAAG+TGG - tig0021860:46744-46763 None:intergenic 65.0%
!! CTCTAAGGCTAGCACCGGGC+AGG - tig0021860:49996-50015 None:intergenic 65.0%
AAAGCCGAGGCAGTGGCCTC+TGG + tig0021860:51782-51801 Msa1394540:five_prime_UTR 65.0%
GCCTTGGTCAACCTGGCGCT+GGG + tig0021860:52955-52974 Msa1394540:CDS 65.0%
! ACCCAGCGCCAGGTTGACCA+AGG - tig0021860:52959-52978 None:intergenic 65.0%
! TCAGTCCCCAGTGCCGCTAG+TGG - tig0021860:54162-54181 None:intergenic 65.0%
GCCTGCGGTACCGTCATGGC+TGG + tig0021860:43445-43464 Msa1394540:intron 70.0%
GCCAGCCATGACGGTACCGC+AGG - tig0021860:43449-43468 None:intergenic 70.0%
CCCTGCCAGCCTTAGAGCCG+AGG + tig0021860:43731-43750 Msa1394540:intron 70.0%
!! GCCTCGGCTCTAAGGCTGGC+AGG - tig0021860:43735-43754 None:intergenic 70.0%
TGGAAAGGGGGGAGGGGGGA+GGG - tig0021860:46207-46226 None:intergenic 70.0%
TTGGAAAGGGGGGAGGGGGG+AGG - tig0021860:46208-46227 None:intergenic 70.0%
AAGGGGGAGCCTTGGCGCAG+CGG - tig0021860:46752-46771 None:intergenic 70.0%
CTGCGCCAAGGCTCCCCCTT+GGG + tig0021860:46752-46771 Msa1394540:intron 70.0%
GGCCTTGGTCAACCTGGCGC+TGG + tig0021860:52954-52973 Msa1394540:CDS 70.0%
AGGGGTCGGGGTTCGAACCC+CGG + tig0021860:53186-53205 Msa1394540:intron 70.0%
AAAGGGGGGAGGGGGGAGGG+GGG - tig0021860:46204-46223 None:intergenic 75.0%
GAAAGGGGGGAGGGGGGAGG+GGG - tig0021860:46205-46224 None:intergenic 75.0%
GGAAAGGGGGGAGGGGGGAG+GGG - tig0021860:46206-46225 None:intergenic 75.0%
GCTGCGCCAAGGCTCCCCCT+TGG + tig0021860:46751-46770 Msa1394540:intron 75.0%
! AGGGGGGAGGGGGGACGTGC+TGG - tig0021860:46195-46214 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
tig0021860 gene 40733 55061 40733 ID=Msa1394540;Name=Msa1394540
tig0021860 mRNA 40733 55061 40733 ID=Msa1394540-mRNA-1;Parent=Msa1394540;Name=Msa1394540-mRNA-1;_AED=0.24;_eAED=0.24;_QI=2247|1|1|1|0.76|0.72|18|308|227
tig0021860 exon 40733 41089 40733 ID=Msa1394540-mRNA-1:exon:14397;Parent=Msa1394540-mRNA-1
tig0021860 exon 41430 41538 41430 ID=Msa1394540-mRNA-1:exon:14398;Parent=Msa1394540-mRNA-1
tig0021860 exon 42017 42130 42017 ID=Msa1394540-mRNA-1:exon:14399;Parent=Msa1394540-mRNA-1
tig0021860 exon 42900 43081 42900 ID=Msa1394540-mRNA-1:exon:14400;Parent=Msa1394540-mRNA-1
tig0021860 exon 44471 44663 44471 ID=Msa1394540-mRNA-1:exon:14401;Parent=Msa1394540-mRNA-1
tig0021860 exon 45361 45609 45361 ID=Msa1394540-mRNA-1:exon:14402;Parent=Msa1394540-mRNA-1
tig0021860 exon 46370 46516 46370 ID=Msa1394540-mRNA-1:exon:14403;Parent=Msa1394540-mRNA-1
tig0021860 exon 47879 47957 47879 ID=Msa1394540-mRNA-1:exon:14404;Parent=Msa1394540-mRNA-1
tig0021860 exon 48789 48902 48789 ID=Msa1394540-mRNA-1:exon:14405;Parent=Msa1394540-mRNA-1
tig0021860 exon 48981 49147 48981 ID=Msa1394540-mRNA-1:exon:14406;Parent=Msa1394540-mRNA-1
tig0021860 exon 51284 51497 51284 ID=Msa1394540-mRNA-1:exon:14407;Parent=Msa1394540-mRNA-1
tig0021860 exon 51721 51844 51721 ID=Msa1394540-mRNA-1:exon:14408;Parent=Msa1394540-mRNA-1
tig0021860 exon 51944 52012 51944 ID=Msa1394540-mRNA-1:exon:14409;Parent=Msa1394540-mRNA-1
tig0021860 exon 52085 52211 52085 ID=Msa1394540-mRNA-1:exon:14410;Parent=Msa1394540-mRNA-1
tig0021860 exon 52419 52533 52419 ID=Msa1394540-mRNA-1:exon:14411;Parent=Msa1394540-mRNA-1
tig0021860 exon 52668 52858 52668 ID=Msa1394540-mRNA-1:exon:14412;Parent=Msa1394540-mRNA-1
tig0021860 exon 52950 53062 52950 ID=Msa1394540-mRNA-1:exon:14413;Parent=Msa1394540-mRNA-1
tig0021860 exon 54487 55061 54487 ID=Msa1394540-mRNA-1:exon:14414;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 40733 41089 40733 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 41430 41538 41430 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 42017 42130 42017 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 42900 43081 42900 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 44471 44663 44471 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 45361 45609 45361 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 46370 46516 46370 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 47879 47957 47879 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 48789 48902 48789 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 48981 49147 48981 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 51284 51497 51284 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 51721 51844 51721 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 51944 52012 51944 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 52085 52211 52085 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 five_prime_UTR 52419 52420 52419 ID=Msa1394540-mRNA-1:five_prime_utr;Parent=Msa1394540-mRNA-1
tig0021860 CDS 52421 52533 52421 ID=Msa1394540-mRNA-1:cds;Parent=Msa1394540-mRNA-1
tig0021860 CDS 52668 52858 52668 ID=Msa1394540-mRNA-1:cds;Parent=Msa1394540-mRNA-1
tig0021860 CDS 52950 53062 52950 ID=Msa1394540-mRNA-1:cds;Parent=Msa1394540-mRNA-1
tig0021860 CDS 54487 54753 54487 ID=Msa1394540-mRNA-1:cds;Parent=Msa1394540-mRNA-1
tig0021860 three_prime_UTR 54754 55061 54754 ID=Msa1394540-mRNA-1:three_prime_utr;Parent=Msa1394540-mRNA-1
Gene Sequence

>Msa1394540

ATGGCATACAACACCACAGATCCTAAACAAGGTTTTGATTGTGTAAAAGACATGGTTCAACAACATGCACATAGTGTTGCAGCTTGGAATTGCTACTACAAGGTCGTATCGAGACTGGAAAACCGAGATACAAGGCATGACAAATTTTTACGTTCCATGCAAGGAAAATTTGTCGATTGTGTGCCTCCTATCCTCATTTCTGCGCATCAGTTTACTCTATGTAGCCATCATCAAGATGCGGCAAGGAAATATCTTGAAGCTTATAAACTTCTGCCTGAGAATCCATTGGTTAATCTTTGTGTCGGTACGGCCTTGGTCAACCTGGCGCTGGGTTTCAGACTTCAAAATAAGCATCAGTGTGTTGTACAAGGTTTAGCATTCCTCTACAATAATTTGGAGATCTGCAAGAACAGTCAGGAATCTTTATACAACATAGCTCGGGCATACCATCATGTTGGTCTTGTAACACTGGCAGCAATATATTATGAGAAGGTGATTGCTATTAGGGAGAGAGACTATCCAATTCCTAAACTTCAAAATGAGAGTATTGATGTCATTGAAAATCACAAACCTGGTTACTGCAACCTTCGCAGAGAGGCAGCTTACAATCTGCATTTAATCTACAAAAGGAGTGGGGCTGTCGATCTTGCTAGACAAGTTTTGAAAGATCATTGTTCCGTTTGA
Protein sequence

>Msa1394540

MAYNTTDPKQGFDCVKDMVQQHAHSVAAWNCYYKVVSRLENRDTRHDKFLRSMQGKFVDCVPPILISAHQFTLCSHHQDAARKYLEAYKLLPENPLVNLCVGTALVNLALGFRLQNKHQCVVQGLAFLYNNLEICKNSQESLYNIARAYHHVGLVTLAAIYYEKVIAIRERDYPIPKLQNESIDVIENHKPGYCNLRREAAYNLHLIYKRSGAVDLARQVLKDHCSV*