AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0021460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021460 MtrunA17_Chr1g0166741 96.891 579 18 0 1 579 3 581 0.0 1156
Msa0021460 MtrunA17_Chr1g0166791 81.271 582 99 2 1 575 3 581 0.0 989
Msa0021460 MtrunA17_Chr1g0166771 89.852 542 55 0 39 580 5 546 0.0 983
Msa0021460 MtrunA17_Chr1g0187241 69.492 590 168 4 1 580 1 588 0.0 865
Msa0021460 MtrunA17_Chr1g0166711 72.432 584 153 2 1 577 1 583 0.0 857
Msa0021460 MtrunA17_Chr7g0261811 58.304 566 225 4 8 564 10 573 0.0 708
Msa0021460 MtrunA17_Chr7g0261881 57.774 566 228 4 8 564 10 573 0.0 704
Msa0021460 MtrunA17_Chr7g0261791 59.115 565 219 4 2 556 6 568 0.0 698
Msa0021460 MtrunA17_Chr7g0261771 57.420 566 230 5 8 564 14 577 0.0 697
Msa0021460 MtrunA17_Chr1g0166731 73.561 469 116 2 111 572 8 475 0.0 684
Msa0021460 MtrunA17_Chr7g0261851 58.407 565 224 4 1 556 4 566 0.0 671
Msa0021460 MtrunA17_Chr7g0261661 57.050 461 187 5 113 564 1 459 0.0 551
Msa0021460 MtrunA17_Chr3g0114501 47.652 575 287 5 8 572 5 575 0.0 542
Msa0021460 MtrunA17_Chr7g0261751 52.000 500 193 6 8 462 14 511 0.0 530
Msa0021460 MtrunA17_Chr8g0375311 42.732 571 308 4 1 555 12 579 5.61e-173 503
Msa0021460 MtrunA17_Chr8g0375291 43.363 565 301 4 2 550 13 574 1.02e-172 502
Msa0021460 MtrunA17_Chr3g0104011 43.630 573 304 7 1 561 1 566 1.63e-166 486
Msa0021460 MtrunA17_Chr7g0241741 42.049 566 312 5 10 564 7 567 1.96e-162 475
Msa0021460 MtrunA17_Chr8g0375351 40.000 575 318 6 1 555 12 579 2.04e-159 468
Msa0021460 MtrunA17_Chr4g0005901 42.077 568 309 6 2 558 13 571 2.96e-159 467
Msa0021460 MtrunA17_Chr8g0375341 39.405 571 327 4 1 555 12 579 3.53e-158 465
Msa0021460 MtrunA17_Chr8g0375321 40.426 564 313 5 8 555 20 576 2.37e-156 460
Msa0021460 MtrunA17_Chr8g0375331 40.780 564 311 5 8 555 7 563 1.15e-154 455
Msa0021460 MtrunA17_Chr7g0261731 59.763 338 133 2 8 344 14 349 2.65e-152 441
Msa0021460 MtrunA17_Chr7g0240381 40.603 564 317 10 9 567 13 563 3.23e-146 434
Msa0021460 MtrunA17_Chr8g0375361 38.569 573 334 4 1 558 12 581 2.62e-145 432
Msa0021460 MtrunA17_Chr3g0112611 39.464 560 319 8 8 555 15 566 2.83e-145 432
Msa0021460 MtrunA17_Chr3g0112671 39.748 556 321 8 8 559 16 561 1.57e-144 430
Msa0021460 MtrunA17_Chr4g0008651 38.652 564 330 9 9 563 18 574 5.37e-139 416
Msa0021460 MtrunA17_Chr3g0142101 38.256 562 329 9 2 555 12 563 1.26e-138 415
Msa0021460 MtrunA17_Chr3g0142091 39.261 568 329 8 2 561 3 562 1.44e-137 412
Msa0021460 MtrunA17_Chr3g0077151 38.968 562 297 8 11 558 14 543 8.74e-134 401
Msa0021460 MtrunA17_Chr4g0014781 38.198 555 310 8 13 556 17 549 1.15e-130 393
Msa0021460 MtrunA17_Chr4g0014871 37.770 556 312 8 13 556 18 551 2.35e-130 392
Msa0021460 MtrunA17_Chr4g0014841 38.351 558 307 8 11 556 15 547 1.43e-129 390
Msa0021460 MtrunA17_Chr4g0014791 39.209 556 301 8 13 556 17 547 2.51e-129 390
Msa0021460 MtrunA17_Chr5g0422881 36.347 553 337 5 19 558 14 564 1.50e-127 386
Msa0021460 MtrunA17_Chr4g0014801 38.559 555 308 8 13 556 17 549 1.52e-127 385
Msa0021460 MtrunA17_Chr5g0399061 36.918 558 332 6 17 558 19 572 2.17e-126 383
Msa0021460 MtrunA17_Chr5g0399071 38.408 578 335 7 17 579 17 588 4.72e-126 382
Msa0021460 MtrunA17_Chr7g0255621 35.614 570 340 7 2 555 4 562 1.40e-124 379
Msa0021460 MtrunA17_Chr5g0400371 35.169 563 350 4 9 557 96 657 1.28e-123 379
Msa0021460 MtrunA17_Chr7g0255601 35.552 571 348 6 1 555 3 569 5.81e-123 375
Msa0021460 MtrunA17_Chr4g0056431 39.177 559 321 5 17 558 17 573 1.22e-122 374
Msa0021460 MtrunA17_Chr1g0213711 34.526 559 357 5 5 557 1 556 2.04e-122 373
Msa0021460 MtrunA17_Chr4g0054891 34.650 557 354 4 8 555 93 648 1.87e-121 373
Msa0021460 MtrunA17_Chr5g0439381 38.351 558 325 5 13 563 16 561 3.46e-121 370
Msa0021460 MtrunA17_Chr8g0353031 39.416 548 291 8 26 553 19 545 1.80e-120 367
Msa0021460 MtrunA17_Chr4g0063591 37.861 589 340 7 1 576 1 576 2.87e-120 367
Msa0021460 MtrunA17_Chr7g0217461 34.875 562 346 5 11 555 10 568 6.27e-120 367
Msa0021460 MtrunA17_Chr7g0218851 35.009 557 353 5 18 567 39 593 8.60e-119 364
Msa0021460 MtrunA17_Chr7g0214461 34.007 544 352 4 29 567 82 623 2.16e-118 364
Msa0021460 MtrunA17_Chr7g0255611 34.957 575 348 9 1 555 3 571 2.37e-118 363
Msa0021460 MtrunA17_Chr2g0284701 34.615 572 350 7 13 560 19 590 6.72e-112 346
Msa0021460 MtrunA17_Chr7g0214731 34.609 575 356 8 6 560 40 614 1.63e-111 347
Msa0021460 MtrunA17_Chr5g0415791 34.669 574 344 6 25 575 29 594 3.32e-110 342
Msa0021460 MtrunA17_Chr4g0011041 32.337 569 365 8 2 555 15 578 5.07e-109 338
Msa0021460 MtrunA17_Chr5g0415961 33.803 568 351 6 13 560 12 574 7.12e-105 327
Msa0021460 MtrunA17_Chr2g0276751 33.157 567 361 8 1 562 14 567 6.54e-104 325
Msa0021460 MtrunA17_Chr4g0011471 33.959 533 336 5 36 555 27 556 1.14e-101 319
Msa0021460 MtrunA17_Chr3g0133341 33.333 543 343 6 24 555 13 547 1.50e-101 318
Msa0021460 MtrunA17_Chr8g0362711 32.337 569 353 7 14 559 13 572 4.55e-99 312
Msa0021460 MtrunA17_Chr4g0060001 32.715 593 371 10 1 569 1 589 1.30e-98 312
Msa0021460 MtrunA17_Chr7g0271221 32.136 557 366 6 12 564 4 552 9.17e-98 309
Msa0021460 MtrunA17_Chr1g0193391 31.579 570 372 9 6 569 1 558 6.47e-97 308
Msa0021460 MtrunA17_Chr4g0014861 37.619 420 242 5 148 556 16 426 9.10e-97 301
Msa0021460 MtrunA17_Chr3g0082631 36.307 482 242 8 109 558 11 459 1.22e-95 300
Msa0021460 MtrunA17_Chr8g0379971 34.118 595 344 13 9 560 4 593 7.66e-95 302
Msa0021460 MtrunA17_Chr7g0240271 31.504 565 370 6 8 557 7 569 1.10e-93 298
Msa0021460 MtrunA17_Chr4g0059981 30.808 594 376 8 5 567 1 590 8.94e-93 296
Msa0021460 MtrunA17_Chr4g0059991 32.275 567 358 8 30 574 27 589 2.05e-92 296
Msa0021460 MtrunA17_Chr4g0059971 32.369 553 343 8 30 558 39 584 4.15e-92 295
Msa0021460 MtrunA17_Chr8g0362781 30.490 551 363 5 24 555 29 578 1.14e-89 288
Msa0021460 MtrunA17_Chr7g0240281 33.630 562 355 9 12 556 10 570 4.38e-89 286
Msa0021460 MtrunA17_Chr8g0390331 29.947 571 372 8 19 571 9 569 3.78e-88 284
Msa0021460 MtrunA17_Chr4g0069581 32.015 531 351 5 42 568 3 527 1.39e-87 282
Msa0021460 MtrunA17_Chr1g0157601 31.330 549 341 11 29 555 19 553 5.17e-87 280
Msa0021460 MtrunA17_Chr8g0362801 33.833 467 290 6 113 562 1 465 1.25e-85 274
Msa0021460 MtrunA17_Chr6g0451841 30.645 558 327 12 32 560 12 538 8.20e-83 269
Msa0021460 MtrunA17_Chr8g0379991 31.107 569 335 9 46 560 1 566 5.23e-80 262
Msa0021460 MtrunA17_Chr1g0147631 30.254 552 352 9 25 555 25 564 2.34e-79 261
Msa0021460 MtrunA17_Chr1g0157611 29.529 552 357 10 24 555 15 554 1.80e-77 255
Msa0021460 MtrunA17_Chr2g0331471 31.023 577 356 15 25 574 88 649 3.56e-77 258
Msa0021460 MtrunA17_Chr4g0003761 29.369 555 365 12 29 565 34 579 4.28e-75 250
Msa0021460 MtrunA17_Chr7g0235521 33.043 460 291 6 113 557 1 458 8.96e-75 246
Msa0021460 MtrunA17_Chr2g0331481 31.023 577 355 16 25 574 26 586 1.16e-74 250
Msa0021460 MtrunA17_Chr1g0157621 30.038 526 343 10 46 555 1 517 2.17e-74 247
Msa0021460 MtrunA17_Chr2g0331511 29.696 559 348 15 25 555 21 562 8.80e-74 247
Msa0021460 MtrunA17_Chr7g0240181 33.043 460 291 6 113 557 1 458 9.27e-74 243
Msa0021460 MtrunA17_Chr7g0240211 33.043 460 291 6 113 557 1 458 9.77e-74 243
Msa0021460 MtrunA17_Chr7g0240131 32.826 460 292 6 113 557 1 458 2.98e-73 242
Msa0021460 MtrunA17_Chr2g0331521 26.244 583 390 13 25 579 22 592 4.04e-72 242
Msa0021460 MtrunA17_Chr2g0325951 27.158 556 379 7 13 555 2 544 2.09e-71 239
Msa0021460 MtrunA17_Chr3g0142111 37.338 308 187 3 2 307 23 326 1.60e-69 228
Msa0021460 MtrunA17_Chr7g0261721 53.266 199 86 2 370 561 6 204 1.49e-68 221
Msa0021460 MtrunA17_Chr7g0240151 31.957 460 278 7 113 557 1 440 5.15e-68 228
Msa0021460 MtrunA17_Chr2g0326211 27.957 558 372 10 13 555 2 544 8.86e-68 229
Msa0021460 MtrunA17_Chr5g0415841 30.870 460 297 7 113 555 1 456 2.23e-67 226
Msa0021460 MtrunA17_Chr2g0325961 28.064 563 366 10 13 555 2 545 1.61e-66 226
Msa0021460 MtrunA17_Chr2g0331461 29.636 577 365 16 25 579 26 583 8.38e-66 226
Msa0021460 MtrunA17_Chr7g0234381 32.667 450 267 7 110 555 1 418 3.26e-65 219
Msa0021460 MtrunA17_Chr1g0177591 28.597 549 358 14 25 560 42 569 7.10e-64 219
Msa0021460 MtrunA17_Chr3g0112631 36.552 290 166 6 300 577 3 286 5.22e-62 206
Msa0021460 MtrunA17_Chr7g0234151 32.000 450 270 7 110 555 1 418 9.15e-62 209
Msa0021460 MtrunA17_Chr7g0234181 31.900 442 271 7 115 555 1 413 7.51e-59 202
Msa0021460 MtrunA17_Chr1g0177611 29.454 421 277 9 151 560 29 440 7.03e-55 192
Msa0021460 MtrunA17_Chr3g0142121 38.521 257 154 4 301 555 11 265 1.37e-53 184
Msa0021460 MtrunA17_Chr1g0166721 63.846 130 42 1 1 130 1 125 4.46e-53 177
Msa0021460 MtrunA17_Chr1g0177631 29.286 420 279 8 151 560 29 440 6.31e-53 187
Msa0021460 MtrunA17_Chr4g0060071 33.779 299 181 4 270 555 1 295 2.92e-48 170
Msa0021460 MtrunA17_Chr7g0261831 49.359 156 75 3 255 408 1 154 2.66e-45 159
Msa0021460 MtrunA17_Chr7g0261671 66.019 103 35 0 8 110 15 117 4.71e-44 152
Msa0021460 MtrunA17_Chr3g0112651 42.353 170 93 1 111 280 20 184 1.96e-38 140
Msa0021460 MtrunA17_Chr1g0147591 32.500 200 119 4 149 338 3 196 1.12e-27 110
Msa0021460 MtrunA17_Chr7g0261821 61.194 67 26 0 496 562 1 67 3.35e-23 93.2
Msa0021460 MtrunA17_Chr4g0014851 41.837 98 57 0 13 110 18 115 4.51e-23 96.3
Msa0021460 MtrunA17_Chr3g0112661 41.584 101 59 0 10 110 16 116 9.06e-22 91.7
Msa0021460 MtrunA17_Chr4g0060061 36.364 121 77 0 138 258 8 128 6.64e-21 89.0
Msa0021460 MtrunA17_Chr2g0326221 26.754 228 144 5 329 555 15 220 2.05e-16 78.6
Msa0021460 MtrunA17_Chr8g0362791 40.698 86 51 0 30 115 41 126 1.35e-15 74.3
Msa0021460 MtrunA17_Chr3g0082621 47.761 67 35 0 44 110 5 71 1.08e-14 69.7
Msa0021460 MtrunA17_Chr4g0060051 34.906 106 66 1 1 106 1 103 1.61e-14 70.5
Msa0021460 MtrunA17_Chr7g0261841 55.556 54 23 1 113 165 1 54 3.37e-13 65.5
Msa0021460 MtrunA17_Chr1g0166761 78.947 38 7 1 1 38 3 39 7.82e-12 61.2
Msa0021460 MtrunA17_Chr7g0240221 32.673 101 66 1 1 99 1 101 3.62e-11 60.8
Msa0021460 MtrunA17_Chr7g0240191 32.673 101 66 1 1 99 1 101 3.62e-11 60.8
Msa0021460 MtrunA17_Chr7g0240161 32.673 101 66 1 1 99 1 101 3.62e-11 60.8
Msa0021460 MtrunA17_Chr7g0240141 32.673 101 66 1 1 99 1 101 4.57e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021460 AT5G46050.1 62.586 580 205 4 6 576 6 582 0.0 723
Msa0021460 AT5G46040.1 61.646 571 207 4 6 567 6 573 0.0 689
Msa0021460 AT5G46050.2 60.888 473 173 4 113 576 1 470 0.0 561
Msa0021460 AT2G40460.1 48.929 560 268 6 10 560 7 557 0.0 542
Msa0021460 AT3G54140.1 43.056 576 309 6 1 564 1 569 1.49e-170 496
Msa0021460 AT3G54140.2 43.056 576 309 6 1 564 1 569 1.49e-170 496
Msa0021460 AT5G01180.2 42.606 568 309 5 10 565 8 570 5.24e-162 474
Msa0021460 AT5G01180.3 42.606 568 309 5 10 565 8 570 5.24e-162 474
Msa0021460 AT5G01180.1 42.606 568 309 5 10 565 8 570 5.24e-162 474
Msa0021460 AT2G02040.1 40.174 575 325 5 1 559 12 583 8.77e-161 472
Msa0021460 AT1G62200.1 41.835 545 311 2 12 551 37 580 9.56e-159 467
Msa0021460 AT1G62200.2 39.652 575 312 3 11 551 36 609 4.52e-152 451
Msa0021460 AT1G62200.3 39.652 575 312 3 11 551 50 623 7.37e-152 451
Msa0021460 AT3G53960.1 40.204 587 329 9 8 580 18 596 4.95e-149 442
Msa0021460 AT2G37900.1 39.383 551 321 6 8 553 19 561 3.18e-146 434
Msa0021460 AT2G02020.1 39.007 564 292 7 1 550 13 538 1.79e-143 426
Msa0021460 AT1G12110.1 38.676 574 334 6 17 577 17 585 3.87e-133 401
Msa0021460 AT3G54450.1 36.937 555 314 8 22 558 6 542 1.02e-130 394
Msa0021460 AT2G37900.2 39.836 487 280 6 72 553 4 482 1.02e-126 381
Msa0021460 AT1G32450.1 35.979 567 343 7 7 555 17 581 1.63e-121 372
Msa0021460 AT2G26690.1 37.500 560 329 5 8 555 5 555 2.43e-121 370
Msa0021460 AT1G72140.1 36.538 572 316 8 2 556 9 550 1.62e-120 367
Msa0021460 AT1G22540.1 36.757 555 320 8 15 558 18 552 2.58e-119 364
Msa0021460 AT2G02020.2 35.638 564 290 9 1 550 13 517 7.01e-119 362
Msa0021460 AT1G68570.1 37.753 543 320 5 29 555 25 565 3.60e-117 360
Msa0021460 AT1G68570.2 38.113 530 310 5 42 555 8 535 1.15e-116 358
Msa0021460 AT4G21680.1 34.921 567 339 7 11 555 12 570 4.60e-115 354
Msa0021460 AT1G22550.1 35.826 575 330 10 2 558 6 559 8.84e-115 353
Msa0021460 AT2G26690.2 38.023 526 305 5 42 555 6 522 5.94e-114 350
Msa0021460 AT5G19640.1 35.101 547 333 8 28 566 60 592 2.04e-113 351
Msa0021460 AT1G59740.1 34.046 561 365 4 9 564 23 583 2.38e-113 350
Msa0021460 AT2G26690.3 38.224 518 299 5 50 555 2 510 7.22e-112 344
Msa0021460 AT3G21670.1 37.300 563 328 5 12 561 11 561 2.39e-111 345
Msa0021460 AT1G22570.1 36.824 573 328 11 2 558 6 560 3.12e-110 341
Msa0021460 AT1G72130.1 34.168 559 322 9 6 556 11 531 3.88e-110 340
Msa0021460 AT1G72125.1 35.816 564 331 9 8 558 11 556 2.73e-109 338
Msa0021460 AT5G13400.1 34.266 572 358 8 6 559 41 612 1.36e-107 336
Msa0021460 AT1G33440.1 35.714 574 348 9 9 568 20 586 5.24e-107 334
Msa0021460 AT1G72120.1 35.575 565 327 10 8 558 11 552 2.35e-106 331
Msa0021460 AT1G69850.1 32.186 581 359 6 13 564 11 585 4.24e-104 326
Msa0021460 AT1G22570.2 37.476 531 299 10 44 558 10 523 8.15e-103 321
Msa0021460 AT1G69870.1 33.759 548 343 7 24 555 48 591 8.57e-102 321
Msa0021460 AT1G27040.1 32.035 565 367 4 1 555 1 558 1.39e-101 319
Msa0021460 AT1G27040.2 31.907 561 365 4 5 555 1 554 1.56e-100 316
Msa0021460 AT3G16180.1 31.707 574 362 9 25 576 21 586 6.75e-98 310
Msa0021460 AT1G18880.1 33.333 549 336 8 30 555 22 563 2.49e-95 303
Msa0021460 AT1G27040.3 31.870 524 340 4 42 555 10 526 5.33e-93 295
Msa0021460 AT1G52190.1 29.617 574 375 10 25 575 19 586 7.32e-93 297
Msa0021460 AT5G62680.1 31.818 550 345 8 30 555 46 589 6.15e-89 287
Msa0021460 AT5G14940.1 30.179 560 346 9 25 560 5 543 8.36e-89 285
Msa0021460 AT5G28470.2 30.216 556 364 10 22 563 12 557 3.57e-88 284
Msa0021460 AT3G25260.1 32.717 541 326 10 17 555 11 515 3.71e-87 280
Msa0021460 AT3G45700.1 32.528 538 338 11 26 558 15 532 7.44e-86 277
Msa0021460 AT5G28470.1 30.036 556 363 11 22 563 12 555 1.46e-85 277
Msa0021460 AT3G47960.1 32.000 550 342 9 30 555 64 605 2.76e-85 278
Msa0021460 AT1G27080.1 32.971 552 347 11 21 559 8 549 5.04e-85 276
Msa0021460 AT3G45650.1 31.570 567 350 9 6 558 1 543 2.89e-84 273
Msa0021460 AT1G69860.1 31.919 542 353 7 25 558 16 549 1.51e-83 271
Msa0021460 AT3G45710.1 31.383 564 348 11 11 558 4 544 2.41e-83 271
Msa0021460 AT3G45680.1 31.365 542 345 11 26 558 19 542 3.63e-82 268
Msa0021460 AT5G62730.1 29.577 568 358 7 13 560 42 587 8.69e-82 268
Msa0021460 AT1G72130.2 32.952 437 259 7 128 556 3 413 1.38e-80 259
Msa0021460 AT1G72130.3 32.952 437 259 7 128 556 3 413 1.38e-80 259
Msa0021460 AT3G01350.1 29.843 573 350 11 24 563 3 556 1.73e-80 264
Msa0021460 AT3G45650.2 30.354 593 349 11 6 558 1 569 5.90e-79 260
Msa0021460 AT3G45660.1 31.295 556 342 10 18 558 12 542 7.80e-79 259
Msa0021460 AT3G45660.3 31.295 556 342 10 18 558 12 542 7.80e-79 259
Msa0021460 AT3G45720.1 30.490 551 355 10 17 558 9 540 1.16e-78 258
Msa0021460 AT3G45660.2 31.115 556 343 10 18 558 33 563 1.21e-78 259
Msa0021460 AT1G27080.2 33.140 516 322 11 57 559 2 507 7.68e-77 253
Msa0021460 AT5G62730.2 29.562 548 344 7 33 560 3 528 1.85e-76 252
Msa0021460 AT3G25280.1 31.022 548 332 9 17 555 11 521 6.94e-76 250
Msa0021460 AT3G45690.1 30.855 538 312 16 26 558 17 499 5.32e-71 237
Msa0021460 AT2G38100.2 23.225 521 342 13 55 555 2 484 5.09e-34 135
Msa0021460 AT2G38100.1 23.225 521 342 13 55 555 18 500 6.18e-34 135
Msa0021460 AT2G38100.3 23.225 521 342 13 55 555 24 506 7.91e-34 135
Msa0021460 AT5G11570.1 31.579 247 162 4 312 555 234 476 6.50e-32 129
Msa0021460 AT5G11570.1 25.751 233 161 5 13 242 2 225 5.09e-21 97.1

Find 127 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAGGCTCTTCATGCTTTC+TGG 0.007486 1_1:-38313253 None:intergenic
TCCTTAGCTTAATCCCTATT+TGG 0.099616 1_1:+38312810 Msa0021460:CDS
TTTGAAAGAATTGCTTATTT+TGG 0.103448 1_1:+38309879 Msa0021460:CDS
ATCAATTTGTGTCTATAAAA+AGG 0.166876 1_1:-38311581 None:intergenic
CTAAGCTCATATAATTCTTT+AGG 0.174512 1_1:-38311683 None:intergenic
GCTTCCACAATTTATCCTTA+TGG 0.191675 1_1:+38313174 Msa0021460:CDS
TTCTGCCTTTGTTTATTTAT+CGG 0.205483 1_1:+38310064 Msa0021460:CDS
GATGGAACTATTGATCTTAA+AGG 0.228746 1_1:+38309099 Msa0021460:CDS
TCTAACTCTCTAAAAGTTCT+TGG 0.230349 1_1:+38313502 Msa0021460:CDS
ACATCCATTTCATGGCATTT+AGG 0.235530 1_1:-38311245 None:intergenic
TATAGACACAAATTGATTAA+AGG 0.242682 1_1:+38311587 Msa0021460:CDS
CTTCCACAATTTATCCTTAT+GGG 0.242929 1_1:+38313175 Msa0021460:CDS
TGGATGTCTTGCATTGTCTT+TGG 0.247040 1_1:+38311440 Msa0021460:CDS
AGCAATGTAAGCACCTAATA+TGG 0.250872 1_1:-38310006 None:intergenic
ATAAATGTAGCAACCCAAAT+AGG 0.258960 1_1:-38312824 None:intergenic
ACCTTAGCCATGCTAATAAA+TGG 0.270706 1_1:-38311614 None:intergenic
CATGGCATTTAGGTGGCTTT+AGG 0.282645 1_1:-38311235 None:intergenic
CTTGAACTTTGTCTTCTTTG+TGG 0.285699 1_1:+38313444 Msa0021460:CDS
TAAGCTCATATAATTCTTTA+GGG 0.288071 1_1:-38311682 None:intergenic
AATATCAATCATCACATTCT+TGG 0.288996 1_1:+38311550 Msa0021460:CDS
GGGAGTGGCTGAAGCACTTT+TGG 0.295185 1_1:+38313195 Msa0021460:CDS
CCTTAGCTTAATCCCTATTT+GGG 0.304195 1_1:+38312811 Msa0021460:CDS
CTTCCAACAATGTCAACAAT+TGG 0.331479 1_1:+38309961 Msa0021460:CDS
AGAATTATATGAGCTTAGTT+TGG 0.337781 1_1:+38311688 Msa0021460:CDS
GGATGTCTTGCATTGTCTTT+GGG 0.346838 1_1:+38311441 Msa0021460:CDS
ATACAAAGAAAGGCAAATTC+AGG 0.349133 1_1:+38311717 Msa0021460:CDS
TGTAATACCTCTAGGATTCT+TGG 0.350874 1_1:-38313026 None:intergenic
ATAGACACAAATTGATTAAA+GGG 0.352216 1_1:+38311588 Msa0021460:CDS
GATAATGTGGGTTGGACTCT+TGG 0.372044 1_1:+38311500 Msa0021460:CDS
AAAGTTCAAGACATTTAGTA+TGG 0.373089 1_1:-38313431 None:intergenic
GGATATGCTCTTCCAACTCT+TGG 0.378087 1_1:+38311521 Msa0021460:CDS
AGGTCATTGTGGCAGCTATA+AGG 0.378262 1_1:+38311633 Msa0021460:CDS
GATTAAGCTAAGGATTTGTT+TGG 0.378471 1_1:-38312801 None:intergenic
GTTTCTGATTTCCGATCAAT+TGG 0.383970 1_1:-38313554 None:intergenic
ATGCTCATCTTGGACGCTAT+TGG 0.389843 1_1:+38310030 Msa0021460:CDS
GTACATGCAGTTAAACTTGC+TGG 0.397071 1_1:-38312935 None:intergenic
TTGTTCCTTGCTTTATGAAA+AGG 0.399463 1_1:-38312877 None:intergenic
GCCACCTAAATGCCATGAAA+TGG 0.401237 1_1:+38311241 Msa0021460:CDS
TCATTAACTACTACTGGAAT+TGG 0.402950 1_1:+38313286 Msa0021460:CDS
AGCTTTCCAACCACCTGTCT+TGG 0.404551 1_1:-38309139 None:intergenic
TCATACTCATTAACTACTAC+TGG 0.407310 1_1:+38313280 Msa0021460:CDS
TATAATTCTTTAGGGTCATC+AGG 0.411938 1_1:-38311674 None:intergenic
TACATTATAGCAGCGGGAAC+AGG 0.413135 1_1:+38311323 Msa0021460:CDS
TACATTGCTGATGCTCATCT+TGG 0.413401 1_1:+38310020 Msa0021460:CDS
TAGGGTCAAAATCGTCAAAC+TGG 0.418534 1_1:-38311382 None:intergenic
AGCACCAATGGTTGAAATGT+TGG 0.423208 1_1:-38311357 None:intergenic
TAAATGTAGCAACCCAAATA+GGG 0.425848 1_1:-38312823 None:intergenic
AACCCAATTGTTGACATTGT+TGG 0.426281 1_1:-38309964 None:intergenic
GCACCAATGGTTGAAATGTT+GGG 0.430608 1_1:-38311356 None:intergenic
AAAGCTTGCTCATTTCTTGT+TGG 0.433680 1_1:+38309156 Msa0021460:CDS
TTAAGCTCTCATTCTTCAAC+TGG 0.434643 1_1:+38311417 Msa0021460:CDS
GCAATGGAAGAAGGCATGAT+TGG 0.445717 1_1:+38309060 None:intergenic
AGAGTTAGAAACTTCAGCTC+TGG 0.456396 1_1:-38313488 None:intergenic
TGTTCCTTGCTTTATGAAAA+GGG 0.460421 1_1:-38312876 None:intergenic
CATTTAGGTGGCTTTAGGCT+TGG 0.460828 1_1:-38311230 None:intergenic
AAGTCTATGTCTTTCAATCA+TGG 0.461265 1_1:-38313107 None:intergenic
TGTCCACACATGCCTTGTTA+AGG 0.465658 1_1:-38312721 None:intergenic
AATGGTTGAAATGTTGGGTT+TGG 0.467028 1_1:-38311351 None:intergenic
AGCAAAATGAATATGCTCAA+TGG 0.469181 1_1:-38313154 None:intergenic
TTCCAACAATGTCAACAATT+GGG 0.470599 1_1:+38309962 Msa0021460:CDS
GCAATGTAAGCACCTAATAT+GGG 0.476307 1_1:-38310005 None:intergenic
GGAAATGAGTACACAAAAGA+TGG 0.476556 1_1:+38309081 Msa0021460:CDS
TCTTTGATGAGTGGCGGAGC+TGG 0.477484 1_1:+38313594 Msa0021460:three_prime_UTR
AGCTCTGGAAACATAGAACT+TGG 0.480519 1_1:-38313473 None:intergenic
TTGGAAGAGTATACAAAGAA+AGG 0.482322 1_1:+38311707 Msa0021460:CDS
ACAATTTATCCTTATGGGAG+TGG 0.484555 1_1:+38313180 Msa0021460:CDS
TAGGTGGCTTTAGGCTTGGT+AGG 0.485426 1_1:-38311226 None:intergenic
AAACCCAACATTTCAACCAT+TGG 0.488482 1_1:+38311353 Msa0021460:CDS
GTGCTTCAGCCACTCCCATA+AGG 0.489466 1_1:-38313189 None:intergenic
AGTGTATGTACAAGATAATG+TGG 0.492346 1_1:+38311487 Msa0021460:CDS
AATATTATGGCAATGGAAGA+AGG 0.492661 1_1:+38309051 None:intergenic
TCCATTTATTAGCATGGCTA+AGG 0.503717 1_1:+38311613 Msa0021460:CDS
TGAAGAAGTGTAATACCTCT+AGG 0.507089 1_1:-38313034 None:intergenic
AGGGAGTCCATTTATTAGCA+TGG 0.513040 1_1:+38311607 Msa0021460:CDS
CCAGAAAGCATGAAGAGCCT+TGG 0.517929 1_1:+38313253 Msa0021460:CDS
GTCAAACTGGTCAGCACCAA+TGG 0.520660 1_1:-38311369 None:intergenic
ATTTGAGCAATCATTGCACT+TGG 0.524066 1_1:-38312848 None:intergenic
CCCAAATAGGGATTAAGCTA+AGG 0.524217 1_1:-38312811 None:intergenic
AGCTCTCATTCTTCAACTGG+TGG 0.525929 1_1:+38311420 Msa0021460:CDS
TTCTTCAAAGAATGAGTGTA+GGG 0.530753 1_1:+38313050 Msa0021460:CDS
AACAATGTCAACAATTGGGT+TGG 0.530864 1_1:+38309966 Msa0021460:CDS
TCAATCATCACATTCTTGGC+AGG 0.532239 1_1:+38311554 Msa0021460:CDS
GCCCTCTACATTATAGCAGC+GGG 0.550842 1_1:+38311317 Msa0021460:CDS
AGGTGGCTTTAGGCTTGGTA+GGG 0.557140 1_1:-38311225 None:intergenic
ACTGAGAAACATGGTGGTCG+AGG 0.558387 1_1:+38313352 Msa0021460:CDS
ATTATAGCAGCGGGAACAGG+TGG 0.561518 1_1:+38311326 Msa0021460:CDS
GATATTGCAAGTCCAAGAGT+TGG 0.565057 1_1:-38311533 None:intergenic
TCCATTTCATGGCATTTAGG+TGG 0.566798 1_1:-38311242 None:intergenic
CTTCTTCAAAGAATGAGTGT+AGG 0.566874 1_1:+38313049 Msa0021460:CDS
TGATGAGTGGCGGAGCTGGA+CGG 0.578293 1_1:+38313598 Msa0021460:three_prime_UTR
CATGTGCAGGTTCCTTAACA+AGG 0.579095 1_1:+38312709 Msa0021460:intron
GTTCCTTAACAAGGCATGTG+TGG 0.580950 1_1:+38312718 Msa0021460:CDS
ACAACTCTTAACAGATCCCT+TGG 0.582141 1_1:+38312896 Msa0021460:CDS
GATTATGTAAGTGAAAATCA+TGG 0.582508 1_1:-38312966 None:intergenic
GAAAGCAGGTACCAATTGAT+CGG 0.582529 1_1:+38313543 Msa0021460:exon
AGAAACATGGTGGTCGAGGG+TGG 0.584691 1_1:+38313356 Msa0021460:CDS
TCATGTCTACTGCAGTGTAT+GGG 0.587588 1_1:+38309853 Msa0021460:intron
ATGCACAATAACACAAGTAG+AGG 0.594066 1_1:+38312775 Msa0021460:CDS
CAACTGTCATTATCACTATG+TGG 0.596047 1_1:-38313081 None:intergenic
TATACTACATCTTTGATGAG+TGG 0.598729 1_1:+38313585 Msa0021460:three_prime_UTR
TTCCCGCTGCTATAATGTAG+AGG 0.599355 1_1:-38311319 None:intergenic
AATGGATGTTACAAAATGCA+AGG 0.601334 1_1:+38311259 Msa0021460:CDS
AAACTTACAGAGAAGAAAGC+AGG 0.603559 1_1:+38313529 Msa0021460:CDS
TCAGATCCAAGACAGGTGGT+TGG 0.608354 1_1:+38309133 Msa0021460:CDS
TCTGTTCTCAGATCCAAGAC+AGG 0.609180 1_1:+38309126 Msa0021460:CDS
AACAAGGCATGTGTGGACAC+TGG 0.610547 1_1:+38312725 Msa0021460:CDS
TTAATGAGTATGATGTTCCA+AGG 0.610874 1_1:-38313270 None:intergenic
ACTACATCTTTGATGAGTGG+CGG 0.612916 1_1:+38313588 Msa0021460:three_prime_UTR
GTTCAAGTACTAGTAACGAA+TGG 0.617855 1_1:+38312747 Msa0021460:CDS
GAACACAAATAGTGTTTGTG+TGG 0.618107 1_1:-38311288 None:intergenic
TGGAAGAGATGACAGTGCCT+TGG 0.622263 1_1:-38309944 None:intergenic
TGAAAGACATAGACTTAGTG+TGG 0.622321 1_1:+38313114 Msa0021460:CDS
TCCCGCTGCTATAATGTAGA+GGG 0.624948 1_1:-38311318 None:intergenic
TAGCATGGCTAAGGTCATTG+TGG 0.628074 1_1:+38311622 Msa0021460:CDS
TGCCCTCTACATTATAGCAG+CGG 0.631661 1_1:+38311316 Msa0021460:CDS
ACTCCCATAAGGATAAATTG+TGG 0.632204 1_1:-38313178 None:intergenic
CTGAGAAACATGGTGGTCGA+GGG 0.632880 1_1:+38313353 Msa0021460:CDS
ATGTACAAGATAATGTGGGT+TGG 0.661714 1_1:+38311492 Msa0021460:CDS
TCACATGTCACTGAGAAACA+TGG 0.664134 1_1:+38313343 Msa0021460:CDS
ACATACCGATAAATAAACAA+AGG 0.666237 1_1:-38310069 None:intergenic
GTGTATGTACAAGATAATGT+GGG 0.673777 1_1:+38311488 Msa0021460:CDS
GTTCTCAGATCCAAGACAGG+TGG 0.678500 1_1:+38309129 Msa0021460:CDS
CATGCAGTTAAACTTGCTGG+AGG 0.697718 1_1:-38312932 None:intergenic
TTGACAAAGAAGCTTCACCA+AGG 0.708677 1_1:+38309927 Msa0021460:CDS
AAGTTGACCAAGAATCCTAG+AGG 0.716009 1_1:+38313019 Msa0021460:CDS
TTATAGCAGCGGGAACAGGT+GGG 0.729222 1_1:+38311327 Msa0021460:CDS
CATGTCACTGAGAAACATGG+TGG 0.747015 1_1:+38313346 Msa0021460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATTATAATTTTTTTA+AGG - chr1_1:38312024-38312043 None:intergenic 0.0%
!! AATAATTGAACAATATATAT+AGG - chr1_1:38309273-38309292 None:intergenic 10.0%
!!! ACTAAATTTTTAAAAGAAAA+AGG + chr1_1:38310302-38310321 Msa0021460:intron 10.0%
!! TAAATTATTATAAAGGAAAT+AGG - chr1_1:38311157-38311176 None:intergenic 10.0%
!!! AAAAAATTCTGAATTTTTTT+TGG + chr1_1:38312117-38312136 Msa0021460:intron 10.0%
!!! TATAATATTTTTAACTTTTC+TGG + chr1_1:38312149-38312168 Msa0021460:intron 10.0%
!!! TGAATATTGAAAATTTTATA+GGG + chr1_1:38312233-38312252 Msa0021460:intron 10.0%
!!! TTTCTCTTATTTTAAAATAT+TGG + chr1_1:38312672-38312691 Msa0021460:intron 10.0%
!! AAAATATGTTAATTGTACTA+AGG - chr1_1:38309296-38309315 None:intergenic 15.0%
!! TAAAGATTATAAATAATCCA+CGG - chr1_1:38309447-38309466 None:intergenic 15.0%
!! ATAAAAAATAAGAGACATTA+TGG + chr1_1:38309469-38309488 Msa0021460:intron 15.0%
!!! AAGATAAAATTTTAGATTAG+AGG - chr1_1:38309669-38309688 None:intergenic 15.0%
!! AAATTAACATTCAATTCAAT+GGG - chr1_1:38309820-38309839 None:intergenic 15.0%
!! AAAATTAACATTCAATTCAA+TGG - chr1_1:38309821-38309840 None:intergenic 15.0%
!! TATCAAATATGCTTTATATT+TGG - chr1_1:38310593-38310612 None:intergenic 15.0%
!!! GACTTTTTAATTAAATGTAT+TGG - chr1_1:38310992-38311011 None:intergenic 15.0%
!! TAATGTATTATAAAGGAAAT+AGG - chr1_1:38311087-38311106 None:intergenic 15.0%
!! GTGTATTTAATGTATTATAA+AGG - chr1_1:38311094-38311113 None:intergenic 15.0%
!!! AATTTATTAGTTTTGGTTAT+TGG + chr1_1:38311171-38311190 Msa0021460:intron 15.0%
!! GAAAAATTGACATATTTATA+GGG - chr1_1:38311859-38311878 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr1_1:38311919-38311938 None:intergenic 15.0%
!!! AAATTTTCAATATTCACTTT+TGG - chr1_1:38312229-38312248 None:intergenic 15.0%
!!! GTGAATATTGAAAATTTTAT+AGG + chr1_1:38312232-38312251 Msa0021460:intron 15.0%
!!! TAAAAGAGATATATAGTTTT+GGG - chr1_1:38312336-38312355 None:intergenic 15.0%
!! TTCACTAGAAAAATGTTATT+CGG + chr1_1:38309215-38309234 Msa0021460:intron 20.0%
!!! AACAATTTTGGCATTTTTTT+CGG - chr1_1:38309403-38309422 None:intergenic 20.0%
!! AAAAAAATGCCAAAATTGTT+TGG + chr1_1:38309403-38309422 Msa0021460:intron 20.0%
!! TTTACCAACAAAGAAAATAA+TGG + chr1_1:38309687-38309706 Msa0021460:intron 20.0%
!!! TTTGAAAGAATTGCTTATTT+TGG + chr1_1:38309879-38309898 Msa0021460:CDS 20.0%
!!! GATCATTTTCTTATAAAATC+GGG - chr1_1:38310154-38310173 None:intergenic 20.0%
!!! GGATCATTTTCTTATAAAAT+CGG - chr1_1:38310155-38310174 None:intergenic 20.0%
!! TAAAGCATATTTGATATATC+TGG + chr1_1:38310597-38310616 Msa0021460:intron 20.0%
!!! GTGAAATTAGTTTATGATTT+AGG - chr1_1:38310659-38310678 None:intergenic 20.0%
!! TAAAATAACAATGAGAGAAT+GGG + chr1_1:38310684-38310703 Msa0021460:intron 20.0%
!! ATCAATTTGTGTCTATAAAA+AGG - chr1_1:38311584-38311603 None:intergenic 20.0%
!! TATAGACACAAATTGATTAA+AGG + chr1_1:38311587-38311606 Msa0021460:CDS 20.0%
!! ATAGACACAAATTGATTAAA+GGG + chr1_1:38311588-38311607 Msa0021460:CDS 20.0%
!! TAAGCTCATATAATTCTTTA+GGG - chr1_1:38311685-38311704 None:intergenic 20.0%
!!! TATAGGGTTAAATATGTTTT+TGG + chr1_1:38311832-38311851 Msa0021460:intron 20.0%
!! CGAAAAATTGACATATTTAT+AGG - chr1_1:38311860-38311879 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr1_1:38311920-38311939 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + chr1_1:38311923-38311942 Msa0021460:intron 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG + chr1_1:38312201-38312220 Msa0021460:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG + chr1_1:38312202-38312221 Msa0021460:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG + chr1_1:38312293-38312312 Msa0021460:intron 20.0%
!!! TTTTGGGTTAAATATGTTTT+TGG - chr1_1:38312320-38312339 None:intergenic 20.0%
!!! GTAAAAGAGATATATAGTTT+TGG - chr1_1:38312337-38312356 None:intergenic 20.0%
! ATTTGTAAGCAAAAACCTTA+AGG + chr1_1:38309521-38309540 Msa0021460:intron 25.0%
! TTACACTCTATAAGAGTAAA+TGG - chr1_1:38309587-38309606 None:intergenic 25.0%
!! ATGACCATTATTTTCTTTGT+TGG - chr1_1:38309694-38309713 None:intergenic 25.0%
! AAGCTTATCAACAACATATA+AGG - chr1_1:38309775-38309794 None:intergenic 25.0%
! ATTCAATTCAATGGGTAATA+TGG - chr1_1:38309812-38309831 None:intergenic 25.0%
!! TTCTGCCTTTGTTTATTTAT+CGG + chr1_1:38310064-38310083 Msa0021460:CDS 25.0%
! ACATACCGATAAATAAACAA+AGG - chr1_1:38310072-38310091 None:intergenic 25.0%
! TTTAGTTATTACCCTTTATC+CGG - chr1_1:38310288-38310307 None:intergenic 25.0%
! GTCTTATATCCTAACAATAA+AGG - chr1_1:38310547-38310566 None:intergenic 25.0%
! GTAAAATAACAATGAGAGAA+TGG + chr1_1:38310683-38310702 Msa0021460:intron 25.0%
! AAAATAACAATGAGAGAATG+GGG + chr1_1:38310685-38310704 Msa0021460:intron 25.0%
! ACATATCTTGCTTAGTATAT+TGG + chr1_1:38310789-38310808 Msa0021460:intron 25.0%
!! TTGGATAAGGTCTTATAATA+AGG + chr1_1:38310808-38310827 Msa0021460:intron 25.0%
!! TGGATAAGGTCTTATAATAA+GGG + chr1_1:38310809-38310828 Msa0021460:intron 25.0%
!!! GTCTTATAATAAGGGTTTTT+TGG + chr1_1:38310817-38310836 Msa0021460:intron 25.0%
! GATAATGCATAAAATATGCA+AGG - chr1_1:38310868-38310887 None:intergenic 25.0%
! TCACGAGAACATAATAATAA+GGG + chr1_1:38310907-38310926 Msa0021460:intron 25.0%
! GTGTGTATTTAATGTATTGA+AGG - chr1_1:38311026-38311045 None:intergenic 25.0%
!! ATTTTGTAACATCCATTTCA+TGG - chr1_1:38311256-38311275 None:intergenic 25.0%
!! GCTTAAGTGATTTTTCTTTA+GGG - chr1_1:38311403-38311422 None:intergenic 25.0%
!! AGCTTAAGTGATTTTTCTTT+AGG - chr1_1:38311404-38311423 None:intergenic 25.0%
! AATATCAATCATCACATTCT+TGG + chr1_1:38311550-38311569 Msa0021460:CDS 25.0%
! CTAAGCTCATATAATTCTTT+AGG - chr1_1:38311686-38311705 None:intergenic 25.0%
! AGAATTATATGAGCTTAGTT+TGG + chr1_1:38311688-38311707 Msa0021460:CDS 25.0%
!!! CTTGATCATTTGATTTTACA+AGG + chr1_1:38311792-38311811 Msa0021460:intron 25.0%
! AACACTCTTTCAAAAACTAT+AGG + chr1_1:38311815-38311834 Msa0021460:intron 25.0%
! ACACTCTTTCAAAAACTATA+GGG + chr1_1:38311816-38311835 Msa0021460:intron 25.0%
! TGTTGAAGGAAAAATTTAGA+GGG - chr1_1:38311890-38311909 None:intergenic 25.0%
! ATGTTGAAGGAAAAATTTAG+AGG - chr1_1:38311891-38311910 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr1_1:38312261-38312280 Msa0021460:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr1_1:38312262-38312281 Msa0021460:intron 25.0%
! CGAAAAGTTGACATATTTAT+AGG + chr1_1:38312292-38312311 Msa0021460:intron 25.0%
!!! AAATGGTAGATGTTCTTTTT+TGG - chr1_1:38312475-38312494 None:intergenic 25.0%
! ATTTAGTGTAATCAAGTATC+AGG - chr1_1:38312524-38312543 None:intergenic 25.0%
! GATTATGTAAGTGAAAATCA+TGG - chr1_1:38312969-38312988 None:intergenic 25.0%
!! TGATTACTACTATGCATTTT+TGG + chr1_1:38313408-38313427 Msa0021460:CDS 25.0%
! AAAGTTCAAGACATTTAGTA+TGG - chr1_1:38313434-38313453 None:intergenic 25.0%
GATGGAACTATTGATCTTAA+AGG + chr1_1:38309099-38309118 Msa0021460:CDS 30.0%
AGGTAGATTAAATTGTACTG+TGG - chr1_1:38309253-38309272 None:intergenic 30.0%
AAATGCCAAAATTGTTTGGT+CGG + chr1_1:38309407-38309426 Msa0021460:intron 30.0%
TTGATCATCTTAAGCAAAGT+TGG - chr1_1:38309730-38309749 None:intergenic 30.0%
TTCCAACAATGTCAACAATT+GGG + chr1_1:38309962-38309981 Msa0021460:CDS 30.0%
! GTTTTTATGACTCCCATATT+AGG + chr1_1:38309993-38310012 Msa0021460:CDS 30.0%
! CATTTTCTTATAAAATCGGG+AGG - chr1_1:38310151-38310170 None:intergenic 30.0%
TTAGTTATTACCCTTTATCC+GGG - chr1_1:38310287-38310306 None:intergenic 30.0%
AGTGTGATAGAATTTAGATG+TGG - chr1_1:38310506-38310525 None:intergenic 30.0%
CATGTTAGTCCTTTATTGTT+AGG + chr1_1:38310535-38310554 Msa0021460:intron 30.0%
CTTGCTTAGTATATTGGATA+AGG + chr1_1:38310795-38310814 Msa0021460:intron 30.0%
!!! TAATAAGGGTTTTTTGGTGA+TGG + chr1_1:38310823-38310842 Msa0021460:intron 30.0%
CATAAAATATGCAAGGTCTA+GGG - chr1_1:38310861-38310880 None:intergenic 30.0%
CTCACGAGAACATAATAATA+AGG + chr1_1:38310906-38310925 Msa0021460:intron 30.0%
!!! TATTAGTTTTGGTTATTGGC+AGG + chr1_1:38311175-38311194 Msa0021460:intron 30.0%
!!! ATTAGTTTTGGTTATTGGCA+GGG + chr1_1:38311176-38311195 Msa0021460:intron 30.0%
AATGGATGTTACAAAATGCA+AGG + chr1_1:38311259-38311278 Msa0021460:CDS 30.0%
AGTGTATGTACAAGATAATG+TGG + chr1_1:38311487-38311506 Msa0021460:CDS 30.0%
GTGTATGTACAAGATAATGT+GGG + chr1_1:38311488-38311507 Msa0021460:CDS 30.0%
!! TATAATTCTTTAGGGTCATC+AGG - chr1_1:38311677-38311696 None:intergenic 30.0%
! TTGGAAGAGTATACAAAGAA+AGG + chr1_1:38311707-38311726 Msa0021460:CDS 30.0%
ATACAAAGAAAGGCAAATTC+AGG + chr1_1:38311717-38311736 Msa0021460:CDS 30.0%
TGATCAAGTAAAAGTGAGTA+CGG - chr1_1:38311780-38311799 None:intergenic 30.0%
TTATAGGGACTAAATGTTGA+AGG - chr1_1:38311904-38311923 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr1_1:38312248-38312267 Msa0021460:intron 30.0%
! TGTCACGTCACTTTAATATA+CGG + chr1_1:38312374-38312393 Msa0021460:intron 30.0%
! GATTAAGCTAAGGATTTGTT+TGG - chr1_1:38312804-38312823 None:intergenic 30.0%
TAAATGTAGCAACCCAAATA+GGG - chr1_1:38312826-38312845 None:intergenic 30.0%
ATAAATGTAGCAACCCAAAT+AGG - chr1_1:38312827-38312846 None:intergenic 30.0%
! AATACCCTTTTCATAAAGCA+AGG + chr1_1:38312872-38312891 Msa0021460:CDS 30.0%
TGTTCCTTGCTTTATGAAAA+GGG - chr1_1:38312879-38312898 None:intergenic 30.0%
TTGTTCCTTGCTTTATGAAA+AGG - chr1_1:38312880-38312899 None:intergenic 30.0%
TTCTTCAAAGAATGAGTGTA+GGG + chr1_1:38313050-38313069 Msa0021460:CDS 30.0%
AAGTCTATGTCTTTCAATCA+TGG - chr1_1:38313110-38313129 None:intergenic 30.0%
!!! CAATGGAACTTCATGTTTTT+TGG - chr1_1:38313140-38313159 None:intergenic 30.0%
AGCAAAATGAATATGCTCAA+TGG - chr1_1:38313157-38313176 None:intergenic 30.0%
CTTCCACAATTTATCCTTAT+GGG + chr1_1:38313175-38313194 Msa0021460:CDS 30.0%
TTAATGAGTATGATGTTCCA+AGG - chr1_1:38313273-38313292 None:intergenic 30.0%
TCATACTCATTAACTACTAC+TGG + chr1_1:38313280-38313299 Msa0021460:CDS 30.0%
TCATTAACTACTACTGGAAT+TGG + chr1_1:38313286-38313305 Msa0021460:CDS 30.0%
! TCTAACTCTCTAAAAGTTCT+TGG + chr1_1:38313502-38313521 Msa0021460:CDS 30.0%
TATACTACATCTTTGATGAG+TGG + chr1_1:38313585-38313604 Msa0021460:three_prime_UTR 30.0%
GGAAATGAGTACACAAAAGA+TGG + chr1_1:38309081-38309100 Msa0021460:CDS 35.0%
! AAAGCTTGCTCATTTCTTGT+TGG + chr1_1:38309156-38309175 Msa0021460:CDS 35.0%
TTTCTCTCTCACACACTTTA+TGG + chr1_1:38309184-38309203 Msa0021460:intron 35.0%
!!! GCATTTTTTTCGGTTGAGTT+AGG - chr1_1:38309393-38309412 None:intergenic 35.0%
! TATGACCGACCAAACAATTT+TGG - chr1_1:38309415-38309434 None:intergenic 35.0%
AAACCTTAAGGAGACATTTG+AGG + chr1_1:38309533-38309552 Msa0021460:intron 35.0%
TTAAGGAGACATTTGAGGAT+GGG + chr1_1:38309538-38309557 Msa0021460:intron 35.0%
ATGATCAAAGCATGCTCATT+AGG + chr1_1:38309742-38309761 Msa0021460:intron 35.0%
CTTCCAACAATGTCAACAAT+TGG + chr1_1:38309961-38309980 Msa0021460:CDS 35.0%
AACCCAATTGTTGACATTGT+TGG - chr1_1:38309967-38309986 None:intergenic 35.0%
AACAATGTCAACAATTGGGT+TGG + chr1_1:38309966-38309985 Msa0021460:CDS 35.0%
GCAATGTAAGCACCTAATAT+GGG - chr1_1:38310008-38310027 None:intergenic 35.0%
AGCAATGTAAGCACCTAATA+TGG - chr1_1:38310009-38310028 None:intergenic 35.0%
GCATAAAATATGCAAGGTCT+AGG - chr1_1:38310862-38310881 None:intergenic 35.0%
!! TTTTGCTAACGAGTGTTGTA+AGG + chr1_1:38310930-38310949 Msa0021460:intron 35.0%
ACATCCATTTCATGGCATTT+AGG - chr1_1:38311248-38311267 None:intergenic 35.0%
GAACACAAATAGTGTTTGTG+TGG - chr1_1:38311291-38311310 None:intergenic 35.0%
AATGGTTGAAATGTTGGGTT+TGG - chr1_1:38311354-38311373 None:intergenic 35.0%
AAACCCAACATTTCAACCAT+TGG + chr1_1:38311353-38311372 Msa0021460:CDS 35.0%
TTAAGCTCTCATTCTTCAAC+TGG + chr1_1:38311417-38311436 Msa0021460:CDS 35.0%
ATGTACAAGATAATGTGGGT+TGG + chr1_1:38311492-38311511 Msa0021460:CDS 35.0%
TCCATTTATTAGCATGGCTA+AGG + chr1_1:38311613-38311632 Msa0021460:CDS 35.0%
ACCTTAGCCATGCTAATAAA+TGG - chr1_1:38311617-38311636 None:intergenic 35.0%
TGACAAACATGAGTTTCACT+CGG - chr1_1:38312359-38312378 None:intergenic 35.0%
! AGAACATCTACCATTTTGCT+TGG + chr1_1:38312479-38312498 Msa0021460:intron 35.0%
! TCTTGTTTGTATACATGTGC+AGG + chr1_1:38312696-38312715 Msa0021460:intron 35.0%
GTTCAAGTACTAGTAACGAA+TGG + chr1_1:38312747-38312766 Msa0021460:CDS 35.0%
ATGCACAATAACACAAGTAG+AGG + chr1_1:38312775-38312794 Msa0021460:CDS 35.0%
TCCTTAGCTTAATCCCTATT+TGG + chr1_1:38312810-38312829 Msa0021460:CDS 35.0%
CCTTAGCTTAATCCCTATTT+GGG + chr1_1:38312811-38312830 Msa0021460:CDS 35.0%
ATTTGAGCAATCATTGCACT+TGG - chr1_1:38312851-38312870 None:intergenic 35.0%
!! AGGAATTTTTAAGCTGCCAA+GGG - chr1_1:38312915-38312934 None:intergenic 35.0%
!! TGTAATACCTCTAGGATTCT+TGG - chr1_1:38313029-38313048 None:intergenic 35.0%
! TGAAGAAGTGTAATACCTCT+AGG - chr1_1:38313037-38313056 None:intergenic 35.0%
CTTCTTCAAAGAATGAGTGT+AGG + chr1_1:38313049-38313068 Msa0021460:CDS 35.0%
CAACTGTCATTATCACTATG+TGG - chr1_1:38313084-38313103 None:intergenic 35.0%
TGAAAGACATAGACTTAGTG+TGG + chr1_1:38313114-38313133 Msa0021460:CDS 35.0%
GCTTCCACAATTTATCCTTA+TGG + chr1_1:38313174-38313193 Msa0021460:CDS 35.0%
ACTCCCATAAGGATAAATTG+TGG - chr1_1:38313181-38313200 None:intergenic 35.0%
ACAATTTATCCTTATGGGAG+TGG + chr1_1:38313180-38313199 Msa0021460:CDS 35.0%
CTTGAACTTTGTCTTCTTTG+TGG + chr1_1:38313444-38313463 Msa0021460:CDS 35.0%
AAACTTACAGAGAAGAAAGC+AGG + chr1_1:38313529-38313548 Msa0021460:CDS 35.0%
GTTTCTGATTTCCGATCAAT+TGG - chr1_1:38313557-38313576 None:intergenic 35.0%
!! TTTTTCGGTTGAGTTAGGAC+AGG - chr1_1:38309388-38309407 None:intergenic 40.0%
CATCCTCAAATGTCTCCTTA+AGG - chr1_1:38309539-38309558 None:intergenic 40.0%
CTTAAGGAGACATTTGAGGA+TGG + chr1_1:38309537-38309556 Msa0021460:intron 40.0%
TTCATGTCTACTGCAGTGTA+TGG + chr1_1:38309852-38309871 Msa0021460:intron 40.0%
TCATGTCTACTGCAGTGTAT+GGG + chr1_1:38309853-38309872 Msa0021460:intron 40.0%
TTGACAAAGAAGCTTCACCA+AGG + chr1_1:38309927-38309946 Msa0021460:CDS 40.0%
TACATTGCTGATGCTCATCT+TGG + chr1_1:38310020-38310039 Msa0021460:CDS 40.0%
TCGTCGAACTCAGGATTATA+AGG - chr1_1:38310176-38310195 None:intergenic 40.0%
TATTGAAACGCCTAAGCCAA+TGG + chr1_1:38310251-38310270 Msa0021460:intron 40.0%
!!! AAGGGTTTTTTGGTGATGGT+CGG + chr1_1:38310827-38310846 Msa0021460:intron 40.0%
TCCATTTCATGGCATTTAGG+TGG - chr1_1:38311245-38311264 None:intergenic 40.0%
GCACCAATGGTTGAAATGTT+GGG - chr1_1:38311359-38311378 None:intergenic 40.0%
AGCACCAATGGTTGAAATGT+TGG - chr1_1:38311360-38311379 None:intergenic 40.0%
TAGGGTCAAAATCGTCAAAC+TGG - chr1_1:38311385-38311404 None:intergenic 40.0%
TGGATGTCTTGCATTGTCTT+TGG + chr1_1:38311440-38311459 Msa0021460:CDS 40.0%
GGATGTCTTGCATTGTCTTT+GGG + chr1_1:38311441-38311460 Msa0021460:CDS 40.0%
GATATTGCAAGTCCAAGAGT+TGG - chr1_1:38311536-38311555 None:intergenic 40.0%
TCAATCATCACATTCTTGGC+AGG + chr1_1:38311554-38311573 Msa0021460:CDS 40.0%
AGGGAGTCCATTTATTAGCA+TGG + chr1_1:38311607-38311626 Msa0021460:CDS 40.0%
CAAGTAAAAGTGAGTACGGT+AGG - chr1_1:38311776-38311795 None:intergenic 40.0%
!! ATGTCCCACTATTTTGGGAA+TGG - chr1_1:38312401-38312420 None:intergenic 40.0%
! CATGCATGTCCCACTATTTT+GGG - chr1_1:38312406-38312425 None:intergenic 40.0%
! TCATGCATGTCCCACTATTT+TGG - chr1_1:38312407-38312426 None:intergenic 40.0%
! ACGTTTTCGACCAAGCAAAA+TGG - chr1_1:38312492-38312511 None:intergenic 40.0%
CCCAAATAGGGATTAAGCTA+AGG - chr1_1:38312814-38312833 None:intergenic 40.0%
ACAACTCTTAACAGATCCCT+TGG + chr1_1:38312896-38312915 Msa0021460:CDS 40.0%
!! GAGGAATTTTTAAGCTGCCA+AGG - chr1_1:38312916-38312935 None:intergenic 40.0%
GTACATGCAGTTAAACTTGC+TGG - chr1_1:38312938-38312957 None:intergenic 40.0%
AAGTTGACCAAGAATCCTAG+AGG + chr1_1:38313019-38313038 Msa0021460:CDS 40.0%
!! ACTTTTGGAGGGTGCAAAAA+TGG + chr1_1:38313210-38313229 Msa0021460:CDS 40.0%
TCACATGTCACTGAGAAACA+TGG + chr1_1:38313343-38313362 Msa0021460:CDS 40.0%
!! AGCTCTGGAAACATAGAACT+TGG - chr1_1:38313476-38313495 None:intergenic 40.0%
AGAGTTAGAAACTTCAGCTC+TGG - chr1_1:38313491-38313510 None:intergenic 40.0%
GAAAGCAGGTACCAATTGAT+CGG + chr1_1:38313543-38313562 Msa0021460:exon 40.0%
ACTACATCTTTGATGAGTGG+CGG + chr1_1:38313588-38313607 Msa0021460:three_prime_UTR 40.0%
TCTGTTCTCAGATCCAAGAC+AGG + chr1_1:38309126-38309145 Msa0021460:CDS 45.0%
ATGCTCATCTTGGACGCTAT+TGG + chr1_1:38310030-38310049 Msa0021460:CDS 45.0%
TAATCCTGAGTTCGACGATG+AGG + chr1_1:38310178-38310197 Msa0021460:intron 45.0%
TTTACCTCATCGTCGAACTC+AGG - chr1_1:38310185-38310204 None:intergenic 45.0%
! TGAGAGAATGGGGAGTACAA+AGG + chr1_1:38310695-38310714 Msa0021460:intron 45.0%
!!! AGGGTTTTTTGGTGATGGTC+GGG + chr1_1:38310828-38310847 Msa0021460:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr1_1:38310890-38310909 None:intergenic 45.0%
!! CATTTAGGTGGCTTTAGGCT+TGG - chr1_1:38311233-38311252 None:intergenic 45.0%
CATGGCATTTAGGTGGCTTT+AGG - chr1_1:38311238-38311257 None:intergenic 45.0%
GCCACCTAAATGCCATGAAA+TGG + chr1_1:38311241-38311260 Msa0021460:CDS 45.0%
TGCCCTCTACATTATAGCAG+CGG + chr1_1:38311316-38311335 Msa0021460:CDS 45.0%
TCCCGCTGCTATAATGTAGA+GGG - chr1_1:38311321-38311340 None:intergenic 45.0%
TTCCCGCTGCTATAATGTAG+AGG - chr1_1:38311322-38311341 None:intergenic 45.0%
TACATTATAGCAGCGGGAAC+AGG + chr1_1:38311323-38311342 Msa0021460:CDS 45.0%
AGCTCTCATTCTTCAACTGG+TGG + chr1_1:38311420-38311439 Msa0021460:CDS 45.0%
!! GATAATGTGGGTTGGACTCT+TGG + chr1_1:38311500-38311519 Msa0021460:CDS 45.0%
GGATATGCTCTTCCAACTCT+TGG + chr1_1:38311521-38311540 Msa0021460:CDS 45.0%
TAGCATGGCTAAGGTCATTG+TGG + chr1_1:38311622-38311641 Msa0021460:CDS 45.0%
AGGTCATTGTGGCAGCTATA+AGG + chr1_1:38311633-38311652 Msa0021460:CDS 45.0%
ACGGTCCATTCCCAAAATAG+TGG + chr1_1:38312393-38312412 Msa0021460:intron 45.0%
CGGTCCATTCCCAAAATAGT+GGG + chr1_1:38312394-38312413 Msa0021460:intron 45.0%
GTTAGTGTCAATGCCGTTCT+CGG + chr1_1:38312580-38312599 Msa0021460:intron 45.0%
ACTAACACGAACACCGAGAA+CGG - chr1_1:38312596-38312615 None:intergenic 45.0%
CATGTGCAGGTTCCTTAACA+AGG + chr1_1:38312709-38312728 Msa0021460:intron 45.0%
GTTCCTTAACAAGGCATGTG+TGG + chr1_1:38312718-38312737 Msa0021460:CDS 45.0%
! TGTCCACACATGCCTTGTTA+AGG - chr1_1:38312724-38312743 None:intergenic 45.0%
!! CATGCAGTTAAACTTGCTGG+AGG - chr1_1:38312935-38312954 None:intergenic 45.0%
CATGTCACTGAGAAACATGG+TGG + chr1_1:38313346-38313365 Msa0021460:CDS 45.0%
!! TAATATCTAATAAAATATAA+TGG + chr1_1:38309622-38309641 Msa0021460:intron 5.0%
!!! TTTTTTTTTTTTTTTTTGAA+AGG - chr1_1:38310769-38310788 None:intergenic 5.0%
!! AAACTAATAAATTATTATAA+AGG - chr1_1:38311164-38311183 None:intergenic 5.0%
!!! TTATAATAATTTATTAGTTT+TGG + chr1_1:38311164-38311183 Msa0021460:intron 5.0%
!! CAAAAATTAAATTAAAAATA+GGG - chr1_1:38311950-38311969 None:intergenic 5.0%
!! ACAAAAATTAAATTAAAAAT+AGG - chr1_1:38311951-38311970 None:intergenic 5.0%
!!! ATGATTTTTTATATTTTTTA+CGG - chr1_1:38312078-38312097 None:intergenic 5.0%
GTTCTCAGATCCAAGACAGG+TGG + chr1_1:38309129-38309148 Msa0021460:CDS 50.0%
TCAGATCCAAGACAGGTGGT+TGG + chr1_1:38309133-38309152 Msa0021460:CDS 50.0%
AGCTTTCCAACCACCTGTCT+TGG - chr1_1:38309142-38309161 None:intergenic 50.0%
CGGTCATATCGATATGACCG+TGG + chr1_1:38309427-38309446 Msa0021460:intron 50.0%
TGGAAGAGATGACAGTGCCT+TGG - chr1_1:38309947-38309966 None:intergenic 50.0%
AACGCCTAAGCCAATGGAGA+AGG + chr1_1:38310257-38310276 Msa0021460:intron 50.0%
!!! GGGTTTTTTGGTGATGGTCG+GGG + chr1_1:38310829-38310848 Msa0021460:intron 50.0%
TCTCGTGAGCTTAGCTCAGT+TGG - chr1_1:38310895-38310914 None:intergenic 50.0%
!! AGGTGGCTTTAGGCTTGGTA+GGG - chr1_1:38311228-38311247 None:intergenic 50.0%
!! TAGGTGGCTTTAGGCTTGGT+AGG - chr1_1:38311229-38311248 None:intergenic 50.0%
GCCCTCTACATTATAGCAGC+GGG + chr1_1:38311317-38311336 Msa0021460:CDS 50.0%
ATTATAGCAGCGGGAACAGG+TGG + chr1_1:38311326-38311345 Msa0021460:CDS 50.0%
TTATAGCAGCGGGAACAGGT+GGG + chr1_1:38311327-38311346 Msa0021460:CDS 50.0%
GTCAAACTGGTCAGCACCAA+TGG - chr1_1:38311372-38311391 None:intergenic 50.0%
AACAAGGCATGTGTGGACAC+TGG + chr1_1:38312725-38312744 Msa0021460:CDS 50.0%
!! AGTGGCTGAAGCACTTTTGG+AGG + chr1_1:38313198-38313217 Msa0021460:CDS 50.0%
!! GTGGCTGAAGCACTTTTGGA+GGG + chr1_1:38313199-38313218 Msa0021460:CDS 50.0%
CCAAGGCTCTTCATGCTTTC+TGG - chr1_1:38313256-38313275 None:intergenic 50.0%
! CCAGAAAGCATGAAGAGCCT+TGG + chr1_1:38313253-38313272 Msa0021460:CDS 50.0%
ACTGAGAAACATGGTGGTCG+AGG + chr1_1:38313352-38313371 Msa0021460:CDS 50.0%
CTGAGAAACATGGTGGTCGA+GGG + chr1_1:38313353-38313372 Msa0021460:CDS 50.0%
!! CACGCCTTCTCCATTGGCTT+AGG - chr1_1:38310264-38310283 None:intergenic 55.0%
! AGAAGGCGTGCCCGGATAAA+GGG + chr1_1:38310274-38310293 Msa0021460:intron 55.0%
GTGCTTCAGCCACTCCCATA+AGG - chr1_1:38313192-38313211 None:intergenic 55.0%
!! GGGAGTGGCTGAAGCACTTT+TGG + chr1_1:38313195-38313214 Msa0021460:CDS 55.0%
AGAAACATGGTGGTCGAGGG+TGG + chr1_1:38313356-38313375 Msa0021460:CDS 55.0%
! TCTTTGATGAGTGGCGGAGC+TGG + chr1_1:38313594-38313613 Msa0021460:three_prime_UTR 55.0%
! GAGAAGGCGTGCCCGGATAA+AGG + chr1_1:38310273-38310292 Msa0021460:intron 60.0%
! TGATGAGTGGCGGAGCTGGA+CGG + chr1_1:38313598-38313617 Msa0021460:three_prime_UTR 60.0%
! GCCAATGGAGAAGGCGTGCC+CGG + chr1_1:38310266-38310285 Msa0021460:intron 65.0%
TCCGGGCACGCCTTCTCCAT+TGG - chr1_1:38310270-38310289 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 38309063 38313628 38309063 ID=Msa0021460;Name=Msa0021460
chr1_1 mRNA 38309063 38313628 38309063 ID=Msa0021460-mRNA-1;Parent=Msa0021460;Name=Msa0021460-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.5|1|1|1|4|67|580
chr1_1 exon 38309063 38309177 38309063 ID=Msa0021460-mRNA-1:exon:11866;Parent=Msa0021460-mRNA-1
chr1_1 exon 38309868 38310085 38309868 ID=Msa0021460-mRNA-1:exon:11867;Parent=Msa0021460-mRNA-1
chr1_1 exon 38311197 38311762 38311197 ID=Msa0021460-mRNA-1:exon:11868;Parent=Msa0021460-mRNA-1
chr1_1 exon 38312718 38313628 38312718 ID=Msa0021460-mRNA-1:exon:11869;Parent=Msa0021460-mRNA-1
chr1_1 CDS 38309063 38309177 38309063 ID=Msa0021460-mRNA-1:cds;Parent=Msa0021460-mRNA-1
chr1_1 CDS 38309868 38310085 38309868 ID=Msa0021460-mRNA-1:cds;Parent=Msa0021460-mRNA-1
chr1_1 CDS 38311197 38311762 38311197 ID=Msa0021460-mRNA-1:cds;Parent=Msa0021460-mRNA-1
chr1_1 CDS 38312718 38313561 38312718 ID=Msa0021460-mRNA-1:cds;Parent=Msa0021460-mRNA-1
chr1_1 three_prime_UTR 38313562 38313628 38313562 ID=Msa0021460-mRNA-1:three_prime_utr;Parent=Msa0021460-mRNA-1
Gene Sequence

>Msa0021460

ATGGAAGAAGGCATGATTGGAAATGAGTACACAAAAGATGGAACTATTGATCTTAAAGGAAAATCTGTTCTCAGATCCAAGACAGGTGGTTGGAAAGCTTGCTCATTTCTTGTTGTGTATGGGATATTTGAAAGAATTGCTTATTTTGGAATATCATCAAATTTGTTTGTGTATTTGACAAAGAAGCTTCACCAAGGCACTGTCATCTCTTCCAACAATGTCAACAATTGGGTTGGCACTGTTTTTATGACTCCCATATTAGGTGCTTACATTGCTGATGCTCATCTTGGACGCTATTGGACTTTTGTCATTTCTGCCTTTGTTTATTTATCGGGTATGTGTCTACTTACACTATCTGTTTCCCTACCAAGCCTAAAGCCACCTAAATGCCATGAAATGGATGTTACAAAATGCAAGGAAGCTTCCACACAAACACTATTTGTGTTCTACACTGCCCTCTACATTATAGCAGCGGGAACAGGTGGGACCAAACCCAACATTTCAACCATTGGTGCTGACCAGTTTGACGATTTTGACCCTAAAGAAAAATCACTTAAGCTCTCATTCTTCAACTGGTGGATGTCTTGCATTGTCTTTGGGTCATTATTTGCATTCACAGTTATAGTGTATGTACAAGATAATGTGGGTTGGACTCTTGGATATGCTCTTCCAACTCTTGGACTTGCAATATCAATCATCACATTCTTGGCAGGCACACCTTTTTATAGACACAAATTGATTAAAGGGAGTCCATTTATTAGCATGGCTAAGGTCATTGTGGCAGCTATAAGGAAATTTGATGTAGTTGTTCCTGATGACCCTAAAGAATTATATGAGCTTAGTTTGGAAGAGTATACAAAGAAAGGCAAATTCAGGATTGATCTCACTCAAACATTCAAGTTCCTTAACAAGGCATGTGTGGACACTGGTTCAAGTACTAGTAACGAATGGATGTTATGCACAATAACACAAGTAGAGGAAACCAAACAAATCCTTAGCTTAATCCCTATTTGGGTTGCTACATTTATTCCAAGTGCAATGATTGCTCAAATAAATACCCTTTTCATAAAGCAAGGAACAACTCTTAACAGATCCCTTGGCAGCTTAAAAATTCCTCCAGCAAGTTTAACTGCATGTACAGTTTTGACCATGATTTTCACTTACATAATCTATGAAAGATTCATTGTCAAGATTATGCAAAAGTTGACCAAGAATCCTAGAGGTATTACACTTCTTCAAAGAATGAGTGTAGGGTTCATAATCCACATAGTGATAATGACAGTTGCATCCATGATTGAAAGACATAGACTTAGTGTGGCCAAAAAACATGAAGTTCCATTGAGCATATTCATTTTGCTTCCACAATTTATCCTTATGGGAGTGGCTGAAGCACTTTTGGAGGGTGCAAAAATGGAGTTTTTCTATGATCAAGCACCAGAAAGCATGAAGAGCCTTGGAACATCATACTCATTAACTACTACTGGAATTGGTAGTTTTCTCAGCACTTTTCTTCTTTCAACAGTTTCACATGTCACTGAGAAACATGGTGGTCGAGGGTGGATTTTGAATAACTTGAATGCTTCTCATCTTGATTACTACTATGCATTTTTGGCCATACTAAATGTCTTGAACTTTGTCTTCTTTGTGGTTGTTTCCAAGTTCTATGTTTCCAGAGCTGAAGTTTCTAACTCTCTAAAAGTTCTTGGAACAAAACTTACAGAGAAGAAAGCAGGTACCAATTGA
Protein sequence

>Msa0021460

MEEGMIGNEYTKDGTIDLKGKSVLRSKTGGWKACSFLVVYGIFERIAYFGISSNLFVYLTKKLHQGTVISSNNVNNWVGTVFMTPILGAYIADAHLGRYWTFVISAFVYLSGMCLLTLSVSLPSLKPPKCHEMDVTKCKEASTQTLFVFYTALYIIAAGTGGTKPNISTIGADQFDDFDPKEKSLKLSFFNWWMSCIVFGSLFAFTVIVYVQDNVGWTLGYALPTLGLAISIITFLAGTPFYRHKLIKGSPFISMAKVIVAAIRKFDVVVPDDPKELYELSLEEYTKKGKFRIDLTQTFKFLNKACVDTGSSTSNEWMLCTITQVEETKQILSLIPIWVATFIPSAMIAQINTLFIKQGTTLNRSLGSLKIPPASLTACTVLTMIFTYIIYERFIVKIMQKLTKNPRGITLLQRMSVGFIIHIVIMTVASMIERHRLSVAKKHEVPLSIFILLPQFILMGVAEALLEGAKMEFFYDQAPESMKSLGTSYSLTTTGIGSFLSTFLLSTVSHVTEKHGGRGWILNNLNASHLDYYYAFLAILNVLNFVFFVVVSKFYVSRAEVSNSLKVLGTKLTEKKAGTN*