AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0859180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0859180 MtrunA17_Chr5g0437971 99.180 366 3 0 1 366 1 366 0.0 732
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0859180 AT2G40430.1 54.217 249 105 5 1 248 1 241 1.52e-70 227
Msa0859180 AT2G40430.1 53.704 162 74 1 199 360 275 435 5.34e-41 149
Msa0859180 AT2G40430.2 54.217 249 105 5 1 248 1 241 1.90e-70 227
Msa0859180 AT2G40430.2 53.704 162 74 1 199 360 275 435 5.32e-41 150
Msa0859180 AT2G40430.3 53.704 162 74 1 199 360 126 286 2.86e-42 149
Msa0859180 AT2G40430.3 73.563 87 23 0 1 87 1 87 5.72e-35 130

Find 82 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAAAAGACGCTCTTTC+TGG 0.212843 5_4:-57355147 Msa0859180:CDS
AAAAGTGTAGTGTACGAAAA+TGG 0.221576 5_4:-57355256 Msa0859180:exon
ACAGTTAAAGGCACCGGTTC+AGG 0.249592 5_4:+57352873 None:intergenic
TTCATTGGCGACTAAACTTT+TGG 0.280238 5_4:+57353592 None:intergenic
TAAAGTCTACAGAAATGAAT+TGG 0.292665 5_4:-57352898 Msa0859180:CDS
TCTCCAGCAGGAACAGTTAA+AGG 0.308159 5_4:+57352861 None:intergenic
CATTAGCGGCAGAGTGAAAC+AGG 0.313994 5_4:+57355315 None:intergenic
TTATTAAGCGAAGAGATAAA+TGG 0.314835 5_4:-57351680 Msa0859180:CDS
AAGTCGCTCCGCATGATATA+TGG 0.329886 5_4:-57350841 Msa0859180:three_prime_UTR
AAAGTGTAGTGTACGAAAAT+GGG 0.340852 5_4:-57355255 Msa0859180:exon
AACCTGTTTCTCCTGGGCTT+TGG 0.342084 5_4:+57351460 None:intergenic
CATGCGGAGCGACTTAAGTT+AGG 0.360113 5_4:+57350849 None:intergenic
ATTCTTCTTCTTCTTTGATT+CGG 0.360872 5_4:+57352096 None:intergenic
ACAAGTCTACCTTAAGCTTT+CGG 0.364930 5_4:+57351651 None:intergenic
AGGCAACAAGAAAGTGAAAA+AGG 0.370426 5_4:-57353247 Msa0859180:intron
TTTGATATGTGGGGTGATAA+AGG 0.381349 5_4:-57353367 Msa0859180:intron
TTCCAAAGCCCAGGAGAAAC+AGG 0.387383 5_4:-57351462 Msa0859180:intron
ATTTCTCAAAAGAAATTGAT+AGG 0.389918 5_4:-57352075 Msa0859180:intron
TCGCTTAATAAAACTTGAAC+AGG 0.391740 5_4:+57351692 None:intergenic
TGCTAAACAAGAGAGGTTAA+AGG 0.397687 5_4:-57351890 Msa0859180:CDS
TTGAGTTGAATAAGAGAATT+CGG 0.399925 5_4:-57352144 Msa0859180:CDS
TGGATCCATCCGAAAGCTTA+AGG 0.404582 5_4:-57351660 Msa0859180:intron
CGGCAGAGTGAAACAGGGTT+TGG 0.411297 5_4:+57355321 None:intergenic
TTAAACCAACCTGTTTCTCC+TGG 0.418166 5_4:+57351453 None:intergenic
AAATGAATTGGGCCCTGAAC+CGG 0.418925 5_4:-57352886 Msa0859180:CDS
ATTCTGACGTATTTGATATG+TGG 0.431247 5_4:-57353378 Msa0859180:CDS
AAGGCACTGGCTTAACAAAC+TGG 0.432795 5_4:+57353657 None:intergenic
TTGTTTACCTGTGCACTTCG+AGG 0.464943 5_4:-57350586 None:intergenic
CGCCAATGAAAATATTCATA+AGG 0.466327 5_4:-57353579 Msa0859180:intron
GGAGGATCAACCTCGACAGC+TGG 0.470903 5_4:+57353091 None:intergenic
GGGTTGTTGCACCCTTCTAA+AGG 0.473919 5_4:-57351521 Msa0859180:CDS
AAAGTCTACAGAAATGAATT+GGG 0.481927 5_4:-57352897 Msa0859180:CDS
GAAATGATTAACAAAGATCC+TGG 0.482793 5_4:-57350614 Msa0859180:three_prime_UTR
TAAACCAACCTGTTTCTCCT+GGG 0.484368 5_4:+57351454 None:intergenic
TCAGAAATAGCTTCTCCAGC+AGG 0.486553 5_4:+57352849 None:intergenic
AAGGCATGTCCTCCTCGCTT+AGG 0.491146 5_4:-57351871 Msa0859180:CDS
TTCTTACCCTCGAAGTGCAC+AGG 0.493479 5_4:+57350579 None:intergenic
TCCCACACATGAAAGTCATC+AGG 0.503208 5_4:-57353053 Msa0859180:intron
CAGTTAAAGGCACCGGTTCA+GGG 0.505603 5_4:+57352874 None:intergenic
GGAAGAAATCGAAAAGTTCA+AGG 0.508630 5_4:-57355233 Msa0859180:CDS
TATAAAAGCATAGAGAAGAG+AGG 0.512651 5_4:-57351493 Msa0859180:CDS
GTGCCTTTAACTGTTCCTGC+TGG 0.514168 5_4:-57352864 Msa0859180:CDS
AATAAAACTTGAACAGGAGC+AGG 0.514471 5_4:+57351698 None:intergenic
TTCTGACGTATTTGATATGT+GGG 0.515220 5_4:-57353377 Msa0859180:CDS
AAGCATAGAGAAGAGAGGGT+TGG 0.525558 5_4:-57351488 Msa0859180:CDS
TGTTTACCTGTGCACTTCGA+GGG 0.527913 5_4:-57350585 None:intergenic
GGTTGGTTGTTCCAAAGCCC+AGG 0.531435 5_4:-57351471 Msa0859180:CDS
GGAAATTAAGCATGAAGATG+AGG 0.531668 5_4:-57351944 Msa0859180:CDS
GAAATCGAAAAGTTCAAGGA+AGG 0.532332 5_4:-57355229 Msa0859180:CDS
TGTCATGCAGACGCAGATGA+AGG 0.540396 5_4:-57353267 Msa0859180:intron
TGTTTCTTTAGAGTAGATGA+AGG 0.544003 5_4:+57353638 None:intergenic
TACTTGTGCTTTCCTAAGCG+AGG 0.545713 5_4:+57351859 None:intergenic
GTCTACCTTAAGCTTTCGGA+TGG 0.547767 5_4:+57351655 None:intergenic
TTTAGAGTAGATGAAGGCAC+TGG 0.552068 5_4:+57353644 None:intergenic
ACCTGATGACTTTCATGTGT+GGG 0.552896 5_4:+57353052 None:intergenic
TACATTAGCTACTGCTGTTG+CGG 0.553793 5_4:-57352931 Msa0859180:CDS
ATGCGGAGCGACTTAAGTTA+GGG 0.555122 5_4:+57350850 None:intergenic
CAAGGAAGGGTAAGAAAGCA+TGG 0.557013 5_4:-57355215 Msa0859180:CDS
GCTGTCGAGGTTGATCCTCC+AGG 0.559631 5_4:-57353088 Msa0859180:CDS
TTTATACCGATCCTTTAGAA+GGG 0.578806 5_4:+57351510 None:intergenic
TACTCATATTCCAGCTGTCG+AGG 0.579607 5_4:-57353101 Msa0859180:CDS
ATAAAAGCATAGAGAAGAGA+GGG 0.580504 5_4:-57351492 Msa0859180:CDS
TTTGATGTGGCTAGATCTTG+CGG 0.583564 5_4:-57353744 Msa0859180:intron
GTTGCACCCTTCTAAAGGAT+CGG 0.583877 5_4:-57351516 Msa0859180:CDS
GCAGGAACAGTTAAAGGCAC+CGG 0.584872 5_4:+57352867 None:intergenic
AAGTGTAGTGTACGAAAATG+GGG 0.585208 5_4:-57355254 Msa0859180:exon
CACAGGTAAACAAATACTCC+AGG 0.585515 5_4:+57350596 None:intergenic
TATTCAGAACAGAACATTAG+CGG 0.593957 5_4:+57355301 None:intergenic
TTAAGTTAGGGACGAAAACA+AGG 0.597208 5_4:+57350862 None:intergenic
GAAAGTAATCACGAAGATGA+TGG 0.598830 5_4:-57352639 Msa0859180:CDS
TCGACAGCTGGAATATGAGT+AGG 0.600011 5_4:+57353103 None:intergenic
ACAAAAGACGCTCTTTCTGG+TGG 0.605132 5_4:-57355144 Msa0859180:CDS
AAATCGAAAAGTTCAAGGAA+GGG 0.615075 5_4:-57355228 Msa0859180:CDS
GTGGGATTAAATGAGCATCC+TGG 0.637097 5_4:+57353070 None:intergenic
TACCTGATGACTTTCATGTG+TGG 0.645793 5_4:+57353051 None:intergenic
TCTTCTTGCCATATATCATG+CGG 0.653944 5_4:+57350833 None:intergenic
TTGTGCTTTCCTAAGCGAGG+AGG 0.655472 5_4:+57351862 None:intergenic
GACAAGTTGCTAAACAAGAG+AGG 0.673783 5_4:-57351897 Msa0859180:CDS
GGATTAAATGAGCATCCTGG+AGG 0.690842 5_4:+57353073 None:intergenic
ATTAGCGGCAGAGTGAAACA+GGG 0.712186 5_4:+57355316 None:intergenic
AAATACGTCAGAATCTAACA+CGG 0.731068 5_4:+57353387 None:intergenic
TCTGACGTATTTGATATGTG+GGG 0.759234 5_4:-57353376 Msa0859180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CCAAAATAAATAAATAAAAA+TGG + chr5_4:57350852-57350871 None:intergenic 10.0%
!!! CCATTTTTATTTATTTATTT+TGG - chr5_4:57350849-57350868 Msa0859180:three_prime_UTR 10.0%
!!! AATTTATTTTAAATTTGATG+TGG - chr5_4:57352152-57352171 Msa0859180:CDS 10.0%
!!! AATAAAACAAATTTTAAAAG+AGG + chr5_4:57352467-57352486 None:intergenic 10.0%
!! TTAATTTATAATAACCAAAA+TGG + chr5_4:57352592-57352611 None:intergenic 10.0%
!!! TTTTGGTTATTATAAATTAA+TGG - chr5_4:57352592-57352611 Msa0859180:intron 10.0%
!! TTTGGTTATTATAAATTAAT+GGG - chr5_4:57352593-57352612 Msa0859180:intron 10.0%
!!! GTTTTGGATTTTATTAAAAA+TGG - chr5_4:57351381-57351400 Msa0859180:intron 15.0%
!!! TTTATTTTTTAAAAACAAGG+AGG - chr5_4:57351642-57351661 Msa0859180:intron 15.0%
!! TTAAAATAAATTCAAATCCA+AGG + chr5_4:57352144-57352163 None:intergenic 15.0%
!! TTTCTTTAATAATCTATATC+AGG - chr5_4:57352493-57352512 Msa0859180:intron 15.0%
!!! TTTTAGGTGTATAAATTTTA+TGG - chr5_4:57353503-57353522 Msa0859180:intron 15.0%
!! TTACTTACAAATATATTAAG+TGG + chr5_4:57353631-57353650 None:intergenic 15.0%
!!! ATTAGTCTAAAAAAAAAGTA+AGG + chr5_4:57354339-57354358 None:intergenic 15.0%
!!! TTTTTAGTTTTAGGTTTGTT+TGG - chr5_4:57350943-57350962 Msa0859180:intron 20.0%
!!! TCATAAGTTGTTTTAGTTTT+AGG - chr5_4:57351262-57351281 Msa0859180:intron 20.0%
!!! CATAAGTTGTTTTAGTTTTA+GGG - chr5_4:57351263-57351282 Msa0859180:intron 20.0%
!! TAAAAATGGAAAATGTTAAC+CGG - chr5_4:57351395-57351414 Msa0859180:intron 20.0%
!! AAGATTGTGTTAAAAAAATC+TGG + chr5_4:57351753-57351772 None:intergenic 20.0%
!! GAAAACACATCAATTATAAT+AGG + chr5_4:57351960-57351979 None:intergenic 20.0%
!! GTAAAAGTTTATGTAATTCA+TGG + chr5_4:57351982-57352001 None:intergenic 20.0%
!! CTAAATAATAATATGCTTAG+TGG - chr5_4:57352380-57352399 Msa0859180:intron 20.0%
!! TTTAATAATCTATATCAGGA+GGG - chr5_4:57352497-57352516 Msa0859180:intron 20.0%
!! AAATATGGAAACAAATTCAT+AGG + chr5_4:57353136-57353155 None:intergenic 20.0%
!!! TTAAATACTTTCTTTTTTGC+CGG - chr5_4:57353358-57353377 Msa0859180:intron 20.0%
!! ATTTCTCAAAAGAAATTGAT+AGG - chr5_4:57353834-57353853 Msa0859180:intron 20.0%
!!! ACTAATTTTCCTACTTATTT+TGG - chr5_4:57354353-57354372 Msa0859180:intron 20.0%
!!! TTATTTTGGTGTACATAATT+AGG - chr5_4:57354367-57354386 Msa0859180:intron 20.0%
!!! TATTTTGGTGTACATAATTA+GGG - chr5_4:57354368-57354387 Msa0859180:intron 20.0%
!! TTATTATCTCAAAACAGATT+TGG - chr5_4:57354526-57354545 Msa0859180:intron 20.0%
!!! ATCAAATTTTCATATCCTTT+TGG - chr5_4:57354821-57354840 Msa0859180:intron 20.0%
!!! TATTTTGCTTACAATTTCAT+TGG - chr5_4:57355221-57355240 Msa0859180:CDS 20.0%
!!! TTTTCAATTTTCAGGAACAA+GGG + chr5_4:57350636-57350655 None:intergenic 25.0%
!!! TTTTTCAATTTTCAGGAACA+AGG + chr5_4:57350637-57350656 None:intergenic 25.0%
!!! ACTACACTTTTTCAATTTTC+AGG + chr5_4:57350644-57350663 None:intergenic 25.0%
! CAATTACATAAGCTTGTATA+TGG - chr5_4:57350914-57350933 Msa0859180:intron 25.0%
!!! TGGAAAGTGTTTTTAGTTTT+AGG - chr5_4:57350934-57350953 Msa0859180:intron 25.0%
!!! CATTTTTGAAGTGTTTGTTT+TGG - chr5_4:57351365-57351384 Msa0859180:intron 25.0%
! CATTGAAAATTGTGTAATCA+AGG - chr5_4:57351462-57351481 Msa0859180:intron 25.0%
! CTCTATAATGAAAAGCTATT+AGG - chr5_4:57351602-57351621 Msa0859180:intron 25.0%
! AGCTTATGAAAACAACTTAT+AGG - chr5_4:57351833-57351852 Msa0859180:intron 25.0%
! ATTAAGCTGTTTATTCAAAC+AGG - chr5_4:57351909-57351928 Msa0859180:CDS 25.0%
! TTAAGCTGTTTATTCAAACA+GGG - chr5_4:57351910-57351929 Msa0859180:CDS 25.0%
!! ACATAAACTTTTACGAGAAA+TGG - chr5_4:57351988-57352007 Msa0859180:intron 25.0%
! ATCAATGAAAAAGTGAATTC+TGG + chr5_4:57352121-57352140 None:intergenic 25.0%
!! GACCTTATGAATATTTTCAT+TGG + chr5_4:57352335-57352354 None:intergenic 25.0%
! CTTTAATAATCTATATCAGG+AGG - chr5_4:57352496-57352515 Msa0859180:intron 25.0%
!!! AAAGCATTTAGTATCCATTT+TGG - chr5_4:57352575-57352594 Msa0859180:intron 25.0%
! ATTAATGGGATGTTAACATT+AGG - chr5_4:57352607-57352626 Msa0859180:intron 25.0%
! AAGAACTTTATTGTTTAACC+AGG - chr5_4:57352954-57352973 Msa0859180:intron 25.0%
! TAAAGTCTACAGAAATGAAT+TGG - chr5_4:57353011-57353030 Msa0859180:intron 25.0%
! AAAGTCTACAGAAATGAATT+GGG - chr5_4:57353012-57353031 Msa0859180:intron 25.0%
!!! TGTTATTTTTATGACCTGAT+TGG + chr5_4:57353393-57353412 None:intergenic 25.0%
! GCTTTCAAAAAAAAGAATAC+CGG + chr5_4:57353540-57353559 None:intergenic 25.0%
!! CTTAATTTCATTTTGAACAC+TGG - chr5_4:57353596-57353615 Msa0859180:CDS 25.0%
! TCAGATATTTAGACATAACT+GGG + chr5_4:57353683-57353702 None:intergenic 25.0%
! ATCAGATATTTAGACATAAC+TGG + chr5_4:57353684-57353703 None:intergenic 25.0%
! TGTATTGTTTGAATCACTAT+TGG - chr5_4:57353709-57353728 Msa0859180:CDS 25.0%
!!! GTCACTTTCTTTGTTTTAAT+GGG + chr5_4:57353740-57353759 None:intergenic 25.0%
!!! AGTCACTTTCTTTGTTTTAA+TGG + chr5_4:57353741-57353760 None:intergenic 25.0%
!!! TTGAGTTGAATAAGAGAATT+CGG - chr5_4:57353765-57353784 Msa0859180:intron 25.0%
! ATTCTTCTTCTTCTTTGATT+CGG + chr5_4:57353816-57353835 None:intergenic 25.0%
! CATTAATACAAGTACGATAA+GGG + chr5_4:57354093-57354112 None:intergenic 25.0%
! CTTATCGTACTTGTATTAAT+GGG - chr5_4:57354092-57354111 Msa0859180:intron 25.0%
! TAACGTAATTGTTGTAGAAA+TGG + chr5_4:57354160-57354179 None:intergenic 25.0%
! TTATTAAGCGAAGAGATAAA+TGG - chr5_4:57354229-57354248 Msa0859180:intron 25.0%
! TTATGTACACCAAAATAAGT+AGG + chr5_4:57354365-57354384 None:intergenic 25.0%
!! GGATTTTGTAGAAGTTAATT+TGG - chr5_4:57354671-57354690 Msa0859180:intron 25.0%
!! TGAGTTTAAAGTGAAATAGT+TGG - chr5_4:57354701-57354720 Msa0859180:intron 25.0%
!! TGAAATAGTTGGTGTTTAAA+TGG - chr5_4:57354712-57354731 Msa0859180:intron 25.0%
! ATGGTTATATGTTGAAAGTA+TGG - chr5_4:57354731-57354750 Msa0859180:intron 25.0%
!!! TTGAAAGTTTTGACTTGAAA+TGG + chr5_4:57354796-57354815 None:intergenic 25.0%
!! ATTTCAAGTCAAAACTTTCA+AGG - chr5_4:57354795-57354814 Msa0859180:intron 25.0%
!! AGTCTTTGATTTAGAATTTG+AGG - chr5_4:57354897-57354916 Msa0859180:intron 25.0%
! TTGAAATATACAACATGCAA+GGG + chr5_4:57354958-57354977 None:intergenic 25.0%
! ATTGAAATATACAACATGCA+AGG + chr5_4:57354959-57354978 None:intergenic 25.0%
! TTGCATGTTGTATATTTCAA+TGG - chr5_4:57354958-57354977 Msa0859180:intron 25.0%
TATTCAGAACAGAACATTAG+CGG + chr5_4:57350611-57350630 None:intergenic 30.0%
! AAAAGTGTAGTGTACGAAAA+TGG - chr5_4:57350653-57350672 Msa0859180:intron 30.0%
AAAGTGTAGTGTACGAAAAT+GGG - chr5_4:57350654-57350673 Msa0859180:intron 30.0%
AAATCGAAAAGTTCAAGGAA+GGG - chr5_4:57350681-57350700 Msa0859180:three_prime_UTR 30.0%
!! TTTTTCGAAGACAAATCCAA+AGG - chr5_4:57350819-57350838 Msa0859180:three_prime_UTR 30.0%
TAAAAATGGGTACATACCTT+TGG + chr5_4:57350838-57350857 None:intergenic 30.0%
TCTAATAAGCCAATCCAAAT+AGG + chr5_4:57351171-57351190 None:intergenic 30.0%
CACTTCAAAAATGACAAAAG+TGG + chr5_4:57351358-57351377 None:intergenic 30.0%
!!! TTTTTTTGGGTTGTGTTAAC+CGG + chr5_4:57351564-57351583 None:intergenic 30.0%
GGTAGTAAACAAACAGAAAT+AGG - chr5_4:57351701-57351720 Msa0859180:CDS 30.0%
ACTAATGGGAATAAGATCAA+GGG + chr5_4:57351803-57351822 None:intergenic 30.0%
AACTAATGGGAATAAGATCA+AGG + chr5_4:57351804-57351823 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG + chr5_4:57351829-57351848 None:intergenic 30.0%
!!! TTCACTTTTTCATTGATCCT+TGG - chr5_4:57352124-57352143 Msa0859180:CDS 30.0%
GATCGAAAAACATAGAGAAA+AGG - chr5_4:57352198-57352217 Msa0859180:intron 30.0%
!! TGTTTCTTTAGAGTAGATGA+AGG + chr5_4:57352274-57352293 None:intergenic 30.0%
CGCCAATGAAAATATTCATA+AGG - chr5_4:57352330-57352349 Msa0859180:intron 30.0%
! TGGCAAACATATTTGGATTT+TGG - chr5_4:57352400-57352419 Msa0859180:intron 30.0%
! TATTTGGATTTTGGACAGAA+TGG - chr5_4:57352409-57352428 Msa0859180:intron 30.0%
! ATTTGGATTTTGGACAGAAT+GGG - chr5_4:57352410-57352429 Msa0859180:intron 30.0%
GTTTGCGATGAAAAGAAAAA+AGG + chr5_4:57352445-57352464 None:intergenic 30.0%
AAATACGTCAGAATCTAACA+CGG + chr5_4:57352525-57352544 None:intergenic 30.0%
ATTCTGACGTATTTGATATG+TGG - chr5_4:57352531-57352550 Msa0859180:intron 30.0%
TTCTGACGTATTTGATATGT+GGG - chr5_4:57352532-57352551 Msa0859180:intron 30.0%
TAAAATGGAAGAAGAAACAC+TGG + chr5_4:57352715-57352734 None:intergenic 30.0%
AATGTGCAGCAACAATAAAA+TGG + chr5_4:57352730-57352749 None:intergenic 30.0%
TATCAAGAGCTTCGTAAATA+TGG + chr5_4:57353151-57353170 None:intergenic 30.0%
!!! ATTCAGTAACCTTGCTTTTT+TGG - chr5_4:57353207-57353226 Msa0859180:intron 30.0%
! AAGGCTAAGTTAAGCTTTTT+AGG - chr5_4:57353487-57353506 Msa0859180:intron 30.0%
!!! TTATTTTAGTAGAGAGAGAG+AGG + chr5_4:57353889-57353908 None:intergenic 30.0%
! AAGATGATTTTAAGCATCTC+TGG - chr5_4:57353909-57353928 Msa0859180:intron 30.0%
CCATTAATACAAGTACGATA+AGG + chr5_4:57354094-57354113 None:intergenic 30.0%
CCTTATCGTACTTGTATTAA+TGG - chr5_4:57354091-57354110 Msa0859180:intron 30.0%
ACCAATTCCATTATTGTAAC+AGG - chr5_4:57354182-57354201 Msa0859180:intron 30.0%
! ACCTGTTACAATAATGGAAT+TGG + chr5_4:57354186-57354205 None:intergenic 30.0%
TCGCTTAATAAAACTTGAAC+AGG + chr5_4:57354220-57354239 None:intergenic 30.0%
! TTTATACCGATCCTTTAGAA+GGG + chr5_4:57354402-57354421 None:intergenic 30.0%
! TTTTATACCGATCCTTTAGA+AGG + chr5_4:57354403-57354422 None:intergenic 30.0%
! TATAAAAGCATAGAGAAGAG+AGG - chr5_4:57354416-57354435 Msa0859180:intron 30.0%
! ATAAAAGCATAGAGAAGAGA+GGG - chr5_4:57354417-57354436 Msa0859180:intron 30.0%
TATTTATGCCTGCAATAAGT+TGG - chr5_4:57354594-57354613 Msa0859180:intron 30.0%
!!! AAAGTGTTTTGGTTTCCAAA+AGG + chr5_4:57354839-57354858 None:intergenic 30.0%
GACTCATGAAGTGAAAAAAT+AGG + chr5_4:57354881-57354900 None:intergenic 30.0%
TTTATGATCATGCATTATGC+AGG - chr5_4:57355012-57355031 Msa0859180:intron 30.0%
GAAATGATTAACAAAGATCC+TGG - chr5_4:57355295-57355314 Msa0859180:five_prime_UTR 30.0%
AAGTGTAGTGTACGAAAATG+GGG - chr5_4:57350655-57350674 Msa0859180:intron 35.0%
GGAAGAAATCGAAAAGTTCA+AGG - chr5_4:57350676-57350695 Msa0859180:three_prime_UTR 35.0%
GAAATCGAAAAGTTCAAGGA+AGG - chr5_4:57350680-57350699 Msa0859180:three_prime_UTR 35.0%
TTCGAAAAAGAGAGAATCAC+TGG + chr5_4:57350808-57350827 None:intergenic 35.0%
ACTTACACATAGAGCCTATT+TGG - chr5_4:57351154-57351173 Msa0859180:intron 35.0%
TAAGTACCTGTGAGATTGAT+TGG - chr5_4:57351206-57351225 Msa0859180:intron 35.0%
AAGTACCTGTGAGATTGATT+GGG - chr5_4:57351207-57351226 Msa0859180:intron 35.0%
! CTGGTTAAGGTATCTAGAAA+AGG + chr5_4:57351528-57351547 None:intergenic 35.0%
AGCTATCTTGGAGAACTAAT+GGG + chr5_4:57351817-57351836 None:intergenic 35.0%
AAGCTATCTTGGAGAACTAA+TGG + chr5_4:57351818-57351837 None:intergenic 35.0%
!! TTATCTGCGTTTCTAGTATG+TGG - chr5_4:57352050-57352069 Msa0859180:intron 35.0%
!! CTAGTATGTGGTTGATTTGT+TGG - chr5_4:57352062-57352081 Msa0859180:intron 35.0%
!! TTGGTTGTAGAGTACTGTAT+TGG - chr5_4:57352081-57352100 Msa0859180:CDS 35.0%
TAAAGAAACACGCGAAAAAC+CGG - chr5_4:57352284-57352303 Msa0859180:intron 35.0%
! TTCATTGGCGACTAAACTTT+TGG + chr5_4:57352320-57352339 None:intergenic 35.0%
TGCTTAGTGGCAAACATATT+TGG - chr5_4:57352393-57352412 Msa0859180:intron 35.0%
! TTTGGATTTTGGACAGAATG+GGG - chr5_4:57352411-57352430 Msa0859180:intron 35.0%
TCTGACGTATTTGATATGTG+GGG - chr5_4:57352533-57352552 Msa0859180:intron 35.0%
TTTGATATGTGGGGTGATAA+AGG - chr5_4:57352542-57352561 Msa0859180:intron 35.0%
AGGCAACAAGAAAGTGAAAA+AGG - chr5_4:57352662-57352681 Msa0859180:CDS 35.0%
! GAAAGTCATCAGGTAGTTTT+TGG - chr5_4:57352866-57352885 Msa0859180:CDS 35.0%
CCACATCAAGAAAATACATC+TGG + chr5_4:57353233-57353252 None:intergenic 35.0%
! CCAGATGTATTTTCTTGATG+TGG - chr5_4:57353230-57353249 Msa0859180:intron 35.0%
GAAAGTAATCACGAAGATGA+TGG - chr5_4:57353270-57353289 Msa0859180:intron 35.0%
!! ACCTGATTGGTAATGTAAAC+CGG + chr5_4:57353380-57353399 None:intergenic 35.0%
TTATACATGAAAGCTTGAGC+AGG + chr5_4:57353428-57353447 None:intergenic 35.0%
!! TGCATGTTGATAGCTAATGA+AGG - chr5_4:57353468-57353487 Msa0859180:intron 35.0%
! TAAATTTTATGGAGACCACG+TGG - chr5_4:57353514-57353533 Msa0859180:intron 35.0%
TGTTTGAATCACTATTGGAC+AGG - chr5_4:57353714-57353733 Msa0859180:CDS 35.0%
!!! TTAAGCATCTCTGGTTCTTT+TGG - chr5_4:57353918-57353937 Msa0859180:intron 35.0%
GGAAATTAAGCATGAAGATG+AGG - chr5_4:57353965-57353984 Msa0859180:intron 35.0%
AAAAATCGAGAAGACATCTG+AGG - chr5_4:57353988-57354007 Msa0859180:intron 35.0%
TGCTAAACAAGAGAGGTTAA+AGG - chr5_4:57354019-57354038 Msa0859180:intron 35.0%
GCTGAAACCTGTTACAATAA+TGG + chr5_4:57354192-57354211 None:intergenic 35.0%
AATAAAACTTGAACAGGAGC+AGG + chr5_4:57354214-57354233 None:intergenic 35.0%
ACAAGTCTACCTTAAGCTTT+CGG + chr5_4:57354261-57354280 None:intergenic 35.0%
TCTCAAAACAGATTTGGAGA+CGG - chr5_4:57354532-57354551 Msa0859180:intron 35.0%
!!! TCTGTCTGCAAAAAGTGTTT+TGG + chr5_4:57354850-57354869 None:intergenic 35.0%
!! AGGATAGTACATTTTTGAGC+AGG - chr5_4:57354917-57354936 Msa0859180:intron 35.0%
TTAAGTTAGGGACGAAAACA+AGG + chr5_4:57355050-57355069 None:intergenic 35.0%
TCTTCTTGCCATATATCATG+CGG + chr5_4:57355079-57355098 None:intergenic 35.0%
TCAACAAAAGACGCTCTTTC+TGG - chr5_4:57350762-57350781 Msa0859180:three_prime_UTR 40.0%
!! ACATGTGCACAAGCTGTTTT+CGG - chr5_4:57351040-57351059 Msa0859180:intron 40.0%
CACATAGAGCCTATTTGGAT+TGG - chr5_4:57351159-57351178 Msa0859180:intron 40.0%
ATTCTCCCAATCAATCTCAC+AGG + chr5_4:57351215-57351234 None:intergenic 40.0%
TTTGATGTGGCTAGATCTTG+CGG - chr5_4:57352165-57352184 Msa0859180:CDS 40.0%
! TTTAGAGTAGATGAAGGCAC+TGG + chr5_4:57352268-57352287 None:intergenic 40.0%
! AACTTTTGGACACCACTTTC+CGG + chr5_4:57352306-57352325 None:intergenic 40.0%
! TTGGATTTTGGACAGAATGG+GGG - chr5_4:57352412-57352431 Msa0859180:intron 40.0%
AGGTACACGTTATTGCATAG+CGG - chr5_4:57352682-57352701 Msa0859180:intron 40.0%
ACCTGATGACTTTCATGTGT+GGG + chr5_4:57352860-57352879 None:intergenic 40.0%
TACCTGATGACTTTCATGTG+TGG + chr5_4:57352861-57352880 None:intergenic 40.0%
AACAACATCTCTAACAGCAG+AGG + chr5_4:57352906-57352925 None:intergenic 40.0%
TACATTAGCTACTGCTGTTG+CGG - chr5_4:57352978-57352997 Msa0859180:intron 40.0%
AGCAAGGTTACTGAATTAGC+AGG + chr5_4:57353203-57353222 None:intergenic 40.0%
TACATCTGGCCAAAAAAGCA+AGG + chr5_4:57353219-57353238 None:intergenic 40.0%
CAGCATCTCAAAAATTGCTG+AGG - chr5_4:57353944-57353963 Msa0859180:intron 40.0%
GACAAGTTGCTAAACAAGAG+AGG - chr5_4:57354012-57354031 Msa0859180:intron 40.0%
! TAAACCAACCTGTTTCTCCT+GGG + chr5_4:57354458-57354477 None:intergenic 40.0%
! TTAAACCAACCTGTTTCTCC+TGG + chr5_4:57354459-57354478 None:intergenic 40.0%
AAAACAGATTTGGAGACGGT+TGG - chr5_4:57354536-57354555 Msa0859180:intron 40.0%
CTGGTAAAACAAGCAGAAGA+CGG + chr5_4:57354622-57354641 None:intergenic 40.0%
CAACATGCAAGGGAATAAGT+TGG + chr5_4:57354948-57354967 None:intergenic 40.0%
CACAGGTAAACAAATACTCC+AGG + chr5_4:57355316-57355335 None:intergenic 40.0%
ATTAGCGGCAGAGTGAAACA+GGG + chr5_4:57350596-57350615 None:intergenic 45.0%
CAAGGAAGGGTAAGAAAGCA+TGG - chr5_4:57350694-57350713 Msa0859180:three_prime_UTR 45.0%
ACAAAAGACGCTCTTTCTGG+TGG - chr5_4:57350765-57350784 Msa0859180:three_prime_UTR 45.0%
!! AAGGCACTGGCTTAACAAAC+TGG + chr5_4:57352255-57352274 None:intergenic 45.0%
TCGACAGCTGGAATATGAGT+AGG + chr5_4:57352809-57352828 None:intergenic 45.0%
TACTCATATTCCAGCTGTCG+AGG - chr5_4:57352808-57352827 Msa0859180:intron 45.0%
GGATTAAATGAGCATCCTGG+AGG + chr5_4:57352839-57352858 None:intergenic 45.0%
GTGGGATTAAATGAGCATCC+TGG + chr5_4:57352842-57352861 None:intergenic 45.0%
TCCCACACATGAAAGTCATC+AGG - chr5_4:57352856-57352875 Msa0859180:CDS 45.0%
CAGCAGTAGCTAATGTATCC+TGG + chr5_4:57352975-57352994 None:intergenic 45.0%
AAATGAATTGGGCCCTGAAC+CGG - chr5_4:57353023-57353042 Msa0859180:intron 45.0%
TCTCCAGCAGGAACAGTTAA+AGG + chr5_4:57353051-57353070 None:intergenic 45.0%
TCAGAAATAGCTTCTCCAGC+AGG + chr5_4:57353063-57353082 None:intergenic 45.0%
! GCCGGTTTACATTACCAATC+AGG - chr5_4:57353376-57353395 Msa0859180:CDS 45.0%
AAGCTTGAGCAGGAAGGAAA+TGG + chr5_4:57353418-57353437 None:intergenic 45.0%
ACATGAAAGCTTGAGCAGGA+AGG + chr5_4:57353424-57353443 None:intergenic 45.0%
AAAAAAGAATACCGGCCACG+TGG + chr5_4:57353532-57353551 None:intergenic 45.0%
TAGTAGAGAGAGAGAGGTGA+GGG + chr5_4:57353883-57353902 None:intergenic 45.0%
TTAGTAGAGAGAGAGAGGTG+AGG + chr5_4:57353884-57353903 None:intergenic 45.0%
TACTTGTGCTTTCCTAAGCG+AGG + chr5_4:57354053-57354072 None:intergenic 45.0%
TGGATCCATCCGAAAGCTTA+AGG - chr5_4:57354249-57354268 Msa0859180:intron 45.0%
GTCTACCTTAAGCTTTCGGA+TGG + chr5_4:57354257-57354276 None:intergenic 45.0%
! GTTGCACCCTTCTAAAGGAT+CGG - chr5_4:57354393-57354412 Msa0859180:intron 45.0%
AAGCATAGAGAAGAGAGGGT+TGG - chr5_4:57354421-57354440 Msa0859180:intron 45.0%
!!! CGTCTTCTGCTTGTTTTACC+AGG - chr5_4:57354620-57354639 Msa0859180:intron 45.0%
!! TTGTTTTACCAGGTGCTTCG+TGG - chr5_4:57354630-57354649 Msa0859180:intron 45.0%
TGGCACAAGGTTTAAGTGTG+TGG - chr5_4:57354650-57354669 Msa0859180:intron 45.0%
ATGCGGAGCGACTTAAGTTA+GGG + chr5_4:57355062-57355081 None:intergenic 45.0%
AAGTCGCTCCGCATGATATA+TGG - chr5_4:57355068-57355087 Msa0859180:intron 45.0%
!! CAAAATAAATAAATAAAAAT+GGG + chr5_4:57350851-57350870 None:intergenic 5.0%
!! AAAAAATAAATAAATAAAGA+GGG + chr5_4:57351321-57351340 None:intergenic 5.0%
!! AAAAAAATAAATAAATAAAG+AGG + chr5_4:57351322-57351341 None:intergenic 5.0%
!!! AATGATTTTTTTTTTTTTTT+GGG + chr5_4:57351577-57351596 None:intergenic 5.0%
!!! AAATGATTTTTTTTTTTTTT+TGG + chr5_4:57351578-57351597 None:intergenic 5.0%
!!! TATTTTATTTTTTAAAAACA+AGG - chr5_4:57351639-57351658 Msa0859180:intron 5.0%
!!! TTAAAATTCATTTTTATATT+TGG - chr5_4:57351679-57351698 Msa0859180:CDS 5.0%
!!! TAAAATTCATTTTTATATTT+GGG - chr5_4:57351680-57351699 Msa0859180:CDS 5.0%
CATTAGCGGCAGAGTGAAAC+AGG + chr5_4:57350597-57350616 None:intergenic 50.0%
AAAATGTTAACCGGTGCCCC+CGG - chr5_4:57351404-57351423 Msa0859180:intron 50.0%
AGATACCTTAACCAGTGCCC+CGG - chr5_4:57351533-57351552 Msa0859180:intron 50.0%
ACAGGGTCATCCAAACTGTC+TGG - chr5_4:57351927-57351946 Msa0859180:CDS 50.0%
AGGTCTGCTACCAGACAGTT+TGG + chr5_4:57351940-57351959 None:intergenic 50.0%
ACACGCGAAAAACCGGAAAG+TGG - chr5_4:57352291-57352310 Msa0859180:intron 50.0%
TGTCATGCAGACGCAGATGA+AGG - chr5_4:57352642-57352661 Msa0859180:CDS 50.0%
!! CAGTTAAAGGCACCGGTTCA+GGG + chr5_4:57353038-57353057 None:intergenic 50.0%
!! ACAGTTAAAGGCACCGGTTC+AGG + chr5_4:57353039-57353058 None:intergenic 50.0%
! GCAGGAACAGTTAAAGGCAC+CGG + chr5_4:57353045-57353064 None:intergenic 50.0%
GTGCCTTTAACTGTTCCTGC+TGG - chr5_4:57353045-57353064 Msa0859180:intron 50.0%
! TTTTATGGAGACCACGTGGC+CGG - chr5_4:57353518-57353537 Msa0859180:intron 50.0%
TTGTGCTTTCCTAAGCGAGG+AGG + chr5_4:57354050-57354069 None:intergenic 50.0%
GGGTTGTTGCACCCTTCTAA+AGG - chr5_4:57354388-57354407 Msa0859180:intron 50.0%
TTCCAAAGCCCAGGAGAAAC+AGG - chr5_4:57354447-57354466 Msa0859180:intron 50.0%
! AACCTGTTTCTCCTGGGCTT+TGG + chr5_4:57354452-57354471 None:intergenic 50.0%
AAAGCCCAGGAGAAACAGGT+TGG - chr5_4:57354451-57354470 Msa0859180:intron 50.0%
AGACGGCACCAACTTATTGC+AGG + chr5_4:57354605-57354624 None:intergenic 50.0%
CATGCGGAGCGACTTAAGTT+AGG + chr5_4:57355063-57355082 None:intergenic 50.0%
CGGCAGAGTGAAACAGGGTT+TGG + chr5_4:57350591-57350610 None:intergenic 55.0%
AAATGTTAACCGGTGCCCCC+GGG - chr5_4:57351405-57351424 Msa0859180:intron 55.0%
TGCTTCCTTAACCAGTGCCC+CGG + chr5_4:57351426-57351445 None:intergenic 55.0%
GATACCTTAACCAGTGCCCC+GGG - chr5_4:57351534-57351553 Msa0859180:intron 55.0%
ATACCTTAACCAGTGCCCCG+GGG - chr5_4:57351535-57351554 Msa0859180:intron 55.0%
GGTGAGGGAGGATGAGAGAA+TGG + chr5_4:57353868-57353887 None:intergenic 55.0%
TAGAGAGAGAGAGGTGAGGG+AGG + chr5_4:57353880-57353899 None:intergenic 55.0%
AAGGCATGTCCTCCTCGCTT+AGG - chr5_4:57354038-57354057 Msa0859180:intron 55.0%
! GGTTGGTTGTTCCAAAGCCC+AGG - chr5_4:57354438-57354457 Msa0859180:intron 55.0%
AATGTTAACCGGTGCCCCCG+GGG - chr5_4:57351406-57351425 Msa0859180:intron 60.0%
TTCCTTAACCAGTGCCCCGG+GGG + chr5_4:57351423-57351442 None:intergenic 60.0%
CTTCCTTAACCAGTGCCCCG+GGG + chr5_4:57351424-57351443 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG + chr5_4:57351425-57351444 None:intergenic 60.0%
TACCTTAACCAGTGCCCCGG+GGG - chr5_4:57351536-57351555 Msa0859180:intron 60.0%
TTGTGTTAACCGGTGCCCCC+GGG + chr5_4:57351554-57351573 None:intergenic 60.0%
GTTGTGTTAACCGGTGCCCC+CGG + chr5_4:57351555-57351574 None:intergenic 60.0%
GGAGGATCAACCTCGACAGC+TGG + chr5_4:57352821-57352840 None:intergenic 60.0%
! GCTGTCGAGGTTGATCCTCC+AGG - chr5_4:57352821-57352840 Msa0859180:intron 60.0%
ACCAGGTGCTTCGTGGCACA+AGG - chr5_4:57354637-57354656 Msa0859180:intron 60.0%
! ACCTTGTGCCACGAAGCACC+TGG + chr5_4:57354641-57354660 None:intergenic 60.0%
TGTGTTAACCGGTGCCCCCG+GGG + chr5_4:57351553-57351572 None:intergenic 65.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr5_4:57351418-57351437 Msa0859180:intron 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG + chr5_4:57351418-57351437 None:intergenic 70.0%
! AACCAGTGCCCCGGGGGCAC+CGG + chr5_4:57351542-57351561 None:intergenic 75.0%
! AACCAGTGCCCCGGGGGCAC+CGG - chr5_4:57351542-57351561 Msa0859180:intron 75.0%
! AACCGGTGCCCCCGGGGCAC+TGG - chr5_4:57351412-57351431 Msa0859180:intron 80.0%
! AACCGGTGCCCCCGGGGCAC+TGG + chr5_4:57351412-57351431 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 57350587 57355344 57350587 ID=Msa0859180;Name=Msa0859180
chr5_4 mRNA 57350587 57355344 57350587 ID=Msa0859180-mRNA-1;Parent=Msa0859180;Name=Msa0859180-mRNA-1;_AED=0.08;_eAED=0.08;_QI=85|1|1|1|0.83|0.84|13|275|366
chr5_4 exon 57350587 57350637 57350587 ID=Msa0859180-mRNA-1:exon:17493;Parent=Msa0859180-mRNA-1
chr5_4 exon 57350670 57350897 57350670 ID=Msa0859180-mRNA-1:exon:17492;Parent=Msa0859180-mRNA-1
chr5_4 exon 57351463 57351542 57351463 ID=Msa0859180-mRNA-1:exon:17491;Parent=Msa0859180-mRNA-1
chr5_4 exon 57351661 57351727 57351661 ID=Msa0859180-mRNA-1:exon:17490;Parent=Msa0859180-mRNA-1
chr5_4 exon 57351862 57351984 57351862 ID=Msa0859180-mRNA-1:exon:17489;Parent=Msa0859180-mRNA-1
chr5_4 exon 57352076 57352195 57352076 ID=Msa0859180-mRNA-1:exon:17488;Parent=Msa0859180-mRNA-1
chr5_4 exon 57352609 57352697 57352609 ID=Msa0859180-mRNA-1:exon:17487;Parent=Msa0859180-mRNA-1
chr5_4 exon 57352842 57352955 57352842 ID=Msa0859180-mRNA-1:exon:17486;Parent=Msa0859180-mRNA-1
chr5_4 exon 57353054 57353134 57353054 ID=Msa0859180-mRNA-1:exon:17485;Parent=Msa0859180-mRNA-1
chr5_4 exon 57353248 57353279 57353248 ID=Msa0859180-mRNA-1:exon:17484;Parent=Msa0859180-mRNA-1
chr5_4 exon 57353368 57353416 57353368 ID=Msa0859180-mRNA-1:exon:17483;Parent=Msa0859180-mRNA-1
chr5_4 exon 57353580 57353752 57353580 ID=Msa0859180-mRNA-1:exon:17482;Parent=Msa0859180-mRNA-1
chr5_4 exon 57355091 57355344 57355091 ID=Msa0859180-mRNA-1:exon:17481;Parent=Msa0859180-mRNA-1
chr5_4 five_prime_UTR 57355260 57355344 57355260 ID=Msa0859180-mRNA-1:five_prime_utr;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57355091 57355259 57355091 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57353580 57353752 57353580 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57353368 57353416 57353368 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57353248 57353279 57353248 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57353054 57353134 57353054 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57352842 57352955 57352842 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57352609 57352697 57352609 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57352076 57352195 57352076 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57351862 57351984 57351862 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57351661 57351727 57351661 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57351463 57351542 57351463 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 CDS 57350894 57350897 57350894 ID=Msa0859180-mRNA-1:cds;Parent=Msa0859180-mRNA-1
chr5_4 three_prime_UTR 57350670 57350893 57350670 ID=Msa0859180-mRNA-1:three_prime_utr;Parent=Msa0859180-mRNA-1
chr5_4 three_prime_UTR 57350587 57350637 57350587 ID=Msa0859180-mRNA-1:three_prime_utr;Parent=Msa0859180-mRNA-1
Gene Sequence

>Msa0859180

ATGGGGAAGAAATCGAAAAGTTCAAGGAAGGGTAAGAAAGCATGGAGAGCTAACATAAGCACAGAAGAAATCGAAGATTTCTTTGAGAAATCAACAAAAGACGCTCTTTCTGGTGGTTCTCTTCAAGCTGTTTCCAGTGATTCTCTCTTTTTCGAAGACAAATCCAAAGATCTTGCGGTAAAGAAGAAGATCGAAAAACATAGAGAAAAGGTGCTTCATGTTGATAGCATACTACAAAAAAACCAGTTTGTTAAGCCAGTGCCTTCATCTACTCTAAAGAAACACGCGAAAAACCGGAAAGTGGTGTCCAAAAGTTTAGTCGCCAATGAAAATATTCATAAGGAGGGTTCCGTGTTAGATTCTGACGTATTTGATATGTGGGGTGATAAAGACGCAGATGAAGGCAACAAGAAAGTGAAAAAGTTGTGCAAGCCTACTCATATTCCAGCTGTCGAGGTTGATCCTCCAGGATGCTCATTTAATCCCACACATGAAAGTCATCAGGATACATTAGCTACTGCTGTTGCGGAAGAAATGATTAAAGTCTACAGAAATGAATTGGGCCCTGAACCGGTGCCTTTAACTGTTCCTGCTGGAGAAGCTATTTCTGAAGAAGATATGTATTTTCTTGATGTGGAGAAGAGTGACGATGATGAAAGTAATCACGAAGATGATGGTGAAAATGAAGATGATGCGTCAGAGAAAAAGCCCATTAAAACAAAGAAAGTGACTAGAGTTGAGTTGAATAAGAGAATTCGGCGCAGAGAACAATTGAAAAAAGAAGCCGAATCAAAGAAGAAGAAGAATTTCTCAAAAGAAATTGATAGCATCTCAAAAATTGCTGAGGAAATTAAGCATGAAGATGAGGAAAAATCGAGAAGACATCTGAGGCGACAAGTTGCTAAACAAGAGAGGTTAAAGGCATGTCCTCCTCGCTTAGGAAAGCACAAGTTTCAGCCTGCTCCTGTTCAAGTTTTATTAAGCGAAGAGATAAATGGATCCATCCGAAAGCTTAAGGGTTGTTGCACCCTTCTAAAGGATCGGTATAAAAGCATAGAGAAGAGAGGGTTGGTTGTTCCAAAGCCCAGGAGAAACAGGTAG

Protein sequence

>Msa0859180

MGKKSKSSRKGKKAWRANISTEEIEDFFEKSTKDALSGGSLQAVSSDSLFFEDKSKDLAVKKKIEKHREKVLHVDSILQKNQFVKPVPSSTLKKHAKNRKVVSKSLVANENIHKEGSVLDSDVFDMWGDKDADEGNKKVKKLCKPTHIPAVEVDPPGCSFNPTHESHQDTLATAVAEEMIKVYRNELGPEPVPLTVPAGEAISEEDMYFLDVEKSDDDESNHEDDGENEDDASEKKPIKTKKVTRVELNKRIRRREQLKKEAESKKKKNFSKEIDSISKIAEEIKHEDEEKSRRHLRRQVAKQERLKACPPRLGKHKFQPAPVQVLLSEEINGSIRKLKGCCTLLKDRYKSIEKRGLVVPKPRRNR*