AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1419000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419000 MtrunA17_Chr1g0152561 98.837 344 4 0 1 344 1 344 0.0 683
Msa1419000 MtrunA17_Chr3g0134761 75.831 331 73 4 16 340 5 334 4.85e-177 494
Msa1419000 MtrunA17_Chr2g0290151 52.448 286 133 1 61 343 175 460 6.14e-85 264
Msa1419000 MtrunA17_Chr1g0183781 51.408 284 137 1 61 344 440 722 2.54e-84 270
Msa1419000 MtrunA17_Chr3g0106931 53.957 278 127 1 61 338 553 829 2.26e-81 264
Msa1419000 MtrunA17_Chr7g0261371 50.360 278 137 1 61 338 514 790 1.81e-77 253
Msa1419000 MtrunA17_Chr4g0044411 48.188 276 143 0 61 336 373 648 7.96e-73 238
Msa1419000 MtrunA17_Chr4g0031431 44.366 284 158 0 61 344 353 636 1.60e-67 224
Msa1419000 MtrunA17_Chr7g0237931 42.652 279 154 2 56 334 333 605 5.52e-62 208
Msa1419000 MtrunA17_Chr1g0199321 44.203 276 154 0 61 336 345 620 3.43e-61 206
Msa1419000 MtrunA17_Chr7g0248251 40.283 283 168 1 54 336 361 642 5.32e-61 206
Msa1419000 MtrunA17_Chr5g0437411 41.034 290 154 6 64 340 408 693 4.82e-51 180
Msa1419000 MtrunA17_Chr7g0275081 38.078 281 163 6 72 343 182 460 1.48e-39 145
Msa1419000 MtrunA17_Chr5g0429231 35.540 287 179 5 61 341 34 320 1.02e-37 138
Msa1419000 MtrunA17_Chr7g0234671 34.909 275 168 7 70 336 180 451 6.34e-36 135
Msa1419000 MtrunA17_Chr2g0284461 36.918 279 168 6 64 336 399 675 2.58e-34 133
Msa1419000 MtrunA17_Chr5g0435041 33.916 286 182 5 55 335 14 297 8.11e-30 117
Msa1419000 MtrunA17_Chr3g0118001 28.727 275 191 2 64 335 214 486 1.53e-28 115
Msa1419000 MtrunA17_Chr8g0377151 30.938 320 199 9 30 338 404 712 9.57e-28 114
Msa1419000 MtrunA17_Chr4g0059201 29.480 346 225 10 7 343 376 711 4.45e-25 106
Msa1419000 MtrunA17_Chr3g0137061 29.492 295 194 6 61 343 110 402 8.13e-25 104
Msa1419000 MtrunA17_Chr1g0189811 33.564 289 181 6 63 341 156 443 1.52e-23 100
Msa1419000 MtrunA17_Chr3g0122721 33.083 266 166 8 82 338 448 710 3.19e-23 100
Msa1419000 MtrunA17_Chr3g0111451 34.146 287 179 6 61 339 41 325 4.30e-23 99.0
Msa1419000 MtrunA17_Chr1g0149941 29.617 287 185 9 63 335 175 458 3.05e-22 97.8
Msa1419000 MtrunA17_Chr3g0117851 31.522 276 146 8 74 342 390 629 2.95e-21 94.7
Msa1419000 MtrunA17_Chr4g0048811 33.019 212 135 5 135 343 121 328 1.30e-20 90.9
Msa1419000 MtrunA17_Chr6g0449461 30.035 283 150 6 64 339 44 285 5.41e-19 86.7
Msa1419000 MtrunA17_Chr6g0451581 24.723 271 199 2 64 331 241 509 6.84e-19 87.8
Msa1419000 MtrunA17_Chr8g0350681 29.237 236 155 6 101 331 238 466 7.25e-19 87.8
Msa1419000 MtrunA17_Chr4g0013091 32.143 280 165 8 72 336 429 698 5.39e-18 85.1
Msa1419000 MtrunA17_Chr2g0280671 29.787 282 186 6 60 335 104 379 2.26e-17 82.4
Msa1419000 MtrunA17_Chr7g0259851 28.079 203 138 2 61 263 269 463 1.63e-14 74.7
Msa1419000 MtrunA17_Chr1g0205751 26.400 250 176 3 74 323 295 536 3.55e-14 73.6
Msa1419000 MtrunA17_Chr1g0199031 37.607 117 56 1 138 254 18 117 7.81e-14 67.8
Msa1419000 MtrunA17_Chr5g0413681 26.042 288 205 4 64 343 386 673 9.36e-14 72.4
Msa1419000 MtrunA17_Chr7g0246731 23.620 326 205 7 61 344 156 479 1.59e-13 71.6
Msa1419000 MtrunA17_Chr5g0394261 26.400 250 176 3 74 323 292 533 7.24e-13 69.7
Msa1419000 MtrunA17_Chr7g0215741 33.793 145 93 1 99 240 597 741 7.82e-12 66.6
Msa1419000 MtrunA17_Chr4g0044631 35.000 140 89 2 198 335 251 390 8.85e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419000 AT3G01400.1 81.250 336 60 2 5 339 10 343 0.0 548
Msa1419000 AT5G58680.1 73.669 338 83 4 5 338 6 341 4.34e-177 495
Msa1419000 AT2G23140.3 49.329 298 144 2 47 338 334 630 3.62e-85 270
Msa1419000 AT2G23140.5 49.329 298 144 2 47 338 334 630 3.62e-85 270
Msa1419000 AT2G23140.1 47.840 324 158 4 25 338 500 822 3.05e-83 269
Msa1419000 AT2G23140.2 47.840 324 158 4 25 338 497 819 3.12e-83 269
Msa1419000 AT2G23140.4 47.840 324 158 4 25 338 497 819 3.12e-83 269
Msa1419000 AT4G16490.1 51.579 285 136 1 61 343 185 469 1.04e-82 259
Msa1419000 AT3G54790.2 50.714 280 136 2 63 341 440 718 1.46e-78 254
Msa1419000 AT5G67340.1 49.822 281 139 2 61 340 423 702 2.19e-78 254
Msa1419000 AT5G67340.1 33.125 160 104 3 61 219 548 705 9.20e-11 63.5
Msa1419000 AT5G67340.2 49.822 281 139 2 61 340 423 702 2.19e-78 254
Msa1419000 AT5G67340.2 33.125 160 104 3 61 219 548 705 9.20e-11 63.5
Msa1419000 AT3G54790.3 50.714 280 136 2 63 341 476 754 5.43e-78 254
Msa1419000 AT3G54790.1 50.714 280 136 2 63 341 476 754 5.43e-78 254
Msa1419000 AT1G23030.1 45.704 291 155 2 49 336 319 609 1.57e-71 234
Msa1419000 AT1G71020.2 47.482 278 144 2 61 336 195 472 5.45e-69 224
Msa1419000 AT1G71020.1 47.482 278 144 2 61 336 343 620 8.07e-68 224
Msa1419000 AT3G46510.1 44.118 272 152 0 61 332 354 625 8.05e-66 219
Msa1419000 AT2G28830.1 44.322 273 150 2 61 331 285 557 1.31e-64 214
Msa1419000 AT3G54850.1 46.403 278 147 2 60 336 346 622 9.51e-61 206
Msa1419000 AT5G42340.1 41.667 276 161 0 59 334 379 654 1.41e-53 187
Msa1419000 AT3G07360.5 34.146 287 177 7 59 336 34 317 3.08e-36 134
Msa1419000 AT3G07360.3 34.146 287 177 7 59 336 34 317 3.08e-36 134
Msa1419000 AT3G07360.9 34.146 287 177 7 59 336 34 317 3.08e-36 134
Msa1419000 AT3G07360.6 34.146 287 177 7 59 336 34 317 3.08e-36 134
Msa1419000 AT3G07360.2 34.146 287 177 7 59 336 34 317 3.08e-36 134
Msa1419000 AT3G07360.8 34.146 287 177 7 59 336 34 317 3.08e-36 134
Msa1419000 AT3G07360.10 34.146 287 177 7 59 336 34 317 3.08e-36 134
Msa1419000 AT3G07360.7 34.146 287 177 7 59 336 34 317 3.08e-36 134
Msa1419000 AT3G07360.4 34.146 287 177 7 59 336 34 317 3.08e-36 134
Msa1419000 AT3G07360.1 34.146 287 177 7 59 336 169 452 3.22e-35 134
Msa1419000 AT4G12710.1 35.587 281 170 8 68 338 55 334 4.72e-32 124
Msa1419000 AT3G03440.1 32.872 289 185 6 61 342 66 352 6.13e-30 118
Msa1419000 AT1G29340.1 38.489 278 165 6 64 336 411 687 2.18e-29 119
Msa1419000 AT1G67530.2 32.975 279 177 6 71 341 436 712 6.54e-28 115
Msa1419000 AT1G67530.1 32.975 279 177 6 71 341 436 712 6.54e-28 115
Msa1419000 AT1G67530.4 32.975 279 177 6 71 341 436 712 6.54e-28 115
Msa1419000 AT5G40140.1 31.047 277 183 4 64 335 233 506 2.76e-27 112
Msa1419000 AT5G62560.1 30.216 278 187 4 63 335 238 513 2.94e-27 112
Msa1419000 AT5G14510.1 34.050 279 173 7 64 335 5 279 2.84e-25 104
Msa1419000 AT1G27910.1 31.126 302 192 7 51 338 407 706 1.03e-24 105
Msa1419000 AT1G24330.1 31.939 263 170 6 83 338 448 708 3.19e-23 101
Msa1419000 AT1G24330.2 31.939 263 170 6 83 338 448 708 3.19e-23 101
Msa1419000 AT4G31890.3 31.970 269 168 8 79 335 163 428 1.56e-22 99.0
Msa1419000 AT4G31890.2 31.970 269 168 8 79 335 163 428 1.56e-22 99.0
Msa1419000 AT4G31890.1 31.970 269 168 8 79 335 163 428 1.56e-22 99.0
Msa1419000 AT5G18320.1 28.713 303 190 9 57 336 149 448 9.92e-21 93.2
Msa1419000 AT5G65200.1 26.573 286 193 4 64 336 229 510 2.42e-20 92.4
Msa1419000 AT4G21350.1 32.042 284 185 5 55 334 88 367 3.99e-20 90.5
Msa1419000 AT3G47820.1 30.545 275 176 7 71 335 218 487 7.93e-20 90.9
Msa1419000 AT1G10560.1 28.621 290 195 7 64 342 393 681 1.23e-19 90.5
Msa1419000 AT2G25130.1 29.699 266 173 7 82 335 132 395 2.89e-19 89.0
Msa1419000 AT5G01830.1 30.657 274 173 8 72 336 380 645 9.38e-19 87.8
Msa1419000 AT1G60190.1 27.208 283 191 9 74 342 389 670 3.97e-17 83.2
Msa1419000 AT5G13060.1 25.941 239 155 3 61 292 311 534 5.38e-14 73.6
Msa1419000 AT5G50900.1 28.679 265 180 5 62 320 147 408 1.77e-13 71.6
Msa1419000 AT2G27430.1 26.689 296 202 6 55 341 73 362 2.87e-13 70.9
Msa1419000 AT3G19380.1 27.863 262 171 7 72 318 121 379 2.26e-12 68.2
Msa1419000 AT1G77460.2 29.317 249 156 7 97 335 467 705 2.66e-12 68.6
Msa1419000 AT1G77460.3 29.317 249 156 7 97 335 467 705 2.66e-12 68.6
Msa1419000 AT1G77460.4 29.317 249 156 7 97 335 467 705 2.66e-12 68.6
Msa1419000 AT1G77460.1 29.317 249 156 7 97 335 467 705 2.66e-12 68.6
Msa1419000 AT1G01830.1 27.755 245 171 5 48 287 155 398 2.99e-12 68.2
Msa1419000 AT1G01830.3 27.755 245 171 5 48 287 155 398 2.99e-12 68.2
Msa1419000 AT1G01830.2 27.755 245 171 5 48 287 155 398 2.99e-12 68.2
Msa1419000 AT2G44900.1 33.103 145 94 1 99 240 608 752 7.50e-12 67.0
Msa1419000 AT2G44900.2 33.103 145 94 1 99 240 608 752 7.50e-12 67.0
Msa1419000 AT3G60350.1 34.932 146 90 2 99 240 599 743 3.71e-11 65.1
Msa1419000 AT3G60350.2 34.932 146 90 2 99 240 599 743 3.71e-11 65.1
Msa1419000 AT1G61350.1 23.404 282 163 9 58 330 143 380 6.76e-11 63.9
Msa1419000 AT5G18330.1 27.778 270 169 8 57 306 142 405 8.33e-11 63.2

Find 121 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTTATTGGTGAATCTTCT+AGG 0.217498 tig0024656:+75714 Msa1419000:CDS
GAAGTAACTAACGAAATTAA+TGG 0.228085 tig0024656:-75386 None:intergenic
ATCAGGTGCAATTCCGTTAT+TGG 0.234218 tig0024656:+75701 Msa1419000:CDS
GCCTAACGCAAACACCGATA+TGG 0.286572 tig0024656:+75055 Msa1419000:exon
GTACGAAAGGAGAATTTATA+TGG 0.293964 tig0024656:-74958 None:intergenic
GGATGCTATGGTTGTGGTTC+GGG 0.316819 tig0024656:-75018 None:intergenic
TGAAGGTGCCATTCCTCCTT+TGG 0.322339 tig0024656:+76073 Msa1419000:CDS
TTTGCGTTAGGCTTGGAATT+AGG 0.325073 tig0024656:-75044 None:intergenic
TGTGGTTCGGGTTGGAGGTT+CGG 0.331102 tig0024656:-75006 None:intergenic
TTAGTTAGAGCGTTAAATTC+AGG 0.337381 tig0024656:+75512 Msa1419000:CDS
CGGATGCTATGGTTGTGGTT+CGG 0.345665 tig0024656:-75019 None:intergenic
GTTTGTAAATATCTTCTTAA+CGG 0.347824 tig0024656:+77265 Msa1419000:three_prime_UTR
AGAAAAGAATAAAATGTTAC+TGG 0.354379 tig0024656:+77384 Msa1419000:three_prime_UTR
TACATGTGTAACCAAGTCTT+GGG 0.375610 tig0024656:-74914 None:intergenic
TTGGTTGAGATTGTGGAGGT+TGG 0.376021 tig0024656:+75966 Msa1419000:CDS
CACCGTATTCTTGAAGTTGC+AGG 0.379035 tig0024656:-75415 None:intergenic
GAAAGTGTTGGTTGAGTTGA+TGG 0.395341 tig0024656:+75836 Msa1419000:CDS
ATCGAATATGGTGGATAAAT+CGG 0.413047 tig0024656:+75869 Msa1419000:CDS
ATCGGTGTTTGCGTTAGGCT+TGG 0.429321 tig0024656:-75051 None:intergenic
TTTCTGTTCTTCGATTGAAT+CGG 0.431111 tig0024656:-75282 None:intergenic
GGAAGTTGAATCGTCGTTGA+TGG 0.431808 tig0024656:-75123 None:intergenic
TGCTCTCCTTCGTCTATCTC+AGG 0.438091 tig0024656:+75565 Msa1419000:CDS
GAGAAGCTTTGTAAAGTTTG+TGG 0.438474 tig0024656:+77287 Msa1419000:three_prime_UTR
CGAATCAAAATTGCTAAAGC+TGG 0.447290 tig0024656:+75353 Msa1419000:CDS
TGGAGGAATACGCGGGAAGA+AGG 0.449541 tig0024656:+75740 Msa1419000:CDS
AAAGAACTAATAGCTTCTTC+CGG 0.451795 tig0024656:+75476 Msa1419000:CDS
CACAAATCGCGCCAAACAAA+AGG 0.454708 tig0024656:+76115 Msa1419000:CDS
AACTAACGGTTTAATAGCTC+CGG 0.461417 tig0024656:-75495 None:intergenic
TGGTCAAGAACACAATGAAT+TGG 0.461451 tig0024656:+77210 Msa1419000:three_prime_UTR
GCTATGGTTGTGGTTCGGGT+TGG 0.462253 tig0024656:-75014 None:intergenic
ATGGTTGTGGTTCGGGTTGG+AGG 0.462367 tig0024656:-75011 None:intergenic
TTGGTTGCTTTGACGCAGTC+CGG 0.462970 tig0024656:+76092 Msa1419000:CDS
CCTAACGCAAACACCGATAT+GGG 0.463513 tig0024656:+75056 Msa1419000:exon
CGCAGGCGAGGAAGAGTCGT+CGG 0.463723 tig0024656:-75208 None:intergenic
GGAGGCGAAGGTTGCGTTGG+TGG 0.465398 tig0024656:+75923 Msa1419000:CDS
TTGTTTGGCGCGATTTGTGC+CGG 0.465975 tig0024656:-76111 None:intergenic
GTTAGGCTTGGAATTAGGTT+CGG 0.466622 tig0024656:-75039 None:intergenic
GGAGAATTTATATGGGAGAG+AGG 0.472276 tig0024656:-74950 None:intergenic
GAGTGTGTTGGTATCGGTGC+CGG 0.474240 tig0024656:+75902 Msa1419000:CDS
TTGGTGAATCTTCTAGGAAG+TGG 0.474246 tig0024656:+75720 Msa1419000:CDS
CCTAGAAGATTCACCAATAA+CGG 0.474649 tig0024656:-75714 None:intergenic
GAGAATTTATATGGGAGAGA+GGG 0.475558 tig0024656:-74949 None:intergenic
AAGATGAGAGCGGTGAAAGC+GGG 0.475585 tig0024656:+75807 Msa1419000:CDS
GAAGAGAACAAGGCGGCGAT+TGG 0.476176 tig0024656:+75675 Msa1419000:CDS
GGAATTAGGTTCGGATGCTA+TGG 0.477196 tig0024656:-75030 None:intergenic
AAGGCGGCGATTGGAAGATC+AGG 0.482551 tig0024656:+75684 Msa1419000:CDS
ACCAACGCAACCTTCGCCTC+CGG 0.483680 tig0024656:-75921 None:intergenic
TTACATGTGTAACCAAGTCT+TGG 0.485092 tig0024656:-74915 None:intergenic
GGGTTGGAGGTTCGGAGCCA+CGG 0.489715 tig0024656:-74998 None:intergenic
GCACCATAAAATAATTGCTA+GGG 0.490566 tig0024656:-77145 None:intergenic
GGTATCGGTGCCGGAGGCGA+AGG 0.495124 tig0024656:+75911 Msa1419000:CDS
CCCATATCGGTGTTTGCGTT+AGG 0.498952 tig0024656:-75056 None:intergenic
GTAACTCTCTGTTCCCATAT+CGG 0.503292 tig0024656:-75069 None:intergenic
AGGTTCGGATGCTATGGTTG+TGG 0.504070 tig0024656:-75024 None:intergenic
AATTTCGTTAGTTACTTCAC+AGG 0.505937 tig0024656:+75391 Msa1419000:CDS
GCAGGCGAGGAAGAGTCGTC+GGG 0.507232 tig0024656:-75207 None:intergenic
GCCGGTGTTGGTTGAGATTG+TGG 0.507527 tig0024656:+75959 Msa1419000:CDS
TAGCGCGGCGGTTCGATCCA+TGG 0.519060 tig0024656:+76043 Msa1419000:CDS
TCTGATGTACGTGTAGATCT+TGG 0.520804 tig0024656:-77109 None:intergenic
CGGAGACAAGTTGACGGATG+AGG 0.526478 tig0024656:-75250 None:intergenic
CGGGAAGAAGGACGCGTCTA+CGG 0.528830 tig0024656:+75752 Msa1419000:CDS
GACTGCAACAGTGACAGATC+CGG 0.529495 tig0024656:+75158 Msa1419000:CDS
CAAAGCAACCAAAGGAGGAA+TGG 0.530629 tig0024656:-76081 None:intergenic
AGCACCATAAAATAATTGCT+AGG 0.531539 tig0024656:-77146 None:intergenic
AACAGAGAGTTACACATACA+TGG 0.531557 tig0024656:+75079 Msa1419000:CDS
AGAAGTGGTGGCGAATTCGC+CGG 0.533976 tig0024656:-75177 None:intergenic
CGATCCATGGTGGCTCGTGA+AGG 0.535543 tig0024656:+76056 Msa1419000:CDS
ATTGCTCGCAAAGAATAAAC+CGG 0.537284 tig0024656:+75325 Msa1419000:CDS
GATTGAATCGGAGTGAAGAT+CGG 0.537748 tig0024656:-75270 None:intergenic
AAGGTTGCGTTGGTGGAAGA+AGG 0.538669 tig0024656:+75930 Msa1419000:CDS
GCCGGAGGCGAAGGTTGCGT+TGG 0.541900 tig0024656:+75920 Msa1419000:CDS
AGTTTGTGGTGTAAATCATA+CGG 0.546547 tig0024656:+77301 Msa1419000:three_prime_UTR
TGCGAGCAATCGAATTTCCA+TGG 0.550132 tig0024656:-75312 None:intergenic
TACGAAAGGAGAATTTATAT+GGG 0.554574 tig0024656:-74957 None:intergenic
GAAGATCGGAGACAAGTTGA+CGG 0.556676 tig0024656:-75256 None:intergenic
GACCTGCAACTTCAAGAATA+CGG 0.556927 tig0024656:+75413 Msa1419000:CDS
TCATCCTACACCCCAAGACT+TGG 0.561204 tig0024656:+74903 None:intergenic
AGAAGGTGGTGTGCCGGTGT+TGG 0.561302 tig0024656:+75947 Msa1419000:CDS
AGAACAGAAACAAGCTGCCA+TGG 0.562865 tig0024656:+75295 Msa1419000:CDS
GAATTTAACGCTCTAACTAA+CGG 0.564280 tig0024656:-75509 None:intergenic
GGTGGAAGAAGGTGGTGTGC+CGG 0.565802 tig0024656:+75941 Msa1419000:CDS
TCGTCGGGAGGTAGAAGAAG+TGG 0.568427 tig0024656:-75192 None:intergenic
AGAAACTAATTGAGCTTCTG+AGG 0.580867 tig0024656:+77083 Msa1419000:CDS
TCCACAATCTCAACCAACAC+CGG 0.586132 tig0024656:-75960 None:intergenic
GTATACTCTGTGTTCTGTGA+AGG 0.596489 tig0024656:+75779 Msa1419000:CDS
GTAACCAAGTCTTGGGGTGT+AGG 0.598630 tig0024656:-74907 None:intergenic
CTAGGAAGTGGAGGAATACG+CGG 0.602566 tig0024656:+75732 Msa1419000:CDS
TAAGATGAGAGCGGTGAAAG+CGG 0.603828 tig0024656:+75806 Msa1419000:CDS
GGTTGGATCGCAGAGACAGA+AGG 0.604932 tig0024656:+75983 Msa1419000:CDS
GGCACCTTCACGAGCCACCA+TGG 0.605176 tig0024656:-76060 None:intergenic
TATTCTGTTACAGATTTGTG+AGG 0.606208 tig0024656:+76019 Msa1419000:CDS
GTTGCGTTGGTGGAAGAAGG+TGG 0.609924 tig0024656:+75933 Msa1419000:CDS
ATTACAGGTGGAAGAGAACA+AGG 0.611067 tig0024656:+75665 Msa1419000:intron
AGTGTTGGTTGAGTTGATGG+CGG 0.612937 tig0024656:+75839 Msa1419000:CDS
TGCGTCAAAGCAACCAAAGG+AGG 0.612998 tig0024656:-76086 None:intergenic
ACTGTTGCAGTCACTGAAAG+CGG 0.614710 tig0024656:-75147 None:intergenic
GGCGAGGAAGAGTCGTCGGG+AGG 0.616350 tig0024656:-75204 None:intergenic
GTGAATCTTCTAGGAAGTGG+AGG 0.623068 tig0024656:+75723 Msa1419000:CDS
AGATGAGAGCGGTGAAAGCG+GGG 0.626464 tig0024656:+75808 Msa1419000:CDS
TAGACGAAGAAGTGTACGAA+AGG 0.629451 tig0024656:-74971 None:intergenic
GACTGCGTCAAAGCAACCAA+AGG 0.631800 tig0024656:-76089 None:intergenic
AGCGGGGATAATGAAAGTGT+TGG 0.635236 tig0024656:+75824 Msa1419000:CDS
TAGGAAGTGGAGGAATACGC+GGG 0.637423 tig0024656:+75733 Msa1419000:CDS
TGTGTTGGTATCGGTGCCGG+AGG 0.656005 tig0024656:+75905 Msa1419000:CDS
AAGTTGACGGATGAGGTCAT+CGG 0.659006 tig0024656:-75243 None:intergenic
TCGGGAGGTAGAAGAAGTGG+TGG 0.663074 tig0024656:-75189 None:intergenic
ACATGTGTAACCAAGTCTTG+GGG 0.663090 tig0024656:-74913 None:intergenic
GCAGAGACAGAAGGAAATTG+CGG 0.663880 tig0024656:+75992 Msa1419000:CDS
ACAGAGAGTTACACATACAT+GGG 0.672322 tig0024656:+75080 Msa1419000:CDS
TAATAACCTGAGATAGACGA+AGG 0.681280 tig0024656:-75571 None:intergenic
ACAGATTTGTGAGGATAGCG+CGG 0.684005 tig0024656:+76028 Msa1419000:CDS
GTTGCAGTCACTGAAAGCGG+AGG 0.687507 tig0024656:-75144 None:intergenic
CGCGGCGGTTCGATCCATGG+TGG 0.687911 tig0024656:+76046 Msa1419000:CDS
CAAAGAGAGATTCAAAATCG+CGG 0.688714 tig0024656:-75441 None:intergenic
GGTGTTGGTTGAGATTGTGG+AGG 0.688844 tig0024656:+75962 Msa1419000:CDS
GAAGGAGAATAAGATGAGAG+CGG 0.703303 tig0024656:+75797 Msa1419000:CDS
GAGACAGAAGGAAATTGCGG+CGG 0.714686 tig0024656:+75995 Msa1419000:CDS
ACTTCTTCGTCTACACACCG+TGG 0.760862 tig0024656:+74981 Msa1419000:five_prime_UTR
TTGTTAATGTGTAAACATCG+TGG 0.763353 tig0024656:+77190 Msa1419000:three_prime_UTR
GATTTGTGAGGATAGCGCGG+CGG 0.801712 tig0024656:+76031 Msa1419000:CDS
ACAGGTGGAAGAGAACAAGG+CGG 0.815311 tig0024656:+75668 Msa1419000:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAACTATATATCAA+TGG + tig0024656:76463-76482 Msa1419000:intron 10.0%
!! TAATAAATTAATAATAATGC+AGG - tig0024656:76824-76843 None:intergenic 10.0%
!!! TTTGTTTTCAATTTAATTAG+AGG + tig0024656:76418-76437 Msa1419000:intron 15.0%
!!! TAATAATGTTTTTCTGTTTT+TGG + tig0024656:77047-77066 Msa1419000:intron 15.0%
!!! TTGATTATTGAAAGTTCTAA+CGG + tig0024656:75637-75656 Msa1419000:intron 20.0%
!!! ATAATATTCTACCTTTTGTT+TGG - tig0024656:76129-76148 None:intergenic 20.0%
!!! TCCTAAATTTTGTTTTTACT+CGG + tig0024656:76278-76297 Msa1419000:intron 20.0%
!! TCTTGAATATTCTTATTGAA+TGG + tig0024656:76875-76894 Msa1419000:intron 20.0%
!! CTTGAATATTCTTATTGAAT+GGG + tig0024656:76876-76895 Msa1419000:intron 20.0%
!! GTTTGTAAATATCTTCTTAA+CGG + tig0024656:77265-77284 Msa1419000:three_prime_UTR 20.0%
!! AGAAAAGAATAAAATGTTAC+TGG + tig0024656:77384-77403 Msa1419000:three_prime_UTR 20.0%
! TACGAAAGGAGAATTTATAT+GGG - tig0024656:74960-74979 None:intergenic 25.0%
! GAAGTAACTAACGAAATTAA+TGG - tig0024656:75389-75408 None:intergenic 25.0%
! GATGTAATAGTTAGTTATAC+CGG + tig0024656:75594-75613 Msa1419000:intron 25.0%
! GACAACAACTAATAATTAAC+CGG - tig0024656:75616-75635 None:intergenic 25.0%
! GCTAGTTCGATTTAAATTAT+TGG + tig0024656:76300-76319 Msa1419000:intron 25.0%
! AAAAGAAGAGTTTCGATTTA+GGG - tig0024656:76395-76414 None:intergenic 25.0%
! TTAGACACAATTAGACAATA+GGG - tig0024656:76768-76787 None:intergenic 25.0%
! ATTAGACACAATTAGACAAT+AGG - tig0024656:76769-76788 None:intergenic 25.0%
! TTTAAGAACTATTTATGTCG+TGG + tig0024656:76910-76929 Msa1419000:intron 25.0%
!!! TAATGTTTTTCTGTTTTTGG+TGG + tig0024656:77050-77069 Msa1419000:intron 25.0%
!!! AATGTTTTTCTGTTTTTGGT+GGG + tig0024656:77051-77070 Msa1419000:intron 25.0%
!!! AAACCCTAGCAATTATTTTA+TGG + tig0024656:77142-77161 Msa1419000:three_prime_UTR 25.0%
!!! TTGAGTTTTGTTTGCTTTTT+TGG + tig0024656:77325-77344 Msa1419000:three_prime_UTR 25.0%
GTACGAAAGGAGAATTTATA+TGG - tig0024656:74961-74980 None:intergenic 30.0%
TTTCTGTTCTTCGATTGAAT+CGG - tig0024656:75285-75304 None:intergenic 30.0%
!!! GCAATTTTGATTCGATTTTC+CGG - tig0024656:75347-75366 None:intergenic 30.0%
AATTTCGTTAGTTACTTCAC+AGG + tig0024656:75391-75410 Msa1419000:CDS 30.0%
AAAGAACTAATAGCTTCTTC+CGG + tig0024656:75476-75495 Msa1419000:CDS 30.0%
GAATTTAACGCTCTAACTAA+CGG - tig0024656:75512-75531 None:intergenic 30.0%
! TTAGTTAGAGCGTTAAATTC+AGG + tig0024656:75512-75531 Msa1419000:CDS 30.0%
!! ATCGAATATGGTGGATAAAT+CGG + tig0024656:75869-75888 Msa1419000:CDS 30.0%
TATTCTGTTACAGATTTGTG+AGG + tig0024656:76019-76038 Msa1419000:CDS 30.0%
GCCGAGTAAAAACAAAATTT+AGG - tig0024656:76282-76301 None:intergenic 30.0%
GAAAAGAAGAGTTTCGATTT+AGG - tig0024656:76396-76415 None:intergenic 30.0%
TTCATTATTGTCCAAACATG+TGG - tig0024656:76983-77002 None:intergenic 30.0%
GCACCATAAAATAATTGCTA+GGG - tig0024656:77148-77167 None:intergenic 30.0%
AGCACCATAAAATAATTGCT+AGG - tig0024656:77149-77168 None:intergenic 30.0%
TTGTTAATGTGTAAACATCG+TGG + tig0024656:77190-77209 Msa1419000:three_prime_UTR 30.0%
AGTTTGTGGTGTAAATCATA+CGG + tig0024656:77301-77320 Msa1419000:three_prime_UTR 30.0%
TACATGTGTAACCAAGTCTT+GGG - tig0024656:74917-74936 None:intergenic 35.0%
TTACATGTGTAACCAAGTCT+TGG - tig0024656:74918-74937 None:intergenic 35.0%
GAGAATTTATATGGGAGAGA+GGG - tig0024656:74952-74971 None:intergenic 35.0%
AACAGAGAGTTACACATACA+TGG + tig0024656:75079-75098 Msa1419000:CDS 35.0%
ACAGAGAGTTACACATACAT+GGG + tig0024656:75080-75099 Msa1419000:CDS 35.0%
ATTGCTCGCAAAGAATAAAC+CGG + tig0024656:75325-75344 Msa1419000:CDS 35.0%
CGAATCAAAATTGCTAAAGC+TGG + tig0024656:75353-75372 Msa1419000:CDS 35.0%
CAAAGAGAGATTCAAAATCG+CGG - tig0024656:75444-75463 None:intergenic 35.0%
AACTAACGGTTTAATAGCTC+CGG - tig0024656:75498-75517 None:intergenic 35.0%
TAATAACCTGAGATAGACGA+AGG - tig0024656:75574-75593 None:intergenic 35.0%
GTTCTAACGGTAATGATTAC+AGG + tig0024656:75650-75669 Msa1419000:intron 35.0%
CCTAGAAGATTCACCAATAA+CGG - tig0024656:75717-75736 None:intergenic 35.0%
! GGATTTTGAATCGAATATGG+TGG + tig0024656:75860-75879 Msa1419000:CDS 35.0%
!! TGTTTTGAGTGTGTTGGTAT+CGG + tig0024656:75896-75915 Msa1419000:CDS 35.0%
GGTTCGAATTCTTCATTGAT+TGG + tig0024656:76484-76503 Msa1419000:intron 35.0%
TCTTCCACCAAAGCAATAAA+CGG - tig0024656:76682-76701 None:intergenic 35.0%
AGACAATAGGGCAAAAATTG+CGG - tig0024656:76756-76775 None:intergenic 35.0%
AGAAACTAATTGAGCTTCTG+AGG + tig0024656:77083-77102 Msa1419000:CDS 35.0%
TGGTCAAGAACACAATGAAT+TGG + tig0024656:77210-77229 Msa1419000:three_prime_UTR 35.0%
! GAGAAGCTTTGTAAAGTTTG+TGG + tig0024656:77287-77306 Msa1419000:three_prime_UTR 35.0%
ACATGTGTAACCAAGTCTTG+GGG - tig0024656:74916-74935 None:intergenic 40.0%
GGAGAATTTATATGGGAGAG+AGG - tig0024656:74953-74972 None:intergenic 40.0%
! TAGACGAAGAAGTGTACGAA+AGG - tig0024656:74974-74993 None:intergenic 40.0%
GTTAGGCTTGGAATTAGGTT+CGG - tig0024656:75042-75061 None:intergenic 40.0%
TTTGCGTTAGGCTTGGAATT+AGG - tig0024656:75047-75066 None:intergenic 40.0%
GTAACTCTCTGTTCCCATAT+CGG - tig0024656:75072-75091 None:intergenic 40.0%
! GATGAGGTCATCGGAATTTT+CGG - tig0024656:75237-75256 None:intergenic 40.0%
GATTGAATCGGAGTGAAGAT+CGG - tig0024656:75273-75292 None:intergenic 40.0%
GACCTGCAACTTCAAGAATA+CGG + tig0024656:75413-75432 Msa1419000:CDS 40.0%
CTAACGGTAATGATTACAGG+TGG + tig0024656:75653-75672 Msa1419000:intron 40.0%
ATTACAGGTGGAAGAGAACA+AGG + tig0024656:75665-75684 Msa1419000:intron 40.0%
ATCAGGTGCAATTCCGTTAT+TGG + tig0024656:75701-75720 Msa1419000:CDS 40.0%
CCGTTATTGGTGAATCTTCT+AGG + tig0024656:75714-75733 Msa1419000:CDS 40.0%
! TTGGTGAATCTTCTAGGAAG+TGG + tig0024656:75720-75739 Msa1419000:CDS 40.0%
GTATACTCTGTGTTCTGTGA+AGG + tig0024656:75779-75798 Msa1419000:CDS 40.0%
GAAGGAGAATAAGATGAGAG+CGG + tig0024656:75797-75816 Msa1419000:CDS 40.0%
!! GAAAGTGTTGGTTGAGTTGA+TGG + tig0024656:75836-75855 Msa1419000:CDS 40.0%
!! GGCGGATTTTGAATCGAATA+TGG + tig0024656:75857-75876 Msa1419000:CDS 40.0%
!! GGCTTATGTTTTGAGTGTGT+TGG + tig0024656:75890-75909 Msa1419000:CDS 40.0%
AATAGGGCAAAAATTGCGGT+GGG - tig0024656:76752-76771 None:intergenic 40.0%
TTTGTCGTATGAACGCAATG+AGG - tig0024656:76801-76820 None:intergenic 40.0%
CTATAGTAGTGCCACATGTT+TGG + tig0024656:76969-76988 Msa1419000:intron 40.0%
!!! TTTCTGTTTTTGGTGGGTTC+AGG + tig0024656:77057-77076 Msa1419000:intron 40.0%
TCTGATGTACGTGTAGATCT+TGG - tig0024656:77112-77131 None:intergenic 40.0%
GGAATTAGGTTCGGATGCTA+TGG - tig0024656:75033-75052 None:intergenic 45.0%
CCTAACGCAAACACCGATAT+GGG + tig0024656:75056-75075 Msa1419000:exon 45.0%
GGAAGTTGAATCGTCGTTGA+TGG - tig0024656:75126-75145 None:intergenic 45.0%
ACTGTTGCAGTCACTGAAAG+CGG - tig0024656:75150-75169 None:intergenic 45.0%
! AAGTTGACGGATGAGGTCAT+CGG - tig0024656:75246-75265 None:intergenic 45.0%
! GAAGATCGGAGACAAGTTGA+CGG - tig0024656:75259-75278 None:intergenic 45.0%
AGAACAGAAACAAGCTGCCA+TGG + tig0024656:75295-75314 Msa1419000:CDS 45.0%
TGCGAGCAATCGAATTTCCA+TGG - tig0024656:75315-75334 None:intergenic 45.0%
CACCGTATTCTTGAAGTTGC+AGG - tig0024656:75418-75437 None:intergenic 45.0%
! GTGAATCTTCTAGGAAGTGG+AGG + tig0024656:75723-75742 Msa1419000:CDS 45.0%
TAAGATGAGAGCGGTGAAAG+CGG + tig0024656:75806-75825 Msa1419000:CDS 45.0%
! AGCGGGGATAATGAAAGTGT+TGG + tig0024656:75824-75843 Msa1419000:CDS 45.0%
!! AGTGTTGGTTGAGTTGATGG+CGG + tig0024656:75839-75858 Msa1419000:CDS 45.0%
TCCACAATCTCAACCAACAC+CGG - tig0024656:75963-75982 None:intergenic 45.0%
TTGGTTGAGATTGTGGAGGT+TGG + tig0024656:75966-75985 Msa1419000:CDS 45.0%
GCAGAGACAGAAGGAAATTG+CGG + tig0024656:75992-76011 Msa1419000:CDS 45.0%
ACAGATTTGTGAGGATAGCG+CGG + tig0024656:76028-76047 Msa1419000:CDS 45.0%
CAAAGCAACCAAAGGAGGAA+TGG - tig0024656:76084-76103 None:intergenic 45.0%
CACAAATCGCGCCAAACAAA+AGG + tig0024656:76115-76134 Msa1419000:CDS 45.0%
!! CATGGTGCCGTTTATTGCTT+TGG + tig0024656:76672-76691 Msa1419000:intron 45.0%
CAATAGGGCAAAAATTGCGG+TGG - tig0024656:76753-76772 None:intergenic 45.0%
TGTCGTGGAAGCTTATCATG+CGG + tig0024656:76925-76944 Msa1419000:intron 45.0%
!! ATTTAATATTTAAACTAAAA+TGG - tig0024656:76597-76616 None:intergenic 5.0%
GTAACCAAGTCTTGGGGTGT+AGG - tig0024656:74910-74929 None:intergenic 50.0%
ACTTCTTCGTCTACACACCG+TGG + tig0024656:74981-75000 Msa1419000:five_prime_UTR 50.0%
GGATGCTATGGTTGTGGTTC+GGG - tig0024656:75021-75040 None:intergenic 50.0%
CGGATGCTATGGTTGTGGTT+CGG - tig0024656:75022-75041 None:intergenic 50.0%
AGGTTCGGATGCTATGGTTG+TGG - tig0024656:75027-75046 None:intergenic 50.0%
! ATCGGTGTTTGCGTTAGGCT+TGG - tig0024656:75054-75073 None:intergenic 50.0%
GCCTAACGCAAACACCGATA+TGG + tig0024656:75055-75074 Msa1419000:exon 50.0%
! CCCATATCGGTGTTTGCGTT+AGG - tig0024656:75059-75078 None:intergenic 50.0%
GACTGCAACAGTGACAGATC+CGG + tig0024656:75158-75177 Msa1419000:CDS 50.0%
!! ATCGGAATTTTCGGAAGCGC+AGG - tig0024656:75228-75247 None:intergenic 50.0%
TGCTCTCCTTCGTCTATCTC+AGG + tig0024656:75565-75584 Msa1419000:CDS 50.0%
ACAGGTGGAAGAGAACAAGG+CGG + tig0024656:75668-75687 Msa1419000:intron 50.0%
CTAGGAAGTGGAGGAATACG+CGG + tig0024656:75732-75751 Msa1419000:CDS 50.0%
TAGGAAGTGGAGGAATACGC+GGG + tig0024656:75733-75752 Msa1419000:CDS 50.0%
AAGATGAGAGCGGTGAAAGC+GGG + tig0024656:75807-75826 Msa1419000:CDS 50.0%
! AAGGTTGCGTTGGTGGAAGA+AGG + tig0024656:75930-75949 Msa1419000:CDS 50.0%
!! GGTGTTGGTTGAGATTGTGG+AGG + tig0024656:75962-75981 Msa1419000:CDS 50.0%
GAGACAGAAGGAAATTGCGG+CGG + tig0024656:75995-76014 Msa1419000:CDS 50.0%
!! TGAAGGTGCCATTCCTCCTT+TGG + tig0024656:76073-76092 Msa1419000:CDS 50.0%
TGCGTCAAAGCAACCAAAGG+AGG - tig0024656:76089-76108 None:intergenic 50.0%
GACTGCGTCAAAGCAACCAA+AGG - tig0024656:76092-76111 None:intergenic 50.0%
! TTGGTTGCTTTGACGCAGTC+CGG + tig0024656:76092-76111 Msa1419000:CDS 50.0%
TTGTTTGGCGCGATTTGTGC+CGG - tig0024656:76114-76133 None:intergenic 50.0%
AGCATTGCTCCCTCAACTTG+CGG + tig0024656:76637-76656 Msa1419000:intron 50.0%
!! GGTGCCGTTTATTGCTTTGG+TGG + tig0024656:76675-76694 Msa1419000:intron 50.0%
GCAAGAACAATGAGTCGACG+TGG - tig0024656:76715-76734 None:intergenic 50.0%
!! TGTGGTTCGGGTTGGAGGTT+CGG - tig0024656:75009-75028 None:intergenic 55.0%
!! ATGGTTGTGGTTCGGGTTGG+AGG - tig0024656:75014-75033 None:intergenic 55.0%
! GCTATGGTTGTGGTTCGGGT+TGG - tig0024656:75017-75036 None:intergenic 55.0%
GTTGCAGTCACTGAAAGCGG+AGG - tig0024656:75147-75166 None:intergenic 55.0%
! AGAAGTGGTGGCGAATTCGC+CGG - tig0024656:75180-75199 None:intergenic 55.0%
TCGGGAGGTAGAAGAAGTGG+TGG - tig0024656:75192-75211 None:intergenic 55.0%
TCGTCGGGAGGTAGAAGAAG+TGG - tig0024656:75195-75214 None:intergenic 55.0%
!! AATTTTCGGAAGCGCAGGCG+AGG - tig0024656:75223-75242 None:intergenic 55.0%
! CGGAGACAAGTTGACGGATG+AGG - tig0024656:75253-75272 None:intergenic 55.0%
GAAGAGAACAAGGCGGCGAT+TGG + tig0024656:75675-75694 Msa1419000:CDS 55.0%
AAGGCGGCGATTGGAAGATC+AGG + tig0024656:75684-75703 Msa1419000:CDS 55.0%
TGGAGGAATACGCGGGAAGA+AGG + tig0024656:75740-75759 Msa1419000:CDS 55.0%
AGATGAGAGCGGTGAAAGCG+GGG + tig0024656:75808-75827 Msa1419000:CDS 55.0%
!! GAGTGTGTTGGTATCGGTGC+CGG + tig0024656:75902-75921 Msa1419000:CDS 55.0%
! GTTGCGTTGGTGGAAGAAGG+TGG + tig0024656:75933-75952 Msa1419000:CDS 55.0%
!! GCCGGTGTTGGTTGAGATTG+TGG + tig0024656:75959-75978 Msa1419000:CDS 55.0%
GGTTGGATCGCAGAGACAGA+AGG + tig0024656:75983-76002 Msa1419000:CDS 55.0%
GATTTGTGAGGATAGCGCGG+CGG + tig0024656:76031-76050 Msa1419000:CDS 55.0%
! CGTCAGCTACCGCAAGTTGA+GGG - tig0024656:76649-76668 None:intergenic 55.0%
ACGTCAGCTACCGCAAGTTG+AGG - tig0024656:76650-76669 None:intergenic 55.0%
TTGCGGTAGCTGACGTTGCA+TGG + tig0024656:76654-76673 Msa1419000:intron 55.0%
GCAAAAATTGCGGTGGGTGG+AGG - tig0024656:76746-76765 None:intergenic 55.0%
AGGGCAAAAATTGCGGTGGG+TGG - tig0024656:76749-76768 None:intergenic 55.0%
CGGGAAGAAGGACGCGTCTA+CGG + tig0024656:75752-75771 Msa1419000:CDS 60.0%
!! TGTGTTGGTATCGGTGCCGG+AGG + tig0024656:75905-75924 Msa1419000:CDS 60.0%
ACCAACGCAACCTTCGCCTC+CGG - tig0024656:75924-75943 None:intergenic 60.0%
GGTGGAAGAAGGTGGTGTGC+CGG + tig0024656:75941-75960 Msa1419000:CDS 60.0%
! AGAAGGTGGTGTGCCGGTGT+TGG + tig0024656:75947-75966 Msa1419000:CDS 60.0%
CGATCCATGGTGGCTCGTGA+AGG + tig0024656:76056-76075 Msa1419000:CDS 60.0%
GGGTTGGAGGTTCGGAGCCA+CGG - tig0024656:75001-75020 None:intergenic 65.0%
GCAGGCGAGGAAGAGTCGTC+GGG - tig0024656:75210-75229 None:intergenic 65.0%
CGCAGGCGAGGAAGAGTCGT+CGG - tig0024656:75211-75230 None:intergenic 65.0%
GGAGGCGAAGGTTGCGTTGG+TGG + tig0024656:75923-75942 Msa1419000:CDS 65.0%
TAGCGCGGCGGTTCGATCCA+TGG + tig0024656:76043-76062 Msa1419000:CDS 65.0%
GGCACCTTCACGAGCCACCA+TGG - tig0024656:76063-76082 None:intergenic 65.0%
GGCGAGGAAGAGTCGTCGGG+AGG - tig0024656:75207-75226 None:intergenic 70.0%
!! GGTATCGGTGCCGGAGGCGA+AGG + tig0024656:75911-75930 Msa1419000:CDS 70.0%
GCCGGAGGCGAAGGTTGCGT+TGG + tig0024656:75920-75939 Msa1419000:CDS 70.0%
CGCGGCGGTTCGATCCATGG+TGG + tig0024656:76046-76065 Msa1419000:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0024656 gene 74907 77408 74907 ID=Msa1419000;Name=Msa1419000
tig0024656 mRNA 74907 77408 74907 ID=Msa1419000-mRNA-1;Parent=Msa1419000;Name=Msa1419000-mRNA-1;_AED=0.01;_eAED=0.01;_QI=167|1|1|1|1|1|3|273|344
tig0024656 exon 74907 75586 74907 ID=Msa1419000-mRNA-1:exon:647;Parent=Msa1419000-mRNA-1
tig0024656 exon 75672 76136 75672 ID=Msa1419000-mRNA-1:exon:648;Parent=Msa1419000-mRNA-1
tig0024656 exon 77079 77408 77079 ID=Msa1419000-mRNA-1:exon:649;Parent=Msa1419000-mRNA-1
tig0024656 five_prime_UTR 74907 75073 74907 ID=Msa1419000-mRNA-1:five_prime_utr;Parent=Msa1419000-mRNA-1
tig0024656 CDS 75074 75586 75074 ID=Msa1419000-mRNA-1:cds;Parent=Msa1419000-mRNA-1
tig0024656 CDS 75672 76136 75672 ID=Msa1419000-mRNA-1:cds;Parent=Msa1419000-mRNA-1
tig0024656 CDS 77079 77135 77079 ID=Msa1419000-mRNA-1:cds;Parent=Msa1419000-mRNA-1
tig0024656 three_prime_UTR 77136 77408 77136 ID=Msa1419000-mRNA-1:three_prime_utr;Parent=Msa1419000-mRNA-1
Gene Sequence

>Msa1419000

ATGGGAACAGAGAGTTACACATACATGGGACGAAGTTTCAAAGAATTCACCATCAACGACGATTCAACTTCCTCCGCTTTCAGTGACTGCAACAGTGACAGATCCGGCGAATTCGCCACCACTTCTTCTACCTCCCGACGACTCTTCCTCGCCTGCGCTTCCGAAAATTCCGATGACCTCATCCGTCAACTTGTCTCCGATCTTCACTCCGATTCAATCGAAGAACAGAAACAAGCTGCCATGGAAATTCGATTGCTCGCAAAGAATAAACCGGAAAATCGAATCAAAATTGCTAAAGCTGGCGCGATTAAACCATTAATTTCGTTAGTTACTTCACAGGACCTGCAACTTCAAGAATACGGTGTTACCGCGATTTTGAATCTCTCTTTGTGTGACGAGAATAAAGAACTAATAGCTTCTTCCGGAGCTATTAAACCGTTAGTTAGAGCGTTAAATTCAGGAACATCAACAGCTAAAGAGAACGCTGCTTGTGCTCTCCTTCGTCTATCTCAGGTGGAAGAGAACAAGGCGGCGATTGGAAGATCAGGTGCAATTCCGTTATTGGTGAATCTTCTAGGAAGTGGAGGAATACGCGGGAAGAAGGACGCGTCTACGGCGCTGTATACTCTGTGTTCTGTGAAGGAGAATAAGATGAGAGCGGTGAAAGCGGGGATAATGAAAGTGTTGGTTGAGTTGATGGCGGATTTTGAATCGAATATGGTGGATAAATCGGCTTATGTTTTGAGTGTGTTGGTATCGGTGCCGGAGGCGAAGGTTGCGTTGGTGGAAGAAGGTGGTGTGCCGGTGTTGGTTGAGATTGTGGAGGTTGGATCGCAGAGACAGAAGGAAATTGCGGCGGTTATTCTGTTACAGATTTGTGAGGATAGCGCGGCGGTTCGATCCATGGTGGCTCGTGAAGGTGCCATTCCTCCTTTGGTTGCTTTGACGCAGTCCGGCACAAATCGCGCCAAACAAAAGGCTGAGAAACTAATTGAGCTTCTGAGGCAACCAAGATCTACACGTACATCAGAATGA
Protein sequence

>Msa1419000

MGTESYTYMGRSFKEFTINDDSTSSAFSDCNSDRSGEFATTSSTSRRLFLACASENSDDLIRQLVSDLHSDSIEEQKQAAMEIRLLAKNKPENRIKIAKAGAIKPLISLVTSQDLQLQEYGVTAILNLSLCDENKELIASSGAIKPLVRALNSGTSTAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLGSGGIRGKKDASTALYTLCSVKENKMRAVKAGIMKVLVELMADFESNMVDKSAYVLSVLVSVPEAKVALVEEGGVPVLVEIVEVGSQRQKEIAAVILLQICEDSAAVRSMVAREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSTRTSE*