AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0115190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115190 MtrunA17_Chr1g0176041 98.849 608 4 2 1 605 1 608 0.0 1230
Msa0115190 MtrunA17_Chr3g0121351 71.701 629 129 8 8 605 3 613 0.0 800
Msa0115190 MtrunA17_Chr4g0063551 59.483 580 202 11 8 570 3 566 0.0 634
Msa0115190 MtrunA17_Chr2g0330401 43.880 433 213 8 138 562 83 493 1.60e-112 345
Msa0115190 MtrunA17_Chr6g0449911 43.868 424 218 6 138 558 152 558 4.95e-111 348
Msa0115190 MtrunA17_Chr3g0107851 45.363 399 202 5 135 526 101 490 6.68e-109 338
Msa0115190 MtrunA17_Chr2g0293631 43.427 426 221 7 138 561 483 890 2.47e-101 333
Msa0115190 MtrunA17_Chr4g0076491 39.778 450 245 7 112 544 244 684 2.75e-99 317
Msa0115190 MtrunA17_Chr7g0270131 41.099 455 238 10 114 555 184 621 3.19e-97 314
Msa0115190 MtrunA17_Chr6g0449741 40.330 424 229 6 134 544 232 644 3.21e-97 311
Msa0115190 MtrunA17_Chr1g0157691 39.066 407 227 5 140 539 136 528 1.43e-91 294
Msa0115190 MtrunA17_Chr1g0200181 39.558 407 225 6 140 539 134 526 2.61e-91 293
Msa0115190 MtrunA17_Chr2g0277821 39.659 411 230 5 136 543 489 884 1.05e-86 292
Msa0115190 MtrunA17_Chr4g0058591 41.775 383 201 8 107 484 156 521 3.11e-86 278
Msa0115190 MtrunA17_Chr5g0409981 39.462 446 238 11 127 561 77 501 3.21e-86 278
Msa0115190 MtrunA17_Chr6g0461751 35.266 414 252 5 145 555 134 534 3.25e-78 257
Msa0115190 MtrunA17_Chr5g0442191 38.462 364 207 8 152 514 82 429 9.54e-73 244
Msa0115190 MtrunA17_Chr7g0271121 40.960 354 188 8 175 524 130 466 9.93e-73 248
Msa0115190 MtrunA17_Chr1g0193491 35.408 466 261 13 120 567 87 530 3.03e-71 241
Msa0115190 MtrunA17_Chr3g0095031 39.595 346 192 7 172 516 111 440 1.47e-69 235
Msa0115190 MtrunA17_Chr6g0483491 34.615 390 235 6 149 537 8 378 1.21e-64 218
Msa0115190 MtrunA17_Chr7g0236841 32.880 441 265 9 149 580 8 426 3.37e-64 217
Msa0115190 MtrunA17_Chr2g0300291 37.403 385 210 9 150 525 140 502 1.98e-62 219
Msa0115190 MtrunA17_Chr3g0098121 36.856 388 207 7 150 525 151 512 2.37e-62 219
Msa0115190 MtrunA17_Chr7g0263771 31.042 451 279 8 99 540 75 502 1.43e-61 215
Msa0115190 MtrunA17_Chr2g0297261 30.976 410 251 9 132 536 17 399 6.52e-57 197
Msa0115190 MtrunA17_Chr2g0310581 33.333 402 241 8 134 529 36 416 8.74e-57 199
Msa0115190 MtrunA17_Chr4g0070981 31.701 388 245 5 150 537 40 407 1.19e-55 194
Msa0115190 MtrunA17_Chr2g0299681 30.345 435 267 8 104 537 8 407 2.18e-55 193
Msa0115190 MtrunA17_Chr4g0040761 34.987 383 221 9 152 524 20 384 4.47e-55 199
Msa0115190 MtrunA17_Chr6g0475251 34.383 381 225 9 150 522 102 465 7.37e-55 197
Msa0115190 MtrunA17_Chr8g0342861 30.926 443 254 11 104 537 8 407 1.25e-54 191
Msa0115190 MtrunA17_Chr1g0204391 35.101 396 216 12 143 514 36 414 2.32e-54 194
Msa0115190 MtrunA17_Chr2g0329931 31.066 441 256 11 104 537 8 407 3.19e-54 190
Msa0115190 MtrunA17_Chr3g0114081 35.635 362 195 10 174 513 39 384 8.99e-53 190
Msa0115190 MtrunA17_Chr7g0236831 29.434 530 295 13 121 588 136 648 2.55e-51 189
Msa0115190 MtrunA17_Chr4g0003441 35.143 350 204 7 170 516 127 456 8.76e-51 182
Msa0115190 MtrunA17_Chr8g0386451 35.509 383 222 13 170 535 307 681 1.40e-50 186
Msa0115190 MtrunA17_Chr7g0247191 31.215 362 225 7 150 510 149 487 5.31e-50 181
Msa0115190 MtrunA17_Chr6g0466611 31.436 404 261 9 149 545 140 534 6.60e-50 184
Msa0115190 MtrunA17_Chr7g0247221 31.215 362 225 8 150 510 142 480 1.67e-49 179
Msa0115190 MtrunA17_Chr7g0247181 31.215 362 225 8 150 510 139 477 2.78e-49 179
Msa0115190 MtrunA17_Chr1g0149251 36.145 332 189 7 189 517 2 313 8.75e-49 173
Msa0115190 MtrunA17_Chr8g0347161 34.375 352 212 10 165 507 116 457 1.31e-48 178
Msa0115190 MtrunA17_Chr8g0347151 35.925 373 219 10 163 524 213 576 1.20e-47 177
Msa0115190 MtrunA17_Chr4g0034411 31.566 415 246 9 148 542 73 469 1.82e-47 177
Msa0115190 MtrunA17_Chr5g0443991 31.807 415 245 11 148 542 73 469 8.18e-46 172
Msa0115190 MtrunA17_Chr8g0347171 33.516 364 225 10 152 507 161 515 1.13e-44 168
Msa0115190 MtrunA17_Chr4g0062301 33.038 339 196 9 174 502 120 437 2.74e-43 163
Msa0115190 MtrunA17_Chr2g0307471 31.332 383 234 8 151 524 91 453 5.45e-43 162
Msa0115190 MtrunA17_Chr2g0301281 29.186 442 236 13 151 524 41 473 9.30e-43 162
Msa0115190 MtrunA17_Chr4g0029191 28.450 471 257 15 151 553 44 502 1.12e-42 162
Msa0115190 MtrunA17_Chr2g0309551 27.051 451 284 9 118 529 82 526 4.18e-36 142
Msa0115190 MtrunA17_Chr1g0179761 29.358 436 244 15 115 514 40 447 9.01e-36 140
Msa0115190 MtrunA17_Chr3g0145781 29.340 409 240 15 149 526 130 520 1.66e-34 137
Msa0115190 MtrunA17_Chr1g0192021 27.187 423 246 10 139 514 11 418 5.50e-33 134
Msa0115190 MtrunA17_Chr5g0429221 27.419 372 240 9 149 514 1 348 2.49e-29 120
Msa0115190 MtrunA17_Chr4g0074521 30.303 396 226 13 136 502 67 441 1.89e-28 119
Msa0115190 MtrunA17_Chr3g0137901 42.424 132 69 1 386 517 25 149 1.14e-26 107
Msa0115190 MtrunA17_Chr1g0169331 25.000 400 245 10 172 536 12 391 5.05e-26 110
Msa0115190 MtrunA17_Chr4g0004301 25.187 401 217 10 188 524 70 451 4.35e-24 106
Msa0115190 MtrunA17_Chr8g0349951 34.591 159 94 3 149 306 8 157 2.69e-23 96.7
Msa0115190 MtrunA17_Chr4g0039471 31.579 209 124 4 151 355 223 416 6.01e-23 101
Msa0115190 MtrunA17_Chr4g0039471 29.952 207 93 6 151 357 2 156 2.80e-17 84.7
Msa0115190 MtrunA17_Chr5g0434301 24.938 401 218 10 188 524 70 451 8.86e-23 102
Msa0115190 MtrunA17_Chr8g0342851 24.033 362 221 6 180 537 2 313 1.42e-22 99.0
Msa0115190 MtrunA17_Chr4g0062321 32.018 228 132 7 261 480 23 235 3.81e-21 93.2
Msa0115190 MtrunA17_Chr1g0155201 29.299 314 182 12 281 579 14 302 1.97e-19 90.1
Msa0115190 MtrunA17_Chr8g0354761 25.762 361 225 10 174 518 31 364 2.69e-19 90.9
Msa0115190 MtrunA17_Chr4g0025141 33.333 189 105 5 339 514 15 195 5.91e-19 86.7
Msa0115190 MtrunA17_Chr3g0137891 34.463 177 101 5 189 363 2 165 8.84e-18 82.8
Msa0115190 MtrunA17_Chr8g0364251 33.951 162 95 5 377 533 400 554 1.37e-17 86.7
Msa0115190 MtrunA17_Chr8g0364251 25.641 234 144 8 111 330 59 276 4.66e-11 65.9
Msa0115190 MtrunA17_Chr0c30g0494091 31.441 229 135 6 136 354 67 283 6.86e-16 80.1
Msa0115190 MtrunA17_Chr4g0058601 46.269 67 36 0 474 540 9 75 4.14e-14 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115190 AT2G42520.2 73.814 569 119 7 7 553 2 562 0.0 822
Msa0115190 AT2G42520.1 73.814 569 119 7 7 553 2 562 0.0 822
Msa0115190 AT2G42520.3 73.814 569 119 7 7 553 2 562 0.0 822
Msa0115190 AT3G58570.1 73.022 556 136 5 5 553 1 549 0.0 791
Msa0115190 AT3G58510.1 71.649 582 129 10 7 569 2 566 0.0 775
Msa0115190 AT3G58510.3 71.649 582 129 10 7 569 2 566 0.0 775
Msa0115190 AT3G58510.2 71.649 582 129 10 7 569 2 566 0.0 775
Msa0115190 AT5G63120.2 46.229 411 195 8 135 540 152 541 3.47e-114 353
Msa0115190 AT1G55150.1 42.459 431 221 7 138 560 87 498 1.50e-111 343
Msa0115190 AT1G55150.2 42.691 431 220 8 138 560 112 523 1.03e-110 342
Msa0115190 AT5G14610.2 44.391 419 212 7 138 554 149 548 3.21e-109 342
Msa0115190 AT5G14610.6 44.391 419 212 7 138 554 149 548 3.83e-109 342
Msa0115190 AT5G14610.5 44.391 419 212 7 138 554 157 556 6.67e-109 341
Msa0115190 AT3G01540.1 44.869 419 210 7 138 554 146 545 5.30e-108 338
Msa0115190 AT3G01540.4 44.869 419 210 7 138 554 146 545 5.99e-108 338
Msa0115190 AT3G01540.2 44.869 419 210 7 138 554 146 545 5.99e-108 338
Msa0115190 AT3G01540.3 44.869 419 210 7 138 554 146 545 5.99e-108 338
Msa0115190 AT5G14610.7 45.736 387 189 7 170 554 50 417 3.03e-103 322
Msa0115190 AT5G14610.3 45.736 387 189 7 170 554 50 417 3.03e-103 322
Msa0115190 AT5G14610.1 44.146 410 208 7 147 554 226 616 1.55e-102 327
Msa0115190 AT3G06480.1 43.415 410 213 6 138 545 423 815 9.83e-98 322
Msa0115190 AT2G47330.1 41.822 428 228 7 120 545 202 610 9.76e-95 307
Msa0115190 AT2G33730.1 39.387 424 235 5 134 544 297 711 2.42e-94 305
Msa0115190 AT5G51280.1 39.558 407 225 6 140 539 136 528 1.46e-91 294
Msa0115190 AT1G20920.2 38.592 412 235 4 135 543 176 572 1.70e-90 298
Msa0115190 AT4G33370.1 38.537 410 229 6 138 539 85 479 2.59e-90 290
Msa0115190 AT1G20920.4 38.835 412 234 5 135 543 514 910 8.17e-89 299
Msa0115190 AT1G20920.6 38.835 412 234 5 135 543 514 910 8.17e-89 299
Msa0115190 AT1G20920.3 38.835 412 234 5 135 543 514 910 8.17e-89 299
Msa0115190 AT1G20920.7 38.835 412 234 5 135 543 514 910 8.17e-89 299
Msa0115190 AT1G20920.5 38.835 412 234 5 135 543 514 910 8.17e-89 299
Msa0115190 AT1G20920.1 38.835 412 234 5 135 543 514 910 8.17e-89 299
Msa0115190 AT5G63120.1 45.640 344 161 8 135 473 152 474 2.30e-88 283
Msa0115190 AT5G63120.3 45.640 344 161 8 135 473 152 474 2.63e-88 282
Msa0115190 AT5G63120.4 45.640 344 161 8 135 473 152 474 2.63e-88 282
Msa0115190 AT5G63120.5 45.640 344 161 8 135 473 152 474 2.63e-88 282
Msa0115190 AT1G31970.1 39.480 423 224 10 149 561 115 515 6.02e-85 275
Msa0115190 AT5G14610.4 43.235 340 174 6 138 475 157 479 8.53e-83 268
Msa0115190 AT3G02065.3 35.322 419 258 5 135 552 95 501 2.31e-78 257
Msa0115190 AT3G02065.2 35.322 419 258 5 135 552 95 501 2.31e-78 257
Msa0115190 AT3G09620.1 37.284 405 207 6 135 536 381 741 2.78e-77 265
Msa0115190 AT3G09620.2 37.284 405 207 6 135 536 382 742 3.30e-77 265
Msa0115190 AT3G06480.2 43.228 347 178 6 138 482 423 752 3.64e-77 261
Msa0115190 AT1G28180.1 40.701 371 194 6 180 544 3 353 3.70e-77 249
Msa0115190 AT5G60990.1 34.521 449 268 6 149 582 8 445 1.60e-73 243
Msa0115190 AT3G22330.1 36.856 369 212 7 172 537 126 476 8.80e-70 237
Msa0115190 AT5G26742.1 38.522 379 210 8 152 524 104 465 1.93e-69 239
Msa0115190 AT5G26742.2 38.522 379 210 8 152 524 104 465 1.97e-69 239
Msa0115190 AT3G22310.2 35.864 382 224 8 172 550 138 501 9.56e-69 234
Msa0115190 AT3G22310.1 35.864 382 224 8 172 550 138 501 1.30e-68 234
Msa0115190 AT3G02065.1 34.492 374 232 5 180 552 3 364 1.53e-68 227
Msa0115190 AT5G26742.3 40.227 353 188 8 178 524 37 372 4.90e-67 231
Msa0115190 AT3G09720.2 30.870 460 287 9 86 539 76 510 2.94e-65 223
Msa0115190 AT3G09720.1 30.870 460 287 9 86 539 76 510 2.94e-65 223
Msa0115190 AT4G16630.1 35.765 425 247 8 108 525 123 528 2.81e-64 226
Msa0115190 AT1G16280.1 35.598 368 213 7 165 526 70 419 7.12e-61 210
Msa0115190 AT1G51380.1 29.798 396 252 6 148 540 20 392 6.51e-58 199
Msa0115190 AT3G19760.1 29.923 391 250 6 148 536 33 401 1.30e-57 199
Msa0115190 AT1G77030.1 34.293 382 225 7 152 524 30 394 7.16e-56 203
Msa0115190 AT1G72730.1 31.328 399 254 5 139 537 30 408 1.07e-54 191
Msa0115190 AT3G13920.1 30.805 435 264 8 104 537 8 406 1.51e-54 191
Msa0115190 AT3G13920.2 30.935 417 253 8 104 520 8 389 6.69e-54 189
Msa0115190 AT3G13920.5 30.935 417 253 8 104 520 12 393 1.01e-53 189
Msa0115190 AT4G00660.1 31.215 362 225 7 150 510 131 469 1.57e-53 191
Msa0115190 AT4G00660.2 31.215 362 225 7 150 510 131 469 1.57e-53 191
Msa0115190 AT1G54270.1 30.734 436 263 9 104 537 8 406 1.85e-53 188
Msa0115190 AT3G13920.3 30.882 408 250 7 130 537 21 396 2.11e-53 187
Msa0115190 AT1G54270.2 33.245 379 228 8 161 537 46 401 2.30e-53 187
Msa0115190 AT3G13920.4 30.184 434 263 10 104 537 8 401 3.20e-53 187
Msa0115190 AT2G45810.1 31.492 362 224 6 150 510 154 492 3.74e-52 187
Msa0115190 AT5G11170.1 35.549 346 200 7 170 512 66 391 1.61e-51 183
Msa0115190 AT5G11200.1 35.549 346 200 7 170 512 66 391 1.61e-51 183
Msa0115190 AT3G61240.2 30.663 362 227 6 150 510 124 462 2.72e-51 184
Msa0115190 AT3G61240.1 30.663 362 227 6 150 510 124 462 2.72e-51 184
Msa0115190 AT5G05450.1 35.279 394 212 15 139 513 13 382 4.76e-51 186
Msa0115190 AT4G09730.1 31.387 411 259 9 149 546 111 511 9.87e-51 185
Msa0115190 AT1G71370.1 34.783 391 225 12 134 513 2 373 5.63e-50 182
Msa0115190 AT5G08610.1 35.613 351 209 8 165 507 397 738 5.39e-48 180
Msa0115190 AT5G11170.2 35.780 327 187 7 189 512 2 308 4.04e-47 169
Msa0115190 AT5G08620.1 34.699 366 211 11 174 524 104 456 2.14e-46 172
Msa0115190 AT5G11200.3 32.817 387 196 9 170 512 66 432 2.31e-46 170
Msa0115190 AT5G62190.1 33.046 348 224 5 175 522 121 459 3.75e-46 173
Msa0115190 AT5G54910.1 32.614 417 236 13 149 542 70 464 4.27e-46 174
Msa0115190 AT5G65900.1 33.983 359 212 8 150 502 154 493 6.34e-46 172
Msa0115190 AT5G11200.2 30.864 405 198 9 170 512 66 450 6.66e-46 169
Msa0115190 AT1G63250.1 35.159 347 205 9 171 507 349 685 2.26e-44 169
Msa0115190 AT5G63630.1 34.844 353 209 8 165 507 69 410 2.76e-44 166
Msa0115190 AT5G63630.2 34.844 353 209 8 165 507 263 604 3.22e-44 168
Msa0115190 AT2G40700.1 28.668 443 239 11 151 524 31 465 4.34e-44 166
Msa0115190 AT3G18600.1 30.667 375 239 8 131 502 71 427 7.33e-43 162
Msa0115190 AT2G07750.1 34.682 346 208 9 171 507 396 732 8.43e-43 165
Msa0115190 AT3G16840.1 28.510 463 254 12 116 513 156 606 2.99e-41 160
Msa0115190 AT3G16840.2 29.138 429 227 12 150 513 191 607 1.40e-40 158
Msa0115190 AT3G53110.1 30.562 409 220 14 135 514 76 449 9.25e-40 152
Msa0115190 AT1G12770.2 26.403 481 288 12 96 524 56 522 1.10e-36 144
Msa0115190 AT1G12770.1 26.403 481 288 12 96 524 56 522 1.10e-36 144
Msa0115190 AT3G06980.1 31.122 392 222 15 151 513 375 747 2.94e-34 139
Msa0115190 AT1G71280.2 32.958 355 179 13 134 476 2 309 5.64e-34 132
Msa0115190 AT1G71280.1 32.687 361 182 15 134 481 2 314 1.03e-33 134
Msa0115190 AT4G34910.1 27.525 396 234 8 150 503 46 430 1.24e-29 124
Msa0115190 AT1G51380.2 28.287 251 161 4 148 397 20 252 2.45e-26 109
Msa0115190 AT5G19210.2 28.650 363 205 13 170 502 96 434 3.57e-26 112
Msa0115190 AT1G51380.4 29.439 214 135 3 148 360 20 218 1.50e-25 107
Msa0115190 AT4G15850.1 26.768 396 204 15 188 518 73 447 2.46e-25 110
Msa0115190 AT1G51380.3 29.439 214 135 3 148 360 20 218 2.71e-25 107
Msa0115190 AT1G28180.2 44.828 116 62 1 180 295 3 116 1.19e-22 94.0
Msa0115190 AT5G19210.1 27.236 246 141 9 281 502 46 277 6.05e-15 76.6
Msa0115190 AT5G19210.3 27.236 246 141 9 281 502 46 277 6.05e-15 76.6
Msa0115190 AT1G59990.2 32.773 119 77 2 412 529 427 543 1.34e-13 74.3
Msa0115190 AT1G59990.1 32.773 119 77 2 412 529 427 543 1.36e-13 74.3

Find 231 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCTAGTTATATCTTTC+TGG 0.065066 1_3:+33965296 Msa0115190:CDS
TTAATATGTGCATGCTAATT+AGG 0.082344 1_3:-33967405 None:intergenic
ATAGGGGTTTGGGTAATAAT+TGG 0.216352 1_3:+33962534 Msa0115190:CDS
ACAAATTACCTGTATCTCTT+TGG 0.227870 1_3:-33963617 None:intergenic
TCCGGCCGAGCCACCTTCTT+TGG 0.231327 1_3:+33962502 Msa0115190:CDS
GGAGGATACGGTGGTGGTGG+TGG 0.242514 1_3:+33962608 Msa0115190:CDS
ACGTTTGCGGAAATAGATTT+AGG 0.245357 1_3:+33962824 Msa0115190:CDS
TTGGCTGTATGTAACTTAAT+AGG 0.280325 1_3:+33967531 Msa0115190:three_prime_UTR
AGCAGATCGGATGCTGGATA+TGG 0.291721 1_3:+33963504 Msa0115190:CDS
AGTAAGGAATGCATGGATTT+AGG 0.296210 1_3:-33967182 None:intergenic
TAATATGTGCATGCTAATTA+GGG 0.298326 1_3:-33967404 None:intergenic
CTTCTTTGGTGGCTAATGAT+AGG 0.307197 1_3:+33962516 Msa0115190:CDS
AACAGGACGAGCTGGTAAAA+TGG 0.309296 1_3:+33966766 Msa0115190:CDS
TCAACTATCTTTCTTATTTG+AGG 0.314818 1_3:-33963535 None:intergenic
TGAGAGAGGTGTTGATATTC+TGG 0.320367 1_3:+33963399 Msa0115190:CDS
ACAGCCAACCGAGATAAAAT+TGG 0.324225 1_3:-33967516 None:intergenic
TGCTTCATCGGCGGCGCGCC+CGG 0.324243 1_3:+33962430 Msa0115190:CDS
TGTTTGATAAGAAAACTTCT+TGG 0.325171 1_3:-33963212 None:intergenic
TAGGGGTTTGGGTAATAATT+GGG 0.327406 1_3:+33962535 Msa0115190:CDS
GCTATACCGATTTCGCTTGC+TGG 0.327789 1_3:+33962911 Msa0115190:CDS
GGTGGCTAATGATAGGGGTT+TGG 0.328176 1_3:+33962523 Msa0115190:CDS
GCTTGCTGGGAGAGATTTGA+TGG 0.333161 1_3:+33962925 Msa0115190:CDS
TACGGTGGTGGTGGTGGGTT+TGG 0.336015 1_3:+33962614 Msa0115190:CDS
CGATTATAAGCGGAATCCTT+AGG 0.336460 1_3:+33962993 Msa0115190:CDS
TTTCCTGCAACTTGCATTCA+TGG 0.338462 1_3:+33965708 Msa0115190:CDS
CAAATTACCTGTATCTCTTT+GGG 0.339534 1_3:-33963616 None:intergenic
GCTTGTGCTCAGACGGGTTC+AGG 0.340784 1_3:+33962947 Msa0115190:CDS
GTCAAGGTCGTAGTTGCTTA+TGG 0.341012 1_3:+33963238 Msa0115190:CDS
TTCTTTGGTGGCTAATGATA+GGG 0.344987 1_3:+33962517 Msa0115190:CDS
TGTAACAAGTGCTTGGGATT+AGG 0.346044 1_3:+33967066 Msa0115190:CDS
GGGTGTAAACTATATTGTTT+TGG 0.348976 1_3:+33967287 Msa0115190:three_prime_UTR
GGGGAATGGGAGGGAGCGTG+TGG 0.349109 1_3:+33962658 Msa0115190:CDS
GGTGGTGGTGGTGGGTTTGG+TGG 0.350227 1_3:+33962617 Msa0115190:CDS
ACCATACCCTCCGCCATAAC+TGG 0.352232 1_3:-33967038 None:intergenic
CACATAATCATCAATGTCAT+TGG 0.353409 1_3:-33966729 None:intergenic
GAGGAGGAGCGGGGAATGGG+AGG 0.354579 1_3:+33962648 Msa0115190:CDS
AATGGGAGGGAGCGTGTGGG+TGG 0.354702 1_3:+33962662 Msa0115190:CDS
ACATCCGTTGCCACTAGAAT+TGG 0.361842 1_3:-33966650 None:intergenic
TGGATTTGCTTGAGAGGGCT+AGG 0.362367 1_3:+33963443 Msa0115190:CDS
GTGGCTAATGATAGGGGTTT+GGG 0.364803 1_3:+33962524 Msa0115190:CDS
CGCTAATTCATTCTCATGTT+GGG 0.367537 1_3:+33967101 Msa0115190:three_prime_UTR
GGTGGAAACGGTGGTGGTTA+TGG 0.369732 1_3:+33967007 Msa0115190:CDS
AACATCACGGCCACCAAAAC+GGG 0.371256 1_3:-33966945 None:intergenic
GGCGGCGCGCCCGGTCAAGC+CGG 0.376057 1_3:+33962439 Msa0115190:CDS
AATAAAGGAAATGATTACTA+TGG 0.381802 1_3:+33966986 Msa0115190:CDS
GGAACATAAGCCGGCTTGAC+CGG 0.382007 1_3:-33962449 None:intergenic
GACAAAGATTTCCTGTAGTA+AGG 0.382851 1_3:-33967198 None:intergenic
AGTTATATCTTTCTGGCTGT+TGG 0.386936 1_3:+33965303 Msa0115190:CDS
AGGTCTGACTTTAGTGTTTG+TGG 0.388354 1_3:+33965635 Msa0115190:CDS
TTTCTGGCTGTTGGAAGGGT+TGG 0.391022 1_3:+33965312 Msa0115190:CDS
CTTTGTCAATGATCCACAAC+TGG 0.399349 1_3:+33967214 Msa0115190:three_prime_UTR
CACTTATCCTGTCCCCTACT+CGG 0.400465 1_3:+33963065 Msa0115190:CDS
GTGGTAGAAACAAGCGGACT+GGG 0.409015 1_3:+33966918 Msa0115190:CDS
CTAAGGATTCCGCTTATAAT+CGG 0.410751 1_3:-33962992 None:intergenic
TCGCCATGAATGCAAGTTGC+AGG 0.411185 1_3:-33965711 None:intergenic
TCTCTCCCAGCAAGCGAAAT+CGG 0.417914 1_3:-33962917 None:intergenic
AAGGAGAGCTCATATAATAA+AGG 0.419864 1_3:+33966971 Msa0115190:CDS
ATATTACTGGTTTATGTTGT+GGG 0.422901 1_3:+33967326 Msa0115190:three_prime_UTR
GAGGATACGGTGGTGGTGGT+GGG 0.427768 1_3:+33962609 Msa0115190:CDS
GGGAGGGAGCGTGTGGGTGG+AGG 0.429438 1_3:+33962665 Msa0115190:CDS
GGGTTTAACAGAGGAGGAGC+GGG 0.430268 1_3:+33962638 Msa0115190:CDS
AGGAGTCCTTGCTGCATAAC+GGG 0.432387 1_3:-33966888 None:intergenic
CTCGTCCTGTTCTTCCTATC+CGG 0.432877 1_3:-33966754 None:intergenic
GCCAGTTATGGCGGAGGGTA+TGG 0.434353 1_3:+33967037 Msa0115190:CDS
GAACACTGCTTGTGTGTTAA+CGG 0.434525 1_3:+33965684 Msa0115190:CDS
AACACTGCTTGTGTGTTAAC+GGG 0.434919 1_3:+33965685 Msa0115190:CDS
CAAATTACTGTCATTGAAGA+AGG 0.435697 1_3:-33966801 None:intergenic
ACAGAGGAGGAGCGGGGAAT+GGG 0.437491 1_3:+33962645 Msa0115190:CDS
AAGAAAGATAGTTGAACAAA+TGG 0.437695 1_3:+33963543 Msa0115190:CDS
TACTCGGGAGCTCTCTTGTC+AGG 0.438746 1_3:+33963081 Msa0115190:CDS
ACCAAAGAAGGTGGCTCGGC+CGG 0.440213 1_3:-33962503 None:intergenic
TAACATCACGGCCACCAAAA+CGG 0.440534 1_3:-33966946 None:intergenic
TCGCTAATTCATTCTCATGT+TGG 0.441868 1_3:+33967100 Msa0115190:three_prime_UTR
TATGGTGTTCCTGCCAGTTA+TGG 0.448820 1_3:+33967025 Msa0115190:CDS
GATATTACTGGTTTATGTTG+TGG 0.448938 1_3:+33967325 Msa0115190:three_prime_UTR
AACATTTCCCAAAGAGATAC+AGG 0.451243 1_3:+33963609 Msa0115190:CDS
ATATCTTTCTGGCTGTTGGA+AGG 0.455309 1_3:+33965307 Msa0115190:CDS
GGTGGAGGATACGGTGGTGG+TGG 0.456825 1_3:+33962605 Msa0115190:CDS
CAATGACAGTAATTTGTCAA+TGG 0.461949 1_3:+33966808 Msa0115190:CDS
GTATTCTCTTGCTCAGTAAA+CGG 0.462472 1_3:-33962728 None:intergenic
GGCCGAGCCACCTTCTTTGG+TGG 0.465097 1_3:+33962505 Msa0115190:CDS
ACAGGACGAGCTGGTAAAAT+GGG 0.466923 1_3:+33966767 Msa0115190:CDS
GTTTACTGAGCAAGAGAATA+CGG 0.468139 1_3:+33962730 Msa0115190:CDS
GATTATAAGCGGAATCCTTA+GGG 0.468514 1_3:+33962994 Msa0115190:CDS
AACAGAGGAGGAGCGGGGAA+TGG 0.469033 1_3:+33962644 Msa0115190:CDS
TTTGGGGCTGGGAGACAAGT+AGG 0.470337 1_3:+33962584 Msa0115190:CDS
GTGGTGGTGGTGGGTTTGGT+GGG 0.472131 1_3:+33962618 Msa0115190:CDS
GATATTCTGGTGGCAACTCC+AGG 0.472374 1_3:+33963412 Msa0115190:CDS
GTCAAGGTGTAACAAGTGCT+TGG 0.472671 1_3:+33967059 Msa0115190:CDS
TATGCAGCAAGGACTCCTTA+TGG 0.473458 1_3:+33966893 Msa0115190:CDS
GCCTCCCGTGAATACGTTTG+CGG 0.476065 1_3:+33962811 Msa0115190:CDS
TAACCGATCAATGGCTGCTC+CGG 0.476102 1_3:+33962484 Msa0115190:CDS
TTTGTCAATGGCTAAACCAT+TGG 0.477577 1_3:+33966820 Msa0115190:CDS
GACAAGAGAGCTCCCGAGTA+GGG 0.479748 1_3:-33963078 None:intergenic
ATCCATGCATTCCTTACTAC+AGG 0.480935 1_3:+33967187 Msa0115190:three_prime_UTR
TATCTTTCTGGCTGTTGGAA+GGG 0.484079 1_3:+33965308 Msa0115190:CDS
TTTGATGGCTTGTGCTCAGA+CGG 0.484435 1_3:+33962940 Msa0115190:CDS
GAAGAAAGGTGCTGATGCAT+TGG 0.489379 1_3:+33965662 Msa0115190:CDS
GGTGGTAGAAACAAGCGGAC+TGG 0.489930 1_3:+33966917 Msa0115190:CDS
CAATGCAGCTAATGCTTCAT+CGG 0.492532 1_3:+33962418 Msa0115190:CDS
AAAGGAAATGATTACTATGG+TGG 0.493627 1_3:+33966989 Msa0115190:CDS
CAACTTTGAGAACAGCTACA+TGG 0.493651 1_3:+33962381 Msa0115190:CDS
GGTAGTTATTAATGAAGTGT+AGG 0.495637 1_3:-33967456 None:intergenic
GTCTGTCTCATGCCTGGAGG+AGG 0.495808 1_3:-33963571 None:intergenic
GTGCACCGGATAGGAAGAAC+AGG 0.496326 1_3:+33966749 Msa0115190:CDS
CTATACCGATTTCGCTTGCT+GGG 0.497481 1_3:+33962912 Msa0115190:CDS
GCAGATCGGATGCTGGATAT+GGG 0.498479 1_3:+33963505 Msa0115190:CDS
AGGAGGAGCGGGGAATGGGA+GGG 0.498506 1_3:+33962649 Msa0115190:CDS
AGCAGCGTCTGTCTCATGCC+TGG 0.502465 1_3:-33963577 None:intergenic
GCATAACGGGTGAGCCATGC+AGG 0.503294 1_3:-33966875 None:intergenic
TTGTTTCTACCACCACCATA+AGG 0.503855 1_3:-33966908 None:intergenic
ACATAATCATCAATGTCATT+GGG 0.504262 1_3:-33966728 None:intergenic
TTCTTATCAAACAGGGGTCA+AGG 0.505657 1_3:+33963222 Msa0115190:CDS
AGAGCTCCCGAGTAGGGGAC+AGG 0.509263 1_3:-33963072 None:intergenic
GTTTGAAATTCTGTAGAAGA+GGG 0.512689 1_3:+33967263 Msa0115190:three_prime_UTR
TCATCAACATCATTCTCAAA+CGG 0.513975 1_3:-33962704 None:intergenic
CTATCATTAGCCACCAAAGA+AGG 0.514585 1_3:-33962515 None:intergenic
GAACATAAGCCGGCTTGACC+GGG 0.516012 1_3:-33962448 None:intergenic
AGCAAATCCACCAATCGTCC+TGG 0.519237 1_3:-33963430 None:intergenic
GGTATAGCATACCTCTGAAC+CGG 0.519441 1_3:-33962896 None:intergenic
AGGAGCACCGATCACCCAAC+AGG 0.519807 1_3:+33963261 Msa0115190:CDS
GGATTTGCTTGAGAGGGCTA+GGG 0.520609 1_3:+33963444 Msa0115190:CDS
GATTGGTGGATTTGCTTGAG+AGG 0.520897 1_3:+33963437 Msa0115190:CDS
GTAGTTATTAATGAAGTGTA+GGG 0.522761 1_3:-33967455 None:intergenic
GGTGGCAACTCCAGGACGAT+TGG 0.523074 1_3:+33963420 Msa0115190:CDS
AGACAAGTAGGTGGAGGATA+CGG 0.524332 1_3:+33962596 Msa0115190:CDS
GCATCTTCGTAACCGATCAA+TGG 0.526310 1_3:+33962475 Msa0115190:CDS
TTTACTGAGCAAGAGAATAC+GGG 0.527137 1_3:+33962731 Msa0115190:CDS
TGATGAAGCAGATCGGATGC+TGG 0.527612 1_3:+33963498 Msa0115190:CDS
GGGTTTGGTGGGTTTAACAG+AGG 0.527684 1_3:+33962629 Msa0115190:CDS
GATGATTATGTGCACCGGAT+AGG 0.527907 1_3:+33966740 Msa0115190:CDS
CAGCAAAAGCAAACCAGTTG+TGG 0.528401 1_3:-33967227 None:intergenic
TTCCTGTAGTAAGGAATGCA+TGG 0.531327 1_3:-33967189 None:intergenic
CGGCCGGAGCAGCCATTGAT+CGG 0.531645 1_3:-33962487 None:intergenic
CAAATGGACATGCCTCCTCC+AGG 0.531714 1_3:+33963559 Msa0115190:CDS
TCAAGGTGTAACAAGTGCTT+GGG 0.532427 1_3:+33967060 Msa0115190:CDS
AAGGAGTCCTTGCTGCATAA+CGG 0.532448 1_3:-33966889 None:intergenic
TTTATGGATCCTTCTAGGAA+AGG 0.536418 1_3:-33967492 None:intergenic
TTCTCCCCACTTGTCTCCAC+AGG 0.537099 1_3:-33962782 None:intergenic
GTTCCTGCCAGTTATGGCGG+AGG 0.540492 1_3:+33967031 Msa0115190:CDS
AGGGGTTTGGGTAATAATTG+GGG 0.545276 1_3:+33962536 Msa0115190:CDS
TTGATGGCTTGTGCTCAGAC+GGG 0.545968 1_3:+33962941 Msa0115190:CDS
GTGTTTGTGGAAACGAAGAA+AGG 0.546167 1_3:+33965648 Msa0115190:CDS
TACCCTCCGCCATAACTGGC+AGG 0.546471 1_3:-33967034 None:intergenic
TATTTCCGCAAACGTATTCA+CGG 0.546694 1_3:-33962816 None:intergenic
ACTTATCCTGTCCCCTACTC+GGG 0.548623 1_3:+33963066 Msa0115190:CDS
TCTTTGGTGGCTAATGATAG+GGG 0.550688 1_3:+33962518 Msa0115190:CDS
AATGATTACTATGGTGGAAA+CGG 0.551471 1_3:+33966995 Msa0115190:CDS
GGCAACTCCAGGACGATTGG+TGG 0.553332 1_3:+33963423 Msa0115190:CDS
TTTATGTTGTGGGTAGTATG+TGG 0.553930 1_3:+33967336 Msa0115190:three_prime_UTR
TGGTGGCCGTGATGTTAGGA+AGG 0.558530 1_3:+33966952 Msa0115190:CDS
CACTCCAATTCTAGTGGCAA+CGG 0.558952 1_3:+33966646 Msa0115190:CDS
TGACAAGAGAAGCCACCTCA+TGG 0.560777 1_3:+33965383 Msa0115190:CDS
GAAATTCTGTAGAAGAGGGA+GGG 0.562680 1_3:+33967267 Msa0115190:three_prime_UTR
GCAAGGACTCCTTATGGTGG+TGG 0.564052 1_3:+33966899 Msa0115190:CDS
ATAGGAAGAACAGGACGAGC+TGG 0.564587 1_3:+33966758 Msa0115190:CDS
AACTTTGAGAACAGCTACAT+GGG 0.566954 1_3:+33962382 Msa0115190:CDS
CTCAAAGACCACGTGTGGCA+AGG 0.567966 1_3:+33963026 Msa0115190:CDS
AGCCACCAAAGAAGGTGGCT+CGG 0.568542 1_3:-33962507 None:intergenic
AAAATAACCTGTTGGGTGAT+CGG 0.572239 1_3:-33963268 None:intergenic
TGAAATTCTGTAGAAGAGGG+AGG 0.573097 1_3:+33967266 Msa0115190:three_prime_UTR
GCATTGAGATCATTCAAGAC+TGG 0.575269 1_3:+33966620 Msa0115190:CDS
TACTCTTTGAGCAATTAGAT+CGG 0.575437 1_3:-33965343 None:intergenic
TTTGAGCATACTGCTCCCTA+AGG 0.575748 1_3:-33963009 None:intergenic
GTAGGTGGAGGATACGGTGG+TGG 0.578316 1_3:+33962602 Msa0115190:CDS
GGTTTGAAATTCTGTAGAAG+AGG 0.578896 1_3:+33967262 Msa0115190:three_prime_UTR
TGAAACCGACACCGGTTCAG+AGG 0.581133 1_3:+33962885 Msa0115190:CDS
ATTTCCGCAAACGTATTCAC+GGG 0.581521 1_3:-33962815 None:intergenic
ATTGGTGGATTTGCTTGAGA+GGG 0.582228 1_3:+33963438 Msa0115190:CDS
CAGTTGCGGGAGCTTGAGAG+AGG 0.583458 1_3:+33963385 Msa0115190:intron
GGGAATGGGAGGGAGCGTGT+GGG 0.587644 1_3:+33962659 Msa0115190:CDS
TACTATGGTGGAAACGGTGG+TGG 0.589805 1_3:+33967001 Msa0115190:CDS
TGCAGCTAATGCTTCATCGG+CGG 0.591848 1_3:+33962421 Msa0115190:CDS
GGTGTTCCTGCCAGTTATGG+CGG 0.592814 1_3:+33967028 Msa0115190:CDS
AGATGCGGAGGAACATAAGC+CGG 0.592878 1_3:-33962458 None:intergenic
TTTCTCTCTGAGCATGAAGG+AGG 0.593891 1_3:-33965407 None:intergenic
GGCTCACCCGTTATGCAGCA+AGG 0.594047 1_3:+33966882 Msa0115190:CDS
CAGAGAGAAAATGATGTGAA+TGG 0.597153 1_3:+33965420 Msa0115190:CDS
GGTAGAAACAAGCGGACTGG+GGG 0.597859 1_3:+33966920 Msa0115190:CDS
TTCCTGCCAGTTATGGCGGA+GGG 0.597902 1_3:+33967032 Msa0115190:CDS
TGGGTTTAACAGAGGAGGAG+CGG 0.599864 1_3:+33962637 Msa0115190:CDS
GCAACGGATGTTGCAGCACG+TGG 0.601102 1_3:+33966662 Msa0115190:CDS
GCAAACGTATTCACGGGAGG+CGG 0.604661 1_3:-33962809 None:intergenic
TCAAAGAGTAGAATATGTGC+TGG 0.606920 1_3:+33965356 Msa0115190:CDS
TTTGGTGGGTTTAACAGAGG+AGG 0.607075 1_3:+33962632 Msa0115190:CDS
ATATTCCTGTGGAGACAAGT+GGG 0.611992 1_3:+33962777 Msa0115190:CDS
TGACAAGAGAGCTCCCGAGT+AGG 0.612221 1_3:-33963079 None:intergenic
AGAAAATGATGTGAATGGCA+AGG 0.613108 1_3:+33965425 Msa0115190:CDS
TGGTAGAAACAAGCGGACTG+GGG 0.618436 1_3:+33966919 Msa0115190:CDS
ACAAGAGAGCTCCCGAGTAG+GGG 0.618683 1_3:-33963077 None:intergenic
GCTGGGAGACAAGTAGGTGG+AGG 0.620887 1_3:+33962590 Msa0115190:CDS
TAGCTCTTGATGAAGCAGAT+CGG 0.621564 1_3:+33963491 Msa0115190:CDS
TGTAACTTAATAGGTTCTGA+TGG 0.623195 1_3:+33967540 Msa0115190:three_prime_UTR
GCATACCTCTGAACCGGTGT+CGG 0.624694 1_3:-33962890 None:intergenic
TCTTGCATCAGATCAGCCAA+TGG 0.629103 1_3:-33966836 None:intergenic
AGCTCTCCTTCCTAACATCA+CGG 0.629638 1_3:-33966958 None:intergenic
GAATCGTTGATTAAGAAGCG+TGG 0.631655 1_3:+33962298 Msa0115190:five_prime_UTR
TATGGCGGAGGGTATGGTCA+AGG 0.633849 1_3:+33967043 Msa0115190:CDS
TCCGCAAACGTATTCACGGG+AGG 0.641164 1_3:-33962812 None:intergenic
ATTGGCTGATCTGATGCAAG+AGG 0.641218 1_3:+33966838 Msa0115190:CDS
TCATTAGCCACCAAAGAAGG+TGG 0.641664 1_3:-33962512 None:intergenic
GCATGGATTTAGGAAAACCA+TGG 0.643218 1_3:-33967172 None:intergenic
TATTCCACGTGTAGCACATG+TGG 0.646595 1_3:+33966691 Msa0115190:CDS
TGCTTATGATGATATTCCTG+TGG 0.648043 1_3:+33962766 Msa0115190:CDS
GTAGTGGAAAATAACCTGTT+GGG 0.649862 1_3:-33963275 None:intergenic
CATGAAGGAGGTCCATGAGG+TGG 0.651399 1_3:-33965395 None:intergenic
GATATTCCTGTGGAGACAAG+TGG 0.652499 1_3:+33962776 Msa0115190:CDS
ACATTGATGATTATGTGCAC+CGG 0.653916 1_3:+33966735 Msa0115190:CDS
CAAATCAAGAAGTACCTGCA+TGG 0.655342 1_3:+33966861 Msa0115190:CDS
GGTTTAACAGAGGAGGAGCG+GGG 0.655998 1_3:+33962639 Msa0115190:CDS
GTATGCTCAAAGACCACGTG+TGG 0.655998 1_3:+33963021 Msa0115190:CDS
TGGAAACACTCCAATTCTAG+TGG 0.656487 1_3:+33966640 Msa0115190:CDS
TAAGCAGTCCTTGCCACACG+TGG 0.657422 1_3:-33963034 None:intergenic
GGGGACAGGATAAGTGCGAG+AGG 0.659758 1_3:-33963058 None:intergenic
ATTGATCGGTTACGAAGATG+CGG 0.670418 1_3:-33962473 None:intergenic
GGGGCTGGGAGACAAGTAGG+TGG 0.673887 1_3:+33962587 Msa0115190:CDS
TCTTTCACAGATACATGACG+AGG 0.678510 1_3:+33963189 Msa0115190:intron
AGCGTCTGTCTCATGCCTGG+AGG 0.679639 1_3:-33963574 None:intergenic
GAGCATGAAGGAGGTCCATG+AGG 0.681402 1_3:-33965398 None:intergenic
TAAGTATGTGAAACCGACAC+CGG 0.684063 1_3:+33962877 Msa0115190:CDS
TGTGGGTGGAGGAAGACGTG+AGG 0.686602 1_3:+33962676 Msa0115190:CDS
AAGGTCGTAGTTGCTTATGG+AGG 0.686644 1_3:+33963241 Msa0115190:CDS
GCAGCAAGGACTCCTTATGG+TGG 0.693000 1_3:+33966896 Msa0115190:CDS
CAAGTAGGTGGAGGATACGG+TGG 0.693155 1_3:+33962599 Msa0115190:CDS
GATCGGTTACGAAGATGCGG+AGG 0.696419 1_3:-33962470 None:intergenic
GATTACTATGGTGGAAACGG+TGG 0.697976 1_3:+33966998 Msa0115190:CDS
TTACTGAGCAAGAGAATACG+GGG 0.714021 1_3:+33962732 Msa0115190:CDS
GAGAGGTGTTGATATTCTGG+TGG 0.718235 1_3:+33963402 Msa0115190:CDS
TATTCCTGTGGAGACAAGTG+GGG 0.722741 1_3:+33962778 Msa0115190:CDS
TTTACCACATGTGCTACACG+TGG 0.724158 1_3:-33966695 None:intergenic
ATGGTGGTGGTAGAAACAAG+CGG 0.731166 1_3:+33966912 Msa0115190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGAGTTTTAAATTTATA+AGG + chr1_3:33966186-33966205 Msa0115190:intron 10.0%
!! AAAGAATAAAAACAAAACAT+TGG - chr1_3:33963174-33963193 None:intergenic 15.0%
!!! ACATACTTTTTACAATAAAT+GGG - chr1_3:33963730-33963749 None:intergenic 15.0%
!!! AACATACTTTTTACAATAAA+TGG - chr1_3:33963731-33963750 None:intergenic 15.0%
!!! TTGTTTCTTTAATTTAGAAT+TGG + chr1_3:33963771-33963790 Msa0115190:intron 15.0%
!!! AAAATAGCTTTTGATTTAAA+AGG + chr1_3:33963930-33963949 Msa0115190:intron 15.0%
!!! AAATAGCTTTTGATTTAAAA+GGG + chr1_3:33963931-33963950 Msa0115190:intron 15.0%
!!! AATTGATTTTTGAAGTATTT+TGG + chr1_3:33964222-33964241 Msa0115190:intron 15.0%
!!! ATGTTAATCTTTACTTATTT+TGG + chr1_3:33964372-33964391 Msa0115190:intron 15.0%
!!! TTTTTGAAATAATTATAGTC+AGG + chr1_3:33964964-33964983 Msa0115190:intron 15.0%
!! TGATAGAATTTAATAACTAA+TGG - chr1_3:33966482-33966501 None:intergenic 15.0%
!!! TTTCAATTTTATTTCAGCTT+AGG + chr1_3:33962137-33962156 Msa0115190:intron 20.0%
!! CTTACTAAAACTCAATAAAA+AGG - chr1_3:33963327-33963346 None:intergenic 20.0%
!!! CTTTTTATTGAGTTTTAGTA+AGG + chr1_3:33963325-33963344 Msa0115190:intron 20.0%
!!! TATTGTAAAAAGTATGTTTC+TGG + chr1_3:33963733-33963752 Msa0115190:intron 20.0%
!!! CTTTAATTTAGAATTGGTAT+AGG + chr1_3:33963777-33963796 Msa0115190:intron 20.0%
!!! AATAGCTTTTGATTTAAAAG+GGG + chr1_3:33963932-33963951 Msa0115190:intron 20.0%
!!! CAATTTGTTTTATTTAACTG+TGG + chr1_3:33963959-33963978 Msa0115190:intron 20.0%
!!! TTAATCTTTACTTATTTTGG+AGG + chr1_3:33964375-33964394 Msa0115190:intron 20.0%
!!! AATGAGACAAATTTTGAATA+TGG - chr1_3:33964723-33964742 None:intergenic 20.0%
!! ATTCAAAATTTGTCTCATTA+AGG + chr1_3:33964724-33964743 Msa0115190:intron 20.0%
!! ATATTATTACATATTACGAG+TGG + chr1_3:33964831-33964850 Msa0115190:intron 20.0%
!! ATTAATTAACTAACAGAGTT+TGG + chr1_3:33965148-33965167 Msa0115190:intron 20.0%
!! AATATCAGATGTTAGTAAAA+AGG - chr1_3:33965860-33965879 None:intergenic 20.0%
!!! AATTTGCGTTTTTTCTTTTT+TGG + chr1_3:33966340-33966359 Msa0115190:intron 20.0%
!!! ATTTGCGTTTTTTCTTTTTT+GGG + chr1_3:33966341-33966360 Msa0115190:intron 20.0%
!! AATAAAGGAAATGATTACTA+TGG + chr1_3:33966986-33967005 Msa0115190:CDS 20.0%
!! AGGAAAGGAAAAATAATATT+AGG - chr1_3:33967480-33967499 None:intergenic 20.0%
! AAAATTAGGATTATGCGAAT+CGG - chr1_3:33962060-33962079 None:intergenic 25.0%
! TTCATAATCTGTATATGACT+AGG + chr1_3:33963130-33963149 Msa0115190:intron 25.0%
! TGTTTGATAAGAAAACTTCT+TGG - chr1_3:33963215-33963234 None:intergenic 25.0%
!! AAGAAGTTTTCTTATCAAAC+AGG + chr1_3:33963214-33963233 Msa0115190:CDS 25.0%
!! AGAAGTTTTCTTATCAAACA+GGG + chr1_3:33963215-33963234 Msa0115190:CDS 25.0%
!! ATACTATTTGATTTCAGTTG+CGG + chr1_3:33963371-33963390 Msa0115190:intron 25.0%
!! TCAACTATCTTTCTTATTTG+AGG - chr1_3:33963538-33963557 None:intergenic 25.0%
! AAGAAAGATAGTTGAACAAA+TGG + chr1_3:33963543-33963562 Msa0115190:CDS 25.0%
! AAAAAAACACAAATGTTCCA+GGG - chr1_3:33963694-33963713 None:intergenic 25.0%
! TAAAAAAACACAAATGTTCC+AGG - chr1_3:33963695-33963714 None:intergenic 25.0%
! TATTGTATGTATTGAATCGA+AGG - chr1_3:33964032-33964051 None:intergenic 25.0%
!!! GTTTGGTTTTGATTGAATTA+AGG + chr1_3:33964170-33964189 Msa0115190:intron 25.0%
! ATAAATAAGACTCAGTTTCA+TGG - chr1_3:33964354-33964373 None:intergenic 25.0%
! TCTATAGATTGATAAGAGTA+TGG - chr1_3:33964566-33964585 None:intergenic 25.0%
!! GTTGAAGAAATAGTTCTTTT+TGG + chr1_3:33964689-33964708 Msa0115190:intron 25.0%
! TTATAGTCAGGATTAAATGA+TGG + chr1_3:33964976-33964995 Msa0115190:intron 25.0%
!!! CTCAATTAAGGATTTTTTTG+TGG + chr1_3:33965601-33965620 Msa0115190:intron 25.0%
!! AAAACAAAAGAAGCTTCTTT+TGG - chr1_3:33966037-33966056 None:intergenic 25.0%
! AAAAAAAAATCCTCCAAAGT+AGG - chr1_3:33966125-33966144 None:intergenic 25.0%
! AAATTGAAATTTCGAAGCAT+CGG - chr1_3:33966325-33966344 None:intergenic 25.0%
! TGAGCGAATTTAATAACTAA+TGG - chr1_3:33966519-33966538 None:intergenic 25.0%
! AAAAGTCCTAACACAATATT+GGG - chr1_3:33966548-33966567 None:intergenic 25.0%
! ACATAATCATCAATGTCATT+GGG - chr1_3:33966731-33966750 None:intergenic 25.0%
!!! ATATTACTGGTTTATGTTGT+GGG + chr1_3:33967326-33967345 Msa0115190:three_prime_UTR 25.0%
! TAATATGTGCATGCTAATTA+GGG - chr1_3:33967407-33967426 None:intergenic 25.0%
! TTAATATGTGCATGCTAATT+AGG - chr1_3:33967408-33967427 None:intergenic 25.0%
! GTAGTTATTAATGAAGTGTA+GGG - chr1_3:33967458-33967477 None:intergenic 25.0%
!!! ATTATTTTTCCTTTCCTAGA+AGG + chr1_3:33967483-33967502 Msa0115190:three_prime_UTR 25.0%
!! CCATAAAACCAATTTTATCT+CGG + chr1_3:33967508-33967527 Msa0115190:three_prime_UTR 25.0%
AAAAATCTTCATCTCCTTCA+AGG + chr1_3:33962000-33962019 Msa0115190:five_prime_UTR 30.0%
! TCGAATTTTAAGCAGGATTT+TGG + chr1_3:33962566-33962585 Msa0115190:CDS 30.0%
! CGAATTTTAAGCAGGATTTT+GGG + chr1_3:33962567-33962586 Msa0115190:CDS 30.0%
! GAATTTTAAGCAGGATTTTG+GGG + chr1_3:33962568-33962587 Msa0115190:CDS 30.0%
TCATCAACATCATTCTCAAA+CGG - chr1_3:33962707-33962726 None:intergenic 30.0%
! TTTTGCTTTCCGATTATAAG+CGG + chr1_3:33962983-33963002 Msa0115190:CDS 30.0%
! GAAGTTTTCTTATCAAACAG+GGG + chr1_3:33963216-33963235 Msa0115190:CDS 30.0%
! TACTATTTGATTTCAGTTGC+GGG + chr1_3:33963372-33963391 Msa0115190:intron 30.0%
CAAATTACCTGTATCTCTTT+GGG - chr1_3:33963619-33963638 None:intergenic 30.0%
ACAAATTACCTGTATCTCTT+TGG - chr1_3:33963620-33963639 None:intergenic 30.0%
!!! GACTTGTTATTTTTTGCATG+AGG + chr1_3:33963659-33963678 Msa0115190:intron 30.0%
AATTGAGATTGCCATAATTC+AGG + chr1_3:33963833-33963852 Msa0115190:intron 30.0%
ATGTTCAAACACCTGAATTA+TGG - chr1_3:33963847-33963866 None:intergenic 30.0%
AACATAACTCCAAGATAACT+AGG - chr1_3:33964153-33964172 None:intergenic 30.0%
AGTTATCTTGGAGTTATGTT+TGG + chr1_3:33964153-33964172 Msa0115190:intron 30.0%
CGATACATGATTCAAAAAAG+TGG + chr1_3:33964293-33964312 Msa0115190:intron 30.0%
!!! TCTTTACTTATTTTGGAGGA+AGG + chr1_3:33964379-33964398 Msa0115190:intron 30.0%
!!! CTTTACTTATTTTGGAGGAA+GGG + chr1_3:33964380-33964399 Msa0115190:intron 30.0%
ACCTATTCTAATAATCCTCA+AGG + chr1_3:33964497-33964516 Msa0115190:intron 30.0%
TCCTTGAGGATTATTAGAAT+AGG - chr1_3:33964501-33964520 None:intergenic 30.0%
! GAACTATTTCTTCAACTCTA+AGG - chr1_3:33964685-33964704 None:intergenic 30.0%
CAAAATTTGTCTCATTAAGG+TGG + chr1_3:33964727-33964746 Msa0115190:intron 30.0%
AATGAATGAAGCATGGTTAT+AGG - chr1_3:33964887-33964906 None:intergenic 30.0%
ATAACCATGCTTCATTCATT+TGG + chr1_3:33964887-33964906 Msa0115190:intron 30.0%
!! AAATGATGGTGATGTAGTTT+TGG + chr1_3:33964990-33965009 Msa0115190:intron 30.0%
!! AATGATGGTGATGTAGTTTT+GGG + chr1_3:33964991-33965010 Msa0115190:intron 30.0%
!! GGGATAAGTTGAAGTTTTTA+TGG + chr1_3:33965012-33965031 Msa0115190:intron 30.0%
TCTTGCTAGTTATATCTTTC+TGG + chr1_3:33965296-33965315 Msa0115190:CDS 30.0%
TACTCTTTGAGCAATTAGAT+CGG - chr1_3:33965346-33965365 None:intergenic 30.0%
ATTCAAACTTGTACATGTGT+TGG + chr1_3:33965475-33965494 Msa0115190:intron 30.0%
CACTAACAAAATGTAAACTG+CGG - chr1_3:33965501-33965520 None:intergenic 30.0%
ACAGTCGTTTATTTAAGAGT+AGG + chr1_3:33965557-33965576 Msa0115190:intron 30.0%
TTTAAGAGTAGGAAGATTTC+TGG + chr1_3:33965568-33965587 Msa0115190:intron 30.0%
! ATGTAGAACTTAAAAGCACA+AGG - chr1_3:33965884-33965903 None:intergenic 30.0%
CATTCTCAATGAGACTTTAA+CGG + chr1_3:33965901-33965920 Msa0115190:intron 30.0%
ATTCTCAATGAGACTTTAAC+GGG + chr1_3:33965902-33965921 Msa0115190:intron 30.0%
TTCACTATAGTTGAAATGAC+AGG + chr1_3:33966055-33966074 Msa0115190:intron 30.0%
ATGCGCTAAGAAATTTCAAT+AGG - chr1_3:33966244-33966263 None:intergenic 30.0%
ATTGAAATTTCTTAGCGCAT+TGG + chr1_3:33966244-33966263 Msa0115190:intron 30.0%
!!! TTTTTTCTTTTTTGGGTGCA+TGG + chr1_3:33966348-33966367 Msa0115190:intron 30.0%
!!! TTTTTAGTTGTTGTCAACCA+TGG + chr1_3:33966378-33966397 Msa0115190:intron 30.0%
AATGGAACATCATAATACCA+TGG - chr1_3:33966398-33966417 None:intergenic 30.0%
!! TATGATGTTCCATTGTTTTG+TGG + chr1_3:33966404-33966423 Msa0115190:intron 30.0%
!! ATGATGTTCCATTGTTTTGT+GGG + chr1_3:33966405-33966424 Msa0115190:intron 30.0%
ATTCAATTCCCACAAAACAA+TGG - chr1_3:33966416-33966435 None:intergenic 30.0%
CAAAAGTCCTAACACAATAT+TGG - chr1_3:33966549-33966568 None:intergenic 30.0%
AATGTAATTGTTCTGTTTGC+AGG + chr1_3:33966586-33966605 Msa0115190:intron 30.0%
CACATAATCATCAATGTCAT+TGG - chr1_3:33966732-33966751 None:intergenic 30.0%
CAAATTACTGTCATTGAAGA+AGG - chr1_3:33966804-33966823 None:intergenic 30.0%
! CAATGACAGTAATTTGTCAA+TGG + chr1_3:33966808-33966827 Msa0115190:CDS 30.0%
AAGGAGAGCTCATATAATAA+AGG + chr1_3:33966971-33966990 Msa0115190:CDS 30.0%
AAAGGAAATGATTACTATGG+TGG + chr1_3:33966989-33967008 Msa0115190:CDS 30.0%
! AATGATTACTATGGTGGAAA+CGG + chr1_3:33966995-33967014 Msa0115190:CDS 30.0%
! AAGTTGTATTTTCTCAACCA+TGG + chr1_3:33967155-33967174 Msa0115190:three_prime_UTR 30.0%
! GTTTGAAATTCTGTAGAAGA+GGG + chr1_3:33967263-33967282 Msa0115190:three_prime_UTR 30.0%
! GGGTGTAAACTATATTGTTT+TGG + chr1_3:33967287-33967306 Msa0115190:three_prime_UTR 30.0%
!!! TATATTGTTTTGGAGACTCA+AGG + chr1_3:33967297-33967316 Msa0115190:three_prime_UTR 30.0%
!!! ATATTGTTTTGGAGACTCAA+GGG + chr1_3:33967298-33967317 Msa0115190:three_prime_UTR 30.0%
!! GATATTACTGGTTTATGTTG+TGG + chr1_3:33967325-33967344 Msa0115190:three_prime_UTR 30.0%
!! TGTGGTGTTTTGAATTTGAT+AGG + chr1_3:33967354-33967373 Msa0115190:three_prime_UTR 30.0%
!! GTGGTGTTTTGAATTTGATA+GGG + chr1_3:33967355-33967374 Msa0115190:three_prime_UTR 30.0%
GGTAGTTATTAATGAAGTGT+AGG - chr1_3:33967459-33967478 None:intergenic 30.0%
!!! CCGAGATAAAATTGGTTTTA+TGG - chr1_3:33967511-33967530 None:intergenic 30.0%
! AAAACCAATTTTATCTCGGT+TGG + chr1_3:33967512-33967531 Msa0115190:three_prime_UTR 30.0%
TTGGCTGTATGTAACTTAAT+AGG + chr1_3:33967531-33967550 Msa0115190:three_prime_UTR 30.0%
!! TTTGAGAGCGTGTTTTTCAA+AGG - chr1_3:33961983-33962002 None:intergenic 35.0%
! GTTTGGATTTTGTACCTTGA+AGG - chr1_3:33962017-33962036 None:intergenic 35.0%
! AACTTTGAGAACAGCTACAT+GGG + chr1_3:33962382-33962401 Msa0115190:CDS 35.0%
! TTCTTTGGTGGCTAATGATA+GGG + chr1_3:33962517-33962536 Msa0115190:CDS 35.0%
ATAGGGGTTTGGGTAATAAT+TGG + chr1_3:33962534-33962553 Msa0115190:CDS 35.0%
TAGGGGTTTGGGTAATAATT+GGG + chr1_3:33962535-33962554 Msa0115190:CDS 35.0%
! TAGTTCGTCGAATTTTAAGC+AGG + chr1_3:33962559-33962578 Msa0115190:CDS 35.0%
GTATTCTCTTGCTCAGTAAA+CGG - chr1_3:33962731-33962750 None:intergenic 35.0%
GTTTACTGAGCAAGAGAATA+CGG + chr1_3:33962730-33962749 Msa0115190:CDS 35.0%
TTTACTGAGCAAGAGAATAC+GGG + chr1_3:33962731-33962750 Msa0115190:CDS 35.0%
TGCTTATGATGATATTCCTG+TGG + chr1_3:33962766-33962785 Msa0115190:CDS 35.0%
TATTTCCGCAAACGTATTCA+CGG - chr1_3:33962819-33962838 None:intergenic 35.0%
ACGTTTGCGGAAATAGATTT+AGG + chr1_3:33962824-33962843 Msa0115190:CDS 35.0%
CTAAGGATTCCGCTTATAAT+CGG - chr1_3:33962995-33963014 None:intergenic 35.0%
GATTATAAGCGGAATCCTTA+GGG + chr1_3:33962994-33963013 Msa0115190:CDS 35.0%
AAAATAACCTGTTGGGTGAT+CGG - chr1_3:33963271-33963290 None:intergenic 35.0%
! GTAGTGGAAAATAACCTGTT+GGG - chr1_3:33963278-33963297 None:intergenic 35.0%
! TGTAGTGGAAAATAACCTGT+TGG - chr1_3:33963279-33963298 None:intergenic 35.0%
CAAACAAACATTGCATGTAG+TGG - chr1_3:33963294-33963313 None:intergenic 35.0%
AACATTTCCCAAAGAGATAC+AGG + chr1_3:33963609-33963628 Msa0115190:CDS 35.0%
ATACAGAGTAAGATACGTAC+CGG - chr1_3:33964087-33964106 None:intergenic 35.0%
CTAAAACCTCCTAGTTATCT+TGG + chr1_3:33964141-33964160 Msa0115190:intron 35.0%
ATAACTCCAAGATAACTAGG+AGG - chr1_3:33964150-33964169 None:intergenic 35.0%
AGGGTTACTACTATAGTGTA+AGG + chr1_3:33964399-33964418 Msa0115190:intron 35.0%
CTATAGTGTAAGGATTGAAC+AGG + chr1_3:33964409-33964428 Msa0115190:intron 35.0%
! ATAATCCTCAAGGAAAGTGT+AGG + chr1_3:33964507-33964526 Msa0115190:intron 35.0%
CAATCTATAGAACCTCAATC+TGG + chr1_3:33964575-33964594 Msa0115190:intron 35.0%
!! TTGTTTTTCTGCCAACATCA+AGG - chr1_3:33964605-33964624 None:intergenic 35.0%
ATAACAGAGTCAGACACAAT+TGG - chr1_3:33964770-33964789 None:intergenic 35.0%
CTCTGTTATGTAGACTACTA+TGG + chr1_3:33964781-33964800 Msa0115190:intron 35.0%
!! ATGATGGTGATGTAGTTTTG+GGG + chr1_3:33964992-33965011 Msa0115190:intron 35.0%
GTCATAGAAACTGTTTGCTT+AGG + chr1_3:33965094-33965113 Msa0115190:intron 35.0%
!! AGTTATATCTTTCTGGCTGT+TGG + chr1_3:33965303-33965322 Msa0115190:CDS 35.0%
TCAAAGAGTAGAATATGTGC+TGG + chr1_3:33965356-33965375 Msa0115190:CDS 35.0%
CAGAGAGAAAATGATGTGAA+TGG + chr1_3:33965420-33965439 Msa0115190:CDS 35.0%
AGAAAATGATGTGAATGGCA+AGG + chr1_3:33965425-33965444 Msa0115190:CDS 35.0%
ATTCAAAAACTATGCTGCAC+TGG + chr1_3:33965533-33965552 Msa0115190:intron 35.0%
!! GGTTTTGTCACACTCAATTA+AGG + chr1_3:33965589-33965608 Msa0115190:intron 35.0%
! TTTTTGTGGTTTTTGCAGCA+AGG + chr1_3:33965615-33965634 Msa0115190:intron 35.0%
TTCTCAATGAGACTTTAACG+GGG + chr1_3:33965903-33965922 Msa0115190:intron 35.0%
AGTTTATACTGCCACAGAAA+TGG + chr1_3:33965978-33965997 Msa0115190:intron 35.0%
GTTTATACTGCCACAGAAAT+GGG + chr1_3:33965979-33965998 Msa0115190:intron 35.0%
!! AAGAAGCTTCTTTTGGAAGA+GGG - chr1_3:33966030-33966049 None:intergenic 35.0%
!! AAAGAAGCTTCTTTTGGAAG+AGG - chr1_3:33966031-33966050 None:intergenic 35.0%
AAAATCCTCCAAAGTAGGAA+GGG - chr1_3:33966120-33966139 None:intergenic 35.0%
AAAAATCCTCCAAAGTAGGA+AGG - chr1_3:33966121-33966140 None:intergenic 35.0%
GTGGGAATTGAATTTCTCTA+TGG + chr1_3:33966423-33966442 Msa0115190:intron 35.0%
AGCTTTCCCAATATTGTGTT+AGG + chr1_3:33966539-33966558 Msa0115190:intron 35.0%
! ACATTGATGATTATGTGCAC+CGG + chr1_3:33966735-33966754 Msa0115190:CDS 35.0%
TCGCTAATTCATTCTCATGT+TGG + chr1_3:33967100-33967119 Msa0115190:three_prime_UTR 35.0%
CGCTAATTCATTCTCATGTT+GGG + chr1_3:33967101-33967120 Msa0115190:three_prime_UTR 35.0%
AGTAAGGAATGCATGGATTT+AGG - chr1_3:33967185-33967204 None:intergenic 35.0%
GACAAAGATTTCCTGTAGTA+AGG - chr1_3:33967201-33967220 None:intergenic 35.0%
! GGTTTGAAATTCTGTAGAAG+AGG + chr1_3:33967262-33967281 Msa0115190:three_prime_UTR 35.0%
!!! TATTGTTTTGGAGACTCAAG+GGG + chr1_3:33967299-33967318 Msa0115190:three_prime_UTR 35.0%
TTTATGTTGTGGGTAGTATG+TGG + chr1_3:33967336-33967355 Msa0115190:three_prime_UTR 35.0%
! TTTATGGATCCTTCTAGGAA+AGG - chr1_3:33967495-33967514 None:intergenic 35.0%
!!! TTGGTTTTATGGATCCTTCT+AGG - chr1_3:33967500-33967519 None:intergenic 35.0%
GAATCGGATAAGATTGAAGG+AGG - chr1_3:33962044-33962063 None:intergenic 40.0%
TGCGAATCGGATAAGATTGA+AGG - chr1_3:33962047-33962066 None:intergenic 40.0%
! GAATCGTTGATTAAGAAGCG+TGG + chr1_3:33962298-33962317 Msa0115190:five_prime_UTR 40.0%
! CAACTTTGAGAACAGCTACA+TGG + chr1_3:33962381-33962400 Msa0115190:CDS 40.0%
CAATGCAGCTAATGCTTCAT+CGG + chr1_3:33962418-33962437 Msa0115190:CDS 40.0%
ATTGATCGGTTACGAAGATG+CGG - chr1_3:33962476-33962495 None:intergenic 40.0%
CTATCATTAGCCACCAAAGA+AGG - chr1_3:33962518-33962537 None:intergenic 40.0%
! CTTCTTTGGTGGCTAATGAT+AGG + chr1_3:33962516-33962535 Msa0115190:CDS 40.0%
! TCTTTGGTGGCTAATGATAG+GGG + chr1_3:33962518-33962537 Msa0115190:CDS 40.0%
AGGGGTTTGGGTAATAATTG+GGG + chr1_3:33962536-33962555 Msa0115190:CDS 40.0%
TTACTGAGCAAGAGAATACG+GGG + chr1_3:33962732-33962751 Msa0115190:CDS 40.0%
ATATTCCTGTGGAGACAAGT+GGG + chr1_3:33962777-33962796 Msa0115190:CDS 40.0%
ATTTCCGCAAACGTATTCAC+GGG - chr1_3:33962818-33962837 None:intergenic 40.0%
TAAGTATGTGAAACCGACAC+CGG + chr1_3:33962877-33962896 Msa0115190:CDS 40.0%
CGATTATAAGCGGAATCCTT+AGG + chr1_3:33962993-33963012 Msa0115190:CDS 40.0%
TCTTTCACAGATACATGACG+AGG + chr1_3:33963189-33963208 Msa0115190:intron 40.0%
TTCTTATCAAACAGGGGTCA+AGG + chr1_3:33963222-33963241 Msa0115190:CDS 40.0%
!! TGAGAGAGGTGTTGATATTC+TGG + chr1_3:33963399-33963418 Msa0115190:CDS 40.0%
!! ATTGGTGGATTTGCTTGAGA+GGG + chr1_3:33963438-33963457 Msa0115190:CDS 40.0%
TAGCTCTTGATGAAGCAGAT+CGG + chr1_3:33963491-33963510 Msa0115190:CDS 40.0%
AAAACACAAATGTTCCAGGG+AGG - chr1_3:33963691-33963710 None:intergenic 40.0%
! TCAAGGTTGGCTATTTGTTG+GGG - chr1_3:33963900-33963919 None:intergenic 40.0%
! CTCAAGGTTGGCTATTTGTT+GGG - chr1_3:33963901-33963920 None:intergenic 40.0%
! TCTCAAGGTTGGCTATTTGT+TGG - chr1_3:33963902-33963921 None:intergenic 40.0%
AAATAGCCAACCTTGAGAGT+AGG + chr1_3:33963904-33963923 Msa0115190:intron 40.0%
AATAGCCAACCTTGAGAGTA+GGG + chr1_3:33963905-33963924 Msa0115190:intron 40.0%
!! CTATTTTTCCCCTACTCTCA+AGG - chr1_3:33963917-33963936 None:intergenic 40.0%
TGTATTGCAAAACACCCAAC+TGG + chr1_3:33964102-33964121 Msa0115190:intron 40.0%
AAACACCCAACTGGTGAATA+TGG + chr1_3:33964111-33964130 Msa0115190:intron 40.0%
CCTTACCATATTCACCAGTT+GGG - chr1_3:33964119-33964138 None:intergenic 40.0%
CCAACTGGTGAATATGGTAA+GGG + chr1_3:33964117-33964136 Msa0115190:intron 40.0%
GAATAGGTTGTCGCTAAACA+CGG - chr1_3:33964485-33964504 None:intergenic 40.0%
CTATAGAACCTCAATCTGGA+TGG + chr1_3:33964579-33964598 Msa0115190:intron 40.0%
TGTCTCATTAAGGTGGAAAG+CGG + chr1_3:33964734-33964753 Msa0115190:intron 40.0%
CTGCAGTGCATTCAAATGAA+GGG - chr1_3:33965259-33965278 None:intergenic 40.0%
TCTGCAGTGCATTCAAATGA+AGG - chr1_3:33965260-33965279 None:intergenic 40.0%
!! ATATCTTTCTGGCTGTTGGA+AGG + chr1_3:33965307-33965326 Msa0115190:CDS 40.0%
!! TATCTTTCTGGCTGTTGGAA+GGG + chr1_3:33965308-33965327 Msa0115190:CDS 40.0%
! CATTTTCTCTCTGAGCATGA+AGG - chr1_3:33965413-33965432 None:intergenic 40.0%
AGGTCTGACTTTAGTGTTTG+TGG + chr1_3:33965635-33965654 Msa0115190:CDS 40.0%
GTGTTTGTGGAAACGAAGAA+AGG + chr1_3:33965648-33965667 Msa0115190:CDS 40.0%
GAACACTGCTTGTGTGTTAA+CGG + chr1_3:33965684-33965703 Msa0115190:CDS 40.0%
AACACTGCTTGTGTGTTAAC+GGG + chr1_3:33965685-33965704 Msa0115190:CDS 40.0%
TTTCCTGCAACTTGCATTCA+TGG + chr1_3:33965708-33965727 Msa0115190:CDS 40.0%
!! TTTTGGAAGAGGGGGAAATT+AGG - chr1_3:33966020-33966039 None:intergenic 40.0%
!! AGAAGCTTCTTTTGGAAGAG+GGG - chr1_3:33966029-33966048 None:intergenic 40.0%
! GATGGGCTTTCATGGTAATT+TGG - chr1_3:33966083-33966102 None:intergenic 40.0%
TCTTAGCGCATTGGATATGT+AGG + chr1_3:33966253-33966272 Msa0115190:intron 40.0%
!! GCATCGGTTCTATGGTTTAA+TGG - chr1_3:33966309-33966328 None:intergenic 40.0%
!! ATTTCGAAGCATCGGTTCTA+TGG - chr1_3:33966317-33966336 None:intergenic 40.0%
!!! TTTCTTTTTTGGGTGCATGG+TGG + chr1_3:33966351-33966370 Msa0115190:intron 40.0%
GCATTGAGATCATTCAAGAC+TGG + chr1_3:33966620-33966639 Msa0115190:CDS 40.0%
TGGAAACACTCCAATTCTAG+TGG + chr1_3:33966640-33966659 Msa0115190:CDS 40.0%
!! CAAATCAAGAAGTACCTGCA+TGG + chr1_3:33966861-33966880 Msa0115190:CDS 40.0%
!! TTGTTTCTACCACCACCATA+AGG - chr1_3:33966911-33966930 None:intergenic 40.0%
TCAAGGTGTAACAAGTGCTT+GGG + chr1_3:33967060-33967079 Msa0115190:CDS 40.0%
TGTAACAAGTGCTTGGGATT+AGG + chr1_3:33967066-33967085 Msa0115190:CDS 40.0%
GCATGGATTTAGGAAAACCA+TGG - chr1_3:33967175-33967194 None:intergenic 40.0%
ATCCATGCATTCCTTACTAC+AGG + chr1_3:33967187-33967206 Msa0115190:three_prime_UTR 40.0%
TTCCTGTAGTAAGGAATGCA+TGG - chr1_3:33967192-33967211 None:intergenic 40.0%
CTTTGTCAATGATCCACAAC+TGG + chr1_3:33967214-33967233 Msa0115190:three_prime_UTR 40.0%
TGAAATTCTGTAGAAGAGGG+AGG + chr1_3:33967266-33967285 Msa0115190:three_prime_UTR 40.0%
GAAATTCTGTAGAAGAGGGA+GGG + chr1_3:33967267-33967286 Msa0115190:three_prime_UTR 40.0%
!!! ATTGTTTTGGAGACTCAAGG+GGG + chr1_3:33967300-33967319 Msa0115190:three_prime_UTR 40.0%
!! AGGGTTCTTAGCTTTTGACT+CGG + chr1_3:33967374-33967393 Msa0115190:three_prime_UTR 40.0%
ACAGCCAACCGAGATAAAAT+TGG - chr1_3:33967519-33967538 None:intergenic 40.0%
! TGCGCAACAAAAAGCGTGTT+TGG + chr1_3:33961871-33961890 Msa0115190:five_prime_UTR 45.0%
AGATTGAAGGAGGAGAGGTT+TGG - chr1_3:33962034-33962053 None:intergenic 45.0%
GGATAAGATTGAAGGAGGAG+AGG - chr1_3:33962039-33962058 None:intergenic 45.0%
GCATCTTCGTAACCGATCAA+TGG + chr1_3:33962475-33962494 Msa0115190:CDS 45.0%
TCATTAGCCACCAAAGAAGG+TGG - chr1_3:33962515-33962534 None:intergenic 45.0%
GTGGCTAATGATAGGGGTTT+GGG + chr1_3:33962524-33962543 Msa0115190:CDS 45.0%
!!! TTTAAGCAGGATTTTGGGGC+TGG + chr1_3:33962572-33962591 Msa0115190:CDS 45.0%
!!! TTAAGCAGGATTTTGGGGCT+GGG + chr1_3:33962573-33962592 Msa0115190:CDS 45.0%
AGACAAGTAGGTGGAGGATA+CGG + chr1_3:33962596-33962615 Msa0115190:CDS 45.0%
!! TTTGGTGGGTTTAACAGAGG+AGG + chr1_3:33962632-33962651 Msa0115190:CDS 45.0%
GATATTCCTGTGGAGACAAG+TGG + chr1_3:33962776-33962795 Msa0115190:CDS 45.0%
TATTCCTGTGGAGACAAGTG+GGG + chr1_3:33962778-33962797 Msa0115190:CDS 45.0%
GGTATAGCATACCTCTGAAC+CGG - chr1_3:33962899-33962918 None:intergenic 45.0%
!! CTATACCGATTTCGCTTGCT+GGG + chr1_3:33962912-33962931 Msa0115190:CDS 45.0%
! TTTGATGGCTTGTGCTCAGA+CGG + chr1_3:33962940-33962959 Msa0115190:CDS 45.0%
TTTGAGCATACTGCTCCCTA+AGG - chr1_3:33963012-33963031 None:intergenic 45.0%
GTCAAGGTCGTAGTTGCTTA+TGG + chr1_3:33963238-33963257 Msa0115190:CDS 45.0%
AAGGTCGTAGTTGCTTATGG+AGG + chr1_3:33963241-33963260 Msa0115190:CDS 45.0%
!! GAGAGGTGTTGATATTCTGG+TGG + chr1_3:33963402-33963421 Msa0115190:CDS 45.0%
!! GATTGGTGGATTTGCTTGAG+AGG + chr1_3:33963437-33963456 Msa0115190:CDS 45.0%
TAACGTCACTTCTGTACTCG+TGG + chr1_3:33963809-33963828 Msa0115190:intron 45.0%
ATAGCCAACCTTGAGAGTAG+GGG + chr1_3:33963906-33963925 Msa0115190:intron 45.0%
! TTTTCCCCTACTCTCAAGGT+TGG - chr1_3:33963913-33963932 None:intergenic 45.0%
GATACGAAAACACCCATCAC+CGG + chr1_3:33964065-33964084 Msa0115190:intron 45.0%
! GTAAGATACGTACCGGTGAT+GGG - chr1_3:33964080-33964099 None:intergenic 45.0%
! AGTAAGATACGTACCGGTGA+TGG - chr1_3:33964081-33964100 None:intergenic 45.0%
CCCAACTGGTGAATATGGTA+AGG + chr1_3:33964116-33964135 Msa0115190:intron 45.0%
CCCTTACCATATTCACCAGT+TGG - chr1_3:33964120-33964139 None:intergenic 45.0%
! GGAAAGTGTAGGCGTGAATT+TGG + chr1_3:33964518-33964537 Msa0115190:intron 45.0%
! AATCTGGATGGCCTTGATGT+TGG + chr1_3:33964591-33964610 Msa0115190:intron 45.0%
CCTGCCAAATGAATGAAGCA+TGG - chr1_3:33964894-33964913 None:intergenic 45.0%
CCATGCTTCATTCATTTGGC+AGG + chr1_3:33964891-33964910 Msa0115190:intron 45.0%
TTTCTCTCTGAGCATGAAGG+AGG - chr1_3:33965410-33965429 None:intergenic 45.0%
TGAATAGCAGCAGTATGCAG+AGG - chr1_3:33965460-33965479 None:intergenic 45.0%
!! GAAGAAAGGTGCTGATGCAT+TGG + chr1_3:33965662-33965681 Msa0115190:CDS 45.0%
ACTGCCACAGAAATGGGATT+TGG + chr1_3:33965985-33966004 Msa0115190:intron 45.0%
GAAGCCAAATCCCATTTCTG+TGG - chr1_3:33965992-33966011 None:intergenic 45.0%
!! GAAGCTTCTTTTGGAAGAGG+GGG - chr1_3:33966028-33966047 None:intergenic 45.0%
! GTGAAAGAGATGGGCTTTCA+TGG - chr1_3:33966091-33966110 None:intergenic 45.0%
CACTCCAATTCTAGTGGCAA+CGG + chr1_3:33966646-33966665 Msa0115190:CDS 45.0%
ACATCCGTTGCCACTAGAAT+TGG - chr1_3:33966653-33966672 None:intergenic 45.0%
TATTCCACGTGTAGCACATG+TGG + chr1_3:33966691-33966710 Msa0115190:CDS 45.0%
TTTACCACATGTGCTACACG+TGG - chr1_3:33966698-33966717 None:intergenic 45.0%
GATGATTATGTGCACCGGAT+AGG + chr1_3:33966740-33966759 Msa0115190:CDS 45.0%
AACAGGACGAGCTGGTAAAA+TGG + chr1_3:33966766-33966785 Msa0115190:CDS 45.0%
ACAGGACGAGCTGGTAAAAT+GGG + chr1_3:33966767-33966786 Msa0115190:CDS 45.0%
AAGGAGTCCTTGCTGCATAA+CGG - chr1_3:33966892-33966911 None:intergenic 45.0%
TATGCAGCAAGGACTCCTTA+TGG + chr1_3:33966893-33966912 Msa0115190:CDS 45.0%
!! ATGGTGGTGGTAGAAACAAG+CGG + chr1_3:33966912-33966931 Msa0115190:CDS 45.0%
TAACATCACGGCCACCAAAA+CGG - chr1_3:33966949-33966968 None:intergenic 45.0%
AGCTCTCCTTCCTAACATCA+CGG - chr1_3:33966961-33966980 None:intergenic 45.0%
! GATTACTATGGTGGAAACGG+TGG + chr1_3:33966998-33967017 Msa0115190:CDS 45.0%
TATGGTGTTCCTGCCAGTTA+TGG + chr1_3:33967025-33967044 Msa0115190:CDS 45.0%
GTCAAGGTGTAACAAGTGCT+TGG + chr1_3:33967059-33967078 Msa0115190:CDS 45.0%
CAGCAAAAGCAAACCAGTTG+TGG - chr1_3:33967230-33967249 None:intergenic 45.0%
!!! CACAACTGGTTTGCTTTTGC+TGG + chr1_3:33967228-33967247 Msa0115190:three_prime_UTR 45.0%
!!! CTGGTTTGCTTTTGCTGGTT+AGG + chr1_3:33967233-33967252 Msa0115190:three_prime_UTR 45.0%
!! CTTTTGCTGGTTAGGCACAT+AGG + chr1_3:33967241-33967260 Msa0115190:three_prime_UTR 45.0%
!! GGGTTCTTAGCTTTTGACTC+GGG + chr1_3:33967375-33967394 Msa0115190:three_prime_UTR 45.0%
!! TCAAAAAATAATAAAAAATT+AGG - chr1_3:33962074-33962093 None:intergenic 5.0%
!!! AATATTATTTTAAAACAATT+TGG - chr1_3:33964816-33964835 None:intergenic 5.0%
TGCAGCTAATGCTTCATCGG+CGG + chr1_3:33962421-33962440 Msa0115190:CDS 50.0%
AGATGCGGAGGAACATAAGC+CGG - chr1_3:33962461-33962480 None:intergenic 50.0%
TAACCGATCAATGGCTGCTC+CGG + chr1_3:33962484-33962503 Msa0115190:CDS 50.0%
GGTGGCTAATGATAGGGGTT+TGG + chr1_3:33962523-33962542 Msa0115190:CDS 50.0%
!! GGGTTTGGTGGGTTTAACAG+AGG + chr1_3:33962629-33962648 Msa0115190:CDS 50.0%
TGGGTTTAACAGAGGAGGAG+CGG + chr1_3:33962637-33962656 Msa0115190:CDS 50.0%
!! GCTATACCGATTTCGCTTGC+TGG + chr1_3:33962911-33962930 Msa0115190:CDS 50.0%
TCTCTCCCAGCAAGCGAAAT+CGG - chr1_3:33962920-33962939 None:intergenic 50.0%
! GCTTGCTGGGAGAGATTTGA+TGG + chr1_3:33962925-33962944 Msa0115190:CDS 50.0%
! TTGATGGCTTGTGCTCAGAC+GGG + chr1_3:33962941-33962960 Msa0115190:CDS 50.0%
GTATGCTCAAAGACCACGTG+TGG + chr1_3:33963021-33963040 Msa0115190:CDS 50.0%
CACTTATCCTGTCCCCTACT+CGG + chr1_3:33963065-33963084 Msa0115190:CDS 50.0%
ACTTATCCTGTCCCCTACTC+GGG + chr1_3:33963066-33963085 Msa0115190:CDS 50.0%
GATATTCTGGTGGCAACTCC+AGG + chr1_3:33963412-33963431 Msa0115190:CDS 50.0%
AGCAAATCCACCAATCGTCC+TGG - chr1_3:33963433-33963452 None:intergenic 50.0%
! TGGATTTGCTTGAGAGGGCT+AGG + chr1_3:33963443-33963462 Msa0115190:CDS 50.0%
! GGATTTGCTTGAGAGGGCTA+GGG + chr1_3:33963444-33963463 Msa0115190:CDS 50.0%
TGATGAAGCAGATCGGATGC+TGG + chr1_3:33963498-33963517 Msa0115190:CDS 50.0%
AGCAGATCGGATGCTGGATA+TGG + chr1_3:33963504-33963523 Msa0115190:CDS 50.0%
GCAGATCGGATGCTGGATAT+GGG + chr1_3:33963505-33963524 Msa0115190:CDS 50.0%
GTGGAAATCCTGCTCTGTCA+TGG + chr1_3:33963978-33963997 Msa0115190:intron 50.0%
ATGCATGACCATGACAGAGC+AGG - chr1_3:33963989-33964008 None:intergenic 50.0%
TCACGCCTACACTTTCCTTG+AGG - chr1_3:33964515-33964534 None:intergenic 50.0%
CATCAAGGCCATCCAGATTG+AGG - chr1_3:33964590-33964609 None:intergenic 50.0%
!! TTTCTGGCTGTTGGAAGGGT+TGG + chr1_3:33965312-33965331 Msa0115190:CDS 50.0%
TGACAAGAGAAGCCACCTCA+TGG + chr1_3:33965383-33965402 Msa0115190:CDS 50.0%
TCGCCATGAATGCAAGTTGC+AGG - chr1_3:33965714-33965733 None:intergenic 50.0%
! GGGAGCATGGTGAAAGAGAT+GGG - chr1_3:33966100-33966119 None:intergenic 50.0%
! AGGGAGCATGGTGAAAGAGA+TGG - chr1_3:33966101-33966120 None:intergenic 50.0%
ACCATGCTCCCTTCCTACTT+TGG + chr1_3:33966109-33966128 Msa0115190:intron 50.0%
TCCAAAGTAGGAAGGGAGCA+TGG - chr1_3:33966113-33966132 None:intergenic 50.0%
ATGCTCCCTTCCTACTTTGG+AGG + chr1_3:33966112-33966131 Msa0115190:intron 50.0%
CTCGTCCTGTTCTTCCTATC+CGG - chr1_3:33966757-33966776 None:intergenic 50.0%
ATAGGAAGAACAGGACGAGC+TGG + chr1_3:33966758-33966777 Msa0115190:CDS 50.0%
AGGAGTCCTTGCTGCATAAC+GGG - chr1_3:33966891-33966910 None:intergenic 50.0%
! GTGGTAGAAACAAGCGGACT+GGG + chr1_3:33966918-33966937 Msa0115190:CDS 50.0%
!! TGGTAGAAACAAGCGGACTG+GGG + chr1_3:33966919-33966938 Msa0115190:CDS 50.0%
AACATCACGGCCACCAAAAC+GGG - chr1_3:33966948-33966967 None:intergenic 50.0%
!! GTTTTGGTGGCCGTGATGTT+AGG + chr1_3:33966948-33966967 Msa0115190:CDS 50.0%
! TACTATGGTGGAAACGGTGG+TGG + chr1_3:33967001-33967020 Msa0115190:CDS 50.0%
CTCAAGGGGGCAGATATTAC+TGG + chr1_3:33967313-33967332 Msa0115190:three_prime_UTR 50.0%
!! GAACATAAGCCGGCTTGACC+GGG - chr1_3:33962451-33962470 None:intergenic 55.0%
!! GGAACATAAGCCGGCTTGAC+CGG - chr1_3:33962452-33962471 None:intergenic 55.0%
GATCGGTTACGAAGATGCGG+AGG - chr1_3:33962473-33962492 None:intergenic 55.0%
AGCCACCAAAGAAGGTGGCT+CGG - chr1_3:33962510-33962529 None:intergenic 55.0%
! TTTGGGGCTGGGAGACAAGT+AGG + chr1_3:33962584-33962603 Msa0115190:CDS 55.0%
CAAGTAGGTGGAGGATACGG+TGG + chr1_3:33962599-33962618 Msa0115190:CDS 55.0%
GGGTTTAACAGAGGAGGAGC+GGG + chr1_3:33962638-33962657 Msa0115190:CDS 55.0%
GGTTTAACAGAGGAGGAGCG+GGG + chr1_3:33962639-33962658 Msa0115190:CDS 55.0%
TTCTCCCCACTTGTCTCCAC+AGG - chr1_3:33962785-33962804 None:intergenic 55.0%
GCAAACGTATTCACGGGAGG+CGG - chr1_3:33962812-33962831 None:intergenic 55.0%
GCCTCCCGTGAATACGTTTG+CGG + chr1_3:33962811-33962830 Msa0115190:CDS 55.0%
TCCGCAAACGTATTCACGGG+AGG - chr1_3:33962815-33962834 None:intergenic 55.0%
!! TGAAACCGACACCGGTTCAG+AGG + chr1_3:33962885-33962904 Msa0115190:CDS 55.0%
GCATACCTCTGAACCGGTGT+CGG - chr1_3:33962893-33962912 None:intergenic 55.0%
CTCAAAGACCACGTGTGGCA+AGG + chr1_3:33963026-33963045 Msa0115190:CDS 55.0%
TAAGCAGTCCTTGCCACACG+TGG - chr1_3:33963037-33963056 None:intergenic 55.0%
ACAAGAGAGCTCCCGAGTAG+GGG - chr1_3:33963080-33963099 None:intergenic 55.0%
GACAAGAGAGCTCCCGAGTA+GGG - chr1_3:33963081-33963100 None:intergenic 55.0%
TGACAAGAGAGCTCCCGAGT+AGG - chr1_3:33963082-33963101 None:intergenic 55.0%
TACTCGGGAGCTCTCTTGTC+AGG + chr1_3:33963081-33963100 Msa0115190:CDS 55.0%
GGGAGCTCTCTTGTCAGGTT+GGG + chr1_3:33963086-33963105 Msa0115190:intron 55.0%
! GGAGCTCTCTTGTCAGGTTG+GGG + chr1_3:33963087-33963106 Msa0115190:intron 55.0%
CAAATGGACATGCCTCCTCC+AGG + chr1_3:33963559-33963578 Msa0115190:CDS 55.0%
CATGAAGGAGGTCCATGAGG+TGG - chr1_3:33965398-33965417 None:intergenic 55.0%
GAGCATGAAGGAGGTCCATG+AGG - chr1_3:33965401-33965420 None:intergenic 55.0%
GTGCACCGGATAGGAAGAAC+AGG + chr1_3:33966749-33966768 Msa0115190:CDS 55.0%
GCAGCAAGGACTCCTTATGG+TGG + chr1_3:33966896-33966915 Msa0115190:CDS 55.0%
GCAAGGACTCCTTATGGTGG+TGG + chr1_3:33966899-33966918 Msa0115190:CDS 55.0%
GGTGGTAGAAACAAGCGGAC+TGG + chr1_3:33966917-33966936 Msa0115190:CDS 55.0%
!! GGTAGAAACAAGCGGACTGG+GGG + chr1_3:33966920-33966939 Msa0115190:CDS 55.0%
TGGTGGCCGTGATGTTAGGA+AGG + chr1_3:33966952-33966971 Msa0115190:CDS 55.0%
! GGTGGAAACGGTGGTGGTTA+TGG + chr1_3:33967007-33967026 Msa0115190:CDS 55.0%
GGTGTTCCTGCCAGTTATGG+CGG + chr1_3:33967028-33967047 Msa0115190:CDS 55.0%
! TTCCTGCCAGTTATGGCGGA+GGG + chr1_3:33967032-33967051 Msa0115190:CDS 55.0%
ACCATACCCTCCGCCATAAC+TGG - chr1_3:33967041-33967060 None:intergenic 55.0%
! TATGGCGGAGGGTATGGTCA+AGG + chr1_3:33967043-33967062 Msa0115190:CDS 55.0%
! ACCAAAGAAGGTGGCTCGGC+CGG - chr1_3:33962506-33962525 None:intergenic 60.0%
GCTGGGAGACAAGTAGGTGG+AGG + chr1_3:33962590-33962609 Msa0115190:CDS 60.0%
GTAGGTGGAGGATACGGTGG+TGG + chr1_3:33962602-33962621 Msa0115190:CDS 60.0%
!! GAGGATACGGTGGTGGTGGT+GGG + chr1_3:33962609-33962628 Msa0115190:CDS 60.0%
!! TACGGTGGTGGTGGTGGGTT+TGG + chr1_3:33962614-33962633 Msa0115190:CDS 60.0%
!! GTGGTGGTGGTGGGTTTGGT+GGG + chr1_3:33962618-33962637 Msa0115190:CDS 60.0%
AACAGAGGAGGAGCGGGGAA+TGG + chr1_3:33962644-33962663 Msa0115190:CDS 60.0%
ACAGAGGAGGAGCGGGGAAT+GGG + chr1_3:33962645-33962664 Msa0115190:CDS 60.0%
TGTGGGTGGAGGAAGACGTG+AGG + chr1_3:33962676-33962695 Msa0115190:CDS 60.0%
! GCTTGTGCTCAGACGGGTTC+AGG + chr1_3:33962947-33962966 Msa0115190:CDS 60.0%
GGGGACAGGATAAGTGCGAG+AGG - chr1_3:33963061-33963080 None:intergenic 60.0%
CGGGAGCTCTCTTGTCAGGT+TGG + chr1_3:33963085-33963104 Msa0115190:intron 60.0%
!! AGGAGCACCGATCACCCAAC+AGG + chr1_3:33963261-33963280 Msa0115190:CDS 60.0%
CAGTTGCGGGAGCTTGAGAG+AGG + chr1_3:33963385-33963404 Msa0115190:intron 60.0%
GGTGGCAACTCCAGGACGAT+TGG + chr1_3:33963420-33963439 Msa0115190:CDS 60.0%
GGCAACTCCAGGACGATTGG+TGG + chr1_3:33963423-33963442 Msa0115190:CDS 60.0%
GTCTGTCTCATGCCTGGAGG+AGG - chr1_3:33963574-33963593 None:intergenic 60.0%
AGCGTCTGTCTCATGCCTGG+AGG - chr1_3:33963577-33963596 None:intergenic 60.0%
AGCAGCGTCTGTCTCATGCC+TGG - chr1_3:33963580-33963599 None:intergenic 60.0%
GCATGAGGATCTGTCCTCCC+TGG + chr1_3:33963674-33963693 Msa0115190:intron 60.0%
GCAACGGATGTTGCAGCACG+TGG + chr1_3:33966662-33966681 Msa0115190:CDS 60.0%
!! GCATAACGGGTGAGCCATGC+AGG - chr1_3:33966878-33966897 None:intergenic 60.0%
GGCTCACCCGTTATGCAGCA+AGG + chr1_3:33966882-33966901 Msa0115190:CDS 60.0%
GTTCCTGCCAGTTATGGCGG+AGG + chr1_3:33967031-33967050 Msa0115190:CDS 60.0%
TACCCTCCGCCATAACTGGC+AGG - chr1_3:33967037-33967056 None:intergenic 60.0%
! GCCAGTTATGGCGGAGGGTA+TGG + chr1_3:33967037-33967056 Msa0115190:CDS 60.0%
CGGCCGGAGCAGCCATTGAT+CGG - chr1_3:33962490-33962509 None:intergenic 65.0%
TCCGGCCGAGCCACCTTCTT+TGG + chr1_3:33962502-33962521 Msa0115190:CDS 65.0%
GGCCGAGCCACCTTCTTTGG+TGG + chr1_3:33962505-33962524 Msa0115190:CDS 65.0%
GGGGCTGGGAGACAAGTAGG+TGG + chr1_3:33962587-33962606 Msa0115190:CDS 65.0%
! GGTGGAGGATACGGTGGTGG+TGG + chr1_3:33962605-33962624 Msa0115190:CDS 65.0%
!! GGAGGATACGGTGGTGGTGG+TGG + chr1_3:33962608-33962627 Msa0115190:CDS 65.0%
!! GGTGGTGGTGGTGGGTTTGG+TGG + chr1_3:33962617-33962636 Msa0115190:CDS 65.0%
AGGAGGAGCGGGGAATGGGA+GGG + chr1_3:33962649-33962668 Msa0115190:CDS 65.0%
! GGGAATGGGAGGGAGCGTGT+GGG + chr1_3:33962659-33962678 Msa0115190:CDS 65.0%
! AATGGGAGGGAGCGTGTGGG+TGG + chr1_3:33962662-33962681 Msa0115190:CDS 65.0%
AGAGCTCCCGAGTAGGGGAC+AGG - chr1_3:33963075-33963094 None:intergenic 65.0%
! ACTGGGGGAGCCCGTTTTGG+TGG + chr1_3:33966935-33966954 Msa0115190:CDS 65.0%
GAGGAGGAGCGGGGAATGGG+AGG + chr1_3:33962648-33962667 Msa0115190:CDS 70.0%
! GGGGAATGGGAGGGAGCGTG+TGG + chr1_3:33962658-33962677 Msa0115190:CDS 70.0%
!! CGGACTGGGGGAGCCCGTTT+TGG + chr1_3:33966932-33966951 Msa0115190:CDS 70.0%
TGCTTCATCGGCGGCGCGCC+CGG + chr1_3:33962430-33962449 Msa0115190:CDS 75.0%
! GGGAGGGAGCGTGTGGGTGG+AGG + chr1_3:33962665-33962684 Msa0115190:CDS 75.0%
! GGCGGCGCGCCCGGTCAAGC+CGG + chr1_3:33962439-33962458 Msa0115190:CDS 85.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 33961843 33967560 33961843 ID=Msa0115190;Name=Msa0115190
chr1_3 mRNA 33961843 33967560 33961843 ID=Msa0115190-mRNA-1;Parent=Msa0115190;Name=Msa0115190-mRNA-1;_AED=0.08;_eAED=0.08;_QI=285|1|1|1|0.83|0.71|7|473|605
chr1_3 exon 33961843 33962021 33961843 ID=Msa0115190-mRNA-1:exon:10586;Parent=Msa0115190-mRNA-1
chr1_3 exon 33962268 33963102 33962268 ID=Msa0115190-mRNA-1:exon:10587;Parent=Msa0115190-mRNA-1
chr1_3 exon 33963199 33963282 33963199 ID=Msa0115190-mRNA-1:exon:10588;Parent=Msa0115190-mRNA-1
chr1_3 exon 33963388 33963630 33963388 ID=Msa0115190-mRNA-1:exon:10589;Parent=Msa0115190-mRNA-1
chr1_3 exon 33965279 33965446 33965279 ID=Msa0115190-mRNA-1:exon:10590;Parent=Msa0115190-mRNA-1
chr1_3 exon 33965633 33965746 33965633 ID=Msa0115190-mRNA-1:exon:10591;Parent=Msa0115190-mRNA-1
chr1_3 exon 33966608 33967560 33966608 ID=Msa0115190-mRNA-1:exon:10592;Parent=Msa0115190-mRNA-1
chr1_3 five_prime_UTR 33961843 33962021 33961843 ID=Msa0115190-mRNA-1:five_prime_utr;Parent=Msa0115190-mRNA-1
chr1_3 five_prime_UTR 33962268 33962373 33962268 ID=Msa0115190-mRNA-1:five_prime_utr;Parent=Msa0115190-mRNA-1
chr1_3 CDS 33962374 33963102 33962374 ID=Msa0115190-mRNA-1:cds;Parent=Msa0115190-mRNA-1
chr1_3 CDS 33963199 33963282 33963199 ID=Msa0115190-mRNA-1:cds;Parent=Msa0115190-mRNA-1
chr1_3 CDS 33963388 33963630 33963388 ID=Msa0115190-mRNA-1:cds;Parent=Msa0115190-mRNA-1
chr1_3 CDS 33965279 33965446 33965279 ID=Msa0115190-mRNA-1:cds;Parent=Msa0115190-mRNA-1
chr1_3 CDS 33965633 33965746 33965633 ID=Msa0115190-mRNA-1:cds;Parent=Msa0115190-mRNA-1
chr1_3 CDS 33966608 33967087 33966608 ID=Msa0115190-mRNA-1:cds;Parent=Msa0115190-mRNA-1
chr1_3 three_prime_UTR 33967088 33967560 33967088 ID=Msa0115190-mRNA-1:three_prime_utr;Parent=Msa0115190-mRNA-1
Gene Sequence

>Msa0115190

ATGTCTGCAACTTTGAGAACAGCTACATGGGCAGATGCTGCTGACAATGCAGCTAATGCTTCATCGGCGGCGCGCCCGGTCAAGCCGGCTTATGTTCCTCCGCATCTTCGTAACCGATCAATGGCTGCTCCGGCCGAGCCACCTTCTTTGGTGGCTAATGATAGGGGTTTGGGTAATAATTGGGGTAGTTCGTCGAATTTTAAGCAGGATTTTGGGGCTGGGAGACAAGTAGGTGGAGGATACGGTGGTGGTGGTGGGTTTGGTGGGTTTAACAGAGGAGGAGCGGGGAATGGGAGGGAGCGTGTGGGTGGAGGAAGACGTGAGGCGAATCCGTTTGAGAATGATGTTGATGAACCGTTTACTGAGCAAGAGAATACGGGGATTAACTTTGATGCTTATGATGATATTCCTGTGGAGACAAGTGGGGAGAATGTTCCGCCTCCCGTGAATACGTTTGCGGAAATAGATTTAGGTGATGCGTTGAATCAGAATATAAAGAGATGTAAGTATGTGAAACCGACACCGGTTCAGAGGTATGCTATACCGATTTCGCTTGCTGGGAGAGATTTGATGGCTTGTGCTCAGACGGGTTCAGGAAAGACAGCTGCATTTTGCTTTCCGATTATAAGCGGAATCCTTAGGGAGCAGTATGCTCAAAGACCACGTGTGGCAAGGACTGCTTATCCTCTCGCACTTATCCTGTCCCCTACTCGGGAGCTCTCTTGTCAGATACATGACGAGGCCAAGAAGTTTTCTTATCAAACAGGGGTCAAGGTCGTAGTTGCTTATGGAGGAGCACCGATCACCCAACAGTTGCGGGAGCTTGAGAGAGGTGTTGATATTCTGGTGGCAACTCCAGGACGATTGGTGGATTTGCTTGAGAGGGCTAGGGTGTCATTGCAGATGATAAGATATCTAGCTCTTGATGAAGCAGATCGGATGCTGGATATGGGTTTTGAGCCTCAAATAAGAAAGATAGTTGAACAAATGGACATGCCTCCTCCAGGCATGAGACAGACGCTGCTGTTTAGTGCAACATTTCCCAAAGAGATACAGAGACTTGCTTCAGATTTTCTTGCTAGTTATATCTTTCTGGCTGTTGGAAGGGTTGGTTCAAGTACCGATCTAATTGCTCAAAGAGTAGAATATGTGCTGGAGTCTGACAAGAGAAGCCACCTCATGGACCTCCTTCATGCTCAGAGAGAAAATGATGTGAATGGCAAGCAAGGTCTGACTTTAGTGTTTGTGGAAACGAAGAAAGGTGCTGATGCATTGGAACACTGCTTGTGTGTTAACGGGTTTCCTGCAACTTGCATTCATGGCGACAGAACACAGCAAGAAAGAGAACAAGCATTGAGATCATTCAAGACTGGAAACACTCCAATTCTAGTGGCAACGGATGTTGCAGCACGTGGTCTTGATATTCCACGTGTAGCACATGTGGTAAACTTTGATCTTCCCAATGACATTGATGATTATGTGCACCGGATAGGAAGAACAGGACGAGCTGGTAAAATGGGATTAGCAACAGCCTTCTTCAATGACAGTAATTTGTCAATGGCTAAACCATTGGCTGATCTGATGCAAGAGGCAAATCAAGAAGTACCTGCATGGCTCACCCGTTATGCAGCAAGGACTCCTTATGGTGGTGGTAGAAACAAGCGGACTGGGGGAGCCCGTTTTGGTGGCCGTGATGTTAGGAAGGAGAGCTCATATAATAAAGGAAATGATTACTATGGTGGAAACGGTGGTGGTTATGGTGTTCCTGCCAGTTATGGCGGAGGGTATGGTCAAGGTGTAACAAGTGCTTGGGATTAG
Protein sequence

>Msa0115190

MSATLRTATWADAADNAANASSAARPVKPAYVPPHLRNRSMAAPAEPPSLVANDRGLGNNWGSSSNFKQDFGAGRQVGGGYGGGGGFGGFNRGGAGNGRERVGGGRREANPFENDVDEPFTEQENTGINFDAYDDIPVETSGENVPPPVNTFAEIDLGDALNQNIKRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGILREQYAQRPRVARTAYPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEIQRLASDFLASYIFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQRENDVNGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREQALRSFKTGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNDSNLSMAKPLADLMQEANQEVPAWLTRYAARTPYGGGRNKRTGGARFGGRDVRKESSYNKGNDYYGGNGGGYGVPASYGGGYGQGVTSAWD*