Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153430 | KEH39811.1 | 51.765 | 170 | 47 | 7 | 1 | 138 | 198 | 364 | 1.17e-35 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153430 | A0A072VDZ8 | 51.765 | 170 | 47 | 7 | 1 | 138 | 198 | 364 | 5.59e-36 | 141 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004350 | Msa0153430 | 0.806246 | 9.030301e-50 | -8.615850e-47 |
| Msa0006700 | Msa0153430 | 0.835410 | 1.705533e-56 | -8.615850e-47 |
| Msa0008850 | Msa0153430 | 0.800269 | 1.559753e-48 | -8.615850e-47 |
| Msa0020630 | Msa0153430 | 0.821364 | 4.199302e-53 | -8.615850e-47 |
| Msa0022640 | Msa0153430 | 0.802709 | 4.932935e-49 | -8.615850e-47 |
| Msa0033340 | Msa0153430 | 0.817837 | 2.680095e-52 | -8.615850e-47 |
| Msa0040580 | Msa0153430 | 0.837807 | 4.180653e-57 | -8.615850e-47 |
| Msa0044710 | Msa0153430 | 0.806060 | 9.878980e-50 | -8.615850e-47 |
| Msa0055280 | Msa0153430 | 0.866377 | 2.982138e-65 | -8.615850e-47 |
| Msa0068410 | Msa0153430 | 0.823261 | 1.523746e-53 | -8.615850e-47 |
| Msa0074080 | Msa0153430 | 0.824177 | 9.294633e-54 | -8.615850e-47 |
| Msa0086090 | Msa0153430 | 0.803356 | 3.625461e-49 | -8.615850e-47 |
| Msa0088550 | Msa0153430 | 0.842093 | 3.191640e-58 | -8.615850e-47 |
| Msa0094100 | Msa0153430 | 0.812199 | 4.780945e-51 | -8.615850e-47 |
| Msa0101060 | Msa0153430 | 0.850953 | 1.216585e-60 | -8.615850e-47 |
| Msa0101650 | Msa0153430 | 0.805022 | 1.631679e-49 | -8.615850e-47 |
| Msa0105340 | Msa0153430 | 0.809815 | 1.570189e-50 | -8.615850e-47 |
| Msa0111310 | Msa0153430 | 0.812175 | 4.839674e-51 | -8.615850e-47 |
| Msa0114250 | Msa0153430 | 0.832939 | 7.099898e-56 | -8.615850e-47 |
| Msa0124110 | Msa0153430 | 0.801726 | 7.859880e-49 | -8.615850e-47 |
| Msa0135360 | Msa0153430 | 0.840107 | 1.060882e-57 | -8.615850e-47 |
| Msa0140910 | Msa0153430 | 0.818697 | 1.712533e-52 | -8.615850e-47 |
| Msa0141550 | Msa0153430 | 0.828677 | 7.872441e-55 | -8.615850e-47 |
| Msa0147550 | Msa0153430 | 0.819002 | 1.459926e-52 | -8.615850e-47 |
| Msa0151690 | Msa0153430 | 0.800855 | 1.184897e-48 | -8.615850e-47 |
| Msa0153430 | Msa0153440 | 0.886055 | 4.770503e-72 | -8.615850e-47 |
| Msa0153430 | Msa0159750 | 0.821360 | 4.209421e-53 | -8.615850e-47 |
| Msa0153430 | Msa0161680 | 0.801713 | 7.907078e-49 | -8.615850e-47 |
| Msa0153430 | Msa0179860 | 0.827795 | 1.284262e-54 | -8.615850e-47 |
| Msa0153430 | Msa0182930 | 0.817534 | 3.137277e-52 | -8.615850e-47 |
| Msa0153430 | Msa0183610 | 0.801721 | 7.878018e-49 | -8.615850e-47 |
| Msa0153430 | Msa0185640 | -0.822663 | 2.100514e-53 | -8.615850e-47 |
| Msa0153430 | Msa0193010 | 0.816086 | 6.628490e-52 | -8.615850e-47 |
| Msa0153430 | Msa0193760 | 0.862709 | 4.182697e-64 | -8.615850e-47 |
| Msa0153430 | Msa0198440 | 0.844258 | 8.451134e-59 | -8.615850e-47 |
| Msa0153430 | Msa0203070 | 0.803123 | 4.051358e-49 | -8.615850e-47 |
| Msa0153430 | Msa0208630 | 0.823208 | 1.567807e-53 | -8.615850e-47 |
| Msa0153430 | Msa0211010 | 0.802748 | 4.842042e-49 | -8.615850e-47 |
| Msa0153430 | Msa0211670 | 0.803226 | 3.856266e-49 | -8.615850e-47 |
| Msa0153430 | Msa0212210 | 0.816234 | 6.141700e-52 | -8.615850e-47 |
| Msa0153430 | Msa0213080 | 0.833888 | 4.116292e-56 | -8.615850e-47 |
| Msa0153430 | Msa0213090 | 0.817852 | 2.660241e-52 | -8.615850e-47 |
| Msa0153430 | Msa0222660 | 0.806217 | 9.158250e-50 | -8.615850e-47 |
| Msa0153430 | Msa0223290 | 0.807675 | 4.502624e-50 | -8.615850e-47 |
| Msa0153430 | Msa0223380 | 0.819330 | 1.228831e-52 | -8.615850e-47 |
| Msa0153430 | Msa0230770 | 0.803025 | 4.245099e-49 | -8.615850e-47 |
| Msa0153430 | Msa0232860 | 0.852741 | 3.783127e-61 | -8.615850e-47 |
| Msa0153430 | Msa0235190 | 0.810568 | 1.080558e-50 | -8.615850e-47 |
| Msa0153430 | Msa0235550 | 0.859792 | 3.236179e-63 | -8.615850e-47 |
| Msa0153430 | Msa0240780 | 0.803395 | 3.557805e-49 | -8.615850e-47 |
| Msa0153430 | Msa0242280 | 0.810020 | 1.418500e-50 | -8.615850e-47 |
| Msa0153430 | Msa0252180 | 0.815854 | 7.466729e-52 | -8.615850e-47 |
| Msa0153430 | Msa0253370 | 0.839775 | 1.295318e-57 | -8.615850e-47 |
| Msa0153430 | Msa0254190 | 0.801286 | 9.673058e-49 | -8.615850e-47 |
| Msa0153430 | Msa0261280 | 0.816801 | 4.585435e-52 | -8.615850e-47 |
| Msa0153430 | Msa0264050 | 0.807639 | 4.581412e-50 | -8.615850e-47 |
| Msa0153430 | Msa0264940 | -0.829507 | 4.953710e-55 | -8.615850e-47 |
| Msa0153430 | Msa0265210 | 0.803789 | 2.947826e-49 | -8.615850e-47 |
| Msa0153430 | Msa0265820 | 0.823516 | 1.328218e-53 | -8.615850e-47 |
| Msa0153430 | Msa0269360 | 0.811610 | 6.422211e-51 | -8.615850e-47 |
| Msa0153430 | Msa0270270 | 0.808819 | 2.567794e-50 | -8.615850e-47 |
| Msa0153430 | Msa0274520 | 0.858732 | 6.728878e-63 | -8.615850e-47 |
| Msa0153430 | Msa0278670 | 0.843154 | 1.668131e-58 | -8.615850e-47 |
| Msa0153430 | Msa0281940 | 0.802829 | 4.659222e-49 | -8.615850e-47 |
| Msa0153430 | Msa0282170 | 0.839102 | 1.936775e-57 | -8.615850e-47 |
| Msa0153430 | Msa0284810 | 0.811103 | 8.276948e-51 | -8.615850e-47 |
| Msa0153430 | Msa0284870 | 0.811508 | 6.760779e-51 | -8.615850e-47 |
| Msa0153430 | Msa0288240 | 0.802635 | 5.108715e-49 | -8.615850e-47 |
| Msa0153430 | Msa0290650 | 0.802791 | 4.743627e-49 | -8.615850e-47 |
| Msa0153430 | Msa0292180 | 0.830685 | 2.555173e-55 | -8.615850e-47 |
| Msa0153430 | Msa0296610 | 0.814299 | 1.653264e-51 | -8.615850e-47 |
| Msa0153430 | Msa0301980 | 0.801574 | 8.442356e-49 | -8.615850e-47 |
| Msa0153430 | Msa0302990 | -0.832301 | 1.022119e-55 | -8.615850e-47 |
| Msa0153430 | Msa0304990 | 0.811719 | 6.081945e-51 | -8.615850e-47 |
| Msa0153430 | Msa0313920 | 0.804213 | 2.406315e-49 | -8.615850e-47 |
| Msa0153430 | Msa0318070 | 0.833848 | 4.211857e-56 | -8.615850e-47 |
| Msa0153430 | Msa0321800 | 0.823672 | 1.220828e-53 | -8.615850e-47 |
| Msa0153430 | Msa0323550 | 0.804523 | 2.073675e-49 | -8.615850e-47 |
| Msa0153430 | Msa0323630 | 0.810239 | 1.272231e-50 | -8.615850e-47 |
| Msa0153430 | Msa0326670 | 0.809243 | 2.083834e-50 | -8.615850e-47 |
| Msa0153430 | Msa0329550 | 0.826168 | 3.145396e-54 | -8.615850e-47 |
| Msa0153430 | Msa0330270 | 0.807190 | 5.704881e-50 | -8.615850e-47 |
| Msa0153430 | Msa0330400 | 0.836324 | 1.000293e-56 | -8.615850e-47 |
| Msa0153430 | Msa0339310 | 0.800501 | 1.399373e-48 | -8.615850e-47 |
| Msa0153430 | Msa0342340 | -0.821990 | 3.009148e-53 | -8.615850e-47 |
| Msa0153430 | Msa0343590 | 0.831223 | 1.885243e-55 | -8.615850e-47 |
| Msa0153430 | Msa0347180 | 0.807196 | 5.689354e-50 | -8.615850e-47 |
| Msa0153430 | Msa0350670 | 0.812712 | 3.694101e-51 | -8.615850e-47 |
| Msa0153430 | Msa0354390 | 0.830578 | 2.713355e-55 | -8.615850e-47 |
| Msa0153430 | Msa0357380 | 0.823073 | 1.685364e-53 | -8.615850e-47 |
| Msa0153430 | Msa0357390 | 0.818934 | 1.512942e-52 | -8.615850e-47 |
| Msa0153430 | Msa0363440 | 0.812930 | 3.309379e-51 | -8.615850e-47 |
| Msa0153430 | Msa0363460 | 0.833526 | 5.070052e-56 | -8.615850e-47 |
| Msa0153430 | Msa0366470 | 0.805682 | 1.186726e-49 | -8.615850e-47 |
| Msa0153430 | Msa0371540 | 0.804227 | 2.390645e-49 | -8.615850e-47 |
| Msa0153430 | Msa0371570 | 0.836816 | 7.496747e-57 | -8.615850e-47 |
| Msa0153430 | Msa0371610 | 0.803847 | 2.866966e-49 | -8.615850e-47 |
| Msa0153430 | Msa0377280 | 0.803742 | 3.014511e-49 | -8.615850e-47 |
| Msa0153430 | Msa0389030 | 0.843045 | 1.783118e-58 | -8.615850e-47 |
| Msa0153430 | Msa0389050 | 0.869660 | 2.621624e-66 | -8.615850e-47 |
| Msa0153430 | Msa0389060 | 0.849561 | 2.988965e-60 | -8.615850e-47 |
| Msa0153430 | Msa0389310 | 0.829620 | 4.648058e-55 | -8.615850e-47 |
| Msa0153430 | Msa0391050 | 0.817140 | 3.848542e-52 | -8.615850e-47 |
| Msa0153430 | Msa0404220 | 0.812970 | 3.242651e-51 | -8.615850e-47 |
| Msa0153430 | Msa0404690 | 0.804161 | 2.467409e-49 | -8.615850e-47 |
| Msa0153430 | Msa0409820 | 0.835218 | 1.907493e-56 | -8.615850e-47 |
| Msa0153430 | Msa0411000 | 0.835999 | 1.209673e-56 | -8.615850e-47 |
| Msa0153430 | Msa0413740 | 0.827911 | 1.204364e-54 | -8.615850e-47 |
| Msa0153430 | Msa0414070 | 0.810751 | 9.864040e-51 | -8.615850e-47 |
| Msa0153430 | Msa0419620 | -0.817346 | 3.458841e-52 | -8.615850e-47 |
| Msa0153430 | Msa0419970 | 0.816006 | 6.906085e-52 | -8.615850e-47 |
| Msa0153430 | Msa0419990 | 0.858683 | 6.959528e-63 | -8.615850e-47 |
| Msa0153430 | Msa0425890 | 0.801609 | 8.305783e-49 | -8.615850e-47 |
| Msa0153430 | Msa0426110 | 0.815955 | 7.090165e-52 | -8.615850e-47 |
| Msa0153430 | Msa0431520 | 0.840223 | 9.899028e-58 | -8.615850e-47 |
| Msa0153430 | Msa0431830 | 0.859723 | 3.394536e-63 | -8.615850e-47 |
| Msa0153430 | Msa0442160 | 0.808095 | 3.664562e-50 | -8.615850e-47 |
| Msa0153430 | Msa0442850 | 0.818534 | 1.864437e-52 | -8.615850e-47 |
| Msa0153430 | Msa0445040 | 0.810772 | 9.762853e-51 | -8.615850e-47 |
| Msa0153430 | Msa0448120 | 0.824013 | 1.015976e-53 | -8.615850e-47 |
| Msa0153430 | Msa0452410 | 0.814210 | 1.729995e-51 | -8.615850e-47 |
| Msa0153430 | Msa0452480 | 0.806413 | 8.328095e-50 | -8.615850e-47 |
| Msa0153430 | Msa0455230 | 0.835725 | 1.419726e-56 | -8.615850e-47 |
| Msa0153430 | Msa0455260 | 0.834601 | 2.727419e-56 | -8.615850e-47 |
| Msa0153430 | Msa0458790 | 0.821605 | 3.694531e-53 | -8.615850e-47 |
| Msa0153430 | Msa0462590 | 0.816154 | 6.401682e-52 | -8.615850e-47 |
| Msa0153430 | Msa0465930 | 0.842509 | 2.476805e-58 | -8.615850e-47 |
| Msa0153430 | Msa0465970 | 0.826975 | 2.019727e-54 | -8.615850e-47 |
| Msa0153430 | Msa0466060 | 0.814738 | 1.322293e-51 | -8.615850e-47 |
| Msa0153430 | Msa0480320 | 0.807104 | 5.949493e-50 | -8.615850e-47 |
| Msa0153430 | Msa0498830 | 0.812242 | 4.678115e-51 | -8.615850e-47 |
| Msa0153430 | Msa0499710 | 0.809468 | 1.864694e-50 | -8.615850e-47 |
| Msa0153430 | Msa0502500 | 0.828764 | 7.497928e-55 | -8.615850e-47 |
| Msa0153430 | Msa0502910 | 0.835951 | 1.244078e-56 | -8.615850e-47 |
| Msa0153430 | Msa0505390 | 0.830852 | 2.325144e-55 | -8.615850e-47 |
| Msa0153430 | Msa0505660 | 0.806967 | 6.361330e-50 | -8.615850e-47 |
| Msa0153430 | Msa0511720 | -0.807094 | 5.977386e-50 | -8.615850e-47 |
| Msa0153430 | Msa0517330 | 0.828117 | 1.074277e-54 | -8.615850e-47 |
| Msa0153430 | Msa0517340 | 0.810948 | 8.939988e-51 | -8.615850e-47 |
| Msa0153430 | Msa0520220 | 0.823928 | 1.063383e-53 | -8.615850e-47 |
| Msa0153430 | Msa0524050 | 0.808228 | 3.433773e-50 | -8.615850e-47 |
| Msa0153430 | Msa0524890 | -0.800595 | 1.338711e-48 | -8.615850e-47 |
| Msa0153430 | Msa0530930 | 0.816879 | 4.403313e-52 | -8.615850e-47 |
| Msa0153430 | Msa0530950 | 0.809599 | 1.747534e-50 | -8.615850e-47 |
| Msa0153430 | Msa0540070 | 0.830771 | 2.434163e-55 | -8.615850e-47 |
| Msa0153430 | Msa0540320 | 0.803003 | 4.289630e-49 | -8.615850e-47 |
| Msa0153430 | Msa0543900 | 0.803816 | 2.910600e-49 | -8.615850e-47 |
| Msa0153430 | Msa0549740 | 0.849468 | 3.172864e-60 | -8.615850e-47 |
| Msa0153430 | Msa0568610 | 0.804537 | 2.060096e-49 | -8.615850e-47 |
| Msa0153430 | Msa0577230 | 0.817381 | 3.396979e-52 | -8.615850e-47 |
| Msa0153430 | Msa0579390 | 0.800399 | 1.467545e-48 | -8.615850e-47 |
| Msa0153430 | Msa0582110 | 0.817356 | 3.440396e-52 | -8.615850e-47 |
| Msa0153430 | Msa0589610 | 0.809939 | 1.476363e-50 | -8.615850e-47 |
| Msa0153430 | Msa0592540 | 0.804339 | 2.265118e-49 | -8.615850e-47 |
| Msa0153430 | Msa0594430 | 0.800593 | 1.340143e-48 | -8.615850e-47 |
| Msa0153430 | Msa0594440 | 0.836330 | 9.967434e-57 | -8.615850e-47 |
| Msa0153430 | Msa0596100 | 0.808874 | 2.498624e-50 | -8.615850e-47 |
| Msa0153430 | Msa0598250 | 0.811655 | 6.280360e-51 | -8.615850e-47 |
| Msa0153430 | Msa0599250 | 0.804390 | 2.210900e-49 | -8.615850e-47 |
| Msa0153430 | Msa0605230 | 0.817555 | 3.102658e-52 | -8.615850e-47 |
| Msa0153430 | Msa0617370 | 0.840322 | 9.322119e-58 | -8.615850e-47 |
| Msa0153430 | Msa0617830 | 0.812161 | 4.872986e-51 | -8.615850e-47 |
| Msa0153430 | Msa0620640 | 0.855573 | 5.762663e-62 | -8.615850e-47 |
| Msa0153430 | Msa0621890 | 0.804511 | 2.085377e-49 | -8.615850e-47 |
| Msa0153430 | Msa0624730 | 0.810020 | 1.418811e-50 | -8.615850e-47 |
| Msa0153430 | Msa0626230 | 0.812596 | 3.915399e-51 | -8.615850e-47 |
| Msa0153430 | Msa0628100 | 0.806982 | 6.313245e-50 | -8.615850e-47 |
| Msa0153430 | Msa0629890 | 0.811474 | 6.875404e-51 | -8.615850e-47 |
| Msa0153430 | Msa0630060 | 0.806047 | 9.944947e-50 | -8.615850e-47 |
| Msa0153430 | Msa0632540 | 0.809658 | 1.697103e-50 | -8.615850e-47 |
| Msa0153430 | Msa0632560 | 0.808314 | 3.291063e-50 | -8.615850e-47 |
| Msa0153430 | Msa0638280 | 0.826911 | 2.091998e-54 | -8.615850e-47 |
| Msa0153430 | Msa0638320 | 0.829075 | 6.303716e-55 | -8.615850e-47 |
| Msa0153430 | Msa0639030 | 0.814813 | 1.272360e-51 | -8.615850e-47 |
| Msa0153430 | Msa0646390 | 0.824661 | 7.151340e-54 | -8.615850e-47 |
| Msa0153430 | Msa0647000 | 0.814374 | 1.591989e-51 | -8.615850e-47 |
| Msa0153430 | Msa0651790 | 0.800206 | 1.606672e-48 | -8.615850e-47 |
| Msa0153430 | Msa0656270 | 0.826430 | 2.724268e-54 | -8.615850e-47 |
| Msa0153430 | Msa0656680 | 0.808630 | 2.818753e-50 | -8.615850e-47 |
| Msa0153430 | Msa0672120 | 0.807441 | 5.046702e-50 | -8.615850e-47 |
| Msa0153430 | Msa0672810 | 0.847654 | 1.008871e-59 | -8.615850e-47 |
| Msa0153430 | Msa0672850 | 0.825781 | 3.887488e-54 | -8.615850e-47 |
| Msa0153430 | Msa0677270 | 0.827160 | 1.824020e-54 | -8.615850e-47 |
| Msa0153430 | Msa0678240 | 0.828856 | 7.124747e-55 | -8.615850e-47 |
| Msa0153430 | Msa0694250 | 0.810181 | 1.309698e-50 | -8.615850e-47 |
| Msa0153430 | Msa0697140 | 0.830843 | 2.337082e-55 | -8.615850e-47 |
| Msa0153430 | Msa0697600 | 0.807800 | 4.235408e-50 | -8.615850e-47 |
| Msa0153430 | Msa0700070 | 0.834162 | 3.514541e-56 | -8.615850e-47 |
| Msa0153430 | Msa0701770 | 0.804984 | 1.661620e-49 | -8.615850e-47 |
| Msa0153430 | Msa0714600 | 0.820102 | 8.191515e-53 | -8.615850e-47 |
| Msa0153430 | Msa0719340 | 0.824455 | 7.998630e-54 | -8.615850e-47 |
| Msa0153430 | Msa0719970 | 0.809218 | 2.109468e-50 | -8.615850e-47 |
| Msa0153430 | Msa0722930 | 0.843025 | 1.806144e-58 | -8.615850e-47 |
| Msa0153430 | Msa0723140 | 0.838809 | 2.306161e-57 | -8.615850e-47 |
| Msa0153430 | Msa0724050 | 0.805562 | 1.257054e-49 | -8.615850e-47 |
| Msa0153430 | Msa0726610 | 0.825885 | 3.671577e-54 | -8.615850e-47 |
| Msa0153430 | Msa0743640 | 0.822617 | 2.151955e-53 | -8.615850e-47 |
| Msa0153430 | Msa0750380 | 0.828576 | 8.327952e-55 | -8.615850e-47 |
| Msa0153430 | Msa0752580 | 0.846638 | 1.916005e-59 | -8.615850e-47 |
| Msa0153430 | Msa0754500 | 0.840774 | 7.100049e-58 | -8.615850e-47 |
| Msa0153430 | Msa0760890 | 0.834928 | 2.256730e-56 | -8.615850e-47 |
| Msa0153430 | Msa0772150 | 0.828866 | 7.084304e-55 | -8.615850e-47 |
| Msa0153430 | Msa0773610 | 0.853645 | 2.083747e-61 | -8.615850e-47 |
| Msa0153430 | Msa0782080 | 0.807746 | 4.348871e-50 | -8.615850e-47 |
| Msa0153430 | Msa0782470 | 0.810941 | 8.973444e-51 | -8.615850e-47 |
| Msa0153430 | Msa0784580 | 0.809258 | 2.068062e-50 | -8.615850e-47 |
| Msa0153430 | Msa0787720 | 0.821368 | 4.190078e-53 | -8.615850e-47 |
| Msa0153430 | Msa0788360 | 0.806004 | 1.015387e-49 | -8.615850e-47 |
| Msa0153430 | Msa0790230 | 0.800027 | 1.747442e-48 | -8.615850e-47 |
| Msa0153430 | Msa0792510 | 0.834215 | 3.409307e-56 | -8.615850e-47 |
| Msa0153430 | Msa0801100 | 0.805697 | 1.177786e-49 | -8.615850e-47 |
| Msa0153430 | Msa0811000 | 0.835973 | 1.228626e-56 | -8.615850e-47 |
| Msa0153430 | Msa0811510 | 0.806789 | 6.936206e-50 | -8.615850e-47 |
| Msa0153430 | Msa0813190 | 0.803052 | 4.189559e-49 | -8.615850e-47 |
| Msa0153430 | Msa0817860 | 0.816652 | 4.952702e-52 | -8.615850e-47 |
| Msa0153430 | Msa0818030 | 0.802379 | 5.768753e-49 | -8.615850e-47 |
| Msa0153430 | Msa0819740 | 0.827598 | 1.432419e-54 | -8.615850e-47 |
| Msa0153430 | Msa0828570 | 0.832256 | 1.048366e-55 | -8.615850e-47 |
| Msa0153430 | Msa0830720 | 0.825637 | 4.205128e-54 | -8.615850e-47 |
| Msa0153430 | Msa0830900 | 0.835970 | 1.230493e-56 | -8.615850e-47 |
| Msa0153430 | Msa0842050 | 0.813923 | 2.001848e-51 | -8.615850e-47 |
| Msa0153430 | Msa0843280 | 0.851072 | 1.125911e-60 | -8.615850e-47 |
| Msa0153430 | Msa0847200 | 0.837728 | 4.380720e-57 | -8.615850e-47 |
| Msa0153430 | Msa0853500 | 0.803940 | 2.741873e-49 | -8.615850e-47 |
| Msa0153430 | Msa0854620 | 0.830580 | 2.711168e-55 | -8.615850e-47 |
| Msa0153430 | Msa0862020 | 0.826401 | 2.768692e-54 | -8.615850e-47 |
| Msa0153430 | Msa0863760 | 0.820250 | 7.573230e-53 | -8.615850e-47 |
| Msa0153430 | Msa0872420 | 0.805616 | 1.224682e-49 | -8.615850e-47 |
| Msa0153430 | Msa0882010 | 0.830151 | 3.451867e-55 | -8.615850e-47 |
| Msa0153430 | Msa0883410 | 0.803971 | 2.702560e-49 | -8.615850e-47 |
| Msa0153430 | Msa0883660 | 0.823397 | 1.415742e-53 | -8.615850e-47 |
| Msa0153430 | Msa0883670 | 0.811741 | 6.015289e-51 | -8.615850e-47 |
| Msa0153430 | Msa0885100 | 0.825570 | 4.362281e-54 | -8.615850e-47 |
| Msa0153430 | Msa0885170 | 0.809914 | 1.495028e-50 | -8.615850e-47 |
| Msa0153430 | Msa0887000 | 0.809937 | 1.477889e-50 | -8.615850e-47 |
| Msa0153430 | Msa0887070 | 0.821602 | 3.701136e-53 | -8.615850e-47 |
| Msa0153430 | Msa0898350 | 0.809644 | 1.708491e-50 | -8.615850e-47 |
| Msa0153430 | Msa0898370 | 0.820717 | 5.917991e-53 | -8.615850e-47 |
| Msa0153430 | Msa0903730 | 0.834742 | 2.513687e-56 | -8.615850e-47 |
| Msa0153430 | Msa0905720 | 0.803982 | 2.687634e-49 | -8.615850e-47 |
| Msa0153430 | Msa0909710 | 0.819463 | 1.146468e-52 | -8.615850e-47 |
| Msa0153430 | Msa0936430 | 0.812169 | 4.853866e-51 | -8.615850e-47 |
| Msa0153430 | Msa0937940 | 0.822258 | 2.608176e-53 | -8.615850e-47 |
| Msa0153430 | Msa0950410 | 0.805327 | 1.408469e-49 | -8.615850e-47 |
| Msa0153430 | Msa0950620 | 0.811999 | 5.285524e-51 | -8.615850e-47 |
| Msa0153430 | Msa0951720 | 0.846223 | 2.484989e-59 | -8.615850e-47 |
| Msa0153430 | Msa0961420 | -0.805637 | 1.212815e-49 | -8.615850e-47 |
| Msa0153430 | Msa0961490 | 0.801013 | 1.100218e-48 | -8.615850e-47 |
| Msa0153430 | Msa0964680 | 0.815288 | 9.984054e-52 | -8.615850e-47 |
| Msa0153430 | Msa0970050 | 0.803177 | 3.948344e-49 | -8.615850e-47 |
| Msa0153430 | Msa0973130 | 0.803172 | 3.957689e-49 | -8.615850e-47 |
| Msa0153430 | Msa0973230 | 0.838461 | 2.836164e-57 | -8.615850e-47 |
| Msa0153430 | Msa0974910 | 0.802640 | 5.097846e-49 | -8.615850e-47 |
| Msa0153430 | Msa0980440 | 0.814267 | 1.680924e-51 | -8.615850e-47 |
| Msa0153430 | Msa0981740 | 0.806692 | 7.271659e-50 | -8.615850e-47 |
| Msa0153430 | Msa0988500 | 0.812697 | 3.721929e-51 | -8.615850e-47 |
| Msa0153430 | Msa1002300 | 0.805699 | 1.176656e-49 | -8.615850e-47 |
| Msa0153430 | Msa1004210 | 0.801133 | 1.039536e-48 | -8.615850e-47 |
| Msa0153430 | Msa1008340 | 0.807077 | 6.029392e-50 | -8.615850e-47 |
| Msa0153430 | Msa1014350 | 0.816670 | 4.907315e-52 | -8.615850e-47 |
| Msa0153430 | Msa1021770 | 0.817181 | 3.766614e-52 | -8.615850e-47 |
| Msa0153430 | Msa1026760 | 0.812463 | 4.187480e-51 | -8.615850e-47 |
| Msa0153430 | Msa1026790 | 0.810815 | 9.553659e-51 | -8.615850e-47 |
| Msa0153430 | Msa1029090 | 0.807896 | 4.040744e-50 | -8.615850e-47 |
| Msa0153430 | Msa1032350 | 0.822823 | 1.927936e-53 | -8.615850e-47 |
| Msa0153430 | Msa1036350 | 0.807580 | 4.715250e-50 | -8.615850e-47 |
| Msa0153430 | Msa1036390 | 0.826110 | 3.247315e-54 | -8.615850e-47 |
| Msa0153430 | Msa1037580 | 0.804512 | 2.085177e-49 | -8.615850e-47 |
| Msa0153430 | Msa1037710 | 0.805254 | 1.458749e-49 | -8.615850e-47 |
| Msa0153430 | Msa1044040 | 0.829285 | 5.607675e-55 | -8.615850e-47 |
| Msa0153430 | Msa1046610 | 0.820786 | 5.707165e-53 | -8.615850e-47 |
| Msa0153430 | Msa1049950 | 0.811611 | 6.420545e-51 | -8.615850e-47 |
| Msa0153430 | Msa1050480 | 0.836560 | 8.710574e-57 | -8.615850e-47 |
| Msa0153430 | Msa1050490 | 0.825194 | 5.354632e-54 | -8.615850e-47 |
| Msa0153430 | Msa1050500 | 0.805925 | 1.054679e-49 | -8.615850e-47 |
| Msa0153430 | Msa1055360 | 0.810841 | 9.431733e-51 | -8.615850e-47 |
| Msa0153430 | Msa1055430 | 0.831633 | 1.494574e-55 | -8.615850e-47 |
| Msa0153430 | Msa1072350 | 0.842961 | 1.877750e-58 | -8.615850e-47 |
| Msa0153430 | Msa1073500 | 0.819177 | 1.331623e-52 | -8.615850e-47 |
| Msa0153430 | Msa1076630 | 0.821021 | 5.036996e-53 | -8.615850e-47 |
| Msa0153430 | Msa1076680 | 0.825908 | 3.625730e-54 | -8.615850e-47 |
| Msa0153430 | Msa1080460 | 0.814086 | 1.842725e-51 | -8.615850e-47 |
| Msa0153430 | Msa1080470 | 0.811316 | 7.440802e-51 | -8.615850e-47 |
| Msa0153430 | Msa1107800 | 0.817840 | 2.675881e-52 | -8.615850e-47 |
| Msa0153430 | Msa1111760 | 0.800621 | 1.322793e-48 | -8.615850e-47 |
| Msa0153430 | Msa1118140 | 0.830388 | 3.021227e-55 | -8.615850e-47 |
| Msa0153430 | Msa1121660 | 0.800689 | 1.280821e-48 | -8.615850e-47 |
| Msa0153430 | Msa1122510 | 0.821875 | 3.199570e-53 | -8.615850e-47 |
| Msa0153430 | Msa1133660 | 0.817408 | 3.349152e-52 | -8.615850e-47 |
| Msa0153430 | Msa1135660 | 0.809796 | 1.585406e-50 | -8.615850e-47 |
| Msa0153430 | Msa1138450 | 0.845585 | 3.705969e-59 | -8.615850e-47 |
| Msa0153430 | Msa1138480 | 0.825886 | 3.669551e-54 | -8.615850e-47 |
| Msa0153430 | Msa1139240 | 0.803231 | 3.847491e-49 | -8.615850e-47 |
| Msa0153430 | Msa1140010 | 0.803731 | 3.030402e-49 | -8.615850e-47 |
| Msa0153430 | Msa1141250 | -0.803052 | 4.190721e-49 | -8.615850e-47 |
| Msa0153430 | Msa1142500 | 0.821362 | 4.202910e-53 | -8.615850e-47 |
| Msa0153430 | Msa1154160 | 0.816697 | 4.837698e-52 | -8.615850e-47 |
| Msa0153430 | Msa1156180 | 0.803295 | 3.731279e-49 | -8.615850e-47 |
| Msa0153430 | Msa1157020 | 0.806281 | 8.877707e-50 | -8.615850e-47 |
| Msa0153430 | Msa1159360 | 0.853216 | 2.767325e-61 | -8.615850e-47 |
| Msa0153430 | Msa1166970 | 0.806196 | 9.252793e-50 | -8.615850e-47 |
| Msa0153430 | Msa1167000 | 0.809809 | 1.574577e-50 | -8.615850e-47 |
| Msa0153430 | Msa1177620 | 0.804377 | 2.224090e-49 | -8.615850e-47 |
| Msa0153430 | Msa1182780 | 0.837069 | 6.461461e-57 | -8.615850e-47 |
| Msa0153430 | Msa1182830 | 0.861303 | 1.127566e-63 | -8.615850e-47 |
| Msa0153430 | Msa1184050 | 0.809762 | 1.612285e-50 | -8.615850e-47 |
| Msa0153430 | Msa1195750 | 0.813009 | 3.179782e-51 | -8.615850e-47 |
| Msa0153430 | Msa1198090 | 0.809980 | 1.447018e-50 | -8.615850e-47 |
| Msa0153430 | Msa1204980 | -0.814236 | 1.707183e-51 | -8.615850e-47 |
| Msa0153430 | Msa1205010 | -0.824871 | 6.380186e-54 | -8.615850e-47 |
| Msa0153430 | Msa1206020 | 0.837389 | 5.351210e-57 | -8.615850e-47 |
| Msa0153430 | Msa1207480 | -0.825841 | 3.761146e-54 | -8.615850e-47 |
| Msa0153430 | Msa1211390 | 0.817591 | 3.045982e-52 | -8.615850e-47 |
| Msa0153430 | Msa1221200 | -0.838168 | 3.376246e-57 | -8.615850e-47 |
| Msa0153430 | Msa1225820 | 0.812916 | 3.331495e-51 | -8.615850e-47 |
| Msa0153430 | Msa1226600 | 0.808967 | 2.387783e-50 | -8.615850e-47 |
| Msa0153430 | Msa1237260 | 0.810781 | 9.719074e-51 | -8.615850e-47 |
| Msa0153430 | Msa1238130 | 0.800990 | 1.111812e-48 | -8.615850e-47 |
| Msa0153430 | Msa1238370 | 0.809162 | 2.168252e-50 | -8.615850e-47 |
| Msa0153430 | Msa1243130 | 0.836206 | 1.071603e-56 | -8.615850e-47 |
| Msa0153430 | Msa1249940 | 0.814773 | 1.298572e-51 | -8.615850e-47 |
| Msa0153430 | Msa1256540 | -0.820026 | 8.526672e-53 | -8.615850e-47 |
| Msa0153430 | Msa1258280 | 0.837786 | 4.231617e-57 | -8.615850e-47 |
| Msa0153430 | Msa1261470 | 0.804151 | 2.478870e-49 | -8.615850e-47 |
| Msa0153430 | Msa1272130 | 0.807435 | 5.062620e-50 | -8.615850e-47 |
| Msa0153430 | Msa1272480 | 0.840060 | 1.091706e-57 | -8.615850e-47 |
| Msa0153430 | Msa1272950 | 0.808263 | 3.374820e-50 | -8.615850e-47 |
| Msa0153430 | Msa1272960 | 0.839741 | 1.321866e-57 | -8.615850e-47 |
| Msa0153430 | Msa1279850 | 0.819488 | 1.131154e-52 | -8.615850e-47 |
| Msa0153430 | Msa1279860 | 0.841756 | 3.916814e-58 | -8.615850e-47 |
| Msa0153430 | Msa1279870 | 0.820035 | 8.484389e-53 | -8.615850e-47 |
| Msa0153430 | Msa1280130 | 0.811558 | 6.594642e-51 | -8.615850e-47 |
| Msa0153430 | Msa1285830 | 0.816850 | 4.470365e-52 | -8.615850e-47 |
| Msa0153430 | Msa1287160 | 0.812434 | 4.248276e-51 | -8.615850e-47 |
| Msa0153430 | Msa1287340 | 0.812414 | 4.291679e-51 | -8.615850e-47 |
| Msa0153430 | Msa1292730 | 0.825741 | 3.972562e-54 | -8.615850e-47 |
| Msa0153430 | Msa1296960 | -0.818846 | 1.583646e-52 | -8.615850e-47 |
| Msa0153430 | Msa1297090 | 0.831164 | 1.949141e-55 | -8.615850e-47 |
| Msa0153430 | Msa1298290 | 0.840598 | 7.897935e-58 | -8.615850e-47 |
| Msa0153430 | Msa1304180 | 0.803130 | 4.037392e-49 | -8.615850e-47 |
| Msa0153430 | Msa1317710 | 0.832407 | 9.619935e-56 | -8.615850e-47 |
| Msa0153430 | Msa1328850 | 0.825976 | 3.494567e-54 | -8.615850e-47 |
| Msa0153430 | Msa1329990 | 0.801941 | 7.101016e-49 | -8.615850e-47 |
| Msa0153430 | Msa1336480 | 0.835801 | 1.357920e-56 | -8.615850e-47 |
| Msa0153430 | Msa1343340 | 0.817672 | 2.920544e-52 | -8.615850e-47 |
| Msa0153430 | Msa1355950 | 0.806926 | 6.486966e-50 | -8.615850e-47 |
| Msa0153430 | Msa1358870 | -0.832019 | 1.200452e-55 | -8.615850e-47 |
| Msa0153430 | Msa1361190 | 0.816837 | 4.500816e-52 | -8.615850e-47 |
| Msa0153430 | Msa1369530 | 0.810793 | 9.658458e-51 | -8.615850e-47 |
| Msa0153430 | Msa1373950 | 0.830129 | 3.494198e-55 | -8.615850e-47 |
| Msa0153430 | Msa1384320 | 0.833383 | 5.505045e-56 | -8.615850e-47 |
| Msa0153430 | Msa1386520 | 0.805191 | 1.504036e-49 | -8.615850e-47 |
| Msa0153430 | Msa1397540 | 0.808794 | 2.599492e-50 | -8.615850e-47 |
| Msa0153430 | Msa1397970 | 0.825995 | 3.457824e-54 | -8.615850e-47 |
| Msa0153430 | Msa1405400 | 0.809706 | 1.657620e-50 | -8.615850e-47 |
| Msa0153430 | Msa1405470 | 0.816976 | 4.189328e-52 | -8.615850e-47 |
| Msa0153430 | Msa1405650 | 0.808157 | 3.554569e-50 | -8.615850e-47 |
| Msa0153430 | Msa1426750 | 0.828983 | 6.636856e-55 | -8.615850e-47 |
| Msa0153430 | Msa1427830 | 0.838309 | 3.105091e-57 | -8.615850e-47 |
| Msa0153430 | Msa1439120 | 0.803219 | 3.869022e-49 | -8.615850e-47 |
| Msa0153430 | Msa1440220 | 0.801017 | 1.098113e-48 | -8.615850e-47 |
| Msa0153430 | Msa1440610 | 0.805518 | 1.284013e-49 | -8.615850e-47 |
| Msa0153430 | Msa1447440 | 0.839144 | 1.888666e-57 | -8.615850e-47 |
| Msa0153430 | Msa1450020 | 0.832957 | 7.028447e-56 | -8.615850e-47 |
| Msa0153430 | Msa1454110 | 0.823931 | 1.061767e-53 | -8.615850e-47 |
| Msa0153430 | Msa1456810 | 0.804667 | 1.935344e-49 | -8.615850e-47 |
| Msa0153430 | Msa1460310 | -0.833042 | 6.693638e-56 | -8.615850e-47 |
| Msa0153430 | Msa1461250 | -0.826834 | 2.182262e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153430 | MtrunA17_Chr1g0148511 | 51.765 | 170 | 47 | 7 | 1 | 138 | 198 | 364 | 1.08e-39 | 141 |
| Msa0153430 | MtrunA17_Chr1g0148491 | 48.810 | 168 | 53 | 7 | 1 | 138 | 122 | 286 | 2.52e-38 | 137 |
| Msa0153430 | MtrunA17_Chr1g0158201 | 36.875 | 160 | 76 | 4 | 1 | 138 | 205 | 361 | 8.22e-25 | 99.0 |
| Msa0153430 | MtrunA17_Chr1g0148461 | 36.527 | 167 | 72 | 5 | 1 | 136 | 232 | 395 | 4.51e-24 | 97.1 |
| Msa0153430 | MtrunA17_Chr1g0158261 | 36.875 | 160 | 71 | 5 | 1 | 138 | 206 | 357 | 4.02e-22 | 91.3 |
| Msa0153430 | MtrunA17_Chr1g0148501 | 35.583 | 163 | 73 | 5 | 1 | 134 | 219 | 378 | 6.24e-22 | 90.9 |
| Msa0153430 | MtrunA17_Chr1g0158251 | 37.107 | 159 | 75 | 4 | 2 | 138 | 211 | 366 | 3.55e-21 | 88.6 |
| Msa0153430 | MtrunA17_Chr1g0158161 | 53.846 | 65 | 27 | 2 | 1 | 65 | 195 | 256 | 1.14e-14 | 69.3 |
| Msa0153430 | MtrunA17_Chr1g0158221 | 36.842 | 114 | 46 | 3 | 1 | 114 | 205 | 292 | 4.56e-14 | 67.8 |
| Msa0153430 | MtrunA17_Chr2g0279661 | 34.884 | 129 | 57 | 6 | 1 | 106 | 216 | 340 | 6.57e-13 | 65.1 |
| Msa0153430 | MtrunA17_Chr3g0125431 | 34.884 | 129 | 57 | 6 | 1 | 106 | 211 | 335 | 1.43e-12 | 63.9 |
| Msa0153430 | MtrunA17_Chr1g0158171 | 43.243 | 74 | 41 | 1 | 66 | 138 | 15 | 88 | 2.26e-12 | 63.2 |
| Msa0153430 | MtrunA17_Chr3g0125481 | 33.582 | 134 | 59 | 7 | 1 | 109 | 208 | 336 | 1.42e-11 | 60.8 |
| Msa0153430 | MtrunA17_Chr3g0125461 | 32.061 | 131 | 60 | 6 | 1 | 106 | 231 | 357 | 9.12e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 30 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTTAAACAAAATAAAT+AGG | 0.183362 | 1_4:-16816700 | None:intergenic |
| GATGACGAGGACGCAGATTT+TGG | 0.268207 | 1_4:+16815874 | Msa0153430:CDS |
| ATGGTGTTACCTACTGTTCT+TGG | 0.329425 | 1_4:+16816660 | Msa0153430:CDS |
| TCCTTTCTCTGTTCCATCTC+CGG | 0.361751 | 1_4:-16816622 | None:intergenic |
| AACTGCAGTACAGCTTCTAA+TGG | 0.419495 | 1_4:+16815817 | Msa0153430:CDS |
| GAATTTAAACAAAATAAATA+GGG | 0.421896 | 1_4:-16816699 | None:intergenic |
| TATTCATTTGTTGTTAAGAA+TGG | 0.427976 | 1_4:+16815700 | Msa0153430:CDS |
| GTGGTTCTTGACTGGACCAT+TGG | 0.434091 | 1_4:+16815781 | Msa0153430:CDS |
| GCAAAATGTAAGAACAATGA+TGG | 0.437078 | 1_4:+16816567 | Msa0153430:CDS |
| AATTACCTGTGGTTCTTGAC+TGG | 0.452246 | 1_4:+16815773 | Msa0153430:CDS |
| GTGTGTCCAAAGTGGTATTC+CGG | 0.490962 | 1_4:+16816603 | Msa0153430:CDS |
| TCCGGAGATGGAACAGAGAA+AGG | 0.500249 | 1_4:+16816621 | Msa0153430:CDS |
| ACCACAGGTAATTCCTTGAA+TGG | 0.504681 | 1_4:-16815763 | None:intergenic |
| CATGCATATAAGAAATGTAA+AGG | 0.508510 | 1_4:-16816734 | None:intergenic |
| CCAAAGTGGTATTCCGGAGA+TGG | 0.516993 | 1_4:+16816609 | Msa0153430:CDS |
| CTTCTAATGGAGTCAACAAT+GGG | 0.532919 | 1_4:+16815830 | Msa0153430:CDS |
| GTTCTTGACTGGACCATTGG+TGG | 0.533869 | 1_4:+16815784 | Msa0153430:CDS |
| AGGAGGGTGCACAAATTCAA+TGG | 0.546015 | 1_4:+16816641 | Msa0153430:CDS |
| CCATCTCCGGAATACCACTT+TGG | 0.552144 | 1_4:-16816609 | None:intergenic |
| TAAACAAAATAAATAGGGCA+TGG | 0.552521 | 1_4:-16816694 | None:intergenic |
| GCTTCTAATGGAGTCAACAA+TGG | 0.564078 | 1_4:+16815829 | Msa0153430:CDS |
| CAAAATGTAAGAACAATGAT+GGG | 0.572341 | 1_4:+16816568 | Msa0153430:CDS |
| ACCATTCAAGGAATTACCTG+TGG | 0.604988 | 1_4:+16815762 | Msa0153430:CDS |
| ATGGTCCAGTCAAGAACCAC+AGG | 0.611205 | 1_4:-16815778 | None:intergenic |
| AGATGCTTACCAAGAACAGT+AGG | 0.623884 | 1_4:-16816669 | None:intergenic |
| GAGATGGAACAGAGAAAGGA+GGG | 0.625034 | 1_4:+16816625 | Msa0153430:CDS |
| GAATGTGAAAGAAACTTGCA+TGG | 0.631248 | 1_4:+16816531 | Msa0153430:CDS |
| GGAGATGGAACAGAGAAAGG+AGG | 0.637697 | 1_4:+16816624 | Msa0153430:CDS |
| ACAAATGTGTGTGTCCAAAG+TGG | 0.653868 | 1_4:+16816595 | Msa0153430:CDS |
| GAATAGCTATTGTGATGACG+AGG | 0.683872 | 1_4:+16815861 | Msa0153430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTTCTTAAAACT+TGG | + | chr1_4:16815993-16816012 | Msa0153430:intron | 10.0% |
| !! | AATATAATTGTTTGAAAATA+TGG | + | chr1_4:16816477-16816496 | Msa0153430:intron | 10.0% |
| !! | GAATTTAAACAAAATAAATA+GGG | - | chr1_4:16816702-16816721 | None:intergenic | 10.0% |
| !! | TGAATTTAAACAAAATAAAT+AGG | - | chr1_4:16816703-16816722 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTCTTAAAACT+TGG | + | chr1_4:16815993-16816012 | Msa0153430:intron | 10.0% |
| !! | AATATAATTGTTTGAAAATA+TGG | + | chr1_4:16816477-16816496 | Msa0153430:intron | 10.0% |
| !! | GAATTTAAACAAAATAAATA+GGG | - | chr1_4:16816702-16816721 | None:intergenic | 10.0% |
| !! | TGAATTTAAACAAAATAAAT+AGG | - | chr1_4:16816703-16816722 | None:intergenic | 10.0% |
| !!! | CATACAAATAGTTTTAAATA+GGG | - | chr1_4:16816076-16816095 | None:intergenic | 15.0% |
| !!! | ATGTTTGACTTTTTTTTTAA+AGG | - | chr1_4:16816139-16816158 | None:intergenic | 15.0% |
| !! | TATATTATTTATTACTGCAA+AGG | + | chr1_4:16816295-16816314 | Msa0153430:intron | 15.0% |
| !! | ATATTATTTATTACTGCAAA+GGG | + | chr1_4:16816296-16816315 | Msa0153430:intron | 15.0% |
| !!! | AAATATGGTTACTTATTTTA+TGG | + | chr1_4:16816492-16816511 | Msa0153430:intron | 15.0% |
| !!! | AATATGGTTACTTATTTTAT+GGG | + | chr1_4:16816493-16816512 | Msa0153430:intron | 15.0% |
| !!! | CATACAAATAGTTTTAAATA+GGG | - | chr1_4:16816076-16816095 | None:intergenic | 15.0% |
| !!! | ATGTTTGACTTTTTTTTTAA+AGG | - | chr1_4:16816139-16816158 | None:intergenic | 15.0% |
| !! | TATATTATTTATTACTGCAA+AGG | + | chr1_4:16816295-16816314 | Msa0153430:intron | 15.0% |
| !! | ATATTATTTATTACTGCAAA+GGG | + | chr1_4:16816296-16816315 | Msa0153430:intron | 15.0% |
| !!! | AAATATGGTTACTTATTTTA+TGG | + | chr1_4:16816492-16816511 | Msa0153430:intron | 15.0% |
| !!! | AATATGGTTACTTATTTTAT+GGG | + | chr1_4:16816493-16816512 | Msa0153430:intron | 15.0% |
| !!! | TATTCATTTGTTGTTAAGAA+TGG | + | chr1_4:16815700-16815719 | Msa0153430:CDS | 20.0% |
| !!! | CCATACAAATAGTTTTAAAT+AGG | - | chr1_4:16816077-16816096 | None:intergenic | 20.0% |
| !!! | CCTATTTAAAACTATTTGTA+TGG | + | chr1_4:16816074-16816093 | Msa0153430:intron | 20.0% |
| !! | ATGGTACAATATATTGTTTA+AGG | + | chr1_4:16816180-16816199 | Msa0153430:intron | 20.0% |
| !!! | TATTCATTTGTTGTTAAGAA+TGG | + | chr1_4:16815700-16815719 | Msa0153430:CDS | 20.0% |
| !!! | CCATACAAATAGTTTTAAAT+AGG | - | chr1_4:16816077-16816096 | None:intergenic | 20.0% |
| !!! | CCTATTTAAAACTATTTGTA+TGG | + | chr1_4:16816074-16816093 | Msa0153430:intron | 20.0% |
| !! | ATGGTACAATATATTGTTTA+AGG | + | chr1_4:16816180-16816199 | Msa0153430:intron | 20.0% |
| ! | TCTTCAGCTCATTTAAAAAA+AGG | + | chr1_4:16815736-16815755 | Msa0153430:CDS | 25.0% |
| ! | AAAAAAAGGTTTACCATTCA+AGG | + | chr1_4:16815750-16815769 | Msa0153430:CDS | 25.0% |
| !! | TATGGATTAACCTACAAAAT+TGG | + | chr1_4:16816092-16816111 | Msa0153430:intron | 25.0% |
| !!! | GACTTTTTTTTTAAAGGCTT+AGG | - | chr1_4:16816133-16816152 | None:intergenic | 25.0% |
| ! | AAACATCAAACCAATCAAAA+TGG | + | chr1_4:16816153-16816172 | Msa0153430:intron | 25.0% |
| ! | AACATCAAACCAATCAAAAT+GGG | + | chr1_4:16816154-16816173 | Msa0153430:intron | 25.0% |
| ! | ATCCTTGAACTATTGAATAT+TGG | - | chr1_4:16816241-16816260 | None:intergenic | 25.0% |
| ! | AATATTCAATAGTTCAAGGA+TGG | + | chr1_4:16816240-16816259 | Msa0153430:intron | 25.0% |
| ! | CAAAATGTAAGAACAATGAT+GGG | + | chr1_4:16816568-16816587 | Msa0153430:CDS | 25.0% |
| ! | TAAACAAAATAAATAGGGCA+TGG | - | chr1_4:16816697-16816716 | None:intergenic | 25.0% |
| ! | CATGCATATAAGAAATGTAA+AGG | - | chr1_4:16816737-16816756 | None:intergenic | 25.0% |
| ! | TCTTCAGCTCATTTAAAAAA+AGG | + | chr1_4:16815736-16815755 | Msa0153430:CDS | 25.0% |
| ! | AAAAAAAGGTTTACCATTCA+AGG | + | chr1_4:16815750-16815769 | Msa0153430:CDS | 25.0% |
| !! | TATGGATTAACCTACAAAAT+TGG | + | chr1_4:16816092-16816111 | Msa0153430:intron | 25.0% |
| !!! | GACTTTTTTTTTAAAGGCTT+AGG | - | chr1_4:16816133-16816152 | None:intergenic | 25.0% |
| ! | AAACATCAAACCAATCAAAA+TGG | + | chr1_4:16816153-16816172 | Msa0153430:intron | 25.0% |
| ! | AACATCAAACCAATCAAAAT+GGG | + | chr1_4:16816154-16816173 | Msa0153430:intron | 25.0% |
| ! | ATCCTTGAACTATTGAATAT+TGG | - | chr1_4:16816241-16816260 | None:intergenic | 25.0% |
| ! | AATATTCAATAGTTCAAGGA+TGG | + | chr1_4:16816240-16816259 | Msa0153430:intron | 25.0% |
| ! | CAAAATGTAAGAACAATGAT+GGG | + | chr1_4:16816568-16816587 | Msa0153430:CDS | 25.0% |
| ! | TAAACAAAATAAATAGGGCA+TGG | - | chr1_4:16816697-16816716 | None:intergenic | 25.0% |
| ! | CATGCATATAAGAAATGTAA+AGG | - | chr1_4:16816737-16816756 | None:intergenic | 25.0% |
| ! | GGTCAATTTTCTTACTTGAA+TGG | + | chr1_4:16815958-16815977 | Msa0153430:intron | 30.0% |
| TTAATTACGTACTAATCCGA+AGG | + | chr1_4:16816023-16816042 | Msa0153430:intron | 30.0% | |
| ! | AACCAATCAAAATGGGTTTA+TGG | + | chr1_4:16816161-16816180 | Msa0153430:intron | 30.0% |
| !! | TACCATAAACCCATTTTGAT+TGG | - | chr1_4:16816166-16816185 | None:intergenic | 30.0% |
| CTCCAATATTCAATAGTTCA+AGG | + | chr1_4:16816236-16816255 | Msa0153430:intron | 30.0% | |
| GCAAAATGTAAGAACAATGA+TGG | + | chr1_4:16816567-16816586 | Msa0153430:CDS | 30.0% | |
| ! | GGTCAATTTTCTTACTTGAA+TGG | + | chr1_4:16815958-16815977 | Msa0153430:intron | 30.0% |
| TTAATTACGTACTAATCCGA+AGG | + | chr1_4:16816023-16816042 | Msa0153430:intron | 30.0% | |
| ! | AACCAATCAAAATGGGTTTA+TGG | + | chr1_4:16816161-16816180 | Msa0153430:intron | 30.0% |
| !! | TACCATAAACCCATTTTGAT+TGG | - | chr1_4:16816166-16816185 | None:intergenic | 30.0% |
| CTCCAATATTCAATAGTTCA+AGG | + | chr1_4:16816236-16816255 | Msa0153430:intron | 30.0% | |
| GCAAAATGTAAGAACAATGA+TGG | + | chr1_4:16816567-16816586 | Msa0153430:CDS | 30.0% | |
| CTTCTAATGGAGTCAACAAT+GGG | + | chr1_4:16815830-16815849 | Msa0153430:CDS | 35.0% | |
| TAAGGATTTCCTTCAAAACC+TGG | - | chr1_4:16815919-16815938 | None:intergenic | 35.0% | |
| GAATGTGAAAGAAACTTGCA+TGG | + | chr1_4:16816531-16816550 | Msa0153430:CDS | 35.0% | |
| CTTCTAATGGAGTCAACAAT+GGG | + | chr1_4:16815830-16815849 | Msa0153430:CDS | 35.0% | |
| TAAGGATTTCCTTCAAAACC+TGG | - | chr1_4:16815919-16815938 | None:intergenic | 35.0% | |
| GAATGTGAAAGAAACTTGCA+TGG | + | chr1_4:16816531-16816550 | Msa0153430:CDS | 35.0% | |
| ACCATTCAAGGAATTACCTG+TGG | + | chr1_4:16815762-16815781 | Msa0153430:CDS | 40.0% | |
| ACCACAGGTAATTCCTTGAA+TGG | - | chr1_4:16815766-16815785 | None:intergenic | 40.0% | |
| AATTACCTGTGGTTCTTGAC+TGG | + | chr1_4:16815773-16815792 | Msa0153430:CDS | 40.0% | |
| ! | GTTTTCATCAAAGCCACCAA+TGG | - | chr1_4:16815800-16815819 | None:intergenic | 40.0% |
| AACTGCAGTACAGCTTCTAA+TGG | + | chr1_4:16815817-16815836 | Msa0153430:CDS | 40.0% | |
| GCTTCTAATGGAGTCAACAA+TGG | + | chr1_4:16815829-16815848 | Msa0153430:CDS | 40.0% | |
| ! | GAATAGCTATTGTGATGACG+AGG | + | chr1_4:16815861-16815880 | Msa0153430:CDS | 40.0% |
| CTTCAAAACCTGGATTGCAA+TGG | - | chr1_4:16815909-16815928 | None:intergenic | 40.0% | |
| !! | CATTGCAATCCAGGTTTTGA+AGG | + | chr1_4:16815907-16815926 | Msa0153430:intron | 40.0% |
| GGAAATCCTTATCATCCCAA+CGG | + | chr1_4:16815928-16815947 | Msa0153430:intron | 40.0% | |
| TAAATAGGGCCATCGCAAAT+GGG | - | chr1_4:16816062-16816081 | None:intergenic | 40.0% | |
| TTAAATAGGGCCATCGCAAA+TGG | - | chr1_4:16816063-16816082 | None:intergenic | 40.0% | |
| AACCTACAAAATTGGCATCG+AGG | + | chr1_4:16816100-16816119 | Msa0153430:intron | 40.0% | |
| ! | ACCTACAAAATTGGCATCGA+GGG | + | chr1_4:16816101-16816120 | Msa0153430:intron | 40.0% |
| ACAAATGTGTGTGTCCAAAG+TGG | + | chr1_4:16816595-16816614 | Msa0153430:CDS | 40.0% | |
| !! | ATGGTGTTACCTACTGTTCT+TGG | + | chr1_4:16816660-16816679 | Msa0153430:CDS | 40.0% |
| AGATGCTTACCAAGAACAGT+AGG | - | chr1_4:16816672-16816691 | None:intergenic | 40.0% | |
| ACCATTCAAGGAATTACCTG+TGG | + | chr1_4:16815762-16815781 | Msa0153430:CDS | 40.0% | |
| ACCACAGGTAATTCCTTGAA+TGG | - | chr1_4:16815766-16815785 | None:intergenic | 40.0% | |
| AATTACCTGTGGTTCTTGAC+TGG | + | chr1_4:16815773-16815792 | Msa0153430:CDS | 40.0% | |
| ! | GTTTTCATCAAAGCCACCAA+TGG | - | chr1_4:16815800-16815819 | None:intergenic | 40.0% |
| AACTGCAGTACAGCTTCTAA+TGG | + | chr1_4:16815817-16815836 | Msa0153430:CDS | 40.0% | |
| GCTTCTAATGGAGTCAACAA+TGG | + | chr1_4:16815829-16815848 | Msa0153430:CDS | 40.0% | |
| ! | GAATAGCTATTGTGATGACG+AGG | + | chr1_4:16815861-16815880 | Msa0153430:CDS | 40.0% |
| CTTCAAAACCTGGATTGCAA+TGG | - | chr1_4:16815909-16815928 | None:intergenic | 40.0% | |
| !! | CATTGCAATCCAGGTTTTGA+AGG | + | chr1_4:16815907-16815926 | Msa0153430:intron | 40.0% |
| GGAAATCCTTATCATCCCAA+CGG | + | chr1_4:16815928-16815947 | Msa0153430:intron | 40.0% | |
| TAAATAGGGCCATCGCAAAT+GGG | - | chr1_4:16816062-16816081 | None:intergenic | 40.0% | |
| TTAAATAGGGCCATCGCAAA+TGG | - | chr1_4:16816063-16816082 | None:intergenic | 40.0% | |
| AACCTACAAAATTGGCATCG+AGG | + | chr1_4:16816100-16816119 | Msa0153430:intron | 40.0% | |
| ! | ACCTACAAAATTGGCATCGA+GGG | + | chr1_4:16816101-16816120 | Msa0153430:intron | 40.0% |
| ACAAATGTGTGTGTCCAAAG+TGG | + | chr1_4:16816595-16816614 | Msa0153430:CDS | 40.0% | |
| !! | ATGGTGTTACCTACTGTTCT+TGG | + | chr1_4:16816660-16816679 | Msa0153430:CDS | 40.0% |
| AGATGCTTACCAAGAACAGT+AGG | - | chr1_4:16816672-16816691 | None:intergenic | 40.0% | |
| TACCAATGCCATTGCAATCC+AGG | + | chr1_4:16815898-16815917 | Msa0153430:intron | 45.0% | |
| AACCTGGATTGCAATGGCAT+TGG | - | chr1_4:16815903-16815922 | None:intergenic | 45.0% | |
| TCGCAAATGGGCAGTGAAAT+TGG | - | chr1_4:16816050-16816069 | None:intergenic | 45.0% | |
| ATTTCACTGCCCATTTGCGA+TGG | + | chr1_4:16816050-16816069 | Msa0153430:intron | 45.0% | |
| ! | TCCCTCGATGCCAATTTTGT+AGG | - | chr1_4:16816105-16816124 | None:intergenic | 45.0% |
| ATATTGGAGCGACCTGATCA+AGG | - | chr1_4:16816225-16816244 | None:intergenic | 45.0% | |
| GTGTGTCCAAAGTGGTATTC+CGG | + | chr1_4:16816603-16816622 | Msa0153430:CDS | 45.0% | |
| TCCTTTCTCTGTTCCATCTC+CGG | - | chr1_4:16816625-16816644 | None:intergenic | 45.0% | |
| GAGATGGAACAGAGAAAGGA+GGG | + | chr1_4:16816625-16816644 | Msa0153430:CDS | 45.0% | |
| ! | AGGAGGGTGCACAAATTCAA+TGG | + | chr1_4:16816641-16816660 | Msa0153430:CDS | 45.0% |
| TACCAATGCCATTGCAATCC+AGG | + | chr1_4:16815898-16815917 | Msa0153430:intron | 45.0% | |
| AACCTGGATTGCAATGGCAT+TGG | - | chr1_4:16815903-16815922 | None:intergenic | 45.0% | |
| TCGCAAATGGGCAGTGAAAT+TGG | - | chr1_4:16816050-16816069 | None:intergenic | 45.0% | |
| ATTTCACTGCCCATTTGCGA+TGG | + | chr1_4:16816050-16816069 | Msa0153430:intron | 45.0% | |
| ! | TCCCTCGATGCCAATTTTGT+AGG | - | chr1_4:16816105-16816124 | None:intergenic | 45.0% |
| ATATTGGAGCGACCTGATCA+AGG | - | chr1_4:16816225-16816244 | None:intergenic | 45.0% | |
| GTGTGTCCAAAGTGGTATTC+CGG | + | chr1_4:16816603-16816622 | Msa0153430:CDS | 45.0% | |
| TCCTTTCTCTGTTCCATCTC+CGG | - | chr1_4:16816625-16816644 | None:intergenic | 45.0% | |
| GAGATGGAACAGAGAAAGGA+GGG | + | chr1_4:16816625-16816644 | Msa0153430:CDS | 45.0% | |
| ! | AGGAGGGTGCACAAATTCAA+TGG | + | chr1_4:16816641-16816660 | Msa0153430:CDS | 45.0% |
| ATGGTCCAGTCAAGAACCAC+AGG | - | chr1_4:16815781-16815800 | None:intergenic | 50.0% | |
| GTGGTTCTTGACTGGACCAT+TGG | + | chr1_4:16815781-16815800 | Msa0153430:CDS | 50.0% | |
| GTTCTTGACTGGACCATTGG+TGG | + | chr1_4:16815784-16815803 | Msa0153430:CDS | 50.0% | |
| ! | GATGACGAGGACGCAGATTT+TGG | + | chr1_4:16815874-16815893 | Msa0153430:CDS | 50.0% |
| AATTGACCTGTGCAGCCGTT+GGG | - | chr1_4:16815946-16815965 | None:intergenic | 50.0% | |
| AAATTGACCTGTGCAGCCGT+TGG | - | chr1_4:16815947-16815966 | None:intergenic | 50.0% | |
| GGGCAGTGAAATTGGACCTT+CGG | - | chr1_4:16816042-16816061 | None:intergenic | 50.0% | |
| AATCAGACCCGTCCTTGATC+AGG | + | chr1_4:16816210-16816229 | Msa0153430:intron | 50.0% | |
| CCATCTCCGGAATACCACTT+TGG | - | chr1_4:16816612-16816631 | None:intergenic | 50.0% | |
| CCAAAGTGGTATTCCGGAGA+TGG | + | chr1_4:16816609-16816628 | Msa0153430:CDS | 50.0% | |
| TCCGGAGATGGAACAGAGAA+AGG | + | chr1_4:16816621-16816640 | Msa0153430:CDS | 50.0% | |
| GGAGATGGAACAGAGAAAGG+AGG | + | chr1_4:16816624-16816643 | Msa0153430:CDS | 50.0% | |
| ATGGTCCAGTCAAGAACCAC+AGG | - | chr1_4:16815781-16815800 | None:intergenic | 50.0% | |
| GTGGTTCTTGACTGGACCAT+TGG | + | chr1_4:16815781-16815800 | Msa0153430:CDS | 50.0% | |
| GTTCTTGACTGGACCATTGG+TGG | + | chr1_4:16815784-16815803 | Msa0153430:CDS | 50.0% | |
| ! | GATGACGAGGACGCAGATTT+TGG | + | chr1_4:16815874-16815893 | Msa0153430:CDS | 50.0% |
| AATTGACCTGTGCAGCCGTT+GGG | - | chr1_4:16815946-16815965 | None:intergenic | 50.0% | |
| AAATTGACCTGTGCAGCCGT+TGG | - | chr1_4:16815947-16815966 | None:intergenic | 50.0% | |
| GGGCAGTGAAATTGGACCTT+CGG | - | chr1_4:16816042-16816061 | None:intergenic | 50.0% | |
| AATCAGACCCGTCCTTGATC+AGG | + | chr1_4:16816210-16816229 | Msa0153430:intron | 50.0% | |
| CCATCTCCGGAATACCACTT+TGG | - | chr1_4:16816612-16816631 | None:intergenic | 50.0% | |
| CCAAAGTGGTATTCCGGAGA+TGG | + | chr1_4:16816609-16816628 | Msa0153430:CDS | 50.0% | |
| TCCGGAGATGGAACAGAGAA+AGG | + | chr1_4:16816621-16816640 | Msa0153430:CDS | 50.0% | |
| GGAGATGGAACAGAGAAAGG+AGG | + | chr1_4:16816624-16816643 | Msa0153430:CDS | 50.0% | |
| GTGCAGCCGTTGGGATGATA+AGG | - | chr1_4:16815937-16815956 | None:intergenic | 55.0% | |
| TATCATCCCAACGGCTGCAC+AGG | + | chr1_4:16815937-16815956 | Msa0153430:intron | 55.0% | |
| TGGAGCGACCTGATCAAGGA+CGG | - | chr1_4:16816221-16816240 | None:intergenic | 55.0% | |
| GTGCAGCCGTTGGGATGATA+AGG | - | chr1_4:16815937-16815956 | None:intergenic | 55.0% | |
| TATCATCCCAACGGCTGCAC+AGG | + | chr1_4:16815937-16815956 | Msa0153430:intron | 55.0% | |
| TGGAGCGACCTGATCAAGGA+CGG | - | chr1_4:16816221-16816240 | None:intergenic | 55.0% | |
| GGAGCGACCTGATCAAGGAC+GGG | - | chr1_4:16816220-16816239 | None:intergenic | 60.0% | |
| GGAGCGACCTGATCAAGGAC+GGG | - | chr1_4:16816220-16816239 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 16815700 | 16816776 | 16815700 | ID=Msa0153430;Name=Msa0153430 |
| chr1_4 | mRNA | 16815700 | 16816776 | 16815700 | ID=Msa0153430-mRNA-1;Parent=Msa0153430;Name=Msa0153430-mRNA-1;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|0|0.5|2|0|149 |
| chr1_4 | exon | 16815700 | 16815895 | 16815700 | ID=Msa0153430-mRNA-1:exon:6447;Parent=Msa0153430-mRNA-1 |
| chr1_4 | exon | 16816523 | 16816776 | 16816523 | ID=Msa0153430-mRNA-1:exon:6448;Parent=Msa0153430-mRNA-1 |
| chr1_4 | CDS | 16815700 | 16815895 | 16815700 | ID=Msa0153430-mRNA-1:cds;Parent=Msa0153430-mRNA-1 |
| chr1_4 | CDS | 16816523 | 16816776 | 16816523 | ID=Msa0153430-mRNA-1:cds;Parent=Msa0153430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
