AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0233040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233040 MtrunA17_Chr2g0280361 91.288 264 20 2 484 747 12 272 4.25e-171 492
Msa0233040 MtrunA17_Chr2g0280361 76.518 247 53 2 1 247 8 249 1.81e-131 390
Msa0233040 MtrunA17_Chr2g0280361 75.210 238 56 3 255 490 14 250 8.47e-119 358
Msa0233040 MtrunA17_Chr2g0280391 92.339 248 19 0 1 248 8 255 3.42e-167 482
Msa0233040 MtrunA17_Chr2g0280391 72.325 271 65 4 484 746 12 280 5.17e-133 395
Msa0233040 MtrunA17_Chr2g0280391 72.199 241 61 3 255 489 14 254 1.65e-114 347
Msa0233040 MtrunA17_Chr2g0280381 92.766 235 17 0 255 489 14 248 1.95e-154 449
Msa0233040 MtrunA17_Chr2g0280381 71.212 264 71 4 484 746 12 271 1.54e-123 370
Msa0233040 MtrunA17_Chr2g0280381 70.161 248 68 3 1 248 8 249 1.14e-114 347
Msa0233040 MtrunA17_Chr6g0474901 28.319 452 285 13 293 715 44 485 5.69e-45 173
Msa0233040 MtrunA17_Chr6g0474901 27.326 516 302 16 5 483 6 485 8.82e-45 173
Msa0233040 MtrunA17_Chr6g0474901 29.596 223 141 4 508 716 26 246 1.53e-23 106
Msa0233040 MtrunA17_Chr6g0475091 28.337 487 287 14 31 483 43 501 1.77e-43 169
Msa0233040 MtrunA17_Chr6g0475091 27.254 477 289 15 279 715 43 501 8.37e-40 157
Msa0233040 MtrunA17_Chr6g0474871 27.004 474 296 13 36 481 36 487 1.89e-42 166
Msa0233040 MtrunA17_Chr6g0474871 26.742 445 296 13 293 713 49 487 1.27e-39 157
Msa0233040 MtrunA17_Chr6g0474871 31.220 205 132 4 523 718 49 253 4.48e-23 105
Msa0233040 MtrunA17_Chr6g0475001 26.367 512 314 17 5 481 6 489 1.17e-39 156
Msa0233040 MtrunA17_Chr6g0475001 24.696 494 316 16 293 747 49 525 1.58e-35 143
Msa0233040 MtrunA17_Chr6g0475001 30.942 223 140 5 508 716 31 253 3.50e-21 98.6
Msa0233040 MtrunA17_Chr6g0475201 25.191 524 330 17 267 747 23 527 2.70e-38 153
Msa0233040 MtrunA17_Chr6g0475201 27.068 532 314 17 4 495 8 505 1.68e-35 144
Msa0233040 MtrunA17_Chr6g0475121 26.376 527 315 17 4 489 6 500 8.05e-37 146
Msa0233040 MtrunA17_Chr6g0475121 27.107 439 275 14 309 715 67 492 9.25e-37 145
Msa0233040 MtrunA17_Chr6g0475121 27.895 190 128 3 539 719 67 256 3.74e-15 79.3
Msa0233040 MtrunA17_Chr6g0474811 27.022 507 304 16 16 483 15 494 8.41e-36 145
Msa0233040 MtrunA17_Chr6g0474811 25.882 510 314 16 277 746 34 519 8.10e-35 142
Msa0233040 MtrunA17_Chr6g0475111 25.966 466 292 14 56 489 65 509 2.26e-33 137
Msa0233040 MtrunA17_Chr6g0475111 24.628 471 311 13 309 745 73 533 1.28e-30 129
Msa0233040 MtrunA17_Chr6g0475111 29.864 221 124 7 42 245 301 507 1.49e-17 87.4
Msa0233040 MtrunA17_Chr3g0081031 35.096 208 121 3 43 241 58 260 1.23e-31 131
Msa0233040 MtrunA17_Chr3g0081031 31.963 219 131 4 510 715 47 260 1.89e-28 121
Msa0233040 MtrunA17_Chr3g0081031 31.156 199 115 4 308 492 79 269 7.44e-25 110
Msa0233040 MtrunA17_Chr3g0081051 33.488 215 133 3 42 252 39 247 1.35e-31 124
Msa0233040 MtrunA17_Chr3g0081051 32.995 197 118 3 525 712 48 239 4.07e-28 114
Msa0233040 MtrunA17_Chr3g0081051 29.060 234 141 5 264 480 14 239 2.06e-24 103
Msa0233040 MtrunA17_Chr8g0347571 26.819 481 295 14 34 484 37 490 5.74e-31 130
Msa0233040 MtrunA17_Chr8g0347571 25.217 460 269 15 302 716 61 490 6.96e-26 114
Msa0233040 MtrunA17_Chr8g0347571 25.888 197 134 5 532 722 61 251 1.86e-12 71.2
Msa0233040 MtrunA17_Chr1g0206251 25.709 494 296 15 34 483 45 511 6.82e-31 127
Msa0233040 MtrunA17_Chr1g0206251 24.187 492 292 18 300 736 67 532 9.32e-30 124
Msa0233040 MtrunA17_Chr3g0081001 31.841 201 134 3 43 240 46 246 8.00e-29 122
Msa0233040 MtrunA17_Chr3g0081001 28.019 207 142 4 512 713 41 245 2.31e-25 112
Msa0233040 MtrunA17_Chr3g0081001 28.571 217 144 6 285 493 44 257 7.76e-23 103
Msa0233040 MtrunA17_Chr8g0354271 31.944 216 128 5 38 242 44 251 8.86e-29 122
Msa0233040 MtrunA17_Chr8g0354271 29.075 227 138 6 510 721 38 256 1.89e-26 115
Msa0233040 MtrunA17_Chr8g0354271 29.577 213 134 7 292 493 54 261 7.79e-24 107
Msa0233040 MtrunA17_Chr2g0323011 32.367 207 134 4 37 238 38 243 1.64e-28 114
Msa0233040 MtrunA17_Chr2g0323011 31.863 204 131 5 515 712 42 243 6.44e-26 107
Msa0233040 MtrunA17_Chr2g0323011 30.660 212 136 6 279 480 33 243 1.20e-23 100
Msa0233040 MtrunA17_Chr5g0428591 29.114 237 162 2 8 239 9 244 3.79e-28 114
Msa0233040 MtrunA17_Chr5g0428591 30.288 208 139 3 511 713 38 244 1.49e-23 101
Msa0233040 MtrunA17_Chr5g0428591 29.218 243 152 9 254 481 7 244 4.91e-20 90.9
Msa0233040 MtrunA17_Chr3g0081011 32.000 200 132 4 43 239 46 244 5.66e-27 117
Msa0233040 MtrunA17_Chr3g0081011 30.348 201 124 5 522 713 51 244 1.94e-25 112
Msa0233040 MtrunA17_Chr3g0081011 30.000 210 135 7 292 493 51 256 2.93e-22 102
Msa0233040 MtrunA17_Chr7g0234231 31.336 217 140 5 28 239 25 237 1.86e-26 109
Msa0233040 MtrunA17_Chr7g0234231 27.064 218 145 5 506 713 24 237 3.57e-20 90.9
Msa0233040 MtrunA17_Chr7g0234231 30.000 180 117 4 309 481 60 237 1.31e-19 89.4
Msa0233040 MtrunA17_Chr1g0206461 30.088 226 149 3 31 250 36 258 4.27e-26 114
Msa0233040 MtrunA17_Chr1g0206461 29.952 207 140 2 511 713 42 247 1.59e-20 96.7
Msa0233040 MtrunA17_Chr1g0206461 29.461 241 155 7 253 481 10 247 2.04e-17 86.7
Msa0233040 MtrunA17_Chr1g0206531 31.004 229 146 3 31 250 36 261 1.39e-25 112
Msa0233040 MtrunA17_Chr1g0206531 30.189 212 136 3 511 713 42 250 8.26e-21 97.4
Msa0233040 MtrunA17_Chr1g0206531 29.508 244 154 6 253 481 10 250 5.66e-18 88.6
Msa0233040 MtrunA17_Chr2g0322981 32.367 207 134 4 37 238 38 243 9.89e-25 103
Msa0233040 MtrunA17_Chr2g0322981 29.508 183 121 4 509 683 32 214 9.45e-22 95.1
Msa0233040 MtrunA17_Chr2g0322981 30.508 236 140 8 255 467 7 241 1.79e-19 88.6
Msa0233040 MtrunA17_Chr2g0322981 29.570 186 112 6 425 606 76 246 2.46e-11 64.7
Msa0233040 MtrunA17_Chr5g0428531 29.675 246 154 5 8 240 9 248 3.65e-24 103
Msa0233040 MtrunA17_Chr5g0428531 27.230 213 146 3 511 714 36 248 6.76e-17 82.0
Msa0233040 MtrunA17_Chr5g0428531 26.749 243 163 5 254 482 7 248 7.42e-17 82.0
Msa0233040 MtrunA17_Chr1g0206331 32.547 212 132 4 43 244 47 257 4.98e-24 107
Msa0233040 MtrunA17_Chr1g0206331 32.039 206 127 5 524 718 54 257 5.85e-23 104
Msa0233040 MtrunA17_Chr1g0206331 29.108 213 135 7 284 483 45 254 2.76e-18 89.4
Msa0233040 MtrunA17_Chr1g0205771 32.057 209 130 4 43 242 56 261 5.16e-24 107
Msa0233040 MtrunA17_Chr1g0205771 28.631 241 166 3 513 747 52 292 2.35e-21 99.4
Msa0233040 MtrunA17_Chr1g0205771 31.111 225 130 8 275 481 41 258 9.99e-18 87.8
Msa0233040 MtrunA17_Chr8g0354351 28.283 198 141 1 43 239 45 242 3.03e-23 105
Msa0233040 MtrunA17_Chr8g0354351 28.704 216 141 4 541 744 69 283 2.46e-22 102
Msa0233040 MtrunA17_Chr8g0354351 27.586 174 123 2 311 481 69 242 4.67e-17 85.5
Msa0233040 MtrunA17_Chr8g0354411 32.524 206 127 4 43 239 45 247 3.36e-23 101
Msa0233040 MtrunA17_Chr8g0354411 28.037 214 137 4 551 747 83 296 6.86e-19 88.6
Msa0233040 MtrunA17_Chr8g0354411 25.431 232 158 5 275 493 30 259 1.51e-16 81.3
Msa0233040 MtrunA17_Chr5g0428571 29.108 213 147 1 31 239 33 245 4.98e-23 103
Msa0233040 MtrunA17_Chr5g0428571 29.046 241 150 4 478 713 21 245 4.76e-21 97.8
Msa0233040 MtrunA17_Chr5g0428571 28.505 214 128 4 283 481 42 245 3.16e-17 85.5
Msa0233040 MtrunA17_Chr8g0354421 26.613 248 172 5 1 239 23 269 1.87e-22 102
Msa0233040 MtrunA17_Chr8g0354421 24.706 255 175 7 508 747 54 306 7.01e-19 91.3
Msa0233040 MtrunA17_Chr8g0354421 27.602 221 143 6 275 481 52 269 4.52e-15 79.3
Msa0233040 MtrunA17_Chr6g0474971 27.187 320 191 10 4 304 6 302 5.35e-22 97.4
Msa0233040 MtrunA17_Chr6g0474971 29.825 228 134 5 508 716 26 246 1.70e-20 93.2
Msa0233040 MtrunA17_Chr6g0474971 26.236 263 169 8 293 534 44 302 1.23e-17 84.7
Msa0233040 MtrunA17_Chr1g0206351 30.734 218 137 5 36 242 42 256 1.17e-21 100
Msa0233040 MtrunA17_Chr1g0206351 30.045 223 142 6 505 716 37 256 2.96e-21 99.0
Msa0233040 MtrunA17_Chr1g0206351 29.204 226 139 9 274 484 37 256 6.90e-16 81.6
Msa0233040 MtrunA17_Chr1g0206571 31.489 235 147 7 492 717 32 261 2.22e-21 95.9
Msa0233040 MtrunA17_Chr1g0206571 29.911 224 147 6 30 243 38 261 5.15e-21 94.7
Msa0233040 MtrunA17_Chr1g0206571 31.799 239 140 10 261 485 32 261 6.07e-18 85.5
Msa0233040 MtrunA17_Chr5g0394011 30.876 217 135 9 43 246 46 260 4.59e-21 98.2
Msa0233040 MtrunA17_Chr5g0394011 28.807 243 150 10 522 743 51 291 6.32e-20 94.7
Msa0233040 MtrunA17_Chr5g0394011 31.148 183 107 9 284 452 44 221 1.82e-15 80.5
Msa0233040 MtrunA17_Chr1g0206361 35.211 213 120 8 44 245 53 258 7.16e-21 97.8
Msa0233040 MtrunA17_Chr1g0206361 29.796 245 148 8 522 746 53 293 1.96e-18 90.1
Msa0233040 MtrunA17_Chr1g0206361 33.173 208 123 10 289 485 54 256 4.70e-13 72.8
Msa0233040 MtrunA17_Chr1g0154361 25.806 248 173 5 2 239 5 251 1.76e-20 93.2
Msa0233040 MtrunA17_Chr1g0154361 27.861 201 135 5 522 713 52 251 2.17e-15 77.8
Msa0233040 MtrunA17_Chr1g0154361 29.245 212 131 7 284 481 45 251 2.66e-14 74.7
Msa0233040 MtrunA17_Chr1g0206521 31.222 221 143 4 31 245 679 896 3.88e-20 96.3
Msa0233040 MtrunA17_Chr1g0206521 30.769 221 144 4 31 245 37 254 5.44e-19 92.4
Msa0233040 MtrunA17_Chr1g0206521 29.255 188 124 3 538 719 712 896 1.13e-16 85.1
Msa0233040 MtrunA17_Chr1g0206521 29.255 188 124 4 538 719 70 254 1.73e-15 81.3
Msa0233040 MtrunA17_Chr1g0206521 28.723 188 123 5 308 487 712 896 1.50e-14 78.2
Msa0233040 MtrunA17_Chr1g0206521 27.660 188 125 5 308 487 70 254 6.87e-14 75.9
Msa0233040 MtrunA17_Chr8g0354341 27.451 204 139 4 43 239 44 245 4.49e-20 90.9
Msa0233040 MtrunA17_Chr8g0354341 25.373 201 136 3 515 713 57 245 3.39e-18 85.5
Msa0233040 MtrunA17_Chr8g0354341 27.500 200 129 4 286 481 58 245 1.19e-17 83.6
Msa0233040 MtrunA17_Chr1g0206291 31.696 224 140 8 30 243 48 268 1.30e-19 93.2
Msa0233040 MtrunA17_Chr1g0206291 30.222 225 137 9 509 717 48 268 1.77e-16 83.2
Msa0233040 MtrunA17_Chr1g0206291 30.000 230 135 11 284 495 57 278 7.70e-15 78.2
Msa0233040 MtrunA17_Chr1g0154371 28.230 209 142 3 5 205 22 230 5.60e-19 91.7
Msa0233040 MtrunA17_Chr1g0154371 27.092 251 164 6 480 713 18 266 1.16e-18 90.9
Msa0233040 MtrunA17_Chr1g0154371 28.244 262 154 11 246 481 13 266 7.42e-15 78.6
Msa0233040 MtrunA17_Chr1g0206381 26.201 229 145 4 31 242 33 254 1.16e-18 88.2
Msa0233040 MtrunA17_Chr1g0206381 26.122 245 149 7 503 730 34 263 7.31e-15 76.6
Msa0233040 MtrunA17_Chr1g0206381 28.879 232 136 7 294 503 52 276 7.94e-15 76.6
Msa0233040 MtrunA17_Chr1g0154311 29.680 219 145 4 30 239 34 252 1.63e-18 90.1
Msa0233040 MtrunA17_Chr1g0154311 29.524 210 141 3 511 713 43 252 4.73e-17 85.5
Msa0233040 MtrunA17_Chr1g0154311 32.381 210 126 7 284 481 47 252 3.43e-15 79.7
Msa0233040 MtrunA17_Chr6g0474861 31.841 201 121 6 523 713 49 243 3.56e-18 89.0
Msa0233040 MtrunA17_Chr6g0474861 33.333 168 105 4 43 205 43 208 8.58e-18 87.8
Msa0233040 MtrunA17_Chr6g0474861 28.426 197 131 5 293 481 49 243 1.35e-14 77.4
Msa0233040 MtrunA17_Chr1g0206401 26.222 225 140 5 36 242 33 249 6.07e-18 88.6
Msa0233040 MtrunA17_Chr1g0206401 28.436 211 123 5 294 484 47 249 2.62e-15 80.1
Msa0233040 MtrunA17_Chr1g0206401 24.783 230 144 6 505 716 31 249 4.01e-13 73.2
Msa0233040 MtrunA17_Chr1g0154321 30.570 193 120 5 30 209 32 223 8.13e-18 88.2
Msa0233040 MtrunA17_Chr1g0154321 26.761 213 129 8 284 476 45 250 8.33e-12 68.9
Msa0233040 MtrunA17_Chr1g0154321 25.743 202 130 5 522 707 52 249 9.97e-12 68.6
Msa0233040 MtrunA17_Chr8g0354281 26.733 202 143 3 43 239 45 246 1.16e-17 87.4
Msa0233040 MtrunA17_Chr8g0354281 25.893 224 145 6 539 744 67 287 4.68e-17 85.5
Msa0233040 MtrunA17_Chr8g0354281 24.118 170 121 3 318 481 79 246 2.59e-12 70.5
Msa0233040 MtrunA17_Chr5g0393981 28.095 210 130 4 43 240 118 318 3.29e-17 86.3
Msa0233040 MtrunA17_Chr5g0393981 24.380 242 170 5 513 747 114 349 7.81e-14 75.5
Msa0233040 MtrunA17_Chr1g0206651 25.306 245 168 7 6 239 10 250 3.70e-17 82.0
Msa0233040 MtrunA17_Chr5g0426941 26.638 229 152 3 31 247 24 248 4.34e-17 85.5
Msa0233040 MtrunA17_Chr5g0426941 25.000 240 161 6 511 735 27 262 3.73e-14 76.3
Msa0233040 MtrunA17_Chr1g0206561 28.862 246 164 3 10 250 10 249 4.49e-17 85.5
Msa0233040 MtrunA17_Chr1g0154351 27.273 253 164 8 2 239 5 252 1.07e-16 84.3
Msa0233040 MtrunA17_Chr1g0154351 27.861 201 136 4 522 713 52 252 1.17e-14 77.8
Msa0233040 MtrunA17_Chr1g0154351 31.628 215 123 9 284 481 45 252 1.10e-13 74.7
Msa0233040 MtrunA17_Chr1g0154341 25.792 221 153 5 30 239 32 252 1.16e-16 81.3
Msa0233040 MtrunA17_Chr1g0154341 25.957 235 153 6 511 728 41 271 2.67e-15 77.0
Msa0233040 MtrunA17_Chr1g0154341 29.148 223 134 9 284 489 45 260 1.18e-14 75.1
Msa0233040 MtrunA17_Chr8g0354441 27.273 165 118 2 77 239 91 255 2.56e-16 83.2
Msa0233040 MtrunA17_Chr8g0354441 24.510 204 146 4 551 747 91 293 1.51e-15 80.9
Msa0233040 MtrunA17_Chr5g0394001 29.091 220 146 6 28 239 32 249 3.55e-16 82.8
Msa0233040 MtrunA17_Chr5g0394001 27.477 222 144 7 506 713 31 249 8.91e-14 75.1
Msa0233040 MtrunA17_Chr5g0394001 26.577 222 145 7 275 481 31 249 2.66e-11 67.0
Msa0233040 MtrunA17_Chr8g0354431 27.536 207 136 6 43 239 45 247 6.00e-15 79.0
Msa0233040 MtrunA17_Chr8g0354431 26.519 181 119 5 543 713 71 247 8.30e-13 72.0
Msa0233040 MtrunA17_Chr8g0354431 23.478 230 165 5 275 493 30 259 2.23e-11 67.4
Msa0233040 MtrunA17_Chr5g0394021 27.602 221 143 8 539 747 70 285 8.78e-15 78.2
Msa0233040 MtrunA17_Chr5g0394021 26.257 179 127 4 65 239 70 247 2.18e-12 70.5
Msa0233040 MtrunA17_Chr5g0394021 26.257 179 125 5 309 481 70 247 9.03e-11 65.5
Msa0233040 MtrunA17_Chr3g0119041 25.126 199 125 5 537 713 65 261 1.81e-14 77.4
Msa0233040 MtrunA17_Chr3g0119041 27.149 221 136 7 41 239 44 261 1.64e-13 74.3
Msa0233040 MtrunA17_Chr1g0206231 26.768 198 139 5 522 713 56 253 2.81e-14 76.6
Msa0233040 MtrunA17_Chr1g0206231 26.705 176 124 4 44 214 52 227 1.13e-13 74.7
Msa0233040 MtrunA17_Chr1g0206451 29.954 217 140 4 31 238 71 284 2.33e-13 73.9
Msa0233040 MtrunA17_Chr1g0206451 29.189 185 117 5 538 712 104 284 1.14e-12 71.6
Msa0233040 MtrunA17_Chr1g0206581 26.033 242 159 9 25 247 47 287 2.96e-13 71.2
Msa0233040 MtrunA17_Chr1g0206581 29.208 202 123 9 538 721 88 287 2.25e-12 68.6
Msa0233040 MtrunA17_Chr1g0206581 25.604 207 128 6 308 492 88 290 7.36e-11 63.9
Msa0233040 MtrunA17_Chr1g0206601 23.849 239 170 7 20 247 46 283 4.08e-13 70.5
Msa0233040 MtrunA17_Chr1g0206601 26.943 193 131 5 538 721 92 283 1.54e-11 65.9
Msa0233040 MtrunA17_Chr1g0206601 24.164 269 179 8 244 492 23 286 7.13e-11 63.9
Msa0233040 MtrunA17_Chr1g0206201 26.404 178 124 3 43 214 51 227 6.66e-12 67.0
Msa0233040 MtrunA17_Chr1g0206201 24.038 208 149 4 523 724 57 261 1.72e-11 65.9
Msa0233040 MtrunA17_Chr3g0110311 26.667 165 107 3 43 205 41 193 2.18e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233040 AT4G23170.1 32.394 213 127 6 42 243 43 249 1.99e-23 100
Msa0233040 AT4G23170.1 34.314 204 115 7 522 713 49 245 6.22e-21 93.6
Msa0233040 AT4G23170.1 31.343 201 123 4 292 481 49 245 1.71e-15 77.8
Msa0233040 AT4G23180.3 32.536 209 133 4 37 240 49 254 3.89e-23 104
Msa0233040 AT4G23180.3 32.870 216 123 7 510 713 48 253 6.32e-21 97.4
Msa0233040 AT4G23180.3 31.651 218 128 5 278 481 43 253 4.41e-19 91.7
Msa0233040 AT4G23180.2 32.536 209 133 4 37 240 49 254 8.44e-23 103
Msa0233040 AT4G23180.2 32.870 216 123 7 510 713 48 253 1.05e-20 97.4
Msa0233040 AT4G23180.2 31.651 218 128 5 278 481 43 253 8.52e-19 91.3
Msa0233040 AT4G23180.1 31.925 213 129 4 37 240 49 254 1.18e-22 103
Msa0233040 AT4G23180.1 32.870 216 123 7 510 713 48 253 9.29e-21 97.8
Msa0233040 AT4G23180.1 31.651 218 128 5 278 481 43 253 6.79e-19 92.0
Msa0233040 AT4G05200.2 33.810 210 120 9 43 239 63 266 3.05e-22 102
Msa0233040 AT4G05200.2 30.882 204 124 8 522 713 68 266 1.20e-19 94.4
Msa0233040 AT4G05200.2 34.975 203 115 9 292 481 68 266 1.28e-19 94.4
Msa0233040 AT4G05200.1 33.810 210 120 9 43 239 45 248 3.08e-22 102
Msa0233040 AT4G05200.1 34.975 203 115 9 292 481 50 248 1.29e-19 94.4
Msa0233040 AT4G05200.1 30.882 204 124 8 522 713 50 248 1.29e-19 94.4
Msa0233040 AT4G23160.1 33.796 216 118 8 43 243 61 266 4.76e-22 102
Msa0233040 AT4G23160.1 29.915 234 137 7 522 739 66 288 4.46e-18 89.4
Msa0233040 AT4G23160.1 31.858 226 130 8 284 492 59 277 5.04e-16 82.8
Msa0233040 AT4G23160.3 33.796 216 118 8 43 243 641 846 8.87e-22 101
Msa0233040 AT4G23160.3 29.915 234 137 7 522 739 646 868 5.09e-18 89.7
Msa0233040 AT4G23160.3 31.452 248 141 9 262 492 622 857 7.00e-16 82.8
Msa0233040 AT4G23160.2 33.796 216 118 8 43 243 641 846 8.87e-22 101
Msa0233040 AT4G23160.2 29.915 234 137 7 522 739 646 868 5.09e-18 89.7
Msa0233040 AT4G23160.2 31.452 248 141 9 262 492 622 857 7.00e-16 82.8
Msa0233040 AT4G23140.1 33.679 193 110 6 58 239 61 246 3.57e-21 99.0
Msa0233040 AT4G23140.1 32.057 209 126 4 284 481 43 246 5.05e-18 89.0
Msa0233040 AT4G23140.1 31.217 189 108 6 538 713 67 246 3.21e-16 83.2
Msa0233040 AT4G23140.2 33.679 193 110 6 58 239 61 246 3.78e-21 99.0
Msa0233040 AT4G23140.2 32.057 209 126 4 284 481 43 246 5.42e-18 89.0
Msa0233040 AT4G23140.2 31.217 189 108 6 538 713 67 246 3.18e-16 83.6
Msa0233040 AT3G22060.1 27.358 212 148 5 31 238 39 248 7.05e-20 90.5
Msa0233040 AT3G22060.1 29.208 202 133 6 519 712 49 248 2.60e-18 85.9
Msa0233040 AT3G22060.1 28.169 213 139 7 279 480 39 248 3.89e-15 76.6
Msa0233040 AT5G48540.1 30.332 211 139 4 47 250 43 252 2.04e-19 89.4
Msa0233040 AT5G48540.1 28.846 208 139 5 513 713 36 241 1.66e-17 83.6
Msa0233040 AT5G48540.1 29.730 222 115 9 284 481 37 241 1.70e-17 83.6
Msa0233040 AT4G23310.1 33.333 177 106 4 43 211 157 329 1.18e-18 91.3
Msa0233040 AT4G23310.1 32.919 161 103 3 524 679 164 324 3.31e-15 80.5
Msa0233040 AT4G23310.1 29.825 171 111 4 292 455 162 330 1.90e-11 68.2
Msa0233040 AT4G23310.2 33.333 177 106 4 43 211 157 329 1.18e-18 91.3
Msa0233040 AT4G23310.2 32.919 161 103 3 524 679 164 324 3.84e-15 80.1
Msa0233040 AT4G23310.2 29.825 171 111 4 292 455 162 330 1.86e-11 68.2
Msa0233040 AT4G23230.1 33.333 174 106 4 44 209 43 214 1.34e-18 90.9
Msa0233040 AT4G23230.1 30.814 172 105 3 522 683 47 214 2.40e-14 77.4
Msa0233040 AT4G23230.1 31.188 202 120 6 292 481 47 241 3.92e-13 73.6
Msa0233040 AT1G61750.1 30.097 206 131 6 37 233 39 240 3.42e-18 87.0
Msa0233040 AT1G61750.1 28.293 205 121 4 518 708 49 241 2.21e-16 81.6
Msa0233040 AT1G61750.1 29.864 221 125 9 275 475 30 240 1.26e-14 76.3
Msa0233040 AT4G20670.1 26.549 226 148 4 31 243 38 258 5.23e-18 85.1
Msa0233040 AT4G20670.1 24.883 213 138 5 522 717 51 258 2.47e-12 68.6
Msa0233040 AT3G45860.1 31.556 225 133 8 31 243 36 251 6.46e-18 89.0
Msa0233040 AT3G45860.1 31.016 187 109 6 538 713 70 247 5.16e-15 79.3
Msa0233040 AT3G45860.1 28.111 217 138 4 276 481 38 247 6.60e-13 72.8
Msa0233040 AT4G20640.1 26.339 224 147 4 31 241 38 256 9.12e-18 84.3
Msa0233040 AT4G20640.1 24.645 211 137 5 522 715 51 256 3.63e-12 67.8
Msa0233040 AT4G20630.1 26.339 224 147 4 31 241 38 256 9.12e-18 84.3
Msa0233040 AT4G20630.1 24.645 211 137 5 522 715 51 256 3.63e-12 67.8
Msa0233040 AT4G20580.1 26.339 224 147 4 31 241 38 256 9.12e-18 84.3
Msa0233040 AT4G20580.1 24.645 211 137 5 522 715 51 256 3.63e-12 67.8
Msa0233040 AT4G20600.1 26.339 224 147 4 31 241 38 256 9.12e-18 84.3
Msa0233040 AT4G20600.1 24.645 211 137 5 522 715 51 256 3.63e-12 67.8
Msa0233040 AT4G20620.1 26.339 224 147 4 31 241 38 256 9.12e-18 84.3
Msa0233040 AT4G20620.1 24.645 211 137 5 522 715 51 256 3.63e-12 67.8
Msa0233040 AT4G20610.1 26.339 224 147 4 31 241 38 256 9.12e-18 84.3
Msa0233040 AT4G20610.1 24.645 211 137 5 522 715 51 256 3.63e-12 67.8
Msa0233040 AT4G20590.1 26.339 224 147 4 31 241 38 256 9.12e-18 84.3
Msa0233040 AT4G20590.1 24.645 211 137 5 522 715 51 256 3.63e-12 67.8
Msa0233040 AT1G63580.1 28.241 216 141 6 42 245 35 248 1.35e-17 84.3
Msa0233040 AT1G63580.1 24.710 259 172 8 506 745 17 271 9.29e-14 72.8
Msa0233040 AT1G63580.1 24.597 248 165 8 253 487 10 248 1.39e-12 69.3
Msa0233040 AT4G23150.1 31.481 216 123 6 43 243 44 249 1.56e-17 87.4
Msa0233040 AT4G23150.1 30.000 190 109 5 538 713 66 245 5.79e-16 82.4
Msa0233040 AT4G23150.1 27.027 185 119 4 308 481 66 245 3.91e-11 67.0
Msa0233040 AT4G20570.1 26.339 224 147 4 31 241 52 270 2.01e-17 83.6
Msa0233040 AT4G20570.1 24.645 211 137 5 522 715 65 270 6.82e-12 67.0
Msa0233040 AT4G20560.1 26.339 224 147 4 31 241 52 270 2.01e-17 83.6
Msa0233040 AT4G20560.1 24.645 211 137 5 522 715 65 270 6.82e-12 67.0
Msa0233040 AT4G20540.1 26.339 224 147 4 31 241 52 270 2.01e-17 83.6
Msa0233040 AT4G20540.1 24.645 211 137 5 522 715 65 270 6.82e-12 67.0
Msa0233040 AT4G20645.1 26.339 224 147 4 31 241 52 270 2.01e-17 83.6
Msa0233040 AT4G20645.1 24.645 211 137 5 522 715 65 270 6.82e-12 67.0
Msa0233040 AT4G20530.1 26.339 224 147 4 31 241 52 270 2.01e-17 83.6
Msa0233040 AT4G20530.1 24.645 211 137 5 522 715 65 270 6.82e-12 67.0
Msa0233040 AT4G20550.1 26.339 224 147 4 31 241 52 270 2.01e-17 83.6
Msa0233040 AT4G20550.1 24.645 211 137 5 522 715 65 270 6.82e-12 67.0
Msa0233040 AT4G23270.2 29.101 189 125 3 538 720 64 249 3.02e-17 86.7
Msa0233040 AT4G23270.2 32.558 215 124 8 43 244 41 247 4.08e-15 79.7
Msa0233040 AT4G23270.2 29.444 180 118 4 308 481 64 240 2.69e-12 70.9
Msa0233040 AT4G23270.1 29.101 189 125 3 538 720 64 249 3.02e-17 86.7
Msa0233040 AT4G23270.1 32.558 215 124 8 43 244 41 247 4.08e-15 79.7
Msa0233040 AT4G23270.1 29.444 180 118 4 308 481 64 240 2.69e-12 70.9
Msa0233040 AT4G23270.3 29.101 189 125 3 538 720 64 249 3.39e-17 86.3
Msa0233040 AT4G23270.3 32.558 215 124 8 43 244 41 247 5.31e-15 79.3
Msa0233040 AT4G23270.3 29.444 180 118 4 308 481 64 240 2.99e-12 70.5
Msa0233040 AT4G11521.1 26.066 211 136 2 43 238 36 241 3.41e-17 82.8
Msa0233040 AT4G11521.1 28.293 205 121 7 295 480 44 241 7.23e-15 75.9
Msa0233040 AT4G11521.1 25.123 203 132 2 525 712 44 241 7.99e-14 72.8
Msa0233040 AT4G11530.1 27.143 210 139 3 43 238 37 246 4.10e-17 86.3
Msa0233040 AT4G11530.1 28.571 224 140 6 282 486 33 255 1.80e-16 84.3
Msa0233040 AT4G11530.1 24.020 204 141 3 523 712 43 246 5.56e-13 72.8
Msa0233040 AT4G38830.1 28.947 228 142 7 30 244 30 250 8.40e-17 85.1
Msa0233040 AT4G38830.1 27.803 223 146 5 516 729 45 261 1.49e-16 84.3
Msa0233040 AT3G58310.1 24.670 227 164 4 21 242 33 257 8.43e-17 81.6
Msa0233040 AT3G58310.1 24.779 226 160 5 500 716 33 257 3.74e-14 73.6
Msa0233040 AT3G58310.1 24.229 227 159 6 269 484 33 257 4.22e-11 64.7
Msa0233040 AT4G23280.1 34.579 214 120 8 43 244 44 249 1.73e-16 84.3
Msa0233040 AT4G23280.1 29.319 191 122 4 538 720 66 251 3.90e-16 83.2
Msa0233040 AT4G23280.1 27.830 212 144 4 276 481 34 242 3.75e-14 76.6
Msa0233040 AT4G23280.3 34.579 214 120 8 43 244 44 249 1.77e-16 84.0
Msa0233040 AT4G23280.3 29.319 191 122 4 538 720 66 251 4.51e-16 82.8
Msa0233040 AT4G23280.3 27.830 212 144 4 276 481 34 242 3.36e-14 76.6
Msa0233040 AT4G23240.1 27.500 320 203 10 253 555 14 321 1.84e-16 84.0
Msa0233040 AT4G23240.1 25.911 247 160 5 523 747 46 291 2.36e-16 83.6
Msa0233040 AT4G23240.1 26.621 293 196 5 42 325 39 321 3.68e-16 83.2
Msa0233040 AT4G23280.2 34.579 214 120 8 43 244 44 249 1.85e-16 84.0
Msa0233040 AT4G23280.2 29.319 191 122 4 538 720 66 251 4.27e-16 82.8
Msa0233040 AT4G23280.2 27.830 212 144 4 276 481 34 242 4.37e-14 76.6
Msa0233040 AT4G23190.2 27.103 214 141 5 43 242 39 251 2.16e-16 83.6
Msa0233040 AT4G23190.2 24.138 203 138 5 525 712 47 248 2.70e-12 70.5
Msa0233040 AT4G23190.1 27.103 214 141 5 43 242 39 251 2.96e-16 83.6
Msa0233040 AT4G23190.1 24.020 204 137 5 525 712 47 248 2.88e-12 70.5
Msa0233040 AT3G21990.1 24.658 219 157 3 31 241 38 256 3.37e-16 79.7
Msa0233040 AT4G23130.3 28.704 216 143 6 506 713 32 244 5.76e-16 82.4
Msa0233040 AT4G23130.3 27.586 203 132 4 46 239 48 244 5.23e-14 75.9
Msa0233040 AT4G23130.3 28.218 202 126 5 292 481 50 244 4.24e-13 73.2
Msa0233040 AT4G23130.1 28.704 216 143 6 506 713 32 244 7.32e-16 82.0
Msa0233040 AT4G23130.1 27.586 203 132 4 46 239 48 244 5.72e-14 76.3
Msa0233040 AT4G23130.1 28.358 201 127 5 292 481 50 244 4.78e-13 73.2
Msa0233040 AT4G23130.2 28.704 216 143 6 506 713 32 244 8.46e-16 82.0
Msa0233040 AT4G23130.2 27.586 203 132 4 46 239 48 244 6.22e-14 75.9
Msa0233040 AT4G23130.2 28.358 201 127 5 292 481 50 244 5.15e-13 73.2
Msa0233040 AT2G31620.1 24.051 237 149 5 21 238 28 252 1.47e-15 77.8
Msa0233040 AT2G31620.1 26.050 238 138 8 500 712 28 252 1.98e-13 71.6
Msa0233040 AT2G31620.1 25.523 239 137 9 269 480 28 252 3.07e-11 65.1
Msa0233040 AT4G23220.1 26.840 231 149 5 39 253 32 258 1.89e-15 80.9
Msa0233040 AT4G23220.1 27.753 227 142 7 295 503 44 266 5.48e-13 72.8
Msa0233040 AT4G23220.1 21.805 266 176 7 510 747 25 286 8.20e-11 65.9
Msa0233040 AT4G21410.2 27.660 235 140 9 538 746 68 298 5.19e-15 79.0
Msa0233040 AT4G21410.2 29.379 177 118 4 36 205 40 216 2.00e-13 73.9
Msa0233040 AT4G04570.2 26.291 213 139 3 43 239 41 251 8.46e-15 78.6
Msa0233040 AT4G04570.2 25.366 205 139 4 523 713 47 251 7.61e-13 72.4
Msa0233040 AT4G04570.2 26.126 222 139 7 293 492 47 265 1.53e-11 68.2
Msa0233040 AT4G04570.1 26.291 213 139 3 43 239 41 251 9.25e-15 78.6
Msa0233040 AT4G04570.1 25.366 205 139 4 523 713 47 251 6.16e-13 72.8
Msa0233040 AT4G04570.1 27.027 222 137 8 293 492 47 265 1.35e-11 68.6
Msa0233040 AT4G23200.2 24.883 213 147 3 39 238 31 243 9.26e-15 78.2
Msa0233040 AT4G23200.2 23.077 221 157 4 523 730 41 261 4.76e-13 72.8
Msa0233040 AT4G21410.3 27.234 235 141 9 538 746 68 298 1.08e-14 78.6
Msa0233040 AT4G21410.3 29.379 177 118 4 36 205 40 216 3.38e-13 73.6
Msa0233040 AT4G23200.1 24.883 213 147 3 39 238 31 243 1.32e-14 78.2
Msa0233040 AT4G23200.1 23.077 221 157 4 523 730 41 261 6.14e-13 72.8
Msa0233040 AT4G23210.1 23.849 239 166 3 16 238 12 250 2.52e-14 77.0
Msa0233040 AT4G23210.1 23.039 204 141 3 525 712 47 250 1.97e-11 67.8
Msa0233040 AT4G23210.2 25.472 212 142 3 43 238 39 250 3.23e-14 76.6
Msa0233040 AT4G23210.2 23.039 204 141 3 525 712 47 250 3.01e-11 67.0
Msa0233040 AT4G23210.4 25.472 212 142 3 43 238 39 250 3.23e-14 76.6
Msa0233040 AT4G23210.4 23.039 204 141 3 525 712 47 250 3.01e-11 67.0
Msa0233040 AT5G41290.1 25.121 207 147 2 511 710 39 244 3.62e-14 74.3
Msa0233040 AT5G41290.1 24.186 215 155 2 29 236 31 244 3.86e-14 74.3
Msa0233040 AT4G23210.5 25.472 212 142 3 43 238 39 250 3.63e-14 76.3
Msa0233040 AT4G23210.5 23.039 204 141 3 525 712 47 250 3.18e-11 67.0
Msa0233040 AT4G23210.3 23.849 239 166 3 16 238 12 250 4.09e-14 76.6
Msa0233040 AT4G23210.3 23.039 204 141 3 525 712 47 250 2.94e-11 67.4
Msa0233040 AT5G41300.1 25.688 218 142 5 29 233 35 245 1.25e-13 72.8
Msa0233040 AT5G41300.1 25.714 210 136 5 511 707 43 245 6.51e-12 67.4
Msa0233040 AT4G23300.1 25.000 212 143 3 43 238 39 250 1.47e-13 74.7
Msa0233040 AT4G23300.1 23.529 204 140 3 525 712 47 250 1.44e-11 68.6
Msa0233040 AT4G04500.1 26.087 230 144 7 507 713 27 253 1.65e-13 74.7
Msa0233040 AT3G21960.1 22.892 249 179 6 4 241 16 262 1.72e-13 71.6
Msa0233040 AT4G04500.2 25.551 227 149 6 507 713 27 253 1.74e-13 74.3
Msa0233040 AT4G04500.3 25.551 227 149 6 507 713 27 253 1.74e-13 74.3
Msa0233040 AT4G11490.1 27.602 221 139 5 43 247 39 254 1.97e-13 74.3
Msa0233040 AT4G11490.1 24.180 244 155 7 523 745 45 279 1.07e-11 68.9
Msa0233040 AT4G11490.1 23.605 233 140 7 293 496 45 268 9.85e-11 65.9
Msa0233040 AT4G11460.3 25.217 230 152 4 27 238 23 250 3.48e-13 73.6
Msa0233040 AT4G11460.3 25.000 208 136 4 523 712 45 250 4.28e-13 73.6
Msa0233040 AT4G11460.1 25.217 230 152 4 27 238 23 250 3.49e-13 73.6
Msa0233040 AT4G11460.1 25.000 208 136 4 523 712 45 250 4.29e-13 73.6
Msa0233040 AT4G11480.2 26.442 208 135 5 43 238 37 238 5.20e-13 72.4
Msa0233040 AT1G63550.1 26.728 217 142 7 29 234 34 244 5.96e-13 71.2
Msa0233040 AT4G11480.4 26.442 208 135 5 43 238 37 238 6.96e-13 72.8
Msa0233040 AT4G11480.1 26.442 208 135 5 43 238 37 238 7.09e-13 72.8
Msa0233040 AT4G11480.3 26.442 208 135 5 43 238 37 238 7.29e-13 72.4
Msa0233040 AT4G04490.1 28.689 244 128 12 278 489 29 258 1.17e-12 72.0
Msa0233040 AT4G04490.1 27.027 222 132 6 40 238 32 246 2.52e-11 67.8
Msa0233040 AT4G21230.1 24.771 218 149 5 29 239 32 241 1.50e-12 71.6
Msa0233040 AT3G21910.1 22.609 230 164 5 23 238 36 265 9.47e-12 67.0
Msa0233040 AT4G21400.3 28.070 228 144 7 4 217 6 227 1.22e-11 68.2
Msa0233040 AT4G21400.3 24.623 199 143 3 538 729 70 268 1.88e-11 67.8
Msa0233040 AT4G21400.6 27.830 212 139 5 16 217 20 227 1.25e-11 68.6
Msa0233040 AT4G21400.6 24.623 199 143 3 538 729 70 268 1.58e-11 68.2
Msa0233040 AT4G21400.4 27.830 212 139 5 16 217 20 227 1.25e-11 68.6
Msa0233040 AT4G21400.4 24.623 199 143 3 538 729 70 268 1.58e-11 68.2
Msa0233040 AT4G21400.5 27.830 212 139 5 16 217 20 227 1.25e-11 68.6
Msa0233040 AT4G21400.5 24.623 199 143 3 538 729 70 268 1.58e-11 68.2
Msa0233040 AT3G21920.1 23.364 214 142 5 44 238 57 267 1.30e-11 66.6
Msa0233040 AT4G21400.1 27.830 212 139 5 16 217 20 227 1.44e-11 68.6
Msa0233040 AT4G21400.1 24.623 199 143 3 538 729 70 268 2.82e-11 67.4
Msa0233040 AT4G21400.2 27.830 212 139 5 16 217 20 227 1.56e-11 68.2
Msa0233040 AT4G21400.2 24.623 199 143 3 538 729 70 268 2.83e-11 67.4
Msa0233040 AT3G21920.2 23.364 214 142 5 44 238 79 289 2.18e-11 66.2
Msa0233040 AT1G63570.3 24.713 174 124 2 70 236 69 242 2.22e-11 65.9
Msa0233040 AT1G63570.1 24.713 174 124 2 70 236 69 242 2.22e-11 65.9
Msa0233040 AT3G21970.1 24.000 225 152 7 31 238 39 261 2.31e-11 65.5
Msa0233040 AT4G04540.3 23.853 218 144 4 43 240 40 255 2.85e-11 67.0
Msa0233040 AT4G04540.3 22.707 229 155 4 520 730 47 271 6.39e-11 65.9
Msa0233040 AT1G63590.1 24.681 235 162 6 36 258 37 268 3.03e-11 65.1
Msa0233040 AT4G04540.4 23.963 217 143 4 43 239 40 254 3.39e-11 67.0
Msa0233040 AT4G04540.4 23.707 232 149 6 520 730 47 271 6.81e-11 66.2
Msa0233040 AT3G21930.1 23.148 216 144 5 44 240 57 269 3.60e-11 65.1
Msa0233040 AT1G63600.1 24.537 216 152 5 29 234 38 252 3.61e-11 65.9
Msa0233040 AT4G04540.2 23.853 218 144 4 43 240 40 255 3.98e-11 67.0
Msa0233040 AT4G04540.2 23.581 229 153 5 520 730 47 271 8.73e-11 65.9
Msa0233040 AT4G04540.1 23.963 217 143 4 43 239 40 254 4.16e-11 67.0
Msa0233040 AT4G04540.1 23.707 232 149 6 520 730 47 271 6.79e-11 66.2
Msa0233040 AT1G63570.2 24.713 174 124 2 70 236 122 295 6.82e-11 65.1

Find 137 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCAATTTGAAAACCTTAT+TGG 0.131730 2_2:-5349897 Msa0233040:CDS
AATACAAGATGGGAAATTTA+TGG 0.216837 2_2:-5345889 Msa0233040:CDS
GAAAACTCCAGCAGGATTTA+TGG 0.230555 2_2:-5346324 Msa0233040:CDS
AAAAGAAGATGGGAAATTTA+TGG 0.230790 2_2:-5343118 Msa0233040:CDS
GAAAACTCCAGCAGGGTTTA+TGG 0.231939 2_2:-5343559 Msa0233040:CDS
TGTTATTAGCTTCTTTGTTC+TGG 0.237731 2_2:-5346517 Msa0233040:intron
TATTCAAACGAGAGCTTCTT+TGG 0.271541 2_2:-5346168 Msa0233040:CDS
AGAGTAGAGATGTTACTATT+TGG 0.275258 2_2:-5349706 Msa0233040:CDS
ACTGTAACATCCCTATTCTT+AGG 0.284553 2_2:+5343451 None:intergenic
GATGACACCAATAGAGAAAT+AGG 0.298235 2_2:-5343697 Msa0233040:CDS
TGATGTTGATGACCCTTCTT+TGG 0.300916 2_2:-5343341 Msa0233040:CDS
CAAGAGAATTTAATAAGGTT+TGG 0.309844 2_2:+5343629 None:intergenic
GTGGTGAGTCCTTTGACTTT+TGG 0.313074 2_2:-5349292 Msa0233040:intron
TATCGAACCTATTTCTCTAT+TGG 0.319857 2_2:+5343690 None:intergenic
ATGTTACTATTTGGTTTAGA+TGG 0.328842 2_2:-5349697 Msa0233040:CDS
TGAAGCAAGAGAATTTAATA+AGG 0.330511 2_2:+5343624 None:intergenic
CTTAGTAGCAGTTGCGGTTT+CGG 0.345711 2_2:-5342515 Msa0233040:CDS
CAAATGATTGCCCTAAGAAT+AGG 0.358547 2_2:-5343462 Msa0233040:CDS
ATGTTACAGTTTGGTTTAGT+TGG 0.362652 2_2:-5343438 Msa0233040:CDS
TGTTATCAGCTTCTTTGTCT+TGG 0.368216 2_2:-5350023 Msa0233040:CDS
TGGAGTAGCAGCTGCAGCTT+CGG 0.376748 2_2:-5343293 Msa0233040:CDS
AAGGACACAATTAGAACAAT+TGG 0.378170 2_2:+5349763 None:intergenic
ATTATACCACATGAAACAAT+TGG 0.378881 2_2:+5343093 None:intergenic
TGAAGCAAGAGAATTCAATA+AGG 0.385195 2_2:+5346389 None:intergenic
ATAGTAACATCTCTACTCTT+AGG 0.385860 2_2:+5349710 None:intergenic
AAGCAACTCTTGCGGAGTTA+AGG 0.388905 2_2:+5346250 None:intergenic
TGAAGCAAGAGAATCCAATA+AGG 0.391422 2_2:+5349883 None:intergenic
TTTGTTCTGGTCTTTCCAAA+TGG 0.392240 2_2:-5346504 Msa0233040:CDS
TTTGTCTTGGTCTTTCCAAA+TGG 0.392240 2_2:-5350010 Msa0233040:CDS
AGAGGACTGCAGAAGGTGTT+TGG 0.398608 2_2:-5349438 Msa0233040:CDS
TGCTTTGTGGTACAGTTGCT+TGG 0.401575 2_2:-5342564 Msa0233040:intron
GATGATACTAATAGAGAAAC+AGG 0.402634 2_2:-5349971 Msa0233040:CDS
AAGGTGTTTGGATGCTCAAT+TGG 0.404895 2_2:-5349426 Msa0233040:CDS
GTTACTTTCAGAGCTACAAT+TGG 0.410684 2_2:-5343145 Msa0233040:CDS
TATTCAAACGAGAGCTTCTT+CGG 0.413582 2_2:-5349662 Msa0233040:CDS
GTGGTACAGTTGCTTGGACT+TGG 0.415023 2_2:-5342558 Msa0233040:intron
AAATGATTGCCCTAAGAATA+GGG 0.417098 2_2:-5343461 Msa0233040:CDS
AAAGGACTGCAAAAGGTGTC+TGG 0.422008 2_2:-5345947 Msa0233040:CDS
CTGTAACATCCCTATTCTTA+GGG 0.428336 2_2:+5343452 None:intergenic
AAAAGAAGATGGGAAGTTCA+TGG 0.435418 2_2:-5349377 Msa0233040:CDS
TTTGTTGTAGTCTTTCCAAA+TGG 0.439463 2_2:-5343736 Msa0233040:intron
AGGGTACTCTTGTAGAGTTA+AGG 0.439725 2_2:+5349744 None:intergenic
AGAATAGGGATGTTACAGTT+TGG 0.445140 2_2:-5343447 Msa0233040:CDS
ATCATACCACATGAAACAAC+TGG 0.456202 2_2:+5345864 None:intergenic
CTCTTAGGACAATCATTTGA+GGG 0.456818 2_2:+5349725 None:intergenic
GGACTCACCACTTGGAAGAA+AGG 0.462771 2_2:+5345816 None:intergenic
AAGGTGCCTTGATGATCAAC+TGG 0.473787 2_2:-5343167 Msa0233040:CDS
ATTGTACCATAAAGCCTGTT+CGG 0.475273 2_2:+5349812 None:intergenic
GATCCTTCTGTGGTTTCACA+AGG 0.475482 2_2:-5346099 Msa0233040:CDS
TTATTGGAAATAAAAGAAGA+TGG 0.476139 2_2:-5349388 Msa0233040:CDS
ATGTAATAAAGCTGATAATA+CGG 0.479573 2_2:-5343668 Msa0233040:CDS
AATCAAAGTGAGACGAGGTA+TGG 0.480046 2_2:-5343232 Msa0233040:CDS
GTTATCAGCTTTATCACATA+GGG 0.487429 2_2:+5349946 None:intergenic
CAGTGGTTTGGTAAAATCCT+TGG 0.488835 2_2:+5343587 None:intergenic
TGTTATCAGCTTTATCACAT+AGG 0.490174 2_2:+5349945 None:intergenic
GACCCTTCTTTGGCATCACA+AGG 0.492204 2_2:-5343331 Msa0233040:CDS
AACCCTTGTGATGCCAAAGA+AGG 0.496026 2_2:+5343328 None:intergenic
TCAGTAGAAAGGACTGCAAA+AGG 0.496717 2_2:-5345954 Msa0233040:CDS
AATGTTTCCACTCTTCTAAG+TGG 0.498586 2_2:-5349311 Msa0233040:CDS
TATTGGAAATAAAAGAAGAT+GGG 0.504167 2_2:-5349387 Msa0233040:CDS
AATCAAAGTGAGAAGAGGTA+TGG 0.509596 2_2:-5346000 Msa0233040:CDS
TATTGAACCATAAATCCTGC+TGG 0.512356 2_2:+5346317 None:intergenic
CACAAGAGATATCAGTAGAA+AGG 0.513490 2_2:-5345965 Msa0233040:CDS
ACTCTTAGGACAATCATTTG+AGG 0.514029 2_2:+5349724 None:intergenic
CAATGGTTTGGTAAAATCCA+TGG 0.515661 2_2:+5349846 None:intergenic
CAATGGTTTGGTAAAATCCT+TGG 0.517661 2_2:+5346352 None:intergenic
TATTGAACCATAAACCCTGC+TGG 0.521655 2_2:+5343552 None:intergenic
ATGGTACAATATTATGTAGA+GGG 0.521935 2_2:-5349799 Msa0233040:CDS
ACTAAGCTTCTGCAAGAAGA+AGG 0.530544 2_2:+5342532 None:intergenic
CAATTGGAAATAAAAGAAGA+TGG 0.531508 2_2:-5343129 Msa0233040:CDS
CTGTAGGAGAAAACTCCAGC+AGG 0.532218 2_2:-5343567 Msa0233040:CDS
AGCTGCTACTCCGCTCATGA+AGG 0.533420 2_2:+5349562 None:intergenic
CACAAGAGATATCAATAGAC+AGG 0.537570 2_2:-5343197 Msa0233040:CDS
TTATACCACATGAAACAATT+GGG 0.545504 2_2:+5343094 None:intergenic
CAGAAGCTTAGTAGCAGTTG+CGG 0.546529 2_2:-5342521 Msa0233040:CDS
TCAAACGTCGTTGATAGCCA+TGG 0.549086 2_2:-5349863 Msa0233040:CDS
GAGCTTCTTTGGAGACATGC+AGG 0.549887 2_2:-5346157 Msa0233040:CDS
ATGGATTAAATTGTTTCATG+TGG 0.553417 2_2:-5349358 Msa0233040:CDS
ATCAAAGTGAGACGAGGTAT+GGG 0.555037 2_2:-5343231 Msa0233040:CDS
AATCAAAGTGAGAAGAGGTA+TGG 0.555362 2_2:-5349491 Msa0233040:CDS
TATGGTTCAATATTATGTAG+AGG 0.557939 2_2:-5346306 Msa0233040:CDS
ACTCTAACATCTCTACACTT+AGG 0.558259 2_2:+5346216 None:intergenic
CAAGGGTTACCTTTCATGAG+TGG 0.558522 2_2:-5346081 Msa0233040:CDS
CAATTAGAAATAATACAAGA+TGG 0.559075 2_2:-5345900 Msa0233040:CDS
AAATTCTCTTGCTTCAAATG+TGG 0.560501 2_2:-5343617 Msa0233040:CDS
ATGGATCCAGTTGTTTCATG+TGG 0.561659 2_2:-5345870 Msa0233040:CDS
AAGTGAGAAGAGGTATGGTA+TGG 0.567442 2_2:-5349486 Msa0233040:CDS
TTGCAGGAGAAAACTCCAGC+AGG 0.567895 2_2:-5346332 Msa0233040:CDS
ATGGACCCAATTGTTTCATG+TGG 0.569094 2_2:-5343099 Msa0233040:CDS
AATTGGAAATAAAAGAAGAT+GGG 0.576112 2_2:-5343128 Msa0233040:CDS
GACCCTTCGTTGGTTTCACG+AGG 0.579020 2_2:-5349590 Msa0233040:CDS
AATGTATCCTTTCTTCCAAG+TGG 0.580338 2_2:-5345823 Msa0233040:intron
TCAATAGACAGGACTGCAGA+AGG 0.581918 2_2:-5343186 Msa0233040:CDS
AATTAGAAATAATACAAGAT+GGG 0.583144 2_2:-5345899 Msa0233040:CDS
TATGGTACAATATTATGTAG+AGG 0.584470 2_2:-5349800 Msa0233040:CDS
AAGTAACCAGTTGATCATCA+AGG 0.586503 2_2:+5343161 None:intergenic
GCTGCTACTCCGCTCATGAA+GGG 0.588127 2_2:+5349563 None:intergenic
CTCTATTAGTATCATCTGCA+AGG 0.590747 2_2:+5346472 None:intergenic
AAGAACTAACCAAAAGTCAA+AGG 0.592196 2_2:+5349283 None:intergenic
AATTCTCGTCAGAATAGCGT+AGG 0.592980 2_2:+5343410 None:intergenic
CAAGGGTTACCTTTCATGAG+TGG 0.594982 2_2:-5343313 Msa0233040:CDS
GCTGCTACTCCACTCATGAA+AGG 0.595456 2_2:+5343304 None:intergenic
TCAGTAGAGAGGACTGCAGA+AGG 0.597333 2_2:-5349445 Msa0233040:CDS
AAGTGAGAAGAGGTATGGAA+TGG 0.598662 2_2:-5345995 Msa0233040:CDS
GCTGCTACTCCACTCATGAA+AGG 0.600644 2_2:+5346072 None:intergenic
ACCCTTGTGATGCCAAAGAA+GGG 0.604043 2_2:+5343329 None:intergenic
AGCTTCTTCGGAGAGATGCA+AGG 0.607307 2_2:-5349650 Msa0233040:CDS
AATTTCTTCAGAGACATGCA+TGG 0.609462 2_2:-5343391 Msa0233040:CDS
ACTTCAATCAAAGTGAGAAG+AGG 0.610018 2_2:-5346005 Msa0233040:CDS
GGACTCACCACTTAGAAGAG+TGG 0.610254 2_2:+5349304 None:intergenic
TGATATTGATGATCCTTCTG+TGG 0.611610 2_2:-5346109 Msa0233040:CDS
CACAAGAGATATCAGTAGAG+AGG 0.612891 2_2:-5349456 Msa0233040:CDS
AATGTATCTACTCTTCAAAG+TGG 0.615207 2_2:-5343052 Msa0233040:intron
ACTTTAATCAAAGTGAGAAG+AGG 0.616061 2_2:-5349496 Msa0233040:CDS
TGATATTGACGACCCTTCGT+TGG 0.617151 2_2:-5349600 Msa0233040:CDS
GAATTCTCTTGCTTCAAACG+TGG 0.618324 2_2:-5346382 Msa0233040:CDS
AACATTTGAAGCAACTCTTG+CGG 0.620925 2_2:+5346242 None:intergenic
CTCTATTAGTATCATCACCA+AGG 0.635779 2_2:+5349978 None:intergenic
CGAGGGTTACCCTTCATGAG+CGG 0.639994 2_2:-5349572 Msa0233040:CDS
AAGTGAGACGAGGTATGGGA+TGG 0.640024 2_2:-5343227 Msa0233040:CDS
AGCTCTCGTTTGAATAGTGT+AGG 0.641279 2_2:+5349669 None:intergenic
TAAAGTTTAGTACTTCTGTG+TGG 0.645872 2_2:+5349513 None:intergenic
AGCTCTCGTTTGAATAGCGT+AGG 0.646746 2_2:+5346175 None:intergenic
ATCCTTCTGTGGTTTCACAA+GGG 0.648310 2_2:-5346098 Msa0233040:CDS
TGGTACAATATTATGTAGAG+GGG 0.649326 2_2:-5349798 Msa0233040:CDS
TGAAGTTTAGTTCTTCTGTG+TGG 0.649487 2_2:+5343254 None:intergenic
AACCCTTGTGAAACCACAGA+AGG 0.649733 2_2:+5346096 None:intergenic
ACCCTTCTTTGGCATCACAA+GGG 0.651646 2_2:-5343330 Msa0233040:CDS
TCAAATGTGGTTGATCACCA+AGG 0.662094 2_2:-5343604 Msa0233040:CDS
ACCCTTCGTTGGTTTCACGA+GGG 0.683138 2_2:-5349589 Msa0233040:CDS
ACCCTCGTGAAACCAACGAA+GGG 0.683239 2_2:+5349588 None:intergenic
TGTAGGAGAAAACTCCAGCA+GGG 0.684933 2_2:-5343566 Msa0233040:CDS
TCAAACGTGGTTGATCACCA+AGG 0.706119 2_2:-5346369 Msa0233040:CDS
TGAAGTTCAGTACTTCTGTG+TGG 0.711031 2_2:+5346022 None:intergenic
ACTTCAATCAAAGTGAGACG+AGG 0.715455 2_2:-5343237 Msa0233040:CDS
AACCCTCGTGAAACCAACGA+AGG 0.725343 2_2:+5349587 None:intergenic
TTATTAGATAACTATCAACA+AGG 0.727793 2_2:+5342489 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATAGAAAATTTAAACA+CGG - chr2_2:5343497-5343516 Msa0233040:CDS 10.0%
!!! TCTTTATATTGTTAATTTTA+TGG + chr2_2:5344144-5344163 None:intergenic 10.0%
!!! AATATAAAGAATTTTGTATT+AGG - chr2_2:5344154-5344173 Msa0233040:intron 10.0%
!!! ATATAAAGAATTTTGTATTA+GGG - chr2_2:5344155-5344174 Msa0233040:intron 10.0%
!! AAATATTTGAACAAAAAAAA+TGG + chr2_2:5345132-5345151 None:intergenic 10.0%
!! TCTTTATATTGTTAAATTTA+TGG + chr2_2:5347632-5347651 None:intergenic 10.0%
!!! TTTTTATTTTTAACTCAATT+AGG + chr2_2:5347710-5347729 None:intergenic 10.0%
!!! TATAATTGTTTTTTATAAAC+GGG + chr2_2:5347783-5347802 None:intergenic 10.0%
!!! GTATAATTGTTTTTTATAAA+CGG + chr2_2:5347784-5347803 None:intergenic 10.0%
!! TAAAAAGACTTGAATATTAT+TGG - chr2_2:5343564-5343583 Msa0233040:CDS 15.0%
!!! TTTGAGATTTATTAATCATA+TGG - chr2_2:5343634-5343653 Msa0233040:CDS 15.0%
!!! TTATTTTTTTACTTTGTCAA+AGG - chr2_2:5343869-5343888 Msa0233040:intron 15.0%
!!! TATTTTTTTACTTTGTCAAA+GGG - chr2_2:5343870-5343889 Msa0233040:intron 15.0%
!! TCAAACAATGTAAAAAAATT+TGG + chr2_2:5344234-5344253 None:intergenic 15.0%
!!! TGTTCTTTTTATTCTATATA+GGG + chr2_2:5344388-5344407 None:intergenic 15.0%
!!! ATGTTCTTTTTATTCTATAT+AGG + chr2_2:5344389-5344408 None:intergenic 15.0%
!!! TCCTTTAATGTTTATTTTAA+TGG - chr2_2:5345048-5345067 Msa0233040:intron 15.0%
!! ACCATTAAAATAAACATTAA+AGG + chr2_2:5345052-5345071 None:intergenic 15.0%
!! ATAGATATAATAAATTGACT+TGG + chr2_2:5345091-5345110 None:intergenic 15.0%
!! GGTTATTATAATTAAGATTA+GGG + chr2_2:5345411-5345430 None:intergenic 15.0%
!! TGGTTATTATAATTAAGATT+AGG + chr2_2:5345412-5345431 None:intergenic 15.0%
!! AATTAGAAATAATACAAGAT+GGG - chr2_2:5346624-5346643 Msa0233040:intron 15.0%
!! ACTTATAAGAATATCTTTAT+TGG - chr2_2:5346943-5346962 Msa0233040:intron 15.0%
!! TGGATAATATGTATTTATAT+AGG - chr2_2:5346963-5346982 Msa0233040:intron 15.0%
!! GACTATTATAACTAAAATTA+GGG + chr2_2:5348264-5348283 None:intergenic 15.0%
!! TGACTATTATAACTAAAATT+AGG + chr2_2:5348265-5348284 None:intergenic 15.0%
!! ACATTAAACAAAATGTTAAA+TGG - chr2_2:5348311-5348330 Msa0233040:intron 15.0%
!! CATTAAACAAAATGTTAAAT+GGG - chr2_2:5348312-5348331 Msa0233040:intron 15.0%
!! ATTTATATCAATTGATCAAA+CGG + chr2_2:5348642-5348661 None:intergenic 15.0%
!! AAATTCAAAATTTGTAATGT+AGG - chr2_2:5348658-5348677 Msa0233040:intron 15.0%
!! AATTCAAAATTTGTAATGTA+GGG - chr2_2:5348659-5348678 Msa0233040:intron 15.0%
!! TTATTGGAAATAAAAGAAGA+TGG - chr2_2:5343135-5343154 Msa0233040:CDS 20.0%
!! TATTGGAAATAAAAGAAGAT+GGG - chr2_2:5343136-5343155 Msa0233040:CDS 20.0%
!!! GTTTTGCTTATATTTAAGTT+TGG - chr2_2:5343427-5343446 Msa0233040:CDS 20.0%
!!! TAATATAAGCTTTTTCTTTG+TGG - chr2_2:5343699-5343718 Msa0233040:CDS 20.0%
!! AATCAATTTAAACATATGCA+CGG + chr2_2:5343847-5343866 None:intergenic 20.0%
!! CTTATACATAAACACTTATT+AGG - chr2_2:5344060-5344079 Msa0233040:intron 20.0%
!!! TTTTTATTTTTAACCCAACT+AGG + chr2_2:5344198-5344217 None:intergenic 20.0%
!! TTTACATTGTTTGAAAATGA+AGG - chr2_2:5344240-5344259 Msa0233040:intron 20.0%
!!! GTTATTTTTTAAACACGTTA+GGG + chr2_2:5344840-5344859 None:intergenic 20.0%
!!! ACATTAAACAAAGTGTTAAA+TGG - chr2_2:5345458-5345477 Msa0233040:intron 20.0%
!! AGTTAAATAAAATGATGAGA+TGG - chr2_2:5345508-5345527 Msa0233040:intron 20.0%
!!! TGTATATGTGCTTTAAATTT+TGG + chr2_2:5345534-5345553 None:intergenic 20.0%
!!! TTCTTACTTTTTTTTTTGAG+AGG - chr2_2:5345711-5345730 Msa0233040:intron 20.0%
!! AAATTGTTATACATATTGCA+TGG - chr2_2:5345783-5345802 Msa0233040:intron 20.0%
!!! TTTGAACTTTTATTATCAGT+TGG + chr2_2:5345888-5345907 None:intergenic 20.0%
!! CAATTAGAAATAATACAAGA+TGG - chr2_2:5346623-5346642 Msa0233040:intron 20.0%
!! AAGCAAAAAATACATTTATC+TGG - chr2_2:5346836-5346855 Msa0233040:intron 20.0%
!! ATTAAAAGACTTGAAATTAC+TGG - chr2_2:5347038-5347057 Msa0233040:intron 20.0%
!!! AGCTCTAAGATATTTTAATA+TGG - chr2_2:5347108-5347127 Msa0233040:intron 20.0%
!! TACTTTGTAATTTCTTGATT+TGG - chr2_2:5347322-5347341 Msa0233040:intron 20.0%
!! AAAAACAAAGAAAATTGACT+TGG + chr2_2:5347933-5347952 None:intergenic 20.0%
!!! TATTTCTTCCATTTCTTTTT+TGG - chr2_2:5347957-5347976 Msa0233040:intron 20.0%
!! ATATTTGACCAAAAAAGAAA+TGG + chr2_2:5347968-5347987 None:intergenic 20.0%
!! ACAATCTATGTAAAATTATG+TGG + chr2_2:5348204-5348223 None:intergenic 20.0%
!! ATTATAACTAAAATTAGGGA+AGG + chr2_2:5348260-5348279 None:intergenic 20.0%
!! ATGTAATAAAGCTGATAATA+CGG - chr2_2:5348855-5348874 Msa0233040:intron 20.0%
!! AATTGGAAATAAAAGAAGAT+GGG - chr2_2:5349395-5349414 Msa0233040:CDS 20.0%
!! ACTTATAAGAAAGTCTTTAT+TGG - chr2_2:5349718-5349737 Msa0233040:CDS 20.0%
!! ATTTATTGAGAAGTTAAACA+CGG - chr2_2:5349750-5349769 Msa0233040:CDS 20.0%
!! TTTCTTGTGATTATGTAATA+AGG - chr2_2:5349915-5349934 Msa0233040:CDS 20.0%
! AACCAATTTGAAAACCTTAT+TGG - chr2_2:5342626-5342645 Msa0233040:intron 25.0%
!! ATCCAATAAGGTTTTCAAAT+TGG + chr2_2:5342631-5342650 None:intergenic 25.0%
! TATGGTACAATATTATGTAG+AGG - chr2_2:5342723-5342742 Msa0233040:intron 25.0%
! ATGGTACAATATTATGTAGA+GGG - chr2_2:5342724-5342743 Msa0233040:intron 25.0%
!! ATGTTACTATTTGGTTTAGA+TGG - chr2_2:5342826-5342845 Msa0233040:intron 25.0%
!! GTCAATTTCGAAACTTTTAT+TGG - chr2_2:5343119-5343138 Msa0233040:CDS 25.0%
!! ATGGATTAAATTGTTTCATG+TGG - chr2_2:5343165-5343184 Msa0233040:CDS 25.0%
! AAGCAAATAGTAAATGTATC+TGG - chr2_2:5343377-5343396 Msa0233040:CDS 25.0%
! GAAAGTCTTTATAGCATTAT+AGG - chr2_2:5343473-5343492 Msa0233040:CDS 25.0%
! TTTCCTTGTGATATCTTATA+AGG - chr2_2:5343667-5343686 Msa0233040:CDS 25.0%
! GAATTAGAAAACTATCAACA+AGG + chr2_2:5343793-5343812 None:intergenic 25.0%
! TTCTTTGTAGTTTCTTGATT+TGG - chr2_2:5343970-5343989 Msa0233040:intron 25.0%
!! TAGAGCTTTGTAATTGATAT+TGG - chr2_2:5343993-5344012 Msa0233040:intron 25.0%
!! AGAGCTTTGTAATTGATATT+GGG - chr2_2:5343994-5344013 Msa0233040:intron 25.0%
! TTGTTAAAAAAACATCTCGT+TGG + chr2_2:5344304-5344323 None:intergenic 25.0%
!! TGTTTTTCATTTTAAGCATC+TGG + chr2_2:5344470-5344489 None:intergenic 25.0%
! TTACTATACTATACCCTTTA+GGG + chr2_2:5344498-5344517 None:intergenic 25.0%
! ACCAAATTGCAAAATAAGAA+AGG - chr2_2:5344591-5344610 Msa0233040:intron 25.0%
!!! ACCTTTCTTATTTTGCAATT+TGG + chr2_2:5344595-5344614 None:intergenic 25.0%
!!! CGTTATTTTTTAAACACGTT+AGG + chr2_2:5344841-5344860 None:intergenic 25.0%
! TTAAGCATTCAACTTAAGAA+AGG + chr2_2:5345158-5345177 None:intergenic 25.0%
! AAAATGTTCCAACAATATTC+TGG + chr2_2:5345367-5345386 None:intergenic 25.0%
! AAAAGCTAGTTCAAATGATA+AGG + chr2_2:5345646-5345665 None:intergenic 25.0%
!!! TATCATTTGAACTAGCTTTT+CGG - chr2_2:5345646-5345665 Msa0233040:intron 25.0%
!! ATTTTCTTCATTCTTACATG+TGG + chr2_2:5346086-5346105 None:intergenic 25.0%
! TATGGTTCAATATTATGTAG+AGG - chr2_2:5346217-5346236 Msa0233040:CDS 25.0%
!!! ATGTTAGAGTTTTGTTTAGA+TGG - chr2_2:5346320-5346339 Msa0233040:CDS 25.0%
! AATACAAGATGGGAAATTTA+TGG - chr2_2:5346634-5346653 Msa0233040:intron 25.0%
! AAGAACTAAACAAAAGTCAA+AGG + chr2_2:5346731-5346750 None:intergenic 25.0%
! AGCTATTATAATTGTTCACA+AGG - chr2_2:5346761-5346780 Msa0233040:intron 25.0%
!!! TGTACGTTTTGCTTTTATTT+AGG - chr2_2:5346900-5346919 Msa0233040:intron 25.0%
! GAATTAGAAAACTATCAACA+AGG + chr2_2:5343793-5343812 None:intergenic 25.0%
!!! TTTGTAATTTCTTGATTTGG+TGG - chr2_2:5347325-5347344 Msa0233040:intron 25.0%
! TTAACAAATGTAAAAACGAG+AGG - chr2_2:5347827-5347846 Msa0233040:intron 25.0%
! TAACAAATGTAAAAACGAGA+GGG - chr2_2:5347828-5347847 Msa0233040:intron 25.0%
!! CTTCTTTTGTCATATCTTAA+TGG - chr2_2:5347890-5347909 Msa0233040:intron 25.0%
! TTAGTCATTCAACTTAAGAA+AGG + chr2_2:5347996-5348015 None:intergenic 25.0%
!!! TACATGATATATTTTTGCGT+GGG + chr2_2:5348027-5348046 None:intergenic 25.0%
!!! ATACATGATATATTTTTGCG+TGG + chr2_2:5348028-5348047 None:intergenic 25.0%
!!! TAGCAGTGTTTTTTTTTCTT+CGG - chr2_2:5348107-5348126 Msa0233040:intron 25.0%
!!! ACTTTCTAAAGTTAACTCAA+AGG - chr2_2:5348352-5348371 Msa0233040:intron 25.0%
! TTGTATATGTGCTTGAAAAA+TGG + chr2_2:5348388-5348407 None:intergenic 25.0%
! TAAACGTTGACAATGTAAAA+TGG - chr2_2:5348420-5348439 Msa0233040:intron 25.0%
! GTTTATTTAACACGATAGAT+TGG - chr2_2:5348491-5348510 Msa0233040:intron 25.0%
! CAAGAGAATTTAATAAGGTT+TGG + chr2_2:5348897-5348916 None:intergenic 25.0%
! TGAAGCAAGAGAATTTAATA+AGG + chr2_2:5348902-5348921 None:intergenic 25.0%
! CAATTGGAAATAAAAGAAGA+TGG - chr2_2:5349394-5349413 Msa0233040:CDS 25.0%
! AAAAGAAGATGGGAAATTTA+TGG - chr2_2:5349405-5349424 Msa0233040:CDS 25.0%
! TTATACCACATGAAACAATT+GGG + chr2_2:5349432-5349451 None:intergenic 25.0%
! ATTATACCACATGAAACAAT+TGG + chr2_2:5349433-5349452 None:intergenic 25.0%
! CTATTCTCAACTGAAATATA+AGG - chr2_2:5349596-5349615 Msa0233040:CDS 25.0%
! TATCTATAGATTCATGTTGA+AGG - chr2_2:5349858-5349877 Msa0233040:CDS 25.0%
! ATCTATAGATTCATGTTGAA+GGG - chr2_2:5349859-5349878 Msa0233040:CDS 25.0%
!! CTAATATAAGATTTGCTTTG+TGG - chr2_2:5349946-5349965 Msa0233040:CDS 25.0%
GATGATACTAATAGAGAAAC+AGG - chr2_2:5342552-5342571 Msa0233040:CDS 30.0%
! GTTATCAGCTTTATCACATA+GGG + chr2_2:5342580-5342599 None:intergenic 30.0%
! TGTTATCAGCTTTATCACAT+AGG + chr2_2:5342581-5342600 None:intergenic 30.0%
!!! GATTTTTTCCTACAATGGTT+TGG + chr2_2:5342692-5342711 None:intergenic 30.0%
TGGTACAATATTATGTAGAG+GGG - chr2_2:5342725-5342744 Msa0233040:intron 30.0%
AAGGACACAATTAGAACAAT+TGG + chr2_2:5342763-5342782 None:intergenic 30.0%
ATAGTAACATCTCTACTCTT+AGG + chr2_2:5342816-5342835 None:intergenic 30.0%
AGAGTAGAGATGTTACTATT+TGG - chr2_2:5342817-5342836 Msa0233040:intron 30.0%
TAAAGTTTAGTACTTCTGTG+TGG + chr2_2:5343013-5343032 None:intergenic 30.0%
ACTTTAATCAAAGTGAGAAG+AGG - chr2_2:5343027-5343046 Msa0233040:intron 30.0%
AAGAACTAACCAAAAGTCAA+AGG + chr2_2:5343243-5343262 None:intergenic 30.0%
GTACATATTTCAGTTGAAGA+TGG + chr2_2:5343339-5343358 None:intergenic 30.0%
TTGCTTATAATTAAGTCGAG+AGG + chr2_2:5343363-5343382 None:intergenic 30.0%
TAAGCAAAACGTACATGTAT+TGG + chr2_2:5343417-5343436 None:intergenic 30.0%
CTTCCTTATAAGATATCACA+AGG + chr2_2:5343673-5343692 None:intergenic 30.0%
TTTACTTTGTCAAAGGGATT+TGG - chr2_2:5343876-5343895 Msa0233040:intron 30.0%
! TGTGCACTTGTAAATTTTCA+TGG - chr2_2:5343927-5343946 Msa0233040:intron 30.0%
TGTTTGAAAATGAAGGTCAA+TGG - chr2_2:5344247-5344266 Msa0233040:intron 30.0%
TAACAAATGACGAAACTTTG+AGG - chr2_2:5344318-5344337 Msa0233040:intron 30.0%
AAAAGAACATAGTACAAGAC+TGG - chr2_2:5344399-5344418 Msa0233040:intron 30.0%
AAAGAACATAGTACAAGACT+GGG - chr2_2:5344400-5344419 Msa0233040:intron 30.0%
!! TAGTTGTATTTTGTTTCCAC+CGG + chr2_2:5344445-5344464 None:intergenic 30.0%
TGAAAAACAAACAACCCTAA+AGG - chr2_2:5344481-5344500 Msa0233040:intron 30.0%
GAAAAACAAACAACCCTAAA+GGG - chr2_2:5344482-5344501 Msa0233040:intron 30.0%
GTTACTATACTATACCCTTT+AGG + chr2_2:5344499-5344518 None:intergenic 30.0%
TTACTCTGAATTGTGATTTG+TGG + chr2_2:5344521-5344540 None:intergenic 30.0%
CAATTCAGAGTAACAAATCT+AGG - chr2_2:5344528-5344547 Msa0233040:intron 30.0%
TTGACAGATGATCAATCAAT+AGG - chr2_2:5344787-5344806 Msa0233040:intron 30.0%
TGACAGATGATCAATCAATA+GGG - chr2_2:5344788-5344807 Msa0233040:intron 30.0%
GCTTACACAAAAACCTAAAA+TGG - chr2_2:5345007-5345026 Msa0233040:intron 30.0%
ACATTAAAGGATCTATCAAG+AGG + chr2_2:5345039-5345058 None:intergenic 30.0%
! CTATGTAGAATTTTGTTGAG+TGG + chr2_2:5345327-5345346 None:intergenic 30.0%
TGAGTTTATCTCTAACTTCT+AGG + chr2_2:5345438-5345457 None:intergenic 30.0%
TCAAATGATAAGGATCTCTA+AGG + chr2_2:5345636-5345655 None:intergenic 30.0%
AAATGTCTTCATTGTCTCTT+TGG + chr2_2:5345969-5345988 None:intergenic 30.0%
! TGTTATTAGCTTCTTTGTTC+TGG - chr2_2:5346006-5346025 Msa0233040:CDS 30.0%
TGAAGCAAGAGAATTCAATA+AGG + chr2_2:5346137-5346156 None:intergenic 30.0%
TTGCTTATATTTAAGTCGAG+AGG + chr2_2:5346822-5346841 None:intergenic 30.0%
ATAGACAAGTTAACTACTTG+CGG - chr2_2:5346866-5346885 Msa0233040:intron 30.0%
!! TTGCTTTTATTTAGGTAGAG+AGG - chr2_2:5346908-5346927 Msa0233040:intron 30.0%
! ACTTATATTAGCTTGGCTTA+AGG + chr2_2:5347147-5347166 None:intergenic 30.0%
GAGCAAAACTTATATTAGCT+TGG + chr2_2:5347154-5347173 None:intergenic 30.0%
! CTAATATAAGTTTTGCTCTG+TGG - chr2_2:5347156-5347175 Msa0233040:intron 30.0%
!! TGGTGGCTTTGTAAATAATA+TGG - chr2_2:5347342-5347361 Msa0233040:intron 30.0%
!! GGTGGCTTTGTAAATAATAT+GGG - chr2_2:5347343-5347362 Msa0233040:intron 30.0%
! TTTTACTCTTTATGCTACAG+AGG + chr2_2:5347408-5347427 None:intergenic 30.0%
TAGCATAAGTAAATAGAAGC+TGG - chr2_2:5347447-5347466 Msa0233040:intron 30.0%
TATGTACTCCATAAACCAAA+AGG - chr2_2:5347654-5347673 Msa0233040:intron 30.0%
AAATGTGTCCATAAACCAAA+AGG - chr2_2:5347727-5347746 Msa0233040:intron 30.0%
ATATGACAAAAGAAGTTGTC+GGG + chr2_2:5347885-5347904 None:intergenic 30.0%
GATATGACAAAAGAAGTTGT+CGG + chr2_2:5347886-5347905 None:intergenic 30.0%
CTATGTAAAATTATGTGGAG+TGG + chr2_2:5348199-5348218 None:intergenic 30.0%
TGAGTTTATCTCTAACTTCT+AGG + chr2_2:5345438-5345457 None:intergenic 30.0%
AAAAGCTAGTTCGAATGATA+AGG + chr2_2:5348456-5348475 None:intergenic 30.0%
AAATGACTTCATAGTCTCTT+TGG + chr2_2:5348737-5348756 None:intergenic 30.0%
! TTTGTTGTAGTCTTTCCAAA+TGG - chr2_2:5348787-5348806 Msa0233040:intron 30.0%
! TATCGAACCTATTTCTCTAT+TGG + chr2_2:5348836-5348855 None:intergenic 30.0%
AAATTCTCTTGCTTCAAATG+TGG - chr2_2:5348906-5348925 Msa0233040:intron 30.0%
AAATGATTGCCCTAAGAATA+GGG - chr2_2:5349062-5349081 Msa0233040:intron 30.0%
! ATGTTACAGTTTGGTTTAGT+TGG - chr2_2:5349085-5349104 Msa0233040:intron 30.0%
AATGTATCTACTCTTCAAAG+TGG - chr2_2:5349471-5349490 Msa0233040:CDS 30.0%
AAGAACTAACCAAAAGTCAA+AGG + chr2_2:5343243-5343262 None:intergenic 30.0%
TGTCTTAGTGAATGTCAAAT+CGG + chr2_2:5349567-5349586 None:intergenic 30.0%
TGTTATCAGCTTCTTTGTCT+TGG - chr2_2:5342500-5342519 Msa0233040:CDS 35.0%
! TTTGTCTTGGTCTTTCCAAA+TGG - chr2_2:5342513-5342532 Msa0233040:CDS 35.0%
CTCTATTAGTATCATCACCA+AGG + chr2_2:5342548-5342567 None:intergenic 35.0%
TGAAGCAAGAGAATCCAATA+AGG + chr2_2:5342643-5342662 None:intergenic 35.0%
!! CAATGGTTTGGTAAAATCCA+TGG + chr2_2:5342680-5342699 None:intergenic 35.0%
! GGATTTTACCAAACCATTGT+AGG - chr2_2:5342681-5342700 Msa0233040:intron 35.0%
!!! GTTCGGATTTTTTCCTACAA+TGG + chr2_2:5342697-5342716 None:intergenic 35.0%
TTGTAGGAAAAAATCCGAAC+AGG - chr2_2:5342697-5342716 Msa0233040:intron 35.0%
AAAAATCCGAACAGGCTTTA+TGG - chr2_2:5342705-5342724 Msa0233040:intron 35.0%
ATTGTACCATAAAGCCTGTT+CGG + chr2_2:5342714-5342733 None:intergenic 35.0%
CTCTTAGGACAATCATTTGA+GGG + chr2_2:5342801-5342820 None:intergenic 35.0%
ACTCTTAGGACAATCATTTG+AGG + chr2_2:5342802-5342821 None:intergenic 35.0%
TATTCAAACGAGAGCTTCTT+CGG - chr2_2:5342861-5342880 Msa0233040:intron 35.0%
AATCAAAGTGAGAAGAGGTA+TGG - chr2_2:5343032-5343051 Msa0233040:intron 35.0%
AAAAGAAGATGGGAAGTTCA+TGG - chr2_2:5343146-5343165 Msa0233040:CDS 35.0%
AATGTTTCCACTCTTCTAAG+TGG - chr2_2:5343212-5343231 Msa0233040:CDS 35.0%
TTGGTTTCTTGACAGATGAT+TGG - chr2_2:5343895-5343914 Msa0233040:intron 35.0%
AAAAACATCTCGTTGGATTG+AGG + chr2_2:5344297-5344316 None:intergenic 35.0%
AAGAACATAGTACAAGACTG+GGG - chr2_2:5344401-5344420 Msa0233040:intron 35.0%
!! AGTTGTATTTTGTTTCCACC+GGG + chr2_2:5344444-5344463 None:intergenic 35.0%
!!! AGTGTTGATTTTGCTGGAAA+TGG + chr2_2:5344737-5344756 None:intergenic 35.0%
TTCCAGCAAAATCAACACTA+AGG - chr2_2:5344738-5344757 Msa0233040:intron 35.0%
!! TCGAGATATCAATTGGCTTT+GGG + chr2_2:5344767-5344786 None:intergenic 35.0%
! ATCGAGATATCAATTGGCTT+TGG + chr2_2:5344768-5344787 None:intergenic 35.0%
CTGTCAATCGAGATATCAAT+TGG + chr2_2:5344774-5344793 None:intergenic 35.0%
GTGCTAGCAACAATCAATTT+GGG + chr2_2:5344960-5344979 None:intergenic 35.0%
AAAACAGCTGAAAGTAACGA+TGG + chr2_2:5345244-5345263 None:intergenic 35.0%
CAAGTAAGCCAGAATATTGT+TGG - chr2_2:5345356-5345375 Msa0233040:intron 35.0%
! ATTTTCTCCCAACTCATTTG+AGG - chr2_2:5345382-5345401 Msa0233040:intron 35.0%
!! TATCTCTAACTTCTAGGACT+TGG + chr2_2:5345432-5345451 None:intergenic 35.0%
ATCACACATTCTCAAAACGT+TGG - chr2_2:5345555-5345574 Msa0233040:intron 35.0%
AGTGTGCAAAATCAACTCTT+GGG + chr2_2:5345815-5345834 None:intergenic 35.0%
AAGTGTGCAAAATCAACTCT+TGG + chr2_2:5345816-5345835 None:intergenic 35.0%
! TTTGTTCTGGTCTTTCCAAA+TGG - chr2_2:5346019-5346038 Msa0233040:CDS 35.0%
!!! GTCTTTCCAAATGGCTTTTT+TGG - chr2_2:5342522-5342541 Msa0233040:CDS 35.0%
CTCTATTAGTATCATCTGCA+AGG + chr2_2:5346054-5346073 None:intergenic 35.0%
!! CAATGGTTTGGTAAAATCCT+TGG + chr2_2:5346174-5346193 None:intergenic 35.0%
TATTGAACCATAAATCCTGC+TGG + chr2_2:5346209-5346228 None:intergenic 35.0%
! AACATTTGAAGCAACTCTTG+CGG + chr2_2:5346284-5346303 None:intergenic 35.0%
ACTCTAACATCTCTACACTT+AGG + chr2_2:5346310-5346329 None:intergenic 35.0%
TATTCAAACGAGAGCTTCTT+TGG - chr2_2:5342861-5342880 Msa0233040:intron 35.0%
! TGATATTGATGATCCTTCTG+TGG - chr2_2:5346414-5346433 Msa0233040:CDS 35.0%
ACTTCAATCAAAGTGAGAAG+AGG - chr2_2:5346518-5346537 Msa0233040:intron 35.0%
AATCAAAGTGAGAAGAGGTA+TGG - chr2_2:5343032-5343051 Msa0233040:intron 35.0%
CACAAGAGATATCAGTAGAA+AGG - chr2_2:5346558-5346577 Msa0233040:intron 35.0%
ATCATACCACATGAAACAAC+TGG + chr2_2:5346662-5346681 None:intergenic 35.0%
AATGTATCCTTTCTTCCAAG+TGG - chr2_2:5346700-5346719 Msa0233040:intron 35.0%
!!! ATGCTGAACCTTTTGGTTTA+TGG + chr2_2:5347665-5347684 None:intergenic 35.0%
AAACCAAAAGGTTCAGCATT+AGG - chr2_2:5347666-5347685 Msa0233040:intron 35.0%
! TTACCTAATGCTGAACCTTT+TGG + chr2_2:5347672-5347691 None:intergenic 35.0%
!!! ATGCTGAACCTTTTGGTTTA+TGG + chr2_2:5347665-5347684 None:intergenic 35.0%
! TCAGCATTGCTTGAGATTTT+AGG - chr2_2:5347751-5347770 Msa0233040:intron 35.0%
GTTTACATACAAACCCATAG+CGG - chr2_2:5347850-5347869 Msa0233040:intron 35.0%
TCGAATGATAAGGATCTTCA+AGG + chr2_2:5348446-5348465 None:intergenic 35.0%
TATGAGCAAAGTCAACTCTT+GGG + chr2_2:5348586-5348605 None:intergenic 35.0%
TTATGAGCAAAGTCAACTCT+TGG + chr2_2:5348587-5348606 None:intergenic 35.0%
!!! GTCTTTCCAAATGGCTTTTT+TGG - chr2_2:5342522-5342541 Msa0233040:CDS 35.0%
GATGACACCAATAGAGAAAT+AGG - chr2_2:5348826-5348845 Msa0233040:intron 35.0%
CAAATGATTGCCCTAAGAAT+AGG - chr2_2:5349061-5349080 Msa0233040:intron 35.0%
CTGTAACATCCCTATTCTTA+GGG + chr2_2:5349074-5349093 None:intergenic 35.0%
ACTGTAACATCCCTATTCTT+AGG + chr2_2:5349075-5349094 None:intergenic 35.0%
AGAATAGGGATGTTACAGTT+TGG - chr2_2:5349076-5349095 Msa0233040:intron 35.0%
AATTTCTTCAGAGACATGCA+TGG - chr2_2:5349132-5349151 Msa0233040:intron 35.0%
!! TGAAGTTTAGTTCTTCTGTG+TGG + chr2_2:5349272-5349291 None:intergenic 35.0%
CACAAGAGATATCAATAGAC+AGG - chr2_2:5349326-5349345 Msa0233040:CDS 35.0%
AAGTAACCAGTTGATCATCA+AGG + chr2_2:5349365-5349384 None:intergenic 35.0%
! GTTACTTTCAGAGCTACAAT+TGG - chr2_2:5349378-5349397 Msa0233040:CDS 35.0%
AGTGAATGTCAAATCGGTAT+AGG + chr2_2:5349561-5349580 None:intergenic 35.0%
TATTGAGAAGTTAAACACGG+AGG - chr2_2:5349753-5349772 Msa0233040:CDS 35.0%
! AGGGTACTCTTGTAGAGTTA+AGG + chr2_2:5342782-5342801 None:intergenic 40.0%
AGCTCTCGTTTGAATAGTGT+AGG + chr2_2:5342857-5342876 None:intergenic 40.0%
! AAGTGAGAAGAGGTATGGTA+TGG - chr2_2:5343037-5343056 Msa0233040:intron 40.0%
CACAAGAGATATCAGTAGAG+AGG - chr2_2:5343067-5343086 Msa0233040:CDS 40.0%
! AAGGTGTTTGGATGCTCAAT+TGG - chr2_2:5343097-5343116 Msa0233040:CDS 40.0%
CTAGTGAGTCTCAAATTGGT+AGG + chr2_2:5343303-5343322 None:intergenic 40.0%
! CTACCAATTTGAGACTCACT+AGG - chr2_2:5343301-5343320 Msa0233040:CDS 40.0%
TGTCCTAGTGAGTCTCAAAT+TGG + chr2_2:5343307-5343326 None:intergenic 40.0%
TCCTGCAGAAGTTTACTAAG+TGG - chr2_2:5343744-5343763 Msa0233040:intron 40.0%
ACTAAGTGGCATAACTGTTG+CGG - chr2_2:5343758-5343777 Msa0233040:intron 40.0%
ACATCTCAATGCAACCTAGT+TGG - chr2_2:5344181-5344200 Msa0233040:intron 40.0%
CATCTCAATGCAACCTAGTT+GGG - chr2_2:5344182-5344201 Msa0233040:intron 40.0%
AGAACATAGTACAAGACTGG+GGG - chr2_2:5344402-5344421 Msa0233040:intron 40.0%
!! TATTTTGTTTCCACCGGGTA+AGG + chr2_2:5344439-5344458 None:intergenic 40.0%
CTTTGTGAAGATCTCGATTC+AGG + chr2_2:5344634-5344653 None:intergenic 40.0%
CTGAATCGAGATCTTCACAA+AGG - chr2_2:5344632-5344651 Msa0233040:intron 40.0%
!! GTTGGGTTTTGTATCTGTGT+TGG + chr2_2:5344673-5344692 None:intergenic 40.0%
!!! TGCCTTAGTGTTGATTTTGC+TGG + chr2_2:5344743-5344762 None:intergenic 40.0%
AGGGTCTGTTATTGTGTTTG+TGG + chr2_2:5344821-5344840 None:intergenic 40.0%
!!! TCTGGCTTTTGATTGGTTCT+GGG + chr2_2:5344871-5344890 None:intergenic 40.0%
!!! ATCTGGCTTTTGATTGGTTC+TGG + chr2_2:5344872-5344891 None:intergenic 40.0%
CTAGTTTGGTTATGTACTCG+TGG + chr2_2:5344925-5344944 None:intergenic 40.0%
CAATCAATTTGGGCTTCGAT+TGG + chr2_2:5344950-5344969 None:intergenic 40.0%
GGTGCTAGCAACAATCAATT+TGG + chr2_2:5344961-5344980 None:intergenic 40.0%
!!! CAAGAGGCATTGTCCATTTT+AGG + chr2_2:5345023-5345042 None:intergenic 40.0%
ACTCTCCAACGCAACTTAAA+TGG - chr2_2:5345610-5345629 Msa0233040:intron 40.0%
!! TAAGGCCATTTAAGTTGCGT+TGG + chr2_2:5345618-5345637 None:intergenic 40.0%
GAATTCTCTTGCTTCAAACG+TGG - chr2_2:5346141-5346160 Msa0233040:CDS 40.0%
! GGATTTTACCAAACCATTGC+AGG - chr2_2:5346175-5346194 Msa0233040:CDS 40.0%
! AGTTTTCTCCTGCAATGGTT+TGG + chr2_2:5346186-5346205 None:intergenic 40.0%
GAAAACTCCAGCAGGATTTA+TGG - chr2_2:5346199-5346218 Msa0233040:CDS 40.0%
ATCCTTCTGTGGTTTCACAA+GGG - chr2_2:5346425-5346444 Msa0233040:CDS 40.0%
TGAAGTTCAGTACTTCTGTG+TGG + chr2_2:5346504-5346523 None:intergenic 40.0%
! AAGTGAGAAGAGGTATGGAA+TGG - chr2_2:5346528-5346547 Msa0233040:intron 40.0%
TCAGTAGAAAGGACTGCAAA+AGG - chr2_2:5346569-5346588 Msa0233040:intron 40.0%
! ATGGATCCAGTTGTTTCATG+TGG - chr2_2:5346653-5346672 Msa0233040:intron 40.0%
! AGGAGTGCATATTTCAGTTG+AGG + chr2_2:5346802-5346821 None:intergenic 40.0%
GTGCACTTGCAAATTTGTCA+TGG - chr2_2:5347282-5347301 Msa0233040:intron 40.0%
GAATGTTACCTGTGTCTTTG+CGG - chr2_2:5347365-5347384 Msa0233040:intron 40.0%
! CATTTTTACCGCAAAGACAC+AGG + chr2_2:5347376-5347395 None:intergenic 40.0%
CTGTGTCTTTGCGGTAAAAA+TGG - chr2_2:5347374-5347393 Msa0233040:intron 40.0%
GACTGTCAACTTTACATGAG+CGG - chr2_2:5347586-5347605 Msa0233040:intron 40.0%
! TCAAGCAATGCTGAACCTTT+TGG + chr2_2:5347745-5347764 None:intergenic 40.0%
TGATTCGTTCATCGATCGTT+TGG - chr2_2:5348142-5348161 Msa0233040:intron 40.0%
CAAGAAGTAAGCCAGAACTT+TGG - chr2_2:5348225-5348244 Msa0233040:intron 40.0%
GCAATGCCAAAAAAGCCATT+TGG + chr2_2:5348805-5348824 None:intergenic 40.0%
TCAAATGTGGTTGATCACCA+AGG - chr2_2:5348919-5348938 Msa0233040:intron 40.0%
!! CAGTGGTTTGGTAAAATCCT+TGG + chr2_2:5348939-5348958 None:intergenic 40.0%
! GGATTTTACCAAACCACTGT+AGG - chr2_2:5348940-5348959 Msa0233040:intron 40.0%
! AGTTTTCTCCTACAGTGGTT+TGG + chr2_2:5348951-5348970 None:intergenic 40.0%
TATTGAACCATAAACCCTGC+TGG + chr2_2:5348974-5348993 None:intergenic 40.0%
AATTCTCGTCAGAATAGCGT+AGG + chr2_2:5349116-5349135 None:intergenic 40.0%
!! TGATGTTGATGACCCTTCTT+TGG - chr2_2:5349182-5349201 Msa0233040:intron 40.0%
ACTTCAATCAAAGTGAGACG+AGG - chr2_2:5349286-5349305 Msa0233040:intron 40.0%
AATCAAAGTGAGACGAGGTA+TGG - chr2_2:5349291-5349310 Msa0233040:intron 40.0%
ATCAAAGTGAGACGAGGTAT+GGG - chr2_2:5349292-5349311 Msa0233040:intron 40.0%
ATGGACCCAATTGTTTCATG+TGG - chr2_2:5349424-5349443 Msa0233040:CDS 40.0%
! CCATGTAACTTGTCTAAACG+TGG + chr2_2:5349642-5349661 None:intergenic 40.0%
CCACGTTTAGACAAGTTACA+TGG - chr2_2:5349639-5349658 Msa0233040:CDS 40.0%
CTGCGTTTATTTAAGTCGAG+AGG - chr2_2:5349683-5349702 Msa0233040:CDS 40.0%
ACTAAGCTTCTGCAAGAAGA+AGG + chr2_2:5349994-5350013 None:intergenic 40.0%
CCAAGGCAGAAAAAGCCATT+TGG + chr2_2:5342531-5342550 None:intergenic 45.0%
!! CCAAATGGCTTTTTCTGCCT+TGG - chr2_2:5342528-5342547 Msa0233040:CDS 45.0%
!! TCAAACGTCGTTGATAGCCA+TGG - chr2_2:5342660-5342679 Msa0233040:intron 45.0%
TGATATTGACGACCCTTCGT+TGG - chr2_2:5342923-5342942 Msa0233040:intron 45.0%
!! GTGGTGAGTCCTTTGACTTT+TGG - chr2_2:5343231-5343250 Msa0233040:CDS 45.0%
ATGTATCTGGTCCACACGTT+TGG - chr2_2:5343390-5343409 Msa0233040:CDS 45.0%
! CATGTATTGGTCCAAACGTG+TGG + chr2_2:5343404-5343423 None:intergenic 45.0%
TTCTTTGTGGTACAGCTGCT+TGG - chr2_2:5343712-5343731 Msa0233040:CDS 45.0%
GCCACTTAGTAAACTTCTGC+AGG + chr2_2:5343748-5343767 None:intergenic 45.0%
GATTGCCAACTTTACATGCG+CGG - chr2_2:5344097-5344116 Msa0233040:intron 45.0%
ATTGCCAACTTTACATGCGC+GGG - chr2_2:5344098-5344117 Msa0233040:intron 45.0%
GGAGACATAAAAGCCTTACC+CGG - chr2_2:5344423-5344442 Msa0233040:intron 45.0%
!! TTTTGTATCTGTGTTGGCGG+TGG + chr2_2:5344667-5344686 None:intergenic 45.0%
!! GGGTTTTGTATCTGTGTTGG+CGG + chr2_2:5344670-5344689 None:intergenic 45.0%
ACCAATCAAAAGCCAGATCG+AGG - chr2_2:5344874-5344893 Msa0233040:intron 45.0%
CCAATCAAAAGCCAGATCGA+GGG - chr2_2:5344875-5344894 Msa0233040:intron 45.0%
GTTATGTACTCGTGGTACTC+AGG + chr2_2:5344917-5344936 None:intergenic 45.0%
!! CGGTTTGGTTGATGGTAGTT+TGG + chr2_2:5344982-5345001 None:intergenic 45.0%
TACCATCAACCAAACCGTGA+GGG - chr2_2:5344985-5345004 Msa0233040:intron 45.0%
! GGTTTTTGTGTAAGCCCTCA+CGG + chr2_2:5345002-5345021 None:intergenic 45.0%
AGGGAAGCCTCAAATGAGTT+GGG + chr2_2:5345392-5345411 None:intergenic 45.0%
TAGGGAAGCCTCAAATGAGT+TGG + chr2_2:5345393-5345412 None:intergenic 45.0%
GCAAGGCCAAAAAAGCCATT+TGG + chr2_2:5346037-5346056 None:intergenic 45.0%
TCAAACGTGGTTGATCACCA+AGG - chr2_2:5346154-5346173 Msa0233040:CDS 45.0%
AAGCAACTCTTGCGGAGTTA+AGG + chr2_2:5346276-5346295 None:intergenic 45.0%
AGCTCTCGTTTGAATAGCGT+AGG + chr2_2:5346351-5346370 None:intergenic 45.0%
GATCCTTCTGTGGTTTCACA+AGG - chr2_2:5346424-5346443 Msa0233040:CDS 45.0%
AACCCTTGTGAAACCACAGA+AGG + chr2_2:5346430-5346449 None:intergenic 45.0%
CAAGGGTTACCTTTCATGAG+TGG - chr2_2:5346442-5346461 Msa0233040:CDS 45.0%
!! AAAGGACTGCAAAAGGTGTC+TGG - chr2_2:5346576-5346595 Msa0233040:intron 45.0%
AAGTCAAAGGACTCACCACT+TGG + chr2_2:5343230-5343249 None:intergenic 45.0%
GCTAAGCTTCTGCAAGAAGA+AGG + chr2_2:5347198-5347217 None:intergenic 45.0%
TGACAAAAGAAGTTGTCGGG+AGG + chr2_2:5347882-5347901 None:intergenic 45.0%
GGCTCAAATGACCAAAGTTC+TGG + chr2_2:5348239-5348258 None:intergenic 45.0%
GCAGAATAGCAGAAGAGAAG+AGG + chr2_2:5348710-5348729 None:intergenic 45.0%
TGTAGGAGAAAACTCCAGCA+GGG - chr2_2:5348957-5348976 Msa0233040:intron 45.0%
GAAAACTCCAGCAGGGTTTA+TGG - chr2_2:5348964-5348983 Msa0233040:intron 45.0%
ACCCTTCTTTGGCATCACAA+GGG - chr2_2:5349193-5349212 Msa0233040:intron 45.0%
ACCCTTGTGATGCCAAAGAA+GGG + chr2_2:5349197-5349216 None:intergenic 45.0%
AACCCTTGTGATGCCAAAGA+AGG + chr2_2:5349198-5349217 None:intergenic 45.0%
CAAGGGTTACCTTTCATGAG+TGG - chr2_2:5346442-5346461 Msa0233040:CDS 45.0%
TCAATAGACAGGACTGCAGA+AGG - chr2_2:5349337-5349356 Msa0233040:CDS 45.0%
! AAGGTGCCTTGATGATCAAC+TGG - chr2_2:5349356-5349375 Msa0233040:CDS 45.0%
!! GTGGTGAGTCCTTTGACTTT+TGG - chr2_2:5343231-5343250 Msa0233040:CDS 45.0%
! ACGCAGAAAGTACGTGTATC+TGG + chr2_2:5349669-5349688 None:intergenic 45.0%
TGCTTTGTGGTACAGTTGCT+TGG - chr2_2:5349959-5349978 Msa0233040:CDS 45.0%
CAGAAGCTTAGTAGCAGTTG+CGG - chr2_2:5350002-5350021 Msa0233040:CDS 45.0%
CTTAGTAGCAGTTGCGGTTT+CGG - chr2_2:5350008-5350027 Msa0233040:CDS 45.0%
!!! TCTTATTTTTTTAAAATAAA+TGG - chr2_2:5344341-5344360 Msa0233040:intron 5.0%
AGCTTCTTCGGAGAGATGCA+AGG - chr2_2:5342873-5342892 Msa0233040:intron 50.0%
!! ACCCTTCGTTGGTTTCACGA+GGG - chr2_2:5342934-5342953 Msa0233040:intron 50.0%
ACCCTCGTGAAACCAACGAA+GGG + chr2_2:5342938-5342957 None:intergenic 50.0%
AACCCTCGTGAAACCAACGA+AGG + chr2_2:5342939-5342958 None:intergenic 50.0%
TCAGTAGAGAGGACTGCAGA+AGG - chr2_2:5343078-5343097 Msa0233040:CDS 50.0%
!! AGAGGACTGCAGAAGGTGTT+TGG - chr2_2:5343085-5343104 Msa0233040:CDS 50.0%
GGACTCACCACTTAGAAGAG+TGG + chr2_2:5343222-5343241 None:intergenic 50.0%
TTTGTGGTACAGCTGCTTGG+AGG - chr2_2:5343715-5343734 Msa0233040:CDS 50.0%
GACATAAAAGCCTTACCCGG+TGG - chr2_2:5344426-5344445 Msa0233040:intron 50.0%
GGGCTCGCTTGATTGTACAT+TGG + chr2_2:5344556-5344575 None:intergenic 50.0%
GCTTAGCATCGCAACGCATT+GGG + chr2_2:5344704-5344723 None:intergenic 50.0%
TGCTTAGCATCGCAACGCAT+TGG + chr2_2:5344705-5344724 None:intergenic 50.0%
!!! CCCTCGATCTGGCTTTTGAT+TGG + chr2_2:5344878-5344897 None:intergenic 50.0%
TGATTGATCGTCCCTCGATC+TGG + chr2_2:5344889-5344908 None:intergenic 50.0%
!! GGCTTCGATTGGTGCTAGTT+TGG + chr2_2:5344939-5344958 None:intergenic 50.0%
CTACCATCAACCAAACCGTG+AGG - chr2_2:5344984-5345003 Msa0233040:intron 50.0%
TTGTGTAAGCCCTCACGGTT+TGG + chr2_2:5344997-5345016 None:intergenic 50.0%
! GCTGGAGTTTTCTCCTGCAA+TGG + chr2_2:5346191-5346210 None:intergenic 50.0%
TTGCAGGAGAAAACTCCAGC+AGG - chr2_2:5346191-5346210 Msa0233040:CDS 50.0%
! GAGCTTCTTTGGAGACATGC+AGG - chr2_2:5346366-5346385 Msa0233040:CDS 50.0%
GCTGCTACTCCACTCATGAA+AGG + chr2_2:5346454-5346473 None:intergenic 50.0%
GGACTCACCACTTGGAAGAA+AGG + chr2_2:5346710-5346729 None:intergenic 50.0%
CAGAAGCTTAGCAGCGATTG+CGG - chr2_2:5347206-5347225 Msa0233040:intron 50.0%
! GCTGGAGTTTTCTCCTACAG+TGG + chr2_2:5348956-5348975 None:intergenic 50.0%
CTGTAGGAGAAAACTCCAGC+AGG - chr2_2:5348956-5348975 Msa0233040:intron 50.0%
GACCCTTCTTTGGCATCACA+AGG - chr2_2:5349192-5349211 Msa0233040:intron 50.0%
GCTGCTACTCCACTCATGAA+AGG + chr2_2:5346454-5346473 None:intergenic 50.0%
AAGTGAGACGAGGTATGGGA+TGG - chr2_2:5349296-5349315 Msa0233040:CDS 50.0%
GTGGTACAGTTGCTTGGACT+TGG - chr2_2:5349965-5349984 Msa0233040:CDS 50.0%
!! GACCCTTCGTTGGTTTCACG+AGG - chr2_2:5342933-5342952 Msa0233040:intron 55.0%
CGAGGGTTACCCTTCATGAG+CGG - chr2_2:5342951-5342970 Msa0233040:intron 55.0%
GCTGCTACTCCGCTCATGAA+GGG + chr2_2:5342963-5342982 None:intergenic 55.0%
AGCTGCTACTCCGCTCATGA+AGG + chr2_2:5342964-5342983 None:intergenic 55.0%
GTGACCCGCGCATGTAAAGT+TGG + chr2_2:5344105-5344124 None:intergenic 55.0%
! TTTGGTTTCGAGCTCGTGCG+CGG + chr2_2:5344577-5344596 None:intergenic 55.0%
!! AGCCCTCACGGTTTGGTTGA+TGG + chr2_2:5344990-5345009 None:intergenic 55.0%
TGCTCTGTGGTACAGCTGCA+TGG - chr2_2:5347169-5347188 Msa0233040:intron 55.0%
TCTGTGGTACAGCTGCATGG+AGG - chr2_2:5347172-5347191 Msa0233040:intron 55.0%
CTTAGCAGCGATTGCGGTCT+CGG - chr2_2:5347212-5347231 Msa0233040:intron 55.0%
!! CGGGAGGTTTTGTCCGCTAT+GGG + chr2_2:5347866-5347885 None:intergenic 55.0%
!! TCGGGAGGTTTTGTCCGCTA+TGG + chr2_2:5347867-5347886 None:intergenic 55.0%
TGGAGTAGCAGCTGCAGCTT+CGG - chr2_2:5349230-5349249 Msa0233040:intron 55.0%
TTGGTTTCGAGCTCGTGCGC+GGG + chr2_2:5344576-5344595 None:intergenic 60.0%
! CGCATTGGGTTGCACGCGTT+GGG + chr2_2:5344690-5344709 None:intergenic 60.0%
! ACGCATTGGGTTGCACGCGT+TGG + chr2_2:5344691-5344710 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 5342492 5350053 5342492 ID=Msa0233040;Name=Msa0233040
chr2_2 mRNA 5342492 5350053 5342492 ID=Msa0233040-mRNA-1;Parent=Msa0233040;Name=Msa0233040-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|1|1|4|0|747
chr2_2 exon 5349293 5350053 5349293 ID=Msa0233040-mRNA-1:exon:2329;Parent=Msa0233040-mRNA-1
chr2_2 exon 5345824 5346530 5345824 ID=Msa0233040-mRNA-1:exon:2328;Parent=Msa0233040-mRNA-1
chr2_2 exon 5343053 5343748 5343053 ID=Msa0233040-mRNA-1:exon:2327;Parent=Msa0233040-mRNA-1
chr2_2 exon 5342492 5342571 5342492 ID=Msa0233040-mRNA-1:exon:2326;Parent=Msa0233040-mRNA-1
chr2_2 CDS 5349293 5350053 5349293 ID=Msa0233040-mRNA-1:cds;Parent=Msa0233040-mRNA-1
chr2_2 CDS 5345824 5346530 5345824 ID=Msa0233040-mRNA-1:cds;Parent=Msa0233040-mRNA-1
chr2_2 CDS 5343053 5343748 5343053 ID=Msa0233040-mRNA-1:cds;Parent=Msa0233040-mRNA-1
chr2_2 CDS 5342492 5342571 5342492 ID=Msa0233040-mRNA-1:cds;Parent=Msa0233040-mRNA-1
Gene Sequence

>Msa0233040

ATGCTATGTGTTATCAGCTTCTTTGTCTTGGTCTTTCCAAATGGCTTTTTCTGCCTTGGTGATGATACTAATAGAGAAACAGGTACCCTATGTGATAAAGCTGATAACAATCATGTCGATGAAGATACATTTCAAACCAATTTGAAAACCTTATTGGATTCTCTTGCTTCAAACGTCGTTGATAGCCATGGATTTTACCAAACCATTGTAGGAAAAAATCCGAACAGGCTTTATGGTACAATATTATGTAGAGGGGACATATCTGCTACCAATTGTTCTAATTGTGTCCTTAACTCTACAAGAGTACCCTCAAATGATTGTCCTAAGAGTAGAGATGTTACTATTTGGTTTAGATGGTGTTTCCTACACTATTCAAACGAGAGCTTCTTCGGAGAGATGCAAGGAACAGCAACTGCAATCACAAATGACAGTGATATTGACGACCCTTCGTTGGTTTCACGAGGGTTACCCTTCATGAGCGGAGTAGCAGCTGCAGCATCAGAGAAATCATTCATGTTCCACACAGAAGTACTAAACTTTAATCAAAGTGAGAAGAGGTATGGTATGGCTCAGTGCACAAGAGATATCAGTAGAGAGGACTGCAGAAGGTGTTTGGATGCTCAATTGGTCAATTTCGAAACTTTTATTGGAAATAAAAGAAGATGGGAAGTTCATGGATTAAATTGTTTCATGTGGTATGATGACTATCAATTTTATTCTAATGTTTCCACTCTTCTAAGTGGTGAGTCCTTTGACTTTTGCTTCTTTGTTCTGGTCTTTCCAAATGGCTTTTTTGGCCTTGCAGATGATACTAATAGAGAATTAAGTTCCACATGTAAGAATGAAGAAAATACTACTGTCAATGAAAACATATTGCAAACCTTATTGAATTCTCTTGCTTCAAACGTGGTTGATCACCAAGGATTTTACCAAACCATTGCAGGAGAAAACTCCAGCAGGATTTATGGTTCAATATTATGTAGAGGAGACATATCTGCTAACAATTGTTCTGATTGTGTCCTTAACTCCGCAAGAGTTGCTTCAAATGTTTTTCCTAAGTGTAGAGATGTTAGAGTTTTGTTTAGATGGTGTTTCCTACGCTATTCAAACGAGAGCTTCTTTGGAGACATGCAGGAAACAACAACTGCATATGACTTTGATGATATTGATGATCCTTCTGTGGTTTCACAAGGGTTACCTTTCATGAGTGGAGTAGCAGCTACAGCTTCAGAGAAATCATTAATGTTCCACACAGAAGTACTGAACTTCAATCAAAGTGAGAAGAGGTATGGAATGGCTCAGTGCACAAGAGATATCAGTAGAAAGGACTGCAAAAGGTGTCTGGATTCTCAGCTGATTAATCACAGAACAATTAGAAATAATACAAGATGGGAAATTTATGGATCCAGTTGTTTCATGTGGTATGATGACTATCAGTTTTATGCTAATGTATCCTTTCTTCCAAGTGTCTTTCCAAATGGCTTTTTTGGCATTGCTGATGACACCAATAGAGAAATAGGTTCGATATGTAATAAAGCTGATAATACGGTCAATGAAGACATATTCCAAACCTTATTAAATTCTCTTGCTTCAAATGTGGTTGATCACCAAGGATTTTACCAAACCACTGTAGGAGAAAACTCCAGCAGGGTTTATGGTTCAATATTATGTAGACGAGACATATCTGCTAACAATTGTTCTGTTTGTGCTCTTAACTCTACAAGAGTAGCTTCAAATGATTGCCCTAAGAATAGGGATGTTACAGTTTGGTTTAGTTGGTGTTTCCTACGCTATTCTGACGAGAATTTCTTCAGAGACATGCATGGAATAACAAATGCATTCACAAATGACACTGATGTTGATGACCCTTCTTTGGCATCACAAGGGTTACCTTTCATGAGTGGAGTAGCAGCTGCAGCTTCGGAGAACTCATTCATGTTCCACACAGAAGAACTAAACTTCAATCAAAGTGAGACGAGGTATGGGATGGCTCAGTGCACAAGAGATATCAATAGACAGGACTGCAGAAGGTGCCTTGATGATCAACTGGTTACTTTCAGAGCTACAATTGGAAATAAAAGAAGATGGGAAATTTATGGACCCAATTGTTTCATGTGGTATAATGACTATCAATTTTATGCTAATGTATCTACTCTTCAAAGTGTTGCTTGGACTTGGAAGCCTTCTTCTTGCAGAAGCTTAGTAGCAGTTGCGGTTTCGGTAGCCTTGTTGATAGTTATCTAA
Protein sequence

>Msa0233040

MLCVISFFVLVFPNGFFCLGDDTNRETGTLCDKADNNHVDEDTFQTNLKTLLDSLASNVVDSHGFYQTIVGKNPNRLYGTILCRGDISATNCSNCVLNSTRVPSNDCPKSRDVTIWFRWCFLHYSNESFFGEMQGTATAITNDSDIDDPSLVSRGLPFMSGVAAAASEKSFMFHTEVLNFNQSEKRYGMAQCTRDISREDCRRCLDAQLVNFETFIGNKRRWEVHGLNCFMWYDDYQFYSNVSTLLSGESFDFCFFVLVFPNGFFGLADDTNRELSSTCKNEENTTVNENILQTLLNSLASNVVDHQGFYQTIAGENSSRIYGSILCRGDISANNCSDCVLNSARVASNVFPKCRDVRVLFRWCFLRYSNESFFGDMQETTTAYDFDDIDDPSVVSQGLPFMSGVAATASEKSLMFHTEVLNFNQSEKRYGMAQCTRDISRKDCKRCLDSQLINHRTIRNNTRWEIYGSSCFMWYDDYQFYANVSFLPSVFPNGFFGIADDTNREIGSICNKADNTVNEDIFQTLLNSLASNVVDHQGFYQTTVGENSSRVYGSILCRRDISANNCSVCALNSTRVASNDCPKNRDVTVWFSWCFLRYSDENFFRDMHGITNAFTNDTDVDDPSLASQGLPFMSGVAAAASENSFMFHTEELNFNQSETRYGMAQCTRDINRQDCRRCLDDQLVTFRATIGNKRRWEIYGPNCFMWYNDYQFYANVSTLQSVAWTWKPSSCRSLVAVAVSVALLIVI*