AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1115980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1115980 MtrunA17_Chr7g0258321 96.162 469 4 5 1 460 1 464 0.0 916
Msa1115980 MtrunA17_Chr1g0174701 72.912 443 90 9 47 460 66 507 0.0 625
Msa1115980 MtrunA17_Chr8g0353501 51.813 386 154 10 87 458 98 465 2.19e-122 364
Msa1115980 MtrunA17_Chr7g0256211 60.131 306 103 7 164 459 156 452 5.57e-122 363
Msa1115980 MtrunA17_Chr2g0321431 55.593 295 111 4 171 459 189 469 1.43e-110 335
Msa1115980 MtrunA17_Chr4g0026401 53.746 307 115 6 159 459 176 461 1.16e-104 320
Msa1115980 MtrunA17_Chr5g0422771 50.809 309 136 5 160 459 163 464 4.34e-100 307
Msa1115980 MtrunA17_Chr3g0124601 49.057 318 149 4 148 459 51 361 5.06e-98 298
Msa1115980 MtrunA17_Chr1g0210151 48.598 321 147 6 146 459 31 340 7.98e-96 292
Msa1115980 MtrunA17_Chr8g0382861 44.918 305 156 3 160 459 59 356 5.25e-83 259
Msa1115980 MtrunA17_Chr5g0424861 44.315 343 169 7 122 456 19 347 2.52e-82 258
Msa1115980 MtrunA17_Chr3g0115371 44.248 339 165 8 128 457 24 347 2.82e-78 248
Msa1115980 MtrunA17_Chr5g0424851 42.920 226 119 3 237 456 1 222 1.42e-52 182
Msa1115980 MtrunA17_Chr5g0424851 40.807 223 123 2 239 456 217 435 1.96e-50 177
Msa1115980 MtrunA17_Chr3g0093451 45.178 197 86 7 146 329 22 209 3.59e-47 162
Msa1115980 MtrunA17_Chr1g0196951 31.156 199 115 6 259 452 59 240 4.70e-19 86.3
Msa1115980 MtrunA17_Chr7g0242651 25.112 223 138 5 247 449 6 219 3.15e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1115980 AT5G06839.3 59.050 442 133 13 63 460 22 459 2.28e-168 482
Msa1115980 AT5G06839.1 59.716 422 119 12 63 460 22 416 8.47e-166 474
Msa1115980 AT5G06839.2 59.338 423 120 12 63 460 22 417 5.92e-165 471
Msa1115980 AT1G08320.2 53.448 348 128 10 118 459 10 329 3.32e-118 350
Msa1115980 AT1G08320.5 53.448 348 128 10 118 459 10 329 3.32e-118 350
Msa1115980 AT1G08320.1 52.874 348 130 9 118 459 134 453 5.87e-116 349
Msa1115980 AT1G08320.4 52.874 348 130 9 118 459 134 453 5.87e-116 349
Msa1115980 AT1G08320.3 52.874 348 130 9 118 459 134 453 5.87e-116 349
Msa1115980 AT5G06950.2 53.094 307 129 4 161 459 31 330 1.61e-108 325
Msa1115980 AT5G06950.4 53.094 307 129 4 161 459 31 330 1.61e-108 325
Msa1115980 AT5G06950.1 53.094 307 129 4 161 459 31 330 1.61e-108 325
Msa1115980 AT5G06950.5 53.094 307 129 4 161 459 31 330 1.61e-108 325
Msa1115980 AT5G06950.3 53.094 307 129 4 161 459 31 330 1.61e-108 325
Msa1115980 AT3G12250.6 51.592 314 137 4 154 459 24 330 3.62e-108 323
Msa1115980 AT3G12250.2 51.592 314 137 4 154 459 24 330 3.62e-108 323
Msa1115980 AT3G12250.7 51.592 314 137 4 154 459 24 330 3.62e-108 323
Msa1115980 AT3G12250.1 51.592 314 137 4 154 459 24 330 3.62e-108 323
Msa1115980 AT3G12250.3 51.911 314 136 5 154 459 18 324 1.65e-107 322
Msa1115980 AT3G12250.4 50.606 330 145 6 138 459 36 355 2.07e-107 323
Msa1115980 AT3G12250.5 52.597 308 131 5 160 459 3 303 5.64e-107 320
Msa1115980 AT5G06960.2 54.762 294 118 5 174 459 44 330 2.48e-103 311
Msa1115980 AT5G06960.1 54.762 294 118 5 174 459 44 330 2.48e-103 311
Msa1115980 AT5G06960.3 54.762 294 118 5 174 459 24 310 2.80e-103 310
Msa1115980 AT1G68640.1 52.614 306 132 5 161 458 151 451 7.35e-100 306
Msa1115980 AT5G10030.5 50.512 293 131 5 173 459 78 362 1.31e-93 288
Msa1115980 AT5G10030.3 50.512 293 131 5 173 459 78 362 1.31e-93 288
Msa1115980 AT5G10030.1 50.512 293 131 5 173 459 78 362 1.31e-93 288
Msa1115980 AT5G10030.4 50.512 293 131 5 173 459 78 362 1.31e-93 288
Msa1115980 AT5G10030.2 50.512 293 131 5 173 459 78 362 1.31e-93 288
Msa1115980 AT1G77920.1 49.671 304 133 4 161 459 78 366 2.52e-93 287
Msa1115980 AT1G22070.1 51.299 308 132 7 161 459 84 382 2.63e-93 287
Msa1115980 AT5G65210.6 48.684 304 137 6 162 459 6 296 1.53e-90 277
Msa1115980 AT5G65210.5 47.003 317 151 6 152 459 58 366 3.32e-90 279
Msa1115980 AT5G65210.7 47.003 317 151 6 152 459 58 366 3.32e-90 279
Msa1115980 AT5G65210.3 47.003 317 151 6 152 459 58 366 3.32e-90 279
Msa1115980 AT5G65210.1 47.003 317 151 6 152 459 58 366 3.32e-90 279
Msa1115980 AT5G65210.2 47.003 317 151 6 152 459 58 366 3.32e-90 279
Msa1115980 AT5G65210.4 47.003 317 151 6 152 459 58 366 3.32e-90 279
Msa1115980 AT1G58330.1 25.974 231 137 5 243 449 3 223 1.55e-14 73.2

Find 99 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATATTTCATCTTGTTTC+TGG 0.146768 7_3:-63505931 Msa1115980:CDS
GTCCATTAAGATAGAGAAAA+AGG 0.218834 7_3:+63508221 None:intergenic
GATCATAATCAAATTTCTTT+TGG 0.221378 7_3:-63508562 Msa1115980:CDS
CAACAAATAATGGGCATATA+TGG 0.268804 7_3:-63504969 Msa1115980:CDS
AATGTTTGTGGACAAATTCT+TGG 0.284617 7_3:-63506001 Msa1115980:CDS
GTCCATGTAGTTGGTCATAT+TGG 0.290454 7_3:+63504839 None:intergenic
AGCTTATGATTTGGGTGAAT+TGG 0.294739 7_3:-63508251 Msa1115980:CDS
TAAGCCTTCTGAACTCATTA+AGG 0.295051 7_3:-63505860 Msa1115980:intron
ATTGACCGAGCAACAAATAA+TGG 0.298535 7_3:-63504979 Msa1115980:CDS
GATTCGGGAGCTTATGATTT+GGG 0.302566 7_3:-63508259 Msa1115980:CDS
TGTACGTGCCTTAACAGCTT+TGG 0.332582 7_3:+63507301 None:intergenic
CACATGAAGCAACGTTCAAT+TGG 0.341843 7_3:+63505895 None:intergenic
TCCATGTAGTTGGTCATATT+GGG 0.346409 7_3:+63504840 None:intergenic
TATTAATTACACCTTAGAAT+TGG 0.350406 7_3:+63507470 None:intergenic
GTACGTGCCTTAACAGCTTT+GGG 0.362416 7_3:+63507302 None:intergenic
TGTTCATGGCCCTTGCCATT+TGG 0.365190 7_3:+63504817 None:intergenic
GCCATCATCGTCCAATTCTA+AGG 0.366357 7_3:-63507481 Msa1115980:intron
GGGTGGCTCTGATCCTCTCT+TGG 0.372781 7_3:+63507322 None:intergenic
TGCCATTTGGTCCATGTAGT+TGG 0.373834 7_3:+63504830 None:intergenic
TTCATCTTGTTTCTGGCATG+TGG 0.389553 7_3:-63505924 Msa1115980:CDS
TTTGGTGGAGGTGCAATGTT+GGG 0.390194 7_3:-63506251 Msa1115980:CDS
AGATTCGGGAGCTTATGATT+TGG 0.391428 7_3:-63508260 Msa1115980:CDS
AAGAGTGGAGAGTTTGTTCA+TGG 0.395292 7_3:+63504803 None:intergenic
AGTTGAGTAGTGGTTTGGTT+TGG 0.401033 7_3:+63508670 None:intergenic
GTTCTAGTTGAGTAGTGGTT+TGG 0.401946 7_3:+63508665 None:intergenic
ACATGAAGCAACGTTCAATT+GGG 0.406516 7_3:+63505896 None:intergenic
ATTATTTGTTGCTCGGTCAA+TGG 0.410343 7_3:+63504981 None:intergenic
GTCAGCAGAAATAAAGATTC+GGG 0.416098 7_3:-63508274 Msa1115980:intron
TCTTCATCACCCTCTGTCCT+TGG 0.418587 7_3:-63508526 Msa1115980:CDS
CTCTTGGATCCACTTGTTTG+CGG 0.419959 7_3:+63507338 None:intergenic
ATTTGATTATGATCATGTAT+TGG 0.421851 7_3:+63508571 None:intergenic
TGTCAGCAGAAATAAAGATT+CGG 0.439709 7_3:-63508275 Msa1115980:intron
TATGCCCATTATTTGTTGCT+CGG 0.446315 7_3:+63504974 None:intergenic
CTTTGGTGGAGGTGCAATGT+TGG 0.447414 7_3:-63506252 Msa1115980:CDS
GACCAACTACATGGACCAAA+TGG 0.454379 7_3:-63504832 Msa1115980:CDS
GAGCTGATGGTATTCATAGA+AGG 0.455238 7_3:+63506212 None:intergenic
TGATGACGGTGTTGAGGTGG+TGG 0.456563 7_3:+63508637 None:intergenic
ATTGCAACAATCTACACAAC+AGG 0.456913 7_3:-63504946 Msa1115980:CDS
TTGACCGAGCAACAAATAAT+GGG 0.460762 7_3:-63504978 Msa1115980:CDS
TAGGGCATGTTCTTTGGTGG+AGG 0.462298 7_3:-63506263 Msa1115980:CDS
GATCTGATTCAGACGATGAA+TGG 0.463347 7_3:+63502347 None:intergenic
TCATGTTCAGAACTTGAAGT+TGG 0.464502 7_3:+63506827 None:intergenic
AAAGAGTTAACCTTAGGATC+TGG 0.468362 7_3:+63506791 None:intergenic
TCCACAGAAAATTCAACATC+AGG 0.468688 7_3:-63507555 Msa1115980:intron
CTCTTAGTTCACATACTAAA+CGG 0.475671 7_3:+63506061 None:intergenic
CGTTGCTTCATGTGGATTGG+TGG 0.475727 7_3:-63505886 Msa1115980:CDS
GAATGAGCTTAGAATGTTTG+TGG 0.479362 7_3:-63506013 Msa1115980:CDS
CGGTGTTGAGGTGGTGGGAG+TGG 0.482044 7_3:+63508643 None:intergenic
ACCTTAGAATTGGACGATGA+TGG 0.485367 7_3:+63507480 None:intergenic
CAAACTTAATCAGATGGAAC+AGG 0.485599 7_3:-63506387 Msa1115980:CDS
AACATTCTAAGCTCATTCTC+AGG 0.491670 7_3:+63506018 None:intergenic
ACCTAAAACACCAGATCCTA+AGG 0.513193 7_3:-63506801 Msa1115980:intron
CAATTGAACGTTGCTTCATG+TGG 0.518218 7_3:-63505894 Msa1115980:CDS
TCATCTTGTTTCTGGCATGT+GGG 0.519428 7_3:-63505923 Msa1115980:CDS
GAACGTTGCTTCATGTGGAT+TGG 0.530260 7_3:-63505889 Msa1115980:CDS
GAGTGGTTCTAGTTGAGTAG+TGG 0.532015 7_3:+63508660 None:intergenic
GATTCAGACGATGAATGGTT+TGG 0.540713 7_3:+63502352 None:intergenic
TTTGGTCTTGAACACTGGAT+GGG 0.540777 7_3:+63508191 None:intergenic
CAGAATCAAACTTAATCAGA+TGG 0.550271 7_3:-63506393 Msa1115980:CDS
TCCCAATATGACCAACTACA+TGG 0.555270 7_3:-63504841 Msa1115980:CDS
GGAGAAGATGCTCTCTCTCA+AGG 0.558918 7_3:-63504924 Msa1115980:CDS
TGCTCTCTCTCAAGGACTTG+AGG 0.560629 7_3:-63504916 Msa1115980:CDS
AAAATTCAACATCAGGAATG+AGG 0.564641 7_3:-63507548 Msa1115980:CDS
AACTCAATGCTCGCATACGA+TGG 0.565611 7_3:+63502274 None:intergenic
TCTACATGCATAGGCTGAGA+AGG 0.566999 7_3:+63507504 None:intergenic
AGAGATCACACCTGAGCTGA+TGG 0.567180 7_3:+63506199 None:intergenic
TCTTGAAAGTTTCGTGAGAG+AGG 0.574448 7_3:-63504784 Msa1115980:intron
CCTACCTTAATGAGTTCAGA+AGG 0.576512 7_3:+63505856 None:intergenic
GCAATGTTGGGAGGAGAACA+AGG 0.577141 7_3:-63506239 Msa1115980:CDS
ATTGGATGATGATGATGTTG+TGG 0.582586 7_3:+63508589 None:intergenic
TCTATGAATACCATCAGCTC+AGG 0.584390 7_3:-63506209 Msa1115980:intron
TTAGTTTCTCCGCAAACAAG+TGG 0.585262 7_3:-63507347 Msa1115980:CDS
GATGATGAATTTGATGATGA+CGG 0.596752 7_3:+63508623 None:intergenic
AGCATTGAGTTCTCTGTGGA+TGG 0.600154 7_3:-63502262 Msa1115980:CDS
GATGATGGCTCTACATGCAT+AGG 0.601506 7_3:+63507495 None:intergenic
TGATGATGACGGTGTTGAGG+TGG 0.603280 7_3:+63508634 None:intergenic
GGTGGAGGTGCAATGTTGGG+AGG 0.609507 7_3:-63506248 Msa1115980:CDS
GGAATATGCAAGGTGGCTTG+AGG 0.611113 7_3:-63506091 Msa1115980:CDS
TCTCACGAAACTTTCAAGAG+TGG 0.621714 7_3:+63504788 None:intergenic
TAACGACGCGTCAAGCAGCA+AGG 0.625480 7_3:-63502323 Msa1115980:CDS
GATGACGGTGTTGAGGTGGT+GGG 0.626282 7_3:+63508638 None:intergenic
ACTACATGGACCAAATGGCA+AGG 0.628760 7_3:-63504827 Msa1115980:CDS
TGATGGTATTCATAGAAGGA+AGG 0.632449 7_3:+63506216 None:intergenic
ATTTGATGATGACGGTGTTG+AGG 0.632863 7_3:+63508631 None:intergenic
TGTTCGACGTGGAATATGCA+AGG 0.637472 7_3:-63506101 Msa1115980:CDS
CATGAAGCAACGTTCAATTG+GGG 0.638346 7_3:+63505897 None:intergenic
ATGTAGTTGGTCATATTGGG+AGG 0.641383 7_3:+63504843 None:intergenic
CAAACAAGTGGATCCAAGAG+AGG 0.644811 7_3:-63507335 Msa1115980:CDS
CGTGCCTTAACAGCTTTGGG+TGG 0.648085 7_3:+63507305 None:intergenic
ACGATGGAAGTACTCAGCCA+TGG 0.660105 7_3:+63502290 None:intergenic
ACTTCAAGTTCTGAACATGA+AGG 0.660838 7_3:-63506824 Msa1115980:CDS
ACTGAATGCTATTCTTGACG+AGG 0.667157 7_3:+63502234 None:intergenic
CTACATGGACCAAATGGCAA+GGG 0.682858 7_3:-63504826 Msa1115980:CDS
AGAGGCTGCAATGTTCGACG+TGG 0.690011 7_3:-63506112 Msa1115980:CDS
CTGAATGCTATTCTTGACGA+GGG 0.692425 7_3:+63502235 None:intergenic
TTGCAACAATCTACACAACA+GGG 0.697295 7_3:-63504945 Msa1115980:CDS
TGCGAGCATTGAGTTCTCTG+TGG 0.708965 7_3:-63502266 Msa1115980:CDS
TTAGTTCACATACTAAACGG+TGG 0.740777 7_3:+63506064 None:intergenic
TCGACGTGGAATATGCAAGG+TGG 0.768115 7_3:-63506098 Msa1115980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATTAATTATTTTAT+AGG - chr7_3:63503552-63503571 Msa1115980:intron 0.0%
!! TAAACTATTAATTAACATAT+TGG + chr7_3:63503675-63503694 None:intergenic 10.0%
!! TAAACTATTAATTAACATAT+TGG + chr7_3:63503675-63503694 None:intergenic 10.0%
!!! TTACTTTTTTTTATTCTTTT+TGG - chr7_3:63504247-63504266 Msa1115980:intron 10.0%
!! ATTTCAAATATTTATATAAG+AGG + chr7_3:63504792-63504811 None:intergenic 10.0%
!!! ATTTTATGATAATTTTTATG+CGG - chr7_3:63505252-63505271 Msa1115980:intron 10.0%
!!! TATATATTTTTTAAAGTGAT+TGG - chr7_3:63506695-63506714 Msa1115980:intron 10.0%
!! TTTAAAAAAAAGAAAATAAC+CGG - chr7_3:63508514-63508533 Msa1115980:intron 10.0%
!!! TTCTTTCTTTTTTCTAAAAA+AGG - chr7_3:63503052-63503071 Msa1115980:intron 15.0%
!!! TCTTTCTTTTTTCTAAAAAA+GGG - chr7_3:63503053-63503072 Msa1115980:intron 15.0%
!! TCAAAAAAATAATAAGAGTT+TGG - chr7_3:63503734-63503753 Msa1115980:intron 15.0%
!! TCAAAAAAATAATAAGAGTT+TGG - chr7_3:63503734-63503753 Msa1115980:intron 15.0%
!!! TTTTTTACATTTTTTGTCAA+TGG - chr7_3:63504442-63504461 Msa1115980:intron 15.0%
!!! TTTATTGTTATTTCCATTTT+AGG - chr7_3:63504651-63504670 Msa1115980:intron 15.0%
!!! TTATTGTTATTTCCATTTTA+GGG - chr7_3:63504652-63504671 Msa1115980:intron 15.0%
!! AATATTATAAAGTTGAACTT+TGG - chr7_3:63505226-63505245 Msa1115980:intron 15.0%
!! ATTTCTTAATCAATGTTATA+AGG + chr7_3:63505498-63505517 None:intergenic 15.0%
!! CTTATTGTTAATGAAATTAT+GGG - chr7_3:63505590-63505609 Msa1115980:intron 15.0%
!!! ATTTTTTTTTAGATGACAAA+AGG + chr7_3:63506287-63506306 None:intergenic 15.0%
!!! TGTATATATTAGTGATTTTT+AGG - chr7_3:63506382-63506401 Msa1115980:CDS 15.0%
!!! AATTTTCTTTGTGAAATTTA+TGG - chr7_3:63507234-63507253 Msa1115980:intron 15.0%
!!! AAAATTTTGTTTGTTAACTA+TGG - chr7_3:63507421-63507440 Msa1115980:intron 15.0%
!!! AAATTTTGTTTGTTAACTAT+GGG - chr7_3:63507422-63507441 Msa1115980:intron 15.0%
!! ATCATTATCATTAGTATATA+TGG + chr7_3:63507675-63507694 None:intergenic 15.0%
!! CAAGAATAATAAATAGTTAT+AGG + chr7_3:63508080-63508099 None:intergenic 15.0%
!!! TTTATTATTCTTGTTTTCAA+AGG - chr7_3:63508087-63508106 Msa1115980:intron 15.0%
!! ATTTGATTATGATCATGTAT+TGG + chr7_3:63502365-63502384 None:intergenic 20.0%
!!! GATCATAATCAAATTTCTTT+TGG - chr7_3:63502371-63502390 Msa1115980:CDS 20.0%
!! TGTCTTACGTTAAAAAAAAT+TGG - chr7_3:63502600-63502619 Msa1115980:intron 20.0%
!! AATGATAGAATGAATAAAGA+GGG + chr7_3:63503252-63503271 None:intergenic 20.0%
!! AAATGATAGAATGAATAAAG+AGG + chr7_3:63503253-63503272 None:intergenic 20.0%
!! TATTAATTACACCTTAGAAT+TGG + chr7_3:63503466-63503485 None:intergenic 20.0%
!! TTTGTTACACTTCATATTAA+TGG - chr7_3:63503528-63503547 Msa1115980:intron 20.0%
!! AAGAAACAATTATAAGAGTT+TGG - chr7_3:63503707-63503726 Msa1115980:intron 20.0%
!! AAGAAACAATTATAAGAGTT+TGG - chr7_3:63503707-63503726 Msa1115980:intron 20.0%
!! ATAAAATGTGGATATGAAAT+GGG + chr7_3:63504219-63504238 None:intergenic 20.0%
!! TAAAAAACACAACACAAATA+TGG + chr7_3:63504429-63504448 None:intergenic 20.0%
!!! TTTTATTTGTACTCTTTTTC+AGG - chr7_3:63504492-63504511 Msa1115980:intron 20.0%
!! AAACAAGAAAAATATCTTCA+TGG - chr7_3:63504595-63504614 Msa1115980:intron 20.0%
!! TGATTAAACATGCATTATAA+GGG + chr7_3:63504763-63504782 None:intergenic 20.0%
!! TTGATTAAACATGCATTATA+AGG + chr7_3:63504764-63504783 None:intergenic 20.0%
!!! ATTTGAAATGAATATTTCAG+AGG - chr7_3:63504803-63504822 Msa1115980:CDS 20.0%
!! ATTCATAAACTTAGTATTGT+CGG - chr7_3:63505339-63505358 Msa1115980:intron 20.0%
!! TTAATCAATGTTATAAGGTA+TGG + chr7_3:63505493-63505512 None:intergenic 20.0%
!! CCATAATTTCATTAACAATA+AGG + chr7_3:63505592-63505611 None:intergenic 20.0%
!! CCTTATTGTTAATGAAATTA+TGG - chr7_3:63505589-63505608 Msa1115980:intron 20.0%
!! TCAATACTAATACTATAAGA+GGG + chr7_3:63505732-63505751 None:intergenic 20.0%
!! ATCAATACTAATACTATAAG+AGG + chr7_3:63505733-63505752 None:intergenic 20.0%
!! AGAAACATAAAAATCACATT+TGG + chr7_3:63505893-63505912 None:intergenic 20.0%
!! AAATAATAGTATTTGCGAAT+AGG - chr7_3:63506215-63506234 Msa1115980:CDS 20.0%
!! CATATAGATATTGTTAATCA+TGG - chr7_3:63506338-63506357 Msa1115980:intron 20.0%
!!! TATATTAGTGATTTTTAGGA+TGG - chr7_3:63506386-63506405 Msa1115980:CDS 20.0%
!! AAATTCAAAAAGGATGTTAT+GGG + chr7_3:63507015-63507034 None:intergenic 20.0%
!! AAAATTCAAAAAGGATGTTA+TGG + chr7_3:63507016-63507035 None:intergenic 20.0%
!!! CTTTTAGTCAAAATTCAAAA+AGG + chr7_3:63507025-63507044 None:intergenic 20.0%
!!! ATTTTGACTAAAAGTACAAA+CGG - chr7_3:63507031-63507050 Msa1115980:intron 20.0%
!!! CAAAGATTTTTGAATCAAAT+TGG - chr7_3:63507112-63507131 Msa1115980:intron 20.0%
!! TAGAAGAAAACAAAATGATA+TGG + chr7_3:63507138-63507157 None:intergenic 20.0%
!!! ATATCATTTTGTTTTCTTCT+AGG - chr7_3:63507137-63507156 Msa1115980:intron 20.0%
!! AAAAAAATCACACTATATTG+TGG + chr7_3:63507280-63507299 None:intergenic 20.0%
!! TTCATTAACAATTCTTGAAA+TGG - chr7_3:63507450-63507469 Msa1115980:intron 20.0%
!! CAAATTAACACATATGATAT+TGG + chr7_3:63507490-63507509 None:intergenic 20.0%
!! TAGATTCAAAGATGTATAAT+TGG + chr7_3:63507592-63507611 None:intergenic 20.0%
!! GTTATAGATAACCAAAATTT+CGG - chr7_3:63508014-63508033 Msa1115980:intron 20.0%
! NNNNNNACATGTAGTTTCCA+AGG + chr7_3:63502427-63502446 None:intergenic 25.0%
! TCCATTAAGATAGAGAAAAA+GGG + chr7_3:63502714-63502733 None:intergenic 25.0%
!! CAAAAAAAAACTCACGTTTT+TGG + chr7_3:63502763-63502782 None:intergenic 25.0%
! ATTTCAAGCAAAACGTTATA+GGG + chr7_3:63502839-63502858 None:intergenic 25.0%
! AATTTCAAGCAAAACGTTAT+AGG + chr7_3:63502840-63502859 None:intergenic 25.0%
! TTGCTTGAAATTCAAAAAGA+AGG - chr7_3:63502848-63502867 Msa1115980:intron 25.0%
! TATAACAAACCAAAAGTGAA+AGG + chr7_3:63502882-63502901 None:intergenic 25.0%
! AAATATTTACAAGAGTAGAG+AGG - chr7_3:63503146-63503165 Msa1115980:intron 25.0%
! CTATTTAATGTTGCTGAATT+TGG - chr7_3:63503341-63503360 Msa1115980:intron 25.0%
!!! AATTATTTTATAGGCTAGCA+TGG - chr7_3:63503561-63503580 Msa1115980:intron 25.0%
! AAGATTAAAGAGTTAACCTT+AGG + chr7_3:63504151-63504170 None:intergenic 25.0%
! TAAAATGTGGATATGAAATG+GGG + chr7_3:63504218-63504237 None:intergenic 25.0%
! GATAAAATGTGGATATGAAA+TGG + chr7_3:63504220-63504239 None:intergenic 25.0%
! GTAACAAGATTGATAAAATG+TGG + chr7_3:63504231-63504250 None:intergenic 25.0%
!! GATATATTTCATCTTGTTTC+TGG - chr7_3:63505002-63505021 Msa1115980:CDS 25.0%
! TGTTAAATAGTGTTAAGTCA+TGG + chr7_3:63505144-63505163 None:intergenic 25.0%
!! ATAATTTTTATGCGGAGAAT+AGG - chr7_3:63505260-63505279 Msa1115980:intron 25.0%
!! TAATTTTTATGCGGAGAATA+GGG - chr7_3:63505261-63505280 Msa1115980:intron 25.0%
! TAACGTTATAGTCATTCAAA+AGG - chr7_3:63505296-63505315 Msa1115980:intron 25.0%
!!! GCTCTTCTTTTTTATTTCTT+TGG + chr7_3:63505377-63505396 None:intergenic 25.0%
!! TGAAGATTTTCCATATTGTA+CGG - chr7_3:63505440-63505459 Msa1115980:intron 25.0%
! TAGTTGTTGAATTCAATGTT+AGG - chr7_3:63505811-63505830 Msa1115980:intron 25.0%
! AACTAACTTAAAGAGATAGA+TGG + chr7_3:63506590-63506609 None:intergenic 25.0%
!! ATCTCTTTAAGTTAGTTACA+TGG - chr7_3:63506593-63506612 Msa1115980:CDS 25.0%
! TTCACATTGATGAATTTCTA+AGG - chr7_3:63506827-63506846 Msa1115980:CDS 25.0%
!!! AGGGATAGTATCTTTTAATT+AGG + chr7_3:63506923-63506942 None:intergenic 25.0%
! AATTCAAAAAGGATGTTATG+GGG + chr7_3:63507014-63507033 None:intergenic 25.0%
!! CTCATGTCTAATATGATTTT+TGG - chr7_3:63507067-63507086 Msa1115980:intron 25.0%
!!! ATCAAAATATCGACTGATTT+TGG - chr7_3:63507161-63507180 Msa1115980:intron 25.0%
!!! TTGAATTAAGTTGAAAGCAA+TGG - chr7_3:63507200-63507219 Msa1115980:intron 25.0%
! ATATAGACATTGATAGAAGT+CGG + chr7_3:63507541-63507560 None:intergenic 25.0%
! ATCAATGTCTATATTAGTAG+CGG - chr7_3:63507547-63507566 Msa1115980:CDS 25.0%
! AAGCTAGAGGAATATTAATT+AGG - chr7_3:63507645-63507664 Msa1115980:intron 25.0%
! CAAGAACAAATACTACAAAT+TGG + chr7_3:63507755-63507774 None:intergenic 25.0%
! TTTGTAGTATTTGTTCTTGT+TGG - chr7_3:63507756-63507775 Msa1115980:intron 25.0%
!! TAGGTTTTCTTAGTCAAATT+TGG + chr7_3:63508048-63508067 None:intergenic 25.0%
! TAGTTATAGGAACATGATAT+AGG + chr7_3:63508067-63508086 None:intergenic 25.0%
!!! TATTTTTTTAGACGATTCAG+CGG - chr7_3:63508459-63508478 Msa1115980:intron 25.0%
! TTAGTATGAACAGTATTATC+TGG + chr7_3:63508485-63508504 None:intergenic 25.0%
! TCAATTCAAATCACAATTAC+CGG + chr7_3:63508536-63508555 None:intergenic 25.0%
!! GATGATGAATTTGATGATGA+CGG + chr7_3:63502313-63502332 None:intergenic 30.0%
TGTCAGCAGAAATAAAGATT+CGG - chr7_3:63502658-63502677 Msa1115980:intron 30.0%
GTCCATTAAGATAGAGAAAA+AGG + chr7_3:63502715-63502734 None:intergenic 30.0%
! AACCAAAAGTGTGGAAAAAT+TGG - chr7_3:63503001-63503020 Msa1115980:intron 30.0%
! TTCCAATTTTTCCACACTTT+TGG + chr7_3:63503006-63503025 None:intergenic 30.0%
!! AAAGAGGGTCTATTTTTCAA+AGG + chr7_3:63503237-63503256 None:intergenic 30.0%
AAAATTCAACATCAGGAATG+AGG - chr7_3:63503385-63503404 Msa1115980:intron 30.0%
CTATAGTATAGTAAACGCAT+AGG + chr7_3:63504059-63504078 None:intergenic 30.0%
CAGAATCAAACTTAATCAGA+TGG - chr7_3:63504540-63504559 Msa1115980:intron 30.0%
GTAACCTAAAATGCAATAAC+CGG - chr7_3:63504617-63504636 Msa1115980:intron 30.0%
ACAATAAATCATGACATGTC+CGG + chr7_3:63504639-63504658 None:intergenic 30.0%
CTCTTAGTTCACATACTAAA+CGG + chr7_3:63504875-63504894 None:intergenic 30.0%
AATGTTTGTGGACAAATTCT+TGG - chr7_3:63504932-63504951 Msa1115980:CDS 30.0%
ATAAACTTAGTATTGTCGGT+GGG - chr7_3:63505343-63505362 Msa1115980:intron 30.0%
CTACAATACAAAAGAGAGAT+GGG + chr7_3:63505637-63505656 None:intergenic 30.0%
ACTACAATACAAAAGAGAGA+TGG + chr7_3:63505638-63505657 None:intergenic 30.0%
! CATATTTTGTGAGTTAAGAG+AGG + chr7_3:63505681-63505700 None:intergenic 30.0%
CTCTCTTAACTCACAAAATA+TGG - chr7_3:63505679-63505698 Msa1115980:intron 30.0%
ATACTATAAGAGGGAAAGTA+TGG + chr7_3:63505723-63505742 None:intergenic 30.0%
!! CAACAAATAATGGGCATATA+TGG - chr7_3:63505964-63505983 Msa1115980:intron 30.0%
CATGTCAAATAGTCAAAGTA+AGG + chr7_3:63506182-63506201 None:intergenic 30.0%
TTAATCATGGACGTTGAATT+TGG - chr7_3:63506351-63506370 Msa1115980:intron 30.0%
!!! ATCATGGTTGATTAGTTTTG+TGG - chr7_3:63506431-63506450 Msa1115980:intron 30.0%
ATGAAAACTTTGTCAAGTCA+TGG + chr7_3:63506471-63506490 None:intergenic 30.0%
!! AGTTTTCATAACTGATTTCG+TGG - chr7_3:63506482-63506501 Msa1115980:intron 30.0%
!! GTTTTCATAACTGATTTCGT+GGG - chr7_3:63506483-63506502 Msa1115980:intron 30.0%
!! TTTTCATAACTGATTTCGTG+GGG - chr7_3:63506484-63506503 Msa1115980:intron 30.0%
AACTTAAAGAGATAGATGGA+TGG + chr7_3:63506586-63506605 None:intergenic 30.0%
!! ATAGCAAAGGTACCATAATA+AGG - chr7_3:63506754-63506773 Msa1115980:intron 30.0%
ATAGCTAGGAAACCTTATTA+TGG + chr7_3:63506769-63506788 None:intergenic 30.0%
AATAAGGTTTCCTAGCTATA+AGG - chr7_3:63506770-63506789 Msa1115980:intron 30.0%
CACGTGAAAGTTAATATTAG+TGG - chr7_3:63506879-63506898 Msa1115980:intron 30.0%
ATTAGGATTGTATCATCAGT+GGG + chr7_3:63506906-63506925 None:intergenic 30.0%
AATTAGGATTGTATCATCAG+TGG + chr7_3:63506907-63506926 None:intergenic 30.0%
TTGTATATTTGCTTGCTTGT+GGG + chr7_3:63507403-63507422 None:intergenic 30.0%
TTTGTATATTTGCTTGCTTG+TGG + chr7_3:63507404-63507423 None:intergenic 30.0%
AATTCTTGAAATGGTAACCT+AGG - chr7_3:63507459-63507478 Msa1115980:intron 30.0%
TAACACATATGATATTGGTG+AGG + chr7_3:63507485-63507504 None:intergenic 30.0%
ATCTATTGTAAGTAACCGAT+CGG - chr7_3:63507607-63507626 Msa1115980:intron 30.0%
!! GATTTTTCAAAGTACGTAAG+GGG + chr7_3:63507955-63507974 None:intergenic 30.0%
!! CGATTTTTCAAAGTACGTAA+GGG + chr7_3:63507956-63507975 None:intergenic 30.0%
!! ACGATTTTTCAAAGTACGTA+AGG + chr7_3:63507957-63507976 None:intergenic 30.0%
!!! TCTTGTTTTCAAAGGTAGAA+AGG - chr7_3:63508095-63508114 Msa1115980:intron 30.0%
!! CTTGTTTTCAAAGGTAGAAA+GGG - chr7_3:63508096-63508115 Msa1115980:intron 30.0%
ACAATGTATATGTTTGTGTG+AGG + chr7_3:63508237-63508256 None:intergenic 30.0%
ATTATGTGTACTTATCCTCT+AGG - chr7_3:63508288-63508307 Msa1115980:intron 30.0%
TTATGTGTACTTATCCTCTA+GGG - chr7_3:63508289-63508308 Msa1115980:intron 30.0%
! TGAGTCAACTCTATATTTTG+CGG + chr7_3:63508419-63508438 None:intergenic 30.0%
GTGATTTGAATTGAACTTAC+AGG - chr7_3:63508542-63508561 Msa1115980:CDS 30.0%
!!! TTGGTTTGGTTTTTCAACAC+TGG + chr7_3:63502252-63502271 None:intergenic 35.0%
! ATTGGATGATGATGATGTTG+TGG + chr7_3:63502347-63502366 None:intergenic 35.0%
GTCAGCAGAAATAAAGATTC+GGG - chr7_3:63502659-63502678 Msa1115980:intron 35.0%
! AGCTTATGATTTGGGTGAAT+TGG - chr7_3:63502682-63502701 Msa1115980:intron 35.0%
! GCCCTTTTTCTCTATCTTAA+TGG - chr7_3:63502710-63502729 Msa1115980:intron 35.0%
AACGTTATAGGGATTTGGAA+GGG + chr7_3:63502828-63502847 None:intergenic 35.0%
AAACGTTATAGGGATTTGGA+AGG + chr7_3:63502829-63502848 None:intergenic 35.0%
AGCAAAACGTTATAGGGATT+TGG + chr7_3:63502833-63502852 None:intergenic 35.0%
! GACTCTTTTCCTTTCACTTT+TGG - chr7_3:63502870-63502889 Msa1115980:intron 35.0%
!! TGTTTTGCTTTTCTGCAGAA+AGG + chr7_3:63502981-63503000 None:intergenic 35.0%
AGCAAAACAAACCAAAAGTG+TGG - chr7_3:63502992-63503011 Msa1115980:intron 35.0%
TCCACAGAAAATTCAACATC+AGG - chr7_3:63503378-63503397 Msa1115980:intron 35.0%
! TCCTGATGTTGAATTTTCTG+TGG + chr7_3:63503382-63503401 None:intergenic 35.0%
GAAGGAAAAATGTTGAGAGT+TGG + chr7_3:63503414-63503433 None:intergenic 35.0%
GCATAGGTAGGTGATTAATT+AGG + chr7_3:63504043-63504062 None:intergenic 35.0%
AGTATAGTAAACGCATAGGT+AGG + chr7_3:63504055-63504074 None:intergenic 35.0%
TCATGTTCAGAACTTGAAGT+TGG + chr7_3:63504109-63504128 None:intergenic 35.0%
!! ACTTCAAGTTCTGAACATGA+AGG - chr7_3:63504109-63504128 Msa1115980:intron 35.0%
AAAGAGTTAACCTTAGGATC+TGG + chr7_3:63504145-63504164 None:intergenic 35.0%
AAAAAGCAGGCTTAGGAAAA+AGG - chr7_3:63504369-63504388 Msa1115980:intron 35.0%
AGGCTTAGGAAAAAGGTAAA+TGG - chr7_3:63504376-63504395 Msa1115980:intron 35.0%
CAAACTTAATCAGATGGAAC+AGG - chr7_3:63504546-63504565 Msa1115980:intron 35.0%
! ATGTCCGGTTATTGCATTTT+AGG + chr7_3:63504624-63504643 None:intergenic 35.0%
TGATGGTATTCATAGAAGGA+AGG + chr7_3:63504720-63504739 None:intergenic 35.0%
TTAGTTCACATACTAAACGG+TGG + chr7_3:63504872-63504891 None:intergenic 35.0%
AACATTCTAAGCTCATTCTC+AGG + chr7_3:63504918-63504937 None:intergenic 35.0%
GAATGAGCTTAGAATGTTTG+TGG - chr7_3:63504920-63504939 Msa1115980:CDS 35.0%
ACATGAAGCAACGTTCAATT+GGG + chr7_3:63505040-63505059 None:intergenic 35.0%
TAAGCCTTCTGAACTCATTA+AGG - chr7_3:63505073-63505092 Msa1115980:intron 35.0%
ACACTATTCCAAGTAACCAA+AGG - chr7_3:63505103-63505122 Msa1115980:intron 35.0%
GAAATGAACCTTTGGTTACT+TGG + chr7_3:63505114-63505133 None:intergenic 35.0%
GCATGAATGAAATGAACCTT+TGG + chr7_3:63505122-63505141 None:intergenic 35.0%
CATAAACTTAGTATTGTCGG+TGG - chr7_3:63505342-63505361 Msa1115980:intron 35.0%
TAAACTTAGTATTGTCGGTG+GGG - chr7_3:63505344-63505363 Msa1115980:intron 35.0%
TCTAACTCTACCGTACAATA+TGG + chr7_3:63505453-63505472 None:intergenic 35.0%
ATACAAAAGAGAGATGGGTA+TGG + chr7_3:63505632-63505651 None:intergenic 35.0%
! ATTATTTGTTGCTCGGTCAA+TGG + chr7_3:63505955-63505974 None:intergenic 35.0%
ATTGACCGAGCAACAAATAA+TGG - chr7_3:63505954-63505973 Msa1115980:intron 35.0%
TTGACCGAGCAACAAATAAT+GGG - chr7_3:63505955-63505974 Msa1115980:intron 35.0%
! TATGCCCATTATTTGTTGCT+CGG + chr7_3:63505962-63505981 None:intergenic 35.0%
ATTGCAACAATCTACACAAC+AGG - chr7_3:63505987-63506006 Msa1115980:CDS 35.0%
TTGCAACAATCTACACAACA+GGG - chr7_3:63505988-63506007 Msa1115980:CDS 35.0%
TCCATGTAGTTGGTCATATT+GGG + chr7_3:63506096-63506115 None:intergenic 35.0%
! TTTCATAACTGATTTCGTGG+GGG - chr7_3:63506485-63506504 Msa1115980:intron 35.0%
AAGAAGAATCTGTTGTCCTT+GGG - chr7_3:63506522-63506541 Msa1115980:intron 35.0%
TAAAGAGATAGATGGATGGA+AGG + chr7_3:63506582-63506601 None:intergenic 35.0%
GAGAGTTAGTTAGTACACAT+AGG - chr7_3:63506721-63506740 Msa1115980:intron 35.0%
TTCCTAGCTATAAGGTTATG+AGG - chr7_3:63506778-63506797 Msa1115980:intron 35.0%
ATCCTCATAACCTTATAGCT+AGG + chr7_3:63506783-63506802 None:intergenic 35.0%
CATGACATCACATAGATATG+GGG + chr7_3:63506950-63506969 None:intergenic 35.0%
CCATGACATCACATAGATAT+GGG + chr7_3:63506951-63506970 None:intergenic 35.0%
ACCATGACATCACATAGATA+TGG + chr7_3:63506952-63506971 None:intergenic 35.0%
AAAAAGGATGTTATGGGGAA+GGG + chr7_3:63507009-63507028 None:intergenic 35.0%
CAAATTGGTCAAACTATGAC+TGG + chr7_3:63507740-63507759 None:intergenic 35.0%
! TGGAACGTTAACCGAAATTT+TGG + chr7_3:63508028-63508047 None:intergenic 35.0%
CAGTTGAATCTACAAGCAAA+AGG - chr7_3:63508192-63508211 Msa1115980:CDS 35.0%
TTGAATCTACAAGCAAAAGG+TGG - chr7_3:63508195-63508214 Msa1115980:CDS 35.0%
ATGTATATGTTTGTGTGAGG+AGG + chr7_3:63508234-63508253 None:intergenic 35.0%
!! ACCACAATTTGACTTGATCA+GGG + chr7_3:63508322-63508341 None:intergenic 35.0%
!! AACCACAATTTGACTTGATC+AGG + chr7_3:63508323-63508342 None:intergenic 35.0%
TGATCAAGTCAAATTGTGGT+TGG - chr7_3:63508322-63508341 Msa1115980:intron 35.0%
TTATCGATCACTGTAGTGAT+AGG - chr7_3:63508364-63508383 Msa1115980:intron 35.0%
!! AGTTGAGTAGTGGTTTGGTT+TGG + chr7_3:63502266-63502285 None:intergenic 40.0%
! GTTCTAGTTGAGTAGTGGTT+TGG + chr7_3:63502271-63502290 None:intergenic 40.0%
!! ATTTGATGATGACGGTGTTG+AGG + chr7_3:63502305-63502324 None:intergenic 40.0%
ATGTAGTTTCCAAGGACAGA+GGG + chr7_3:63502419-63502438 None:intergenic 40.0%
AGATTCGGGAGCTTATGATT+TGG - chr7_3:63502673-63502692 Msa1115980:intron 40.0%
GATTCGGGAGCTTATGATTT+GGG - chr7_3:63502674-63502693 Msa1115980:intron 40.0%
!! TTTGGTCTTGAACACTGGAT+GGG + chr7_3:63502745-63502764 None:intergenic 40.0%
!!! TTTTGGTCTTGAACACTGGA+TGG + chr7_3:63502746-63502765 None:intergenic 40.0%
!!! ACGTTTTTGGTCTTGAACAC+TGG + chr7_3:63502750-63502769 None:intergenic 40.0%
GATTCTCCTGAACATGCTAT+CGG + chr7_3:63502925-63502944 None:intergenic 40.0%
GGAAAAATGTTGAGAGTTGG+TGG + chr7_3:63503411-63503430 None:intergenic 40.0%
ACCTTAGAATTGGACGATGA+TGG + chr7_3:63503456-63503475 None:intergenic 40.0%
TTAGTTTCTCCGCAAACAAG+TGG - chr7_3:63503586-63503605 Msa1115980:intron 40.0%
TAGCAGCGAGAGAAAAATCA+TGG - chr7_3:63504076-63504095 Msa1115980:intron 40.0%
CGAGAGAAAAATCATGGCAA+GGG - chr7_3:63504082-63504101 Msa1115980:intron 40.0%
ACCTAAAACACCAGATCCTA+AGG - chr7_3:63504132-63504151 Msa1115980:intron 40.0%
! ACCTTAGGATCTGGTGTTTT+AGG + chr7_3:63504136-63504155 None:intergenic 40.0%
CCAAAGAACATGCCCTAAAA+TGG + chr7_3:63504667-63504686 None:intergenic 40.0%
!!! CCATTTTAGGGCATGTTCTT+TGG - chr7_3:63504664-63504683 Msa1115980:intron 40.0%
!!! TTTTAGGGCATGTTCTTTGG+TGG - chr7_3:63504667-63504686 Msa1115980:intron 40.0%
GAGCTGATGGTATTCATAGA+AGG + chr7_3:63504724-63504743 None:intergenic 40.0%
TCTATGAATACCATCAGCTC+AGG - chr7_3:63504724-63504743 Msa1115980:intron 40.0%
!! TTCATCTTGTTTCTGGCATG+TGG - chr7_3:63505009-63505028 Msa1115980:intron 40.0%
!! TCATCTTGTTTCTGGCATGT+GGG - chr7_3:63505010-63505029 Msa1115980:intron 40.0%
CATGAAGCAACGTTCAATTG+GGG + chr7_3:63505039-63505058 None:intergenic 40.0%
CACATGAAGCAACGTTCAAT+TGG + chr7_3:63505041-63505060 None:intergenic 40.0%
CAATTGAACGTTGCTTCATG+TGG - chr7_3:63505039-63505058 Msa1115980:intron 40.0%
CCTACCTTAATGAGTTCAGA+AGG + chr7_3:63505080-63505099 None:intergenic 40.0%
CCTTCTGAACTCATTAAGGT+AGG - chr7_3:63505077-63505096 Msa1115980:intron 40.0%
! TTTTTATGCGGAGAATAGGG+AGG - chr7_3:63505264-63505283 Msa1115980:intron 40.0%
! TTTTATGCGGAGAATAGGGA+GGG - chr7_3:63505265-63505284 Msa1115980:intron 40.0%
ATGTAGTTGGTCATATTGGG+AGG + chr7_3:63506093-63506112 None:intergenic 40.0%
TCCCAATATGACCAACTACA+TGG - chr7_3:63506092-63506111 Msa1115980:CDS 40.0%
GTCCATGTAGTTGGTCATAT+TGG + chr7_3:63506097-63506116 None:intergenic 40.0%
! AAGAGTGGAGAGTTTGTTCA+TGG + chr7_3:63506133-63506152 None:intergenic 40.0%
TCTCACGAAACTTTCAAGAG+TGG + chr7_3:63506148-63506167 None:intergenic 40.0%
TCTTGAAAGTTTCGTGAGAG+AGG - chr7_3:63506149-63506168 Msa1115980:intron 40.0%
GCGACATGCTATCTATATCA+TGG - chr7_3:63506415-63506434 Msa1115980:CDS 40.0%
!! AGTTTTGTGGTCCCTCTATA+AGG - chr7_3:63506444-63506463 Msa1115980:intron 40.0%
! GTTTTGTGGTCCCTCTATAA+GGG - chr7_3:63506445-63506464 Msa1115980:intron 40.0%
GAAGAAGAATCTGTTGTCCT+TGG - chr7_3:63506521-63506540 Msa1115980:intron 40.0%
! AGGCGTAAAAAGCATAGCAA+AGG - chr7_3:63506741-63506760 Msa1115980:intron 40.0%
CCCATATCTATGTGATGTCA+TGG - chr7_3:63506948-63506967 Msa1115980:intron 40.0%
AGTGCTGTCTTCAAGTCAAA+CGG + chr7_3:63506980-63506999 None:intergenic 40.0%
CAAAAAGGATGTTATGGGGA+AGG + chr7_3:63507010-63507029 None:intergenic 40.0%
TCACACTATATTGTGGTAGC+TGG + chr7_3:63507273-63507292 None:intergenic 40.0%
ATATGATATTGGTGAGGCCT+AGG + chr7_3:63507479-63507498 None:intergenic 40.0%
! AGAAGTCGGTGAACAACTTT+TGG + chr7_3:63507527-63507546 None:intergenic 40.0%
TAAGTAACCGATCGGAACAA+TGG - chr7_3:63507615-63507634 Msa1115980:intron 40.0%
AAGTAACCGATCGGAACAAT+GGG - chr7_3:63507616-63507635 Msa1115980:intron 40.0%
TTGTTTCCCATTGTTCCGAT+CGG + chr7_3:63507625-63507644 None:intergenic 40.0%
CAATGGGAAACAAAAGCTAG+AGG - chr7_3:63507632-63507651 Msa1115980:intron 40.0%
TGCCTTATATGTTGAAGTGC+TGG - chr7_3:63507990-63508009 Msa1115980:intron 40.0%
CACCAGCACTTCAACATATA+AGG + chr7_3:63507995-63508014 None:intergenic 40.0%
TTGGAGACGAAACTGTAACA+AGG + chr7_3:63508131-63508150 None:intergenic 40.0%
AGACACAGACAAAAAGAGGT+TGG + chr7_3:63508150-63508169 None:intergenic 40.0%
GCAAAGACACAGACAAAAAG+AGG + chr7_3:63508154-63508173 None:intergenic 40.0%
!! CAATTTGACTTGATCAGGGA+TGG + chr7_3:63508318-63508337 None:intergenic 40.0%
TCCCTGATCAAGTCAAATTG+TGG - chr7_3:63508318-63508337 Msa1115980:intron 40.0%
GATTCAGACGATGAATGGTT+TGG + chr7_3:63508584-63508603 None:intergenic 40.0%
GATCTGATTCAGACGATGAA+TGG + chr7_3:63508589-63508608 None:intergenic 40.0%
!! GAGTGGTTCTAGTTGAGTAG+TGG + chr7_3:63502276-63502295 None:intergenic 45.0%
CATGTAGTTTCCAAGGACAG+AGG + chr7_3:63502420-63502439 None:intergenic 45.0%
TTCACACCGATAGCATGTTC+AGG - chr7_3:63502916-63502935 Msa1115980:intron 45.0%
TGCAGAAAGGATCTGGTCAA+AGG + chr7_3:63502968-63502987 None:intergenic 45.0%
! GCTTTTCTGCAGAAAGGATC+TGG + chr7_3:63502975-63502994 None:intergenic 45.0%
TCTACATGCATAGGCTGAGA+AGG + chr7_3:63503432-63503451 None:intergenic 45.0%
! GATGATGGCTCTACATGCAT+AGG + chr7_3:63503441-63503460 None:intergenic 45.0%
GCCATCATCGTCCAATTCTA+AGG - chr7_3:63503452-63503471 Msa1115980:intron 45.0%
CTCTTGGATCCACTTGTTTG+CGG + chr7_3:63503598-63503617 None:intergenic 45.0%
CAAACAAGTGGATCCAAGAG+AGG - chr7_3:63503598-63503617 Msa1115980:intron 45.0%
GTACGTGCCTTAACAGCTTT+GGG + chr7_3:63503634-63503653 None:intergenic 45.0%
TGTACGTGCCTTAACAGCTT+TGG + chr7_3:63503635-63503654 None:intergenic 45.0%
CTAGTTTCTCCGCAAACAAG+TGG - chr7_3:63503782-63503801 Msa1115980:intron 45.0%
CTCTTGGATCCACTTGTTTG+CGG + chr7_3:63503598-63503617 None:intergenic 45.0%
CAAACAAGTGGATCCAAGAG+AGG - chr7_3:63503598-63503617 Msa1115980:intron 45.0%
GTACGTGCCTTAACAGCTTT+GGG + chr7_3:63503634-63503653 None:intergenic 45.0%
TGTACGTGCCTTAACAGCTT+TGG + chr7_3:63503635-63503654 None:intergenic 45.0%
GCGAGAGAAAAATCATGGCA+AGG - chr7_3:63504081-63504100 Msa1115980:intron 45.0%
GAGAAGCAGCTAGAAAAAGC+AGG - chr7_3:63504356-63504375 Msa1115980:intron 45.0%
CAGCTAGAAAAAGCAGGCTT+AGG - chr7_3:63504362-63504381 Msa1115980:intron 45.0%
! TTTGGTGGAGGTGCAATGTT+GGG - chr7_3:63504682-63504701 Msa1115980:intron 45.0%
TGTTCGACGTGGAATATGCA+AGG - chr7_3:63504832-63504851 Msa1115980:CDS 45.0%
GAACGTTGCTTCATGTGGAT+TGG - chr7_3:63505044-63505063 Msa1115980:intron 45.0%
GACCAACTACATGGACCAAA+TGG - chr7_3:63506101-63506120 Msa1115980:CDS 45.0%
! TGCCATTTGGTCCATGTAGT+TGG + chr7_3:63506106-63506125 None:intergenic 45.0%
ACTACATGGACCAAATGGCA+AGG - chr7_3:63506106-63506125 Msa1115980:CDS 45.0%
CTACATGGACCAAATGGCAA+GGG - chr7_3:63506107-63506126 Msa1115980:CDS 45.0%
CAAGTCATGGCCCTTATAGA+GGG + chr7_3:63506458-63506477 None:intergenic 45.0%
TCAAGTCATGGCCCTTATAG+AGG + chr7_3:63506459-63506478 None:intergenic 45.0%
AGAATCTGTTGTCCTTGGGT+AGG - chr7_3:63506526-63506545 Msa1115980:intron 45.0%
GAATCTGTTGTCCTTGGGTA+GGG - chr7_3:63506527-63506546 Msa1115980:intron 45.0%
GATGGAAGGAGTAGTTCATG+GGG + chr7_3:63506568-63506587 None:intergenic 45.0%
GGATGGAAGGAGTAGTTCAT+GGG + chr7_3:63506569-63506588 None:intergenic 45.0%
TGGATGGAAGGAGTAGTTCA+TGG + chr7_3:63506570-63506589 None:intergenic 45.0%
CACATAGATATGGGGCTAGA+GGG + chr7_3:63506942-63506961 None:intergenic 45.0%
TCACATAGATATGGGGCTAG+AGG + chr7_3:63506943-63506962 None:intergenic 45.0%
CGATCACTGTAGTGATAGGA+AGG - chr7_3:63508368-63508387 Msa1115980:intron 45.0%
!! AGCAAGGTGTTTTCTTGCCA+TGG - chr7_3:63508626-63508645 Msa1115980:CDS 45.0%
AACTCAATGCTCGCATACGA+TGG + chr7_3:63508662-63508681 None:intergenic 45.0%
! AGCATTGAGTTCTCTGTGGA+TGG - chr7_3:63508671-63508690 Msa1115980:CDS 45.0%
!! CTATATATTAATTAAAAATA+AGG - chr7_3:63507918-63507937 Msa1115980:intron 5.0%
!! TGATGATGACGGTGTTGAGG+TGG + chr7_3:63502302-63502321 None:intergenic 50.0%
TCTTCATCACCCTCTGTCCT+TGG - chr7_3:63502407-63502426 Msa1115980:intron 50.0%
AGAGCCACCCAAAGCTGTTA+AGG - chr7_3:63503624-63503643 Msa1115980:intron 50.0%
AGAGCCACCCAAAGCTGTTA+AGG - chr7_3:63503624-63503643 Msa1115980:intron 50.0%
TAGGGCATGTTCTTTGGTGG+AGG - chr7_3:63504670-63504689 Msa1115980:intron 50.0%
! CTTTGGTGGAGGTGCAATGT+TGG - chr7_3:63504681-63504700 Msa1115980:intron 50.0%
GCAATGTTGGGAGGAGAACA+AGG - chr7_3:63504694-63504713 Msa1115980:intron 50.0%
AGAGATCACACCTGAGCTGA+TGG + chr7_3:63504737-63504756 None:intergenic 50.0%
TCGACGTGGAATATGCAAGG+TGG - chr7_3:63504835-63504854 Msa1115980:CDS 50.0%
GGAATATGCAAGGTGGCTTG+AGG - chr7_3:63504842-63504861 Msa1115980:CDS 50.0%
!! CGTTGCTTCATGTGGATTGG+TGG - chr7_3:63505047-63505066 Msa1115980:intron 50.0%
GGAGAAGATGCTCTCTCTCA+AGG - chr7_3:63506009-63506028 Msa1115980:CDS 50.0%
TGCTCTCTCTCAAGGACTTG+AGG - chr7_3:63506017-63506036 Msa1115980:CDS 50.0%
TGTTCATGGCCCTTGCCATT+TGG + chr7_3:63506119-63506138 None:intergenic 50.0%
!! TGATTTCGTGGGGGTACTAC+TGG - chr7_3:63506494-63506513 Msa1115980:intron 50.0%
!! GATTTCGTGGGGGTACTACT+GGG - chr7_3:63506495-63506514 Msa1115980:intron 50.0%
AGTTCATGGGGTTGTGTGGT+AGG + chr7_3:63506556-63506575 None:intergenic 50.0%
GAGTAGTTCATGGGGTTGTG+TGG + chr7_3:63506560-63506579 None:intergenic 50.0%
ATCAGGGATGGAAACCCTAG+AGG + chr7_3:63508306-63508325 None:intergenic 50.0%
!! ACGATGGAAGTACTCAGCCA+TGG + chr7_3:63508646-63508665 None:intergenic 50.0%
!! TGCGAGCATTGAGTTCTCTG+TGG - chr7_3:63508667-63508686 Msa1115980:CDS 50.0%
! GATGACGGTGTTGAGGTGGT+GGG + chr7_3:63502298-63502317 None:intergenic 55.0%
!! TGATGACGGTGTTGAGGTGG+TGG + chr7_3:63502299-63502318 None:intergenic 55.0%
!! CGTGCCTTAACAGCTTTGGG+TGG + chr7_3:63503631-63503650 None:intergenic 55.0%
!! CGTGCCTTAACAGCTTTGGG+TGG + chr7_3:63503631-63503650 None:intergenic 55.0%
AGAGGCTGCAATGTTCGACG+TGG - chr7_3:63504821-63504840 Msa1115980:CDS 55.0%
GCGGAGAATAGGGAGGGAAA+TGG - chr7_3:63505271-63505290 Msa1115980:intron 55.0%
GTGGTAGGTTTCCCTACCCA+AGG + chr7_3:63506541-63506560 None:intergenic 55.0%
! TTGCTGCTTGACGCGTCGTT+AGG + chr7_3:63508611-63508630 None:intergenic 55.0%
TAACGACGCGTCAAGCAGCA+AGG - chr7_3:63508610-63508629 Msa1115980:CDS 55.0%
!! GGGTGGCTCTGATCCTCTCT+TGG + chr7_3:63503614-63503633 None:intergenic 60.0%
!! GGGTGGCTCTGATCCTCTCT+TGG + chr7_3:63503614-63503633 None:intergenic 60.0%
! GGTGGAGGTGCAATGTTGGG+AGG - chr7_3:63504685-63504704 Msa1115980:intron 60.0%
!! TCGTGGGGGTACTACTGGGT+AGG - chr7_3:63506499-63506518 Msa1115980:intron 60.0%
!! CGGTGTTGAGGTGGTGGGAG+TGG + chr7_3:63502293-63502312 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 63502242 63508713 63502242 ID=Msa1115980;Name=Msa1115980
chr7_3 mRNA 63502242 63508713 63502242 ID=Msa1115980-mRNA-1;Parent=Msa1115980;Name=Msa1115980-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.09|0|1|0.72|0.58|12|0|460
chr7_3 exon 63508517 63508713 63508517 ID=Msa1115980-mRNA-1:exon:14940;Parent=Msa1115980-mRNA-1
chr7_3 exon 63508188 63508291 63508188 ID=Msa1115980-mRNA-1:exon:14939;Parent=Msa1115980-mRNA-1
chr7_3 exon 63507482 63507570 63507482 ID=Msa1115980-mRNA-1:exon:14938;Parent=Msa1115980-mRNA-1
chr7_3 exon 63507316 63507381 63507316 ID=Msa1115980-mRNA-1:exon:14937;Parent=Msa1115980-mRNA-1
chr7_3 exon 63506802 63506873 63506802 ID=Msa1115980-mRNA-1:exon:14936;Parent=Msa1115980-mRNA-1
chr7_3 exon 63506565 63506624 63506565 ID=Msa1115980-mRNA-1:exon:14935;Parent=Msa1115980-mRNA-1
chr7_3 exon 63506367 63506441 63506367 ID=Msa1115980-mRNA-1:exon:14934;Parent=Msa1115980-mRNA-1
chr7_3 exon 63506210 63506282 63506210 ID=Msa1115980-mRNA-1:exon:14933;Parent=Msa1115980-mRNA-1
chr7_3 exon 63505987 63506132 63505987 ID=Msa1115980-mRNA-1:exon:14932;Parent=Msa1115980-mRNA-1
chr7_3 exon 63505861 63505971 63505861 ID=Msa1115980-mRNA-1:exon:14931;Parent=Msa1115980-mRNA-1
chr7_3 exon 63504785 63505024 63504785 ID=Msa1115980-mRNA-1:exon:14930;Parent=Msa1115980-mRNA-1
chr7_3 exon 63502242 63502391 63502242 ID=Msa1115980-mRNA-1:exon:14929;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63508517 63508713 63508517 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63508188 63508291 63508188 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63507482 63507570 63507482 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63507316 63507381 63507316 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63506802 63506873 63506802 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63506565 63506624 63506565 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63506367 63506441 63506367 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63506210 63506282 63506210 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63505987 63506132 63505987 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63505861 63505971 63505861 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63504785 63505024 63504785 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
chr7_3 CDS 63502242 63502391 63502242 ID=Msa1115980-mRNA-1:cds;Parent=Msa1115980-mRNA-1
Gene Sequence

>Msa1115980

ATGGCTTCCAGTGTTGAAAAACCAAACCAAACCACTACTCAACTAGAACCACTCCCACCACCTCAACACCGTCATCATCAAATTCATCATCAACAACATAAACCACAACATCATCATCATCCAATACATGATCATAATCAAATTTCTTTTGGAATGATGCAATCTTCTTCATCACCCTCTGTCCTTGGAAACTACATCAGAAATAAAGATTCGGGAGCTTATGATTTGGGTGAATTGGATCAAGCCCTTTTTCTCTATCTTAATGGACAAACTGACCCATCCAGTGTTCAAGACCAAAAACAAAATTCAACATCAGGAATGAGGCCACCAACTCTCAACATTTTTCCTTCTCAGCCTATGCATGTAGAGCCATCATCGTCCAATTCTAAGGCTAGCATGGAGTTAGTTTCTCCGCAAACAAGTGGATCCAAGAGAGGATCAGAGCCACCCAAAGCTCGAGAGAAAAATCATGGCAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCTAAGATACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGCTTAGGAAAAAGGCATATATACAACAGCTTGAGTCAAGCAGAATCAAACTTAATCAGATGGAACAGGAGCTACATGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAATGTTGGGAGGAGAACAAGGCCTTCCTTCTATGAATACCATCAGCTCAGAGGCTGCAATGTTCGACGTGGAATATGCAAGGTGGCTTGAGGAGCACCACCGTTTAGTATGTGAACTAAGAGCTGCAGTTCATGAGCACATTCCTGAGAATGAGCTTAGAATGTTTGTGGACAAATTCTTGGCTCAATATGATCAAAGCTTAGTTGCAAAAGCAGATATATTTCATCTTGTTTCTGGCATGTGGGTTACCCCAATTGAACGTTGCTTCATGTGGATTGGTGGATTTAAGCCTTCTGAACTCATTAAGATCATTGTGAGTCAAATTGAACCATTGACCGAGCAACAAATAATGGGCATATATGGATTGCAACAATCTACACAACAGGGAGAAGATGCTCTCTCTCAAGGACTTGAGGCTCTCAATCAAAATCTTTCTGAAACTATAACATCAGATTCATTGAGCTATCCTCCCAATATGACCAACTACATGGACCAAATGGCAAGGGCCATGAACAAACTCTCCACTCTTGAAAGTTTCGTGAGAGAGGCAGATAATCTACGACACCAAACCATTCATCGTCTGAATCAGATCCTAACGACGCGTCAAGCAGCAAGGTGTTTTCTTGCCATGGCTGAGTACTTCCATCGTATGCGAGCATTGAGTTCTCTGTGGATGGCACGCCCTCGTCAAGAATAG

Protein sequence

>Msa1115980

MASSVEKPNQTTTQLEPLPPPQHRHHQIHHQQHKPQHHHHPIHDHNQISFGMMQSSSSPSVLGNYIRNKDSGAYDLGELDQALFLYLNGQTDPSSVQDQKQNSTSGMRPPTLNIFPSQPMHVEPSSSNSKASMELVSPQTSGSKRGSEPPKAREKNHGKGPTSSSEHEGPKTPDPKILRRLAQNREAARKSRLRKKAYIQQLESSRIKLNQMEQELHARNQGMFFGGGAMLGGEQGLPSMNTISSEAAMFDVEYARWLEEHHRLVCELRAAVHEHIPENELRMFVDKFLAQYDQSLVAKADIFHLVSGMWVTPIERCFMWIGGFKPSELIKIIVSQIEPLTEQQIMGIYGLQQSTQQGEDALSQGLEALNQNLSETITSDSLSYPPNMTNYMDQMARAMNKLSTLESFVREADNLRHQTIHRLNQILTTRQAARCFLAMAEYFHRMRALSSLWMARPRQE*