Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109810 | XP_003623546.1 | 93.130 | 131 | 9 | 0 | 6 | 136 | 82 | 212 | 4.10e-86 | 260 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109810 | sp|Q9LZX1|LOR15_ARATH | 62.903 | 124 | 46 | 0 | 6 | 129 | 88 | 211 | 7.41e-58 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109810 | G7KW28 | 93.130 | 131 | 9 | 0 | 6 | 136 | 82 | 212 | 1.96e-86 | 260 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa1109810 | 0.838827 | 2.281293e-57 | -8.615850e-47 |
| Msa0002250 | Msa1109810 | 0.820838 | 5.552269e-53 | -8.615850e-47 |
| Msa0004480 | Msa1109810 | 0.821809 | 3.314561e-53 | -8.615850e-47 |
| Msa0006060 | Msa1109810 | 0.814117 | 1.814266e-51 | -8.615850e-47 |
| Msa0015090 | Msa1109810 | 0.825992 | 3.463767e-54 | -8.615850e-47 |
| Msa0026630 | Msa1109810 | 0.862463 | 4.980068e-64 | -8.615850e-47 |
| Msa0032080 | Msa1109810 | 0.809850 | 1.543451e-50 | -8.615850e-47 |
| Msa0043850 | Msa1109810 | 0.857656 | 1.406697e-62 | -8.615850e-47 |
| Msa0049750 | Msa1109810 | 0.821424 | 4.068084e-53 | -8.615850e-47 |
| Msa0055640 | Msa1109810 | 0.807707 | 4.432667e-50 | -8.615850e-47 |
| Msa0059900 | Msa1109810 | 0.816937 | 4.274453e-52 | -8.615850e-47 |
| Msa0060070 | Msa1109810 | 0.804025 | 2.632827e-49 | -8.615850e-47 |
| Msa0061220 | Msa1109810 | 0.838944 | 2.127810e-57 | -8.615850e-47 |
| Msa0071250 | Msa1109810 | 0.809968 | 1.455840e-50 | -8.615850e-47 |
| Msa0077370 | Msa1109810 | 0.845405 | 4.144654e-59 | -8.615850e-47 |
| Msa0077380 | Msa1109810 | 0.800562 | 1.359825e-48 | -8.615850e-47 |
| Msa0082420 | Msa1109810 | 0.837330 | 5.538868e-57 | -8.615850e-47 |
| Msa0090380 | Msa1109810 | 0.812314 | 4.513004e-51 | -8.615850e-47 |
| Msa0090510 | Msa1109810 | 0.854982 | 8.559689e-62 | -8.615850e-47 |
| Msa0092410 | Msa1109810 | 0.805496 | 1.298260e-49 | -8.615850e-47 |
| Msa0094710 | Msa1109810 | 0.801426 | 9.054724e-49 | -8.615850e-47 |
| Msa0098290 | Msa1109810 | 0.801027 | 1.092559e-48 | -8.615850e-47 |
| Msa0101960 | Msa1109810 | 0.803140 | 4.017626e-49 | -8.615850e-47 |
| Msa0117520 | Msa1109810 | 0.856061 | 4.149526e-62 | -8.615850e-47 |
| Msa0118540 | Msa1109810 | 0.813167 | 2.935769e-51 | -8.615850e-47 |
| Msa0119440 | Msa1109810 | 0.809202 | 2.125628e-50 | -8.615850e-47 |
| Msa0604290 | Msa1109810 | 0.837010 | 6.689139e-57 | -8.615850e-47 |
| Msa0606080 | Msa1109810 | 0.810222 | 1.283447e-50 | -8.615850e-47 |
| Msa0613340 | Msa1109810 | 0.802232 | 6.184872e-49 | -8.615850e-47 |
| Msa0631320 | Msa1109810 | 0.829820 | 4.156929e-55 | -8.615850e-47 |
| Msa0641130 | Msa1109810 | 0.869948 | 2.111058e-66 | -8.615850e-47 |
| Msa0645530 | Msa1109810 | 0.820270 | 7.494246e-53 | -8.615850e-47 |
| Msa0647030 | Msa1109810 | 0.803823 | 2.900324e-49 | -8.615850e-47 |
| Msa0654900 | Msa1109810 | 0.812079 | 5.078669e-51 | -8.615850e-47 |
| Msa0657120 | Msa1109810 | 0.816055 | 6.735444e-52 | -8.615850e-47 |
| Msa0672550 | Msa1109810 | 0.807987 | 3.863508e-50 | -8.615850e-47 |
| Msa0679670 | Msa1109810 | 0.843254 | 1.568676e-58 | -8.615850e-47 |
| Msa0685090 | Msa1109810 | 0.817030 | 4.073493e-52 | -8.615850e-47 |
| Msa0697680 | Msa1109810 | 0.816593 | 5.105359e-52 | -8.615850e-47 |
| Msa0698450 | Msa1109810 | 0.823241 | 1.539630e-53 | -8.615850e-47 |
| Msa0698460 | Msa1109810 | 0.837421 | 5.249922e-57 | -8.615850e-47 |
| Msa0701100 | Msa1109810 | 0.813596 | 2.362206e-51 | -8.615850e-47 |
| Msa0703810 | Msa1109810 | 0.828988 | 6.619206e-55 | -8.615850e-47 |
| Msa0705990 | Msa1109810 | 0.827731 | 1.330894e-54 | -8.615850e-47 |
| Msa0709120 | Msa1109810 | 0.845305 | 4.411477e-59 | -8.615850e-47 |
| Msa0724370 | Msa1109810 | 0.829867 | 4.047804e-55 | -8.615850e-47 |
| Msa0734940 | Msa1109810 | 0.814364 | 1.599774e-51 | -8.615850e-47 |
| Msa0735550 | Msa1109810 | 0.812627 | 3.854332e-51 | -8.615850e-47 |
| Msa0743870 | Msa1109810 | 0.826654 | 2.409047e-54 | -8.615850e-47 |
| Msa0744640 | Msa1109810 | 0.801888 | 7.279282e-49 | -8.615850e-47 |
| Msa0750810 | Msa1109810 | 0.800626 | 1.319327e-48 | -8.615850e-47 |
| Msa0764920 | Msa1109810 | 0.834395 | 3.072557e-56 | -8.615850e-47 |
| Msa0769720 | Msa1109810 | 0.809198 | 2.130276e-50 | -8.615850e-47 |
| Msa0772740 | Msa1109810 | 0.805851 | 1.093525e-49 | -8.615850e-47 |
| Msa0775560 | Msa1109810 | 0.823578 | 1.284207e-53 | -8.615850e-47 |
| Msa0787790 | Msa1109810 | 0.815077 | 1.112242e-51 | -8.615850e-47 |
| Msa0795340 | Msa1109810 | 0.816667 | 4.913218e-52 | -8.615850e-47 |
| Msa0796580 | Msa1109810 | -0.801233 | 9.919802e-49 | -8.615850e-47 |
| Msa0803520 | Msa1109810 | 0.811349 | 7.318267e-51 | -8.615850e-47 |
| Msa0812950 | Msa1109810 | 0.855677 | 5.373100e-62 | -8.615850e-47 |
| Msa0823540 | Msa1109810 | 0.825380 | 4.839056e-54 | -8.615850e-47 |
| Msa0831130 | Msa1109810 | 0.807808 | 4.219000e-50 | -8.615850e-47 |
| Msa0832620 | Msa1109810 | 0.805160 | 1.526585e-49 | -8.615850e-47 |
| Msa0841730 | Msa1109810 | 0.802889 | 4.528150e-49 | -8.615850e-47 |
| Msa0136630 | Msa1109810 | 0.841747 | 3.938336e-58 | -8.615850e-47 |
| Msa0137860 | Msa1109810 | 0.807980 | 3.876553e-50 | -8.615850e-47 |
| Msa0137980 | Msa1109810 | 0.846178 | 2.556668e-59 | -8.615850e-47 |
| Msa0138020 | Msa1109810 | 0.805321 | 1.412216e-49 | -8.615850e-47 |
| Msa0138900 | Msa1109810 | 0.861267 | 1.156503e-63 | -8.615850e-47 |
| Msa0139670 | Msa1109810 | 0.844614 | 6.777303e-59 | -8.615850e-47 |
| Msa0144530 | Msa1109810 | 0.808652 | 2.788372e-50 | -8.615850e-47 |
| Msa0152560 | Msa1109810 | 0.815382 | 9.513808e-52 | -8.615850e-47 |
| Msa0160960 | Msa1109810 | 0.831870 | 1.306066e-55 | -8.615850e-47 |
| Msa0170000 | Msa1109810 | 0.834320 | 3.209016e-56 | -8.615850e-47 |
| Msa0176260 | Msa1109810 | 0.823314 | 1.481044e-53 | -8.615850e-47 |
| Msa0183910 | Msa1109810 | 0.850592 | 1.536619e-60 | -8.615850e-47 |
| Msa0187310 | Msa1109810 | 0.815745 | 7.898975e-52 | -8.615850e-47 |
| Msa0196670 | Msa1109810 | 0.822526 | 2.259700e-53 | -8.615850e-47 |
| Msa0196880 | Msa1109810 | 0.815079 | 1.110774e-51 | -8.615850e-47 |
| Msa0198730 | Msa1109810 | 0.828872 | 7.061876e-55 | -8.615850e-47 |
| Msa0213430 | Msa1109810 | 0.834763 | 2.483409e-56 | -8.615850e-47 |
| Msa0213540 | Msa1109810 | 0.820344 | 7.207628e-53 | -8.615850e-47 |
| Msa0213550 | Msa1109810 | 0.815395 | 9.452804e-52 | -8.615850e-47 |
| Msa0220750 | Msa1109810 | 0.802209 | 6.252860e-49 | -8.615850e-47 |
| Msa0224130 | Msa1109810 | 0.852682 | 3.933747e-61 | -8.615850e-47 |
| Msa0227360 | Msa1109810 | 0.823181 | 1.590349e-53 | -8.615850e-47 |
| Msa0233370 | Msa1109810 | 0.827378 | 1.617568e-54 | -8.615850e-47 |
| Msa0364790 | Msa1109810 | 0.844633 | 6.700554e-59 | -8.615850e-47 |
| Msa0365950 | Msa1109810 | 0.833211 | 6.075530e-56 | -8.615850e-47 |
| Msa0380600 | Msa1109810 | 0.840553 | 8.113266e-58 | -8.615850e-47 |
| Msa0382370 | Msa1109810 | 0.805102 | 1.569610e-49 | -8.615850e-47 |
| Msa0388730 | Msa1109810 | 0.825114 | 5.592203e-54 | -8.615850e-47 |
| Msa0389210 | Msa1109810 | 0.807241 | 5.563857e-50 | -8.615850e-47 |
| Msa0403490 | Msa1109810 | 0.828097 | 1.086634e-54 | -8.615850e-47 |
| Msa0403770 | Msa1109810 | 0.816812 | 4.559168e-52 | -8.615850e-47 |
| Msa0412260 | Msa1109810 | 0.815842 | 7.514745e-52 | -8.615850e-47 |
| Msa0413870 | Msa1109810 | 0.814801 | 1.280157e-51 | -8.615850e-47 |
| Msa0418400 | Msa1109810 | 0.816341 | 5.812569e-52 | -8.615850e-47 |
| Msa0427580 | Msa1109810 | 0.832115 | 1.136451e-55 | -8.615850e-47 |
| Msa0428200 | Msa1109810 | 0.831419 | 1.687218e-55 | -8.615850e-47 |
| Msa0430240 | Msa1109810 | 0.837459 | 5.134512e-57 | -8.615850e-47 |
| Msa0456770 | Msa1109810 | 0.833140 | 6.325651e-56 | -8.615850e-47 |
| Msa0472770 | Msa1109810 | 0.804766 | 1.845017e-49 | -8.615850e-47 |
| Msa0985180 | Msa1109810 | 0.808650 | 2.790580e-50 | -8.615850e-47 |
| Msa0994370 | Msa1109810 | 0.825994 | 3.458969e-54 | -8.615850e-47 |
| Msa0994910 | Msa1109810 | 0.823480 | 1.353790e-53 | -8.615850e-47 |
| Msa1011250 | Msa1109810 | 0.806453 | 8.165844e-50 | -8.615850e-47 |
| Msa1013070 | Msa1109810 | 0.840975 | 6.288059e-58 | -8.615850e-47 |
| Msa1016960 | Msa1109810 | 0.824084 | 9.776906e-54 | -8.615850e-47 |
| Msa1023310 | Msa1109810 | 0.833652 | 4.716873e-56 | -8.615850e-47 |
| Msa1024680 | Msa1109810 | 0.806471 | 8.093744e-50 | -8.615850e-47 |
| Msa1029520 | Msa1109810 | 0.814192 | 1.745735e-51 | -8.615850e-47 |
| Msa1031460 | Msa1109810 | 0.801225 | 9.954719e-49 | -8.615850e-47 |
| Msa1034590 | Msa1109810 | 0.809055 | 2.285942e-50 | -8.615850e-47 |
| Msa1042660 | Msa1109810 | 0.806599 | 7.606281e-50 | -8.615850e-47 |
| Msa1044510 | Msa1109810 | 0.805045 | 1.613755e-49 | -8.615850e-47 |
| Msa1054510 | Msa1109810 | 0.835476 | 1.641571e-56 | -8.615850e-47 |
| Msa1058200 | Msa1109810 | 0.823546 | 1.306649e-53 | -8.615850e-47 |
| Msa1059670 | Msa1109810 | 0.831765 | 1.386602e-55 | -8.615850e-47 |
| Msa1062040 | Msa1109810 | 0.872599 | 2.809085e-67 | -8.615850e-47 |
| Msa1063360 | Msa1109810 | 0.806369 | 8.507318e-50 | -8.615850e-47 |
| Msa1063420 | Msa1109810 | 0.804603 | 1.995708e-49 | -8.615850e-47 |
| Msa1066810 | Msa1109810 | 0.802677 | 5.008149e-49 | -8.615850e-47 |
| Msa1070540 | Msa1109810 | 0.832750 | 7.911790e-56 | -8.615850e-47 |
| Msa1074350 | Msa1109810 | 0.811137 | 8.138898e-51 | -8.615850e-47 |
| Msa1082360 | Msa1109810 | 0.862717 | 4.157449e-64 | -8.615850e-47 |
| Msa1089190 | Msa1109810 | 0.822061 | 2.897629e-53 | -8.615850e-47 |
| Msa1094280 | Msa1109810 | 0.833552 | 4.994824e-56 | -8.615850e-47 |
| Msa1101240 | Msa1109810 | 0.829600 | 4.700869e-55 | -8.615850e-47 |
| Msa0240270 | Msa1109810 | 0.827509 | 1.504683e-54 | -8.615850e-47 |
| Msa0241480 | Msa1109810 | 0.843377 | 1.454589e-58 | -8.615850e-47 |
| Msa0256390 | Msa1109810 | 0.821745 | 3.428163e-53 | -8.615850e-47 |
| Msa0264680 | Msa1109810 | 0.821293 | 4.362065e-53 | -8.615850e-47 |
| Msa0265270 | Msa1109810 | 0.845482 | 3.950886e-59 | -8.615850e-47 |
| Msa0269560 | Msa1109810 | 0.811620 | 6.392249e-51 | -8.615850e-47 |
| Msa0276430 | Msa1109810 | 0.855589 | 5.701846e-62 | -8.615850e-47 |
| Msa0278580 | Msa1109810 | 0.802199 | 6.284657e-49 | -8.615850e-47 |
| Msa0279430 | Msa1109810 | 0.832344 | 9.975300e-56 | -8.615850e-47 |
| Msa0302730 | Msa1109810 | 0.844460 | 7.457559e-59 | -8.615850e-47 |
| Msa0302840 | Msa1109810 | 0.824132 | 9.524545e-54 | -8.615850e-47 |
| Msa0316470 | Msa1109810 | 0.826961 | 2.035128e-54 | -8.615850e-47 |
| Msa0317960 | Msa1109810 | 0.802178 | 6.344774e-49 | -8.615850e-47 |
| Msa0319020 | Msa1109810 | 0.883743 | 3.465531e-71 | -8.615850e-47 |
| Msa0321690 | Msa1109810 | 0.815192 | 1.048521e-51 | -8.615850e-47 |
| Msa0331020 | Msa1109810 | 0.849963 | 2.307015e-60 | -8.615850e-47 |
| Msa1107200 | Msa1109810 | 0.867284 | 1.532925e-65 | -8.615850e-47 |
| Msa1107260 | Msa1109810 | 0.803072 | 4.149711e-49 | -8.615850e-47 |
| Msa1108710 | Msa1109810 | 0.823553 | 1.302239e-53 | -8.615850e-47 |
| Msa1109810 | Msa1113100 | 0.806826 | 6.813490e-50 | -8.615850e-47 |
| Msa1109810 | Msa1128270 | 0.803123 | 4.050646e-49 | -8.615850e-47 |
| Msa1109810 | Msa1150780 | 0.855915 | 4.579571e-62 | -8.615850e-47 |
| Msa1109810 | Msa1158390 | 0.819688 | 1.018337e-52 | -8.615850e-47 |
| Msa1109810 | Msa1168640 | 0.803658 | 3.137908e-49 | -8.615850e-47 |
| Msa1109810 | Msa1171140 | 0.807294 | 5.423008e-50 | -8.615850e-47 |
| Msa1109810 | Msa1180720 | 0.808822 | 2.564393e-50 | -8.615850e-47 |
| Msa1109810 | Msa1183140 | 0.859834 | 3.143172e-63 | -8.615850e-47 |
| Msa1109810 | Msa1184690 | 0.808697 | 2.726605e-50 | -8.615850e-47 |
| Msa1109810 | Msa1184780 | 0.824024 | 1.009543e-53 | -8.615850e-47 |
| Msa1109810 | Msa1185460 | 0.800497 | 1.401644e-48 | -8.615850e-47 |
| Msa1109810 | Msa1188350 | 0.821954 | 3.066839e-53 | -8.615850e-47 |
| Msa1109810 | Msa1206270 | 0.834560 | 2.792371e-56 | -8.615850e-47 |
| Msa1109810 | Msa1206290 | 0.812908 | 3.345781e-51 | -8.615850e-47 |
| Msa1109810 | Msa1208370 | 0.828796 | 7.364641e-55 | -8.615850e-47 |
| Msa1109810 | Msa1208380 | 0.817981 | 2.487053e-52 | -8.615850e-47 |
| Msa1109810 | Msa1208990 | 0.810951 | 8.929682e-51 | -8.615850e-47 |
| Msa1109810 | Msa1209190 | 0.820206 | 7.751989e-53 | -8.615850e-47 |
| Msa1109810 | Msa1209860 | 0.807832 | 4.168403e-50 | -8.615850e-47 |
| Msa1109810 | Msa1212050 | 0.815325 | 9.796138e-52 | -8.615850e-47 |
| Msa1109810 | Msa1212130 | 0.811405 | 7.119160e-51 | -8.615850e-47 |
| Msa1109810 | Msa1214170 | 0.835103 | 2.039300e-56 | -8.615850e-47 |
| Msa1109810 | Msa1218160 | 0.842272 | 2.862210e-58 | -8.615850e-47 |
| Msa1109810 | Msa1221330 | 0.828320 | 9.598541e-55 | -8.615850e-47 |
| Msa1109810 | Msa1225580 | 0.829955 | 3.852401e-55 | -8.615850e-47 |
| Msa1109810 | Msa1229480 | 0.880545 | 5.027445e-70 | -8.615850e-47 |
| Msa1109810 | Msa1234620 | 0.830169 | 3.416234e-55 | -8.615850e-47 |
| Msa1109810 | Msa1236470 | 0.804861 | 1.763075e-49 | -8.615850e-47 |
| Msa1109810 | Msa1238680 | 0.806012 | 1.011546e-49 | -8.615850e-47 |
| Msa1109810 | Msa1252810 | 0.807562 | 4.757384e-50 | -8.615850e-47 |
| Msa1109810 | Msa1256810 | 0.825209 | 5.310864e-54 | -8.615850e-47 |
| Msa1109810 | Msa1259860 | 0.814296 | 1.655842e-51 | -8.615850e-47 |
| Msa1109810 | Msa1270660 | 0.817561 | 3.093209e-52 | -8.615850e-47 |
| Msa1109810 | Msa1270730 | 0.816399 | 5.642753e-52 | -8.615850e-47 |
| Msa1109810 | Msa1272010 | 0.865095 | 7.569075e-65 | -8.615850e-47 |
| Msa1109810 | Msa1274380 | 0.811397 | 7.146809e-51 | -8.615850e-47 |
| Msa1109810 | Msa1275510 | 0.800576 | 1.350657e-48 | -8.615850e-47 |
| Msa1109810 | Msa1277780 | 0.818128 | 2.304388e-52 | -8.615850e-47 |
| Msa1109810 | Msa1280170 | 0.829248 | 5.724418e-55 | -8.615850e-47 |
| Msa1109810 | Msa1285200 | 0.810573 | 1.077919e-50 | -8.615850e-47 |
| Msa1109810 | Msa1286210 | 0.816600 | 5.087070e-52 | -8.615850e-47 |
| Msa1109810 | Msa1286220 | 0.801731 | 7.841690e-49 | -8.615850e-47 |
| Msa1109810 | Msa1298010 | 0.806630 | 7.492473e-50 | -8.615850e-47 |
| Msa1109810 | Msa1307160 | 0.811904 | 5.542855e-51 | -8.615850e-47 |
| Msa1109810 | Msa1307180 | 0.824619 | 7.316435e-54 | -8.615850e-47 |
| Msa1109810 | Msa1309760 | 0.855592 | 5.690233e-62 | -8.615850e-47 |
| Msa1109810 | Msa1309870 | 0.824553 | 7.583879e-54 | -8.615850e-47 |
| Msa1109810 | Msa1312440 | 0.816736 | 4.740761e-52 | -8.615850e-47 |
| Msa1109810 | Msa1316360 | 0.827967 | 1.167479e-54 | -8.615850e-47 |
| Msa1109810 | Msa1316460 | 0.817628 | 2.987787e-52 | -8.615850e-47 |
| Msa1109810 | Msa1332050 | 0.823703 | 1.200801e-53 | -8.615850e-47 |
| Msa1109810 | Msa1335230 | 0.829776 | 4.260098e-55 | -8.615850e-47 |
| Msa1109810 | Msa1349950 | 0.812942 | 3.288554e-51 | -8.615850e-47 |
| Msa1109810 | Msa1351260 | 0.801987 | 6.946144e-49 | -8.615850e-47 |
| Msa1109810 | Msa1352660 | 0.842515 | 2.467430e-58 | -8.615850e-47 |
| Msa1109810 | Msa1355510 | 0.823667 | 1.224277e-53 | -8.615850e-47 |
| Msa1109810 | Msa1355890 | 0.817774 | 2.769130e-52 | -8.615850e-47 |
| Msa1109810 | Msa1358090 | 0.802705 | 4.941496e-49 | -8.615850e-47 |
| Msa1109810 | Msa1360020 | 0.831673 | 1.461246e-55 | -8.615850e-47 |
| Msa1109810 | Msa1364080 | 0.840777 | 7.088579e-58 | -8.615850e-47 |
| Msa1109810 | Msa1368360 | 0.805302 | 1.425394e-49 | -8.615850e-47 |
| Msa1109810 | Msa1369920 | -0.842055 | 3.266575e-58 | -8.615850e-47 |
| Msa1109810 | Msa1370590 | 0.815966 | 7.049997e-52 | -8.615850e-47 |
| Msa1109810 | Msa1382020 | 0.810524 | 1.104536e-50 | -8.615850e-47 |
| Msa1109810 | Msa1384100 | 0.821011 | 5.064555e-53 | -8.615850e-47 |
| Msa1109810 | Msa1386890 | 0.812310 | 4.520283e-51 | -8.615850e-47 |
| Msa1109810 | Msa1389640 | 0.835786 | 1.370370e-56 | -8.615850e-47 |
| Msa1109810 | Msa1400930 | 0.820742 | 5.840697e-53 | -8.615850e-47 |
| Msa1109810 | Msa1407760 | 0.847756 | 9.456407e-60 | -8.615850e-47 |
| Msa1109810 | Msa1407880 | 0.805990 | 1.022225e-49 | -8.615850e-47 |
| Msa1109810 | Msa1419840 | 0.805147 | 1.536044e-49 | -8.615850e-47 |
| Msa1109810 | Msa1421210 | 0.812558 | 3.990689e-51 | -8.615850e-47 |
| Msa1109810 | Msa1422810 | 0.806193 | 9.264116e-50 | -8.615850e-47 |
| Msa1109810 | Msa1423540 | 0.833732 | 4.502672e-56 | -8.615850e-47 |
| Msa1109810 | Msa1423820 | 0.809870 | 1.528168e-50 | -8.615850e-47 |
| Msa1109810 | Msa1428780 | 0.815348 | 9.680726e-52 | -8.615850e-47 |
| Msa1109810 | Msa1430130 | 0.816661 | 4.928608e-52 | -8.615850e-47 |
| Msa1109810 | Msa1433410 | 0.813436 | 2.562234e-51 | -8.615850e-47 |
| Msa1109810 | Msa1437730 | 0.831121 | 1.997744e-55 | -8.615850e-47 |
| Msa1109810 | Msa1438840 | 0.834595 | 2.737005e-56 | -8.615850e-47 |
| Msa1109810 | Msa1443620 | 0.809018 | 2.327617e-50 | -8.615850e-47 |
| Msa1109810 | Msa1444120 | 0.818195 | 2.224766e-52 | -8.615850e-47 |
| Msa1109810 | Msa1458090 | 0.800114 | 1.677855e-48 | -8.615850e-47 |
| Msa1109810 | Msa1460750 | 0.814581 | 1.432462e-51 | -8.615850e-47 |
| Msa0482940 | Msa1109810 | 0.821496 | 3.915766e-53 | -8.615850e-47 |
| Msa0484630 | Msa1109810 | 0.829815 | 4.166811e-55 | -8.615850e-47 |
| Msa0484640 | Msa1109810 | 0.817324 | 3.499190e-52 | -8.615850e-47 |
| Msa0500400 | Msa1109810 | 0.841132 | 5.719322e-58 | -8.615850e-47 |
| Msa0518170 | Msa1109810 | 0.854943 | 8.790100e-62 | -8.615850e-47 |
| Msa0519160 | Msa1109810 | 0.846620 | 1.937724e-59 | -8.615850e-47 |
| Msa0521010 | Msa1109810 | 0.804814 | 1.803372e-49 | -8.615850e-47 |
| Msa0528990 | Msa1109810 | 0.807556 | 4.770528e-50 | -8.615850e-47 |
| Msa0529000 | Msa1109810 | 0.846546 | 2.030048e-59 | -8.615850e-47 |
| Msa0534870 | Msa1109810 | 0.849728 | 2.683707e-60 | -8.615850e-47 |
| Msa0542530 | Msa1109810 | 0.822039 | 2.931908e-53 | -8.615850e-47 |
| Msa0542560 | Msa1109810 | 0.835150 | 1.983895e-56 | -8.615850e-47 |
| Msa0544160 | Msa1109810 | 0.807969 | 3.897626e-50 | -8.615850e-47 |
| Msa0545020 | Msa1109810 | 0.818328 | 2.076364e-52 | -8.615850e-47 |
| Msa0545050 | Msa1109810 | 0.859859 | 3.089256e-63 | -8.615850e-47 |
| Msa0549140 | Msa1109810 | 0.800746 | 1.247013e-48 | -8.615850e-47 |
| Msa0567370 | Msa1109810 | 0.804339 | 2.265464e-49 | -8.615850e-47 |
| Msa0574930 | Msa1109810 | 0.824333 | 8.542049e-54 | -8.615850e-47 |
| Msa0581400 | Msa1109810 | 0.811358 | 7.285520e-51 | -8.615850e-47 |
| Msa0584580 | Msa1109810 | 0.814777 | 1.296330e-51 | -8.615850e-47 |
| Msa0584600 | Msa1109810 | 0.818092 | 2.347980e-52 | -8.615850e-47 |
| Msa0600590 | Msa1109810 | 0.870101 | 1.882261e-66 | -8.615850e-47 |
| Msa0844610 | Msa1109810 | 0.825544 | 4.425145e-54 | -8.615850e-47 |
| Msa0853440 | Msa1109810 | 0.815748 | 7.887669e-52 | -8.615850e-47 |
| Msa0862620 | Msa1109810 | 0.812508 | 4.092750e-51 | -8.615850e-47 |
| Msa0863720 | Msa1109810 | 0.834740 | 2.516356e-56 | -8.615850e-47 |
| Msa0863990 | Msa1109810 | 0.847755 | 9.462728e-60 | -8.615850e-47 |
| Msa0871430 | Msa1109810 | 0.803919 | 2.769803e-49 | -8.615850e-47 |
| Msa0894710 | Msa1109810 | 0.812377 | 4.370540e-51 | -8.615850e-47 |
| Msa0921420 | Msa1109810 | 0.814938 | 1.193735e-51 | -8.615850e-47 |
| Msa0930740 | Msa1109810 | 0.804209 | 2.411243e-49 | -8.615850e-47 |
| Msa0945130 | Msa1109810 | 0.820071 | 8.324162e-53 | -8.615850e-47 |
| Msa0960390 | Msa1109810 | 0.823380 | 1.429130e-53 | -8.615850e-47 |
| Msa0968050 | Msa1109810 | 0.805302 | 1.425284e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109810 | MtrunA17_Chr7g0244371 | 93.130 | 131 | 9 | 0 | 6 | 136 | 82 | 212 | 3.77e-90 | 260 |
| Msa1109810 | MtrunA17_Chr7g0244341 | 85.484 | 124 | 18 | 0 | 12 | 135 | 90 | 213 | 9.37e-79 | 232 |
| Msa1109810 | MtrunA17_Chr7g0244361 | 81.679 | 131 | 24 | 0 | 6 | 136 | 113 | 243 | 1.82e-77 | 229 |
| Msa1109810 | MtrunA17_Chr7g0244321 | 82.171 | 129 | 23 | 0 | 6 | 134 | 84 | 212 | 7.82e-77 | 226 |
| Msa1109810 | MtrunA17_Chr7g0244331 | 79.389 | 131 | 27 | 0 | 4 | 134 | 82 | 212 | 1.07e-75 | 224 |
| Msa1109810 | MtrunA17_Chr7g0244111 | 80.992 | 121 | 23 | 0 | 11 | 131 | 1 | 121 | 3.88e-74 | 216 |
| Msa1109810 | MtrunA17_Chr4g0013291 | 65.079 | 126 | 44 | 0 | 6 | 131 | 72 | 197 | 6.25e-58 | 178 |
| Msa1109810 | MtrunA17_Chr1g0150081 | 58.772 | 114 | 43 | 2 | 12 | 125 | 75 | 184 | 4.66e-39 | 130 |
| Msa1109810 | MtrunA17_Chr1g0150091 | 43.382 | 136 | 54 | 5 | 6 | 125 | 2 | 130 | 3.27e-22 | 85.5 |
| Msa1109810 | MtrunA17_Chr1g0150101 | 54.430 | 79 | 32 | 2 | 47 | 125 | 4 | 78 | 2.33e-20 | 79.0 |
| Msa1109810 | MtrunA17_Chr2g0333101 | 30.833 | 120 | 77 | 4 | 15 | 132 | 90 | 205 | 9.49e-18 | 75.9 |
| Msa1109810 | MtrunA17_Chr5g0432221 | 37.037 | 108 | 63 | 3 | 20 | 124 | 105 | 210 | 1.15e-16 | 73.2 |
| Msa1109810 | MtrunA17_Chr4g0003271 | 27.119 | 118 | 82 | 4 | 15 | 131 | 79 | 193 | 6.14e-16 | 70.9 |
| Msa1109810 | MtrunA17_Chr2g0333111 | 28.571 | 119 | 79 | 4 | 15 | 131 | 91 | 205 | 1.39e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109810 | AT5G01750.2 | 62.903 | 124 | 46 | 0 | 6 | 129 | 88 | 211 | 7.54e-59 | 181 |
| Msa1109810 | AT3G11740.1 | 64.957 | 117 | 40 | 1 | 14 | 129 | 72 | 188 | 1.55e-53 | 167 |
| Msa1109810 | AT1G33840.1 | 55.645 | 124 | 55 | 0 | 6 | 129 | 88 | 211 | 6.54e-46 | 149 |
| Msa1109810 | AT2G14560.1 | 54.032 | 124 | 57 | 0 | 6 | 129 | 68 | 191 | 9.86e-46 | 147 |
| Msa1109810 | AT2G14560.3 | 54.032 | 124 | 57 | 0 | 6 | 129 | 128 | 251 | 1.17e-44 | 147 |
| Msa1109810 | AT5G01750.1 | 60.000 | 85 | 34 | 0 | 6 | 90 | 88 | 172 | 1.96e-35 | 120 |
| Msa1109810 | AT3G16900.1 | 42.400 | 125 | 60 | 3 | 6 | 129 | 67 | 180 | 1.76e-32 | 113 |
| Msa1109810 | AT2G14560.2 | 51.163 | 86 | 42 | 0 | 6 | 91 | 68 | 153 | 3.76e-30 | 107 |
| Msa1109810 | AT2G14560.4 | 51.163 | 86 | 42 | 0 | 6 | 91 | 128 | 213 | 4.25e-29 | 106 |
| Msa1109810 | AT1G33840.2 | 52.326 | 86 | 41 | 0 | 6 | 91 | 88 | 173 | 7.07e-28 | 101 |
| Msa1109810 | AT3G56180.2 | 34.328 | 134 | 79 | 3 | 4 | 134 | 77 | 204 | 2.22e-19 | 80.5 |
| Msa1109810 | AT3G56180.1 | 33.582 | 134 | 78 | 4 | 4 | 134 | 77 | 202 | 2.97e-17 | 74.7 |
| Msa1109810 | AT3G15810.1 | 29.060 | 117 | 79 | 2 | 15 | 131 | 92 | 204 | 2.01e-16 | 72.8 |
| Msa1109810 | AT2G30270.1 | 33.962 | 106 | 64 | 3 | 20 | 124 | 78 | 178 | 1.00e-15 | 70.1 |
| Msa1109810 | AT3G10986.1 | 32.283 | 127 | 77 | 3 | 13 | 134 | 73 | 195 | 2.32e-15 | 69.7 |
| Msa1109810 | AT1G80120.1 | 30.702 | 114 | 73 | 3 | 20 | 131 | 84 | 193 | 7.53e-14 | 65.9 |
Find 17 sgRNAs with CRISPR-Local
Find 23 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGTCTTAAATTGCATT+AGG | 0.261327 | 7_3:-54254882 | None:intergenic |
| TTTGGTCTTAAATTGCATTA+GGG | 0.330409 | 7_3:-54254881 | None:intergenic |
| AGCAAGAAACACATCTAATT+TGG | 0.342809 | 7_3:-54254899 | None:intergenic |
| GTGGCATTAATCGTGATTCT+TGG | 0.373611 | 7_3:+54255192 | Msa1109810:CDS |
| GATAAACTGTGACCATAAAA+TGG | 0.388429 | 7_3:-54255146 | None:intergenic |
| TATAAAAGCGTAATCAATGT+TGG | 0.462661 | 7_3:-54255169 | None:intergenic |
| ATAAAAGCGTAATCAATGTT+GGG | 0.479628 | 7_3:-54255168 | None:intergenic |
| ATCTAATAACATTGTTGCAC+AGG | 0.491705 | 7_3:+54255002 | Msa1109810:CDS |
| CGATCTTGCACTGTTTATGC+TGG | 0.521359 | 7_3:+54254976 | Msa1109810:CDS |
| ACTTTAAAGTCAGAGGCAGT+TGG | 0.523990 | 7_3:+54254947 | Msa1109810:CDS |
| ATTGACTATGCATGATCGGT+GGG | 0.561743 | 7_3:+54254798 | Msa1109810:CDS |
| GATCGGTGGGAAGCGTATAG+AGG | 0.562084 | 7_3:+54254811 | Msa1109810:CDS |
| AGGTCAAAGCACAAATGCTA+AGG | 0.563005 | 7_3:+54254831 | Msa1109810:CDS |
| GTTTGTGACTTTAAAGTCAG+AGG | 0.577508 | 7_3:+54254940 | Msa1109810:CDS |
| AGATATTGACTATGCATGAT+CGG | 0.578461 | 7_3:+54254794 | Msa1109810:CDS |
| TATTGACTATGCATGATCGG+TGG | 0.603063 | 7_3:+54254797 | Msa1109810:CDS |
| ATGCAAAGAATAGTAACTAG+AGG | 0.634925 | 7_3:+54255229 | Msa1109810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATCACAAATTAATTTTTG+TGG | + | chr7_3:54255058-54255077 | Msa1109810:intron | 15.0% |
| !!! | TTTGGTCTTAAATTGCATTA+GGG | - | chr7_3:54254884-54254903 | None:intergenic | 25.0% |
| !!! | ATTTGGTCTTAAATTGCATT+AGG | - | chr7_3:54254885-54254904 | None:intergenic | 25.0% |
| !! | AATTGGTAAAGACCATTTTA+TGG | + | chr7_3:54255134-54255153 | Msa1109810:CDS | 25.0% |
| !! | ATAAAAGCGTAATCAATGTT+GGG | - | chr7_3:54255171-54255190 | None:intergenic | 25.0% |
| !! | TATAAAAGCGTAATCAATGT+TGG | - | chr7_3:54255172-54255191 | None:intergenic | 25.0% |
| !! | ATTTTCAATTCGTGTGTAAT+AGG | + | chr7_3:54255286-54255305 | Msa1109810:three_prime_UTR | 25.0% |
| ! | AGATATTGACTATGCATGAT+CGG | + | chr7_3:54254794-54254813 | Msa1109810:CDS | 30.0% |
| AGCAAGAAACACATCTAATT+TGG | - | chr7_3:54254902-54254921 | None:intergenic | 30.0% | |
| ATCTAATAACATTGTTGCAC+AGG | + | chr7_3:54255002-54255021 | Msa1109810:CDS | 30.0% | |
| GATAAACTGTGACCATAAAA+TGG | - | chr7_3:54255149-54255168 | None:intergenic | 30.0% | |
| !! | CATTGATTACGCTTTTATAG+TGG | + | chr7_3:54255173-54255192 | Msa1109810:CDS | 30.0% |
| ATGCAAAGAATAGTAACTAG+AGG | + | chr7_3:54255229-54255248 | Msa1109810:CDS | 30.0% | |
| !! | GTTTGTGACTTTAAAGTCAG+AGG | + | chr7_3:54254940-54254959 | Msa1109810:CDS | 35.0% |
| !! | ACGGTTACGAGCATTTTAAT+TGG | + | chr7_3:54255117-54255136 | Msa1109810:CDS | 35.0% |
| ! | TATTGACTATGCATGATCGG+TGG | + | chr7_3:54254797-54254816 | Msa1109810:CDS | 40.0% |
| ATTGACTATGCATGATCGGT+GGG | + | chr7_3:54254798-54254817 | Msa1109810:CDS | 40.0% | |
| AGGTCAAAGCACAAATGCTA+AGG | + | chr7_3:54254831-54254850 | Msa1109810:CDS | 40.0% | |
| !! | ACTTTAAAGTCAGAGGCAGT+TGG | + | chr7_3:54254947-54254966 | Msa1109810:CDS | 40.0% |
| GTGGCATTAATCGTGATTCT+TGG | + | chr7_3:54255192-54255211 | Msa1109810:CDS | 40.0% | |
| CGATCTTGCACTGTTTATGC+TGG | + | chr7_3:54254976-54254995 | Msa1109810:CDS | 45.0% | |
| ! | GCAGATGCACAAAAAGCACA+CGG | + | chr7_3:54255098-54255117 | Msa1109810:intron | 45.0% |
| ! | GATCGGTGGGAAGCGTATAG+AGG | + | chr7_3:54254811-54254830 | Msa1109810:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 54254760 | 54255324 | 54254760 | ID=Msa1109810;Name=Msa1109810 |
| chr7_3 | mRNA | 54254760 | 54255324 | 54254760 | ID=Msa1109810-mRNA-1;Parent=Msa1109810;Name=Msa1109810-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|0.5|1|1|1|2|76|136 |
| chr7_3 | exon | 54254760 | 54255023 | 54254760 | ID=Msa1109810-mRNA-1:exon:11384;Parent=Msa1109810-mRNA-1 |
| chr7_3 | exon | 54255102 | 54255324 | 54255102 | ID=Msa1109810-mRNA-1:exon:11385;Parent=Msa1109810-mRNA-1 |
| chr7_3 | CDS | 54254760 | 54255023 | 54254760 | ID=Msa1109810-mRNA-1:cds;Parent=Msa1109810-mRNA-1 |
| chr7_3 | CDS | 54255102 | 54255248 | 54255102 | ID=Msa1109810-mRNA-1:cds;Parent=Msa1109810-mRNA-1 |
| chr7_3 | three_prime_UTR | 54255249 | 54255324 | 54255249 | ID=Msa1109810-mRNA-1:three_prime_utr;Parent=Msa1109810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
