Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442820 | sp|Q9SS87|SEOB_ARATH | 39.973 | 728 | 389 | 14 | 1 | 704 | 26 | 729 | 0.0 | 540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442820 | A0A072TU76 | 98.011 | 704 | 14 | 0 | 1 | 704 | 1 | 704 | 0.0 | 1444 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa1442820 | 0.805535 | 1.273629e-49 | -8.615850e-47 |
| Msa0003720 | Msa1442820 | 0.800600 | 1.335620e-48 | -8.615850e-47 |
| Msa0004640 | Msa1442820 | 0.803338 | 3.656194e-49 | -8.615850e-47 |
| Msa0014990 | Msa1442820 | 0.800605 | 1.332652e-48 | -8.615850e-47 |
| Msa0025330 | Msa1442820 | 0.805345 | 1.396395e-49 | -8.615850e-47 |
| Msa0032090 | Msa1442820 | 0.834680 | 2.605943e-56 | -8.615850e-47 |
| Msa0032430 | Msa1442820 | 0.835503 | 1.615966e-56 | -8.615850e-47 |
| Msa0032920 | Msa1442820 | -0.814636 | 1.392671e-51 | -8.615850e-47 |
| Msa0032960 | Msa1442820 | -0.808870 | 2.504025e-50 | -8.615850e-47 |
| Msa0034270 | Msa1442820 | 0.816419 | 5.585378e-52 | -8.615850e-47 |
| Msa0040690 | Msa1442820 | 0.812063 | 5.117501e-51 | -8.615850e-47 |
| Msa0072900 | Msa1442820 | 0.807642 | 4.575872e-50 | -8.615850e-47 |
| Msa0074240 | Msa1442820 | 0.806263 | 8.955452e-50 | -8.615850e-47 |
| Msa0079380 | Msa1442820 | 0.843517 | 1.334812e-58 | -8.615850e-47 |
| Msa0081520 | Msa1442820 | 0.822271 | 2.589441e-53 | -8.615850e-47 |
| Msa0089630 | Msa1442820 | 0.807047 | 6.116353e-50 | -8.615850e-47 |
| Msa0094120 | Msa1442820 | 0.814233 | 1.710236e-51 | -8.615850e-47 |
| Msa0094850 | Msa1442820 | 0.819748 | 9.868663e-53 | -8.615850e-47 |
| Msa1353060 | Msa1442820 | 0.829678 | 4.499804e-55 | -8.615850e-47 |
| Msa1358250 | Msa1442820 | 0.807474 | 4.966445e-50 | -8.615850e-47 |
| Msa1363330 | Msa1442820 | 0.801703 | 7.946854e-49 | -8.615850e-47 |
| Msa1366600 | Msa1442820 | 0.856011 | 4.292805e-62 | -8.615850e-47 |
| Msa1370010 | Msa1442820 | 0.803742 | 3.015250e-49 | -8.615850e-47 |
| Msa1374060 | Msa1442820 | 0.800873 | 1.174663e-48 | -8.615850e-47 |
| Msa1374120 | Msa1442820 | 0.852757 | 3.743310e-61 | -8.615850e-47 |
| Msa1382560 | Msa1442820 | 0.816855 | 4.458190e-52 | -8.615850e-47 |
| Msa1382620 | Msa1442820 | 0.831258 | 1.848198e-55 | -8.615850e-47 |
| Msa1386600 | Msa1442820 | 0.802585 | 5.230968e-49 | -8.615850e-47 |
| Msa1394290 | Msa1442820 | 0.815212 | 1.038097e-51 | -8.615850e-47 |
| Msa1423350 | Msa1442820 | 0.814235 | 1.708552e-51 | -8.615850e-47 |
| Msa1433810 | Msa1442820 | 0.826665 | 2.395234e-54 | -8.615850e-47 |
| Msa1435890 | Msa1442820 | 0.801956 | 7.048313e-49 | -8.615850e-47 |
| Msa1437940 | Msa1442820 | 0.808411 | 3.138977e-50 | -8.615850e-47 |
| Msa1442820 | Msa1445190 | 0.809066 | 2.273678e-50 | -8.615850e-47 |
| Msa1442820 | Msa1448690 | 0.813997 | 1.927467e-51 | -8.615850e-47 |
| Msa1442820 | Msa1457920 | 0.805714 | 1.167968e-49 | -8.615850e-47 |
| Msa1442820 | Msa1463670 | 0.803715 | 3.053312e-49 | -8.615850e-47 |
| Msa1442820 | Msa1464810 | 0.835549 | 1.573380e-56 | -8.615850e-47 |
| Msa0615440 | Msa1442820 | 0.828341 | 9.486200e-55 | -8.615850e-47 |
| Msa0623330 | Msa1442820 | 0.810332 | 1.214832e-50 | -8.615850e-47 |
| Msa0625720 | Msa1442820 | 0.814350 | 1.611199e-51 | -8.615850e-47 |
| Msa0626450 | Msa1442820 | 0.803221 | 3.866403e-49 | -8.615850e-47 |
| Msa0626490 | Msa1442820 | 0.804609 | 1.990130e-49 | -8.615850e-47 |
| Msa0639430 | Msa1442820 | 0.806245 | 9.035224e-50 | -8.615850e-47 |
| Msa0650020 | Msa1442820 | 0.811338 | 7.361221e-51 | -8.615850e-47 |
| Msa0663390 | Msa1442820 | 0.821197 | 4.588845e-53 | -8.615850e-47 |
| Msa0689260 | Msa1442820 | 0.805207 | 1.492248e-49 | -8.615850e-47 |
| Msa0691980 | Msa1442820 | 0.803384 | 3.576316e-49 | -8.615850e-47 |
| Msa0698490 | Msa1442820 | 0.827876 | 1.227954e-54 | -8.615850e-47 |
| Msa0698660 | Msa1442820 | 0.829693 | 4.461860e-55 | -8.615850e-47 |
| Msa0698770 | Msa1442820 | 0.801245 | 9.860732e-49 | -8.615850e-47 |
| Msa0703270 | Msa1442820 | 0.852344 | 4.910276e-61 | -8.615850e-47 |
| Msa0704600 | Msa1442820 | 0.803888 | 2.811964e-49 | -8.615850e-47 |
| Msa0708520 | Msa1442820 | 0.808947 | 2.411087e-50 | -8.615850e-47 |
| Msa0711780 | Msa1442820 | 0.818609 | 1.792868e-52 | -8.615850e-47 |
| Msa0744000 | Msa1442820 | 0.802121 | 6.518783e-49 | -8.615850e-47 |
| Msa0750880 | Msa1442820 | 0.829171 | 5.975039e-55 | -8.615850e-47 |
| Msa0770720 | Msa1442820 | 0.807320 | 5.353550e-50 | -8.615850e-47 |
| Msa0794670 | Msa1442820 | 0.824090 | 9.742579e-54 | -8.615850e-47 |
| Msa0796160 | Msa1442820 | 0.808135 | 3.593235e-50 | -8.615850e-47 |
| Msa0796530 | Msa1442820 | 0.802281 | 6.043592e-49 | -8.615850e-47 |
| Msa0823820 | Msa1442820 | 0.810195 | 1.300748e-50 | -8.615850e-47 |
| Msa0824660 | Msa1442820 | 0.806850 | 6.731852e-50 | -8.615850e-47 |
| Msa0828560 | Msa1442820 | 0.802465 | 5.539701e-49 | -8.615850e-47 |
| Msa0121090 | Msa1442820 | 0.801031 | 1.090721e-48 | -8.615850e-47 |
| Msa0146280 | Msa1442820 | 0.802473 | 5.518821e-49 | -8.615850e-47 |
| Msa0172070 | Msa1442820 | 0.834905 | 2.286802e-56 | -8.615850e-47 |
| Msa0173660 | Msa1442820 | 0.811836 | 5.737077e-51 | -8.615850e-47 |
| Msa0173890 | Msa1442820 | 0.808858 | 2.519472e-50 | -8.615850e-47 |
| Msa0186920 | Msa1442820 | 0.844571 | 6.960101e-59 | -8.615850e-47 |
| Msa0187930 | Msa1442820 | 0.812593 | 3.920729e-51 | -8.615850e-47 |
| Msa0190690 | Msa1442820 | 0.800478 | 1.414403e-48 | -8.615850e-47 |
| Msa0194540 | Msa1442820 | 0.816335 | 5.830569e-52 | -8.615850e-47 |
| Msa0225740 | Msa1442820 | 0.816477 | 5.419530e-52 | -8.615850e-47 |
| Msa0231650 | Msa1442820 | 0.803996 | 2.669427e-49 | -8.615850e-47 |
| Msa1252190 | Msa1442820 | 0.803878 | 2.824790e-49 | -8.615850e-47 |
| Msa1255040 | Msa1442820 | -0.814242 | 1.702475e-51 | -8.615850e-47 |
| Msa1257510 | Msa1442820 | 0.811510 | 6.752183e-51 | -8.615850e-47 |
| Msa1292830 | Msa1442820 | 0.824593 | 7.419848e-54 | -8.615850e-47 |
| Msa0366240 | Msa1442820 | 0.814721 | 1.333495e-51 | -8.615850e-47 |
| Msa0378720 | Msa1442820 | 0.811282 | 7.568461e-51 | -8.615850e-47 |
| Msa0385580 | Msa1442820 | 0.808131 | 3.599946e-50 | -8.615850e-47 |
| Msa0388770 | Msa1442820 | 0.815158 | 1.066646e-51 | -8.615850e-47 |
| Msa0402650 | Msa1442820 | 0.841601 | 4.304630e-58 | -8.615850e-47 |
| Msa0403970 | Msa1442820 | 0.800560 | 1.360875e-48 | -8.615850e-47 |
| Msa0410650 | Msa1442820 | 0.801235 | 9.909946e-49 | -8.615850e-47 |
| Msa0417880 | Msa1442820 | 0.818612 | 1.789922e-52 | -8.615850e-47 |
| Msa0479170 | Msa1442820 | 0.845081 | 5.073123e-59 | -8.615850e-47 |
| Msa0481530 | Msa1442820 | 0.815714 | 8.024710e-52 | -8.615850e-47 |
| Msa0979730 | Msa1442820 | 0.818434 | 1.964442e-52 | -8.615850e-47 |
| Msa1006840 | Msa1442820 | 0.831710 | 1.430280e-55 | -8.615850e-47 |
| Msa1007270 | Msa1442820 | 0.801229 | 9.937367e-49 | -8.615850e-47 |
| Msa1013400 | Msa1442820 | 0.859694 | 3.464732e-63 | -8.615850e-47 |
| Msa1020630 | Msa1442820 | 0.810437 | 1.153355e-50 | -8.615850e-47 |
| Msa1024740 | Msa1442820 | 0.801403 | 9.154959e-49 | -8.615850e-47 |
| Msa1031930 | Msa1442820 | 0.838920 | 2.158985e-57 | -8.615850e-47 |
| Msa1035960 | Msa1442820 | 0.801170 | 1.021471e-48 | -8.615850e-47 |
| Msa1041210 | Msa1442820 | 0.815305 | 9.894561e-52 | -8.615850e-47 |
| Msa1043690 | Msa1442820 | 0.809469 | 1.863416e-50 | -8.615850e-47 |
| Msa1048920 | Msa1442820 | 0.808642 | 2.801439e-50 | -8.615850e-47 |
| Msa1051880 | Msa1442820 | 0.835154 | 1.979614e-56 | -8.615850e-47 |
| Msa1065390 | Msa1442820 | 0.802421 | 5.655373e-49 | -8.615850e-47 |
| Msa1066490 | Msa1442820 | 0.813882 | 2.044253e-51 | -8.615850e-47 |
| Msa1081150 | Msa1442820 | 0.819352 | 1.214804e-52 | -8.615850e-47 |
| Msa1081980 | Msa1442820 | 0.801283 | 9.688936e-49 | -8.615850e-47 |
| Msa1093530 | Msa1442820 | 0.853210 | 2.777684e-61 | -8.615850e-47 |
| Msa1104140 | Msa1442820 | 0.809658 | 1.697201e-50 | -8.615850e-47 |
| Msa0244780 | Msa1442820 | 0.809095 | 2.240869e-50 | -8.615850e-47 |
| Msa0248970 | Msa1442820 | 0.817713 | 2.858492e-52 | -8.615850e-47 |
| Msa0261340 | Msa1442820 | 0.802186 | 6.322511e-49 | -8.615850e-47 |
| Msa0264590 | Msa1442820 | 0.807102 | 5.955392e-50 | -8.615850e-47 |
| Msa0266350 | Msa1442820 | 0.805429 | 1.340518e-49 | -8.615850e-47 |
| Msa0267920 | Msa1442820 | 0.801671 | 8.067811e-49 | -8.615850e-47 |
| Msa0268130 | Msa1442820 | 0.818525 | 1.872987e-52 | -8.615850e-47 |
| Msa0292400 | Msa1442820 | 0.807441 | 5.047408e-50 | -8.615850e-47 |
| Msa0298990 | Msa1442820 | 0.817332 | 3.483788e-52 | -8.615850e-47 |
| Msa0300180 | Msa1442820 | 0.807709 | 4.426792e-50 | -8.615850e-47 |
| Msa0300270 | Msa1442820 | 0.807022 | 6.190935e-50 | -8.615850e-47 |
| Msa0309770 | Msa1442820 | 0.822207 | 2.679937e-53 | -8.615850e-47 |
| Msa0337540 | Msa1442820 | 0.810160 | 1.323112e-50 | -8.615850e-47 |
| Msa0337700 | Msa1442820 | 0.803247 | 3.818372e-49 | -8.615850e-47 |
| Msa0339980 | Msa1442820 | 0.807183 | 5.724294e-50 | -8.615850e-47 |
| Msa0361080 | Msa1442820 | 0.801509 | 8.709292e-49 | -8.615850e-47 |
| Msa1113800 | Msa1442820 | 0.823361 | 1.444005e-53 | -8.615850e-47 |
| Msa1147900 | Msa1442820 | 0.807154 | 5.804722e-50 | -8.615850e-47 |
| Msa1152510 | Msa1442820 | 0.800967 | 1.124225e-48 | -8.615850e-47 |
| Msa1160500 | Msa1442820 | 0.818325 | 2.079291e-52 | -8.615850e-47 |
| Msa1165740 | Msa1442820 | 0.821718 | 3.477861e-53 | -8.615850e-47 |
| Msa1182860 | Msa1442820 | 0.809264 | 2.061665e-50 | -8.615850e-47 |
| Msa1201890 | Msa1442820 | 0.803321 | 3.685332e-49 | -8.615850e-47 |
| Msa1207270 | Msa1442820 | 0.801237 | 9.901110e-49 | -8.615850e-47 |
| Msa1207410 | Msa1442820 | 0.803874 | 2.830611e-49 | -8.615850e-47 |
| Msa1209460 | Msa1442820 | 0.829856 | 4.073258e-55 | -8.615850e-47 |
| Msa1218600 | Msa1442820 | 0.837022 | 6.640854e-57 | -8.615850e-47 |
| Msa0497490 | Msa1442820 | 0.801883 | 7.296988e-49 | -8.615850e-47 |
| Msa0498060 | Msa1442820 | 0.805338 | 1.400903e-49 | -8.615850e-47 |
| Msa0507680 | Msa1442820 | 0.810829 | 9.490256e-51 | -8.615850e-47 |
| Msa0513160 | Msa1442820 | 0.807070 | 6.048807e-50 | -8.615850e-47 |
| Msa0529890 | Msa1442820 | 0.812957 | 3.263865e-51 | -8.615850e-47 |
| Msa0532070 | Msa1442820 | 0.803179 | 3.943744e-49 | -8.615850e-47 |
| Msa0546680 | Msa1442820 | 0.812219 | 4.733958e-51 | -8.615850e-47 |
| Msa0557070 | Msa1442820 | 0.829359 | 5.380228e-55 | -8.615850e-47 |
| Msa0566310 | Msa1442820 | 0.809953 | 1.466706e-50 | -8.615850e-47 |
| Msa0569200 | Msa1442820 | 0.812840 | 3.462469e-51 | -8.615850e-47 |
| Msa0585560 | Msa1442820 | 0.821026 | 5.023676e-53 | -8.615850e-47 |
| Msa0863010 | Msa1442820 | 0.807479 | 4.954241e-50 | -8.615850e-47 |
| Msa0871270 | Msa1442820 | 0.815928 | 7.188618e-52 | -8.615850e-47 |
| Msa0902760 | Msa1442820 | 0.853879 | 1.784711e-61 | -8.615850e-47 |
| Msa0938220 | Msa1442820 | 0.812113 | 4.991055e-51 | -8.615850e-47 |
| Msa0968590 | Msa1442820 | 0.810818 | 9.538020e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442820 | MtrunA17_Chr8g0381301 | 98.011 | 704 | 14 | 0 | 1 | 704 | 1 | 704 | 0.0 | 1444 |
| Msa1442820 | MtrunA17_Chr3g0116601 | 52.991 | 702 | 316 | 8 | 7 | 704 | 15 | 706 | 0.0 | 745 |
| Msa1442820 | MtrunA17_Chr7g0226571 | 43.723 | 693 | 375 | 11 | 20 | 704 | 26 | 711 | 0.0 | 570 |
| Msa1442820 | MtrunA17_Chr1g0186841 | 32.521 | 698 | 402 | 20 | 17 | 703 | 23 | 662 | 1.33e-105 | 336 |
| Msa1442820 | MtrunA17_Chr1g0186851 | 31.746 | 693 | 413 | 23 | 17 | 703 | 22 | 660 | 2.59e-100 | 322 |
| Msa1442820 | MtrunA17_Chr1g0187041 | 30.914 | 689 | 419 | 21 | 22 | 704 | 26 | 663 | 6.49e-95 | 308 |
| Msa1442820 | MtrunA17_Chr1g0186861 | 30.836 | 694 | 420 | 23 | 17 | 703 | 22 | 662 | 2.38e-94 | 306 |
| Msa1442820 | MtrunA17_Chr1g0186911 | 32.348 | 609 | 357 | 20 | 101 | 703 | 1 | 560 | 3.76e-89 | 290 |
| Msa1442820 | MtrunA17_Chr1g0165791 | 29.014 | 710 | 416 | 24 | 20 | 703 | 30 | 677 | 8.24e-78 | 263 |
| Msa1442820 | MtrunA17_Chr1g0186991 | 25.301 | 664 | 369 | 25 | 88 | 704 | 84 | 667 | 2.37e-47 | 178 |
| Msa1442820 | MtrunA17_Chr1g0187001 | 27.202 | 647 | 372 | 24 | 87 | 704 | 60 | 636 | 8.49e-47 | 176 |
| Msa1442820 | MtrunA17_Chr1g0186981 | 25.645 | 620 | 396 | 19 | 101 | 704 | 93 | 663 | 2.50e-44 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442820 | AT3G01680.1 | 39.973 | 728 | 389 | 14 | 1 | 704 | 26 | 729 | 0.0 | 540 |
| Msa1442820 | AT3G01670.1 | 37.260 | 730 | 401 | 14 | 5 | 704 | 120 | 822 | 2.57e-156 | 473 |
| Msa1442820 | AT3G01670.2 | 37.260 | 730 | 401 | 14 | 5 | 704 | 144 | 846 | 6.71e-156 | 473 |
| Msa1442820 | AT1G67790.1 | 27.273 | 704 | 454 | 20 | 13 | 700 | 3 | 664 | 2.85e-74 | 253 |
Find 215 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCAATTGGGGTTGTTTC+TGG | 0.158557 | tig0030213:-40267 | Msa1442830:CDS |
| CAACAATAATTTGGTTCTTC+TGG | 0.161982 | tig0030213:+39435 | Msa1442820:CDS |
| GTTTCTGGTGCTGCTCTTAA+TGG | 0.209111 | tig0030213:-40252 | Msa1442830:CDS |
| AGCCAATGATGCCGAAAATA+TGG | 0.210391 | tig0030213:-37545 | None:intergenic |
| TCATTATTTCTAGCATTATT+TGG | 0.215889 | tig0030213:-39517 | None:intergenic |
| TGGTTCACAGCTTCGAATTT+AGG | 0.226976 | tig0030213:-37363 | None:intergenic |
| GTGGAAGCAGTCAACGTTTC+AGG | 0.227141 | tig0030213:-37468 | None:intergenic |
| CAGCCAACCTAGGGGAATTC+TGG | 0.232894 | tig0030213:+37244 | Msa1442820:CDS |
| TTATTCCTAGTGCTGTTTAT+TGG | 0.240892 | tig0030213:+37493 | Msa1442820:CDS |
| CTAAATCAAGTTGATGATTT+AGG | 0.243441 | tig0030213:+37339 | Msa1442820:CDS |
| CATTCCTTGTGATTCGTAAT+AGG | 0.264334 | tig0030213:+40476 | Msa1442820:three_prime_UTR |
| CTTATCCTTTCTCTAGCTTA+AGG | 0.273091 | tig0030213:+38698 | Msa1442820:CDS |
| TTCATCTGGTAAAGGTAAAA+AGG | 0.279247 | tig0030213:-40391 | Msa1442830:CDS |
| GATCACTAGTTCACCACAAC+TGG | 0.294890 | tig0030213:-36371 | None:intergenic |
| AAAGTCAATATGAACTTGTT+TGG | 0.301575 | tig0030213:+38437 | Msa1442820:CDS |
| TCGCCGACCCAACAATAATT+TGG | 0.306777 | tig0030213:+39426 | Msa1442820:CDS |
| TTTCACCTATTGCTCAGATT+TGG | 0.309135 | tig0030213:-40203 | Msa1442830:CDS |
| GCCATCTGTCGTCAACATTT+AGG | 0.310486 | tig0030213:+37776 | Msa1442820:CDS |
| TTGATCCATTACTCTTTGAT+TGG | 0.312322 | tig0030213:+38776 | Msa1442820:CDS |
| AACAATAATTTGGTTCTTCT+GGG | 0.327056 | tig0030213:+39436 | Msa1442820:CDS |
| GTGCTGTTTATTGGACGATT+AGG | 0.341924 | tig0030213:+37502 | Msa1442820:CDS |
| AGTTTATGACCCTTCACTTC+TGG | 0.343500 | tig0030213:+38543 | Msa1442820:CDS |
| GGTGCAAATGGGTGTCATTA+AGG | 0.345730 | tig0030213:+36716 | Msa1442820:CDS |
| CACCAACCGTCTTGCTAAAT+CGG | 0.347696 | tig0030213:+37287 | Msa1442820:CDS |
| CAACCTCTTGATCAGATATA+TGG | 0.348166 | tig0030213:-38363 | None:intergenic |
| TTCTGGAGCCGGCAAGTATC+AGG | 0.351408 | tig0030213:+38560 | Msa1442820:CDS |
| GATTTACAGAAGGCGTTGTT+TGG | 0.358146 | tig0030213:-40420 | Msa1442830:CDS |
| CAGTACACATGATGTGGATT+TGG | 0.360665 | tig0030213:+38665 | Msa1442820:CDS |
| GGTGCTGCTCTTAATGGAAT+TGG | 0.362930 | tig0030213:-40246 | Msa1442830:CDS |
| TTATCCTTTCTCTAGCTTAA+GGG | 0.366997 | tig0030213:+38699 | Msa1442820:CDS |
| TTTCTAACCTTGTTGAATCT+TGG | 0.368924 | tig0030213:-38417 | None:intergenic |
| AGTACACATGATGTGGATTT+GGG | 0.370269 | tig0030213:+38666 | Msa1442820:CDS |
| TAATTTGGTTCTTCTGGGTT+AGG | 0.371529 | tig0030213:+39441 | Msa1442820:CDS |
| GATCCGTTGCCATTGTTTGA+TGG | 0.373654 | tig0030213:+38101 | Msa1442820:CDS |
| TGTTTAATCAGTGGTTGAAA+TGG | 0.375434 | tig0030213:-40592 | Msa1442830:intron |
| TAATAGGATATCAATTCCTT+TGG | 0.375441 | tig0030213:+40492 | Msa1442820:three_prime_UTR |
| GCTTAAGGGAGGAAGCTCTT+TGG | 0.376320 | tig0030213:+38713 | Msa1442820:CDS |
| GGCAAGTATCAGGTACATTA+AGG | 0.376593 | tig0030213:+38570 | Msa1442820:CDS |
| TTGTTGAGACGTTTGCAATT+GGG | 0.377010 | tig0030213:-40278 | Msa1442830:CDS |
| TCTCATCCCTGACATCATTC+AGG | 0.378967 | tig0030213:+36592 | Msa1442820:CDS |
| TGTAACAGGTTAATACTTCC+AGG | 0.385524 | tig0030213:+39734 | Msa1442820:CDS |
| ACATCAACATGTTCTTCAAT+TGG | 0.386844 | tig0030213:-36521 | None:intergenic |
| GAATGTTATCAAGCTATTCA+TGG | 0.387548 | tig0030213:+37187 | Msa1442820:CDS |
| TCAGGTATAGAAGGTACATT+TGG | 0.388079 | tig0030213:+40555 | Msa1442820:three_prime_UTR |
| TTGATAGCAGTGATCTTGGT+TGG | 0.389293 | tig0030213:+39552 | Msa1442820:CDS |
| TTGGATTCCAATTGTGGAAA+AGG | 0.390783 | tig0030213:+38456 | Msa1442820:CDS |
| ATCTCACCAGGATAACATTA+AGG | 0.393914 | tig0030213:+38049 | Msa1442820:CDS |
| TGATAGCAGTGATCTTGGTT+GGG | 0.396003 | tig0030213:+39553 | Msa1442820:CDS |
| TTAATACTTCCAGGAGTTGA+TGG | 0.396920 | tig0030213:+39743 | Msa1442820:CDS |
| TTTGTTGAGACGTTTGCAAT+TGG | 0.400517 | tig0030213:-40279 | Msa1442830:CDS |
| AACAACCACATCATTGTAAC+AGG | 0.400553 | tig0030213:+39720 | Msa1442820:CDS |
| TCAACGTTTCAGGTGCTTCA+TGG | 0.401328 | tig0030213:-37458 | None:intergenic |
| GTCTAGCTTCTGAGTCAAAC+TGG | 0.402501 | tig0030213:-37723 | None:intergenic |
| ACAGGGAAAGCAGGTGCAAA+TGG | 0.405892 | tig0030213:+36704 | Msa1442820:intron |
| GAATTCCAAATCTGAGCAAT+AGG | 0.408372 | tig0030213:+40198 | Msa1442820:three_prime_UTR |
| CCTGGTGAGATGTCTCAAAA+AGG | 0.408664 | tig0030213:-38037 | None:intergenic |
| TTGTTTGGAGTAATTTCATC+TGG | 0.412151 | tig0030213:-40405 | Msa1442830:CDS |
| TGATCCATTACTCTTTGATT+GGG | 0.417724 | tig0030213:+38777 | Msa1442820:CDS |
| AACATGGGGACTTGCACTAT+TGG | 0.418376 | tig0030213:+38744 | Msa1442820:CDS |
| TTAATGTACCTGATACTTGC+CGG | 0.419081 | tig0030213:-38568 | None:intergenic |
| AAATGAATCTTCTAGAAAGA+TGG | 0.419369 | tig0030213:-40358 | Msa1442830:CDS |
| AGCTTTGATAGCAGTGATCT+TGG | 0.420787 | tig0030213:+39548 | Msa1442820:CDS |
| ACATCATGTGTACTGCATTC+AGG | 0.422398 | tig0030213:-38657 | None:intergenic |
| GGCAAATACATATGCTTGTA+TGG | 0.423354 | tig0030213:+39239 | Msa1442820:CDS |
| GGCATCATTGGCTTGGGTCA+AGG | 0.427388 | tig0030213:+37555 | Msa1442820:CDS |
| CAGAAGAACCAAATTATTGT+TGG | 0.427439 | tig0030213:-39434 | None:intergenic |
| CTTGTATGGAGGGGATGATA+TGG | 0.427516 | tig0030213:+39253 | Msa1442820:CDS |
| AAATTAAACAATAAAACAAA+AGG | 0.430329 | tig0030213:+40131 | Msa1442820:three_prime_UTR |
| TTAGAACCTTAATGTTATCC+TGG | 0.432692 | tig0030213:-38055 | None:intergenic |
| CTGCCTTCAGGTTAGCATTG+AGG | 0.432974 | tig0030213:+38297 | Msa1442820:intron |
| TCATTGAGGGGTAGATTTAG+TGG | 0.436309 | tig0030213:+40164 | Msa1442820:three_prime_UTR |
| CCAACATGGCCTTGAGAAGA+TGG | 0.452960 | tig0030213:-37383 | None:intergenic |
| TTCTATGCTAACCCTTTGCT+TGG | 0.456050 | tig0030213:-38129 | None:intergenic |
| ATGAAGCTTGATACTAAGCC+TGG | 0.457946 | tig0030213:-40303 | Msa1442830:CDS |
| GCCACAGCCATAGGAATACT+TGG | 0.462169 | tig0030213:+37165 | Msa1442820:CDS |
| TGGATTCCAATTGTGGAAAA+GGG | 0.462360 | tig0030213:+38457 | Msa1442820:CDS |
| GGAATTGTTCCATCAACTCC+TGG | 0.465713 | tig0030213:-39752 | None:intergenic |
| CAGCATTTGCAGCCAACCTA+GGG | 0.467499 | tig0030213:+37235 | Msa1442820:CDS |
| GCTTGTGGTGTTGGATCCAC+AGG | 0.469284 | tig0030213:+38621 | Msa1442820:CDS |
| ACACATACCTGAATGATGTC+AGG | 0.469745 | tig0030213:-36599 | None:intergenic |
| TCATGGTCAATGTACTGATC+AGG | 0.470291 | tig0030213:-37441 | None:intergenic |
| GGAGTAATTTCATCTGGTAA+AGG | 0.473380 | tig0030213:-40399 | Msa1442830:CDS |
| CACTGGAAATGATGTATGTA+GGG | 0.475708 | tig0030213:+39333 | Msa1442820:CDS |
| AGAAGAACCAAATTATTGTT+GGG | 0.477001 | tig0030213:-39433 | None:intergenic |
| AAGGGTGATGTGAATGATAA+AGG | 0.477561 | tig0030213:+39659 | Msa1442820:CDS |
| TAACATTCCAAGTATTCCTA+TGG | 0.480889 | tig0030213:-37172 | None:intergenic |
| GATCACTGCTATCAAAGCTT+AGG | 0.481506 | tig0030213:-39544 | None:intergenic |
| TGTTACAATGATGTGGTTGT+TGG | 0.481648 | tig0030213:-39718 | None:intergenic |
| TATAGAAGGTACATTTGGCT+TGG | 0.481909 | tig0030213:+40560 | Msa1442820:three_prime_UTR |
| TCAGCACATACAATCTTGTC+TGG | 0.484584 | tig0030213:-39773 | None:intergenic |
| CGATTTAGCAAGACGGTTGG+TGG | 0.490770 | tig0030213:-37286 | None:intergenic |
| GCCAATGATGCCGAAAATAT+GGG | 0.491206 | tig0030213:-37544 | None:intergenic |
| CCACTGGAAATGATGTATGT+AGG | 0.492407 | tig0030213:+39332 | Msa1442820:CDS |
| TGACCCTTCACTTCTGGAGC+CGG | 0.494397 | tig0030213:+38549 | Msa1442820:CDS |
| GCATCATTGGCTTGGGTCAA+GGG | 0.496479 | tig0030213:+37556 | Msa1442820:CDS |
| GCAGCATTTGCAGCCAACCT+AGG | 0.498859 | tig0030213:+37234 | Msa1442820:CDS |
| ACTTGTTTGGATTCCAATTG+TGG | 0.500335 | tig0030213:+38450 | Msa1442820:CDS |
| ACCTAAATGTTGACGACAGA+TGG | 0.501887 | tig0030213:-37777 | None:intergenic |
| CACAAGTGCTGCAAAATCAA+TGG | 0.502401 | tig0030213:+39292 | Msa1442820:CDS |
| CTCTTTGGAAAGATGAAACA+TGG | 0.504100 | tig0030213:+38728 | Msa1442820:CDS |
| TGTTGAGACGTTTGCAATTG+GGG | 0.507433 | tig0030213:-40277 | Msa1442830:CDS |
| TGTATGTAATCATCCATTGC+AGG | 0.507632 | tig0030213:-39689 | None:intergenic |
| TGATGGTTCTACCAAGCAAA+GGG | 0.508257 | tig0030213:+38118 | Msa1442820:CDS |
| GGGATGATATGGAATGGATC+AGG | 0.513866 | tig0030213:+39264 | Msa1442820:CDS |
| AAAGCCTATGCTTGTGGTGT+TGG | 0.519130 | tig0030213:+38612 | Msa1442820:CDS |
| AATGTTATCAAGCTATTCAT+GGG | 0.520097 | tig0030213:+37188 | Msa1442820:CDS |
| ATCTTCTAGAAAGATGGATT+CGG | 0.522036 | tig0030213:-40352 | Msa1442830:CDS |
| AAAAGCTTTGATTCGCTGCA+AGG | 0.522723 | tig0030213:+38076 | Msa1442820:CDS |
| CAGAAGCTAGACAGCATGAA+TGG | 0.523616 | tig0030213:+37734 | Msa1442820:CDS |
| CTAACCCAATCAAAGAGTAA+TGG | 0.523816 | tig0030213:-38781 | None:intergenic |
| GATATCTTGCAAGTGTATGA+TGG | 0.525160 | tig0030213:+37125 | Msa1442820:intron |
| CTTGCAAGTGTATGATGGGT+GGG | 0.527555 | tig0030213:+37130 | Msa1442820:CDS |
| CTATTACGAATCACAAGGAA+TGG | 0.531966 | tig0030213:-40475 | Msa1442830:CDS |
| TATTTAGGGGTTAAGAAAGG+TGG | 0.534020 | tig0030213:-39864 | None:intergenic |
| AGGGGTAGATTTAGTGGCTG+AGG | 0.534389 | tig0030213:+40170 | Msa1442820:three_prime_UTR |
| CAGGGAAAGCAGGTGCAAAT+GGG | 0.534533 | tig0030213:+36705 | Msa1442820:intron |
| AGGGTGCAAAATGTCATTGA+GGG | 0.536281 | tig0030213:+40151 | Msa1442820:three_prime_UTR |
| TGTGGCGCATAGCTCTAGAT+TGG | 0.538177 | tig0030213:-36442 | None:intergenic |
| TCCACTCATCCAACTCATCA+AGG | 0.539782 | tig0030213:-39637 | None:intergenic |
| GATGCTCATGCCACAGCCAT+AGG | 0.540232 | tig0030213:+37156 | Msa1442820:CDS |
| GGTGTTGGATCCACAGGGGA+AGG | 0.541944 | tig0030213:+38627 | Msa1442820:CDS |
| CAACACAAAGCCTATGCTTG+TGG | 0.543460 | tig0030213:+38606 | Msa1442820:CDS |
| TTCTTCAATTGGAGCATGAG+TGG | 0.548840 | tig0030213:-36510 | None:intergenic |
| GTCAAATAAGTCAGACTCGT+TGG | 0.549098 | tig0030213:-36745 | None:intergenic |
| TTCACAAGAAGCCTCATTGA+AGG | 0.549868 | tig0030213:-40451 | Msa1442830:CDS |
| AAGCCAGAATTCCCCTAGGT+TGG | 0.550403 | tig0030213:-37247 | None:intergenic |
| AATTAAACAATAAAACAAAA+GGG | 0.550866 | tig0030213:+40132 | Msa1442820:three_prime_UTR |
| TCCTCCCTTAAGCTAGAGAA+AGG | 0.552077 | tig0030213:-38703 | None:intergenic |
| CCATCTTCTCAAGGCCATGT+TGG | 0.553276 | tig0030213:+37383 | Msa1442820:CDS |
| AAGGGTGCAAAATGTCATTG+AGG | 0.553529 | tig0030213:+40150 | Msa1442820:three_prime_UTR |
| CCACCATATATCTGATCAAG+AGG | 0.555144 | tig0030213:+38360 | Msa1442820:CDS |
| AGGTTAGCATTGAGGTGTTG+AGG | 0.556064 | tig0030213:+38305 | Msa1442820:intron |
| AATACATATGCTTGTATGGA+GGG | 0.557127 | tig0030213:+39243 | Msa1442820:CDS |
| TGCTGAGTGTGGCCAGCCAA+TGG | 0.557768 | tig0030213:+39790 | Msa1442820:CDS |
| TCCAAGTATTCCTATGGCTG+TGG | 0.558646 | tig0030213:-37166 | None:intergenic |
| TGATGAGTTGGATGAGTGGA+AGG | 0.558717 | tig0030213:+39640 | Msa1442820:CDS |
| ATGGAGGGGATGATATGGAA+TGG | 0.560454 | tig0030213:+39258 | Msa1442820:CDS |
| GCAAACGTCTCAACAAATCC+AGG | 0.561055 | tig0030213:+40285 | Msa1442820:three_prime_UTR |
| GAACCAAATTATTGTTGGGT+CGG | 0.565403 | tig0030213:-39429 | None:intergenic |
| TTTAAAGTGCCTTGATGAGT+TGG | 0.567126 | tig0030213:+39628 | Msa1442820:CDS |
| GATATCAATTCCTTTGGCGA+AGG | 0.568099 | tig0030213:+40498 | Msa1442820:three_prime_UTR |
| TCATTGTTTCAGGTAACGGC+AGG | 0.571139 | tig0030213:+39218 | Msa1442820:intron |
| CCTACATACATCATTTCCAG+TGG | 0.574920 | tig0030213:-39332 | None:intergenic |
| GACTGCAATCAATGATGCCA+TGG | 0.581079 | tig0030213:+38515 | Msa1442820:CDS |
| GATGTGGATTTGGGGAAGCA+TGG | 0.581300 | tig0030213:+38675 | Msa1442820:CDS |
| GGATCCAACACCACAAGCAT+AGG | 0.581914 | tig0030213:-38616 | None:intergenic |
| TTGCAAGTGTATGATGGGTG+GGG | 0.583049 | tig0030213:+37131 | Msa1442820:CDS |
| TTGGACGATTAGGAGTATTG+TGG | 0.585521 | tig0030213:+37512 | Msa1442820:CDS |
| AGCTGTGAACCATCTTCTCA+AGG | 0.587074 | tig0030213:+37374 | Msa1442820:CDS |
| GCAATGGATGATTACATACA+AGG | 0.587303 | tig0030213:+39692 | Msa1442820:CDS |
| TTGATGGTTCTACCAAGCAA+AGG | 0.587353 | tig0030213:+38117 | Msa1442820:CDS |
| CTTGCCGGCTCCAGAAGTGA+AGG | 0.593649 | tig0030213:-38553 | None:intergenic |
| TCTTGCAAGTGTATGATGGG+TGG | 0.595387 | tig0030213:+37129 | Msa1442820:CDS |
| AAAGAAGATTCCTTCGCCAA+AGG | 0.596578 | tig0030213:-40508 | Msa1442830:CDS |
| TGCAAGTGTATGATGGGTGG+GGG | 0.599102 | tig0030213:+37132 | Msa1442820:CDS |
| AAGCTATTCATGGGATGCCA+AGG | 0.599229 | tig0030213:+37197 | Msa1442820:CDS |
| AACCGATTTAGCAAGACGGT+TGG | 0.600581 | tig0030213:-37289 | None:intergenic |
| CACATACCTGAATGATGTCA+GGG | 0.601333 | tig0030213:-36598 | None:intergenic |
| GGGTTAGGCTTGAAAGCATG+TGG | 0.601692 | tig0030213:+39456 | Msa1442820:CDS |
| TCCTTTCTCTAGCTTAAGGG+AGG | 0.602422 | tig0030213:+38702 | Msa1442820:CDS |
| CTTGATCAGATATATGGTGG+AGG | 0.605091 | tig0030213:-38357 | None:intergenic |
| TGCTAATGCTATCACCACCT+TGG | 0.608163 | tig0030213:-37214 | None:intergenic |
| GACATCAACAACAGAGACAT+GGG | 0.608488 | tig0030213:+37694 | Msa1442820:CDS |
| AATTAACAAAATTTCATGCG+AGG | 0.609758 | tig0030213:+36791 | Msa1442820:CDS |
| CCTCTTGATCAGATATATGG+TGG | 0.610021 | tig0030213:-38360 | None:intergenic |
| GCCTTGATGAGTTGGATGAG+TGG | 0.611429 | tig0030213:+39636 | Msa1442820:CDS |
| ATACATATGCTTGTATGGAG+GGG | 0.612025 | tig0030213:+39244 | Msa1442820:CDS |
| AACAGCACTAGGAATAAGAG+TGG | 0.612767 | tig0030213:-37487 | None:intergenic |
| ATCGTCCAATAAACAGCACT+AGG | 0.613869 | tig0030213:-37498 | None:intergenic |
| TGACATCAACAACAGAGACA+TGG | 0.615029 | tig0030213:+37693 | Msa1442820:CDS |
| GCTCTAGATTGGTTCTTCCG+TGG | 0.618668 | tig0030213:-36431 | None:intergenic |
| ATATCTTGCAAGTGTATGAT+GGG | 0.620245 | tig0030213:+37126 | Msa1442820:CDS |
| AGCCTCATTGAAGGTCATAG+AGG | 0.621483 | tig0030213:-40442 | Msa1442830:CDS |
| TCTTTGGAAAGATGAAACAT+GGG | 0.627324 | tig0030213:+38729 | Msa1442820:CDS |
| AAGAACTCTACAAATTCCAC+TGG | 0.628463 | tig0030213:+39316 | Msa1442820:CDS |
| AGGCACAGTAAGAATGACAC+AGG | 0.628719 | tig0030213:+39589 | Msa1442820:CDS |
| CAGGGATGAGAGAAGCTGCA+TGG | 0.630283 | tig0030213:-36580 | None:intergenic |
| GAACCATCAAACAATGGCAA+CGG | 0.633219 | tig0030213:-38104 | None:intergenic |
| TCAGGTACATTAAGGAGGTG+TGG | 0.633877 | tig0030213:+38578 | Msa1442820:CDS |
| GGTCATAGAGGATTTACAGA+AGG | 0.636264 | tig0030213:-40430 | Msa1442830:CDS |
| ATCACTAGTTCACCACAACT+GGG | 0.637746 | tig0030213:-36370 | None:intergenic |
| CTACAAGCCAGAATTCCCCT+AGG | 0.640741 | tig0030213:-37251 | None:intergenic |
| ATTAACCTGTTACAATGATG+TGG | 0.642311 | tig0030213:-39725 | None:intergenic |
| CATCTGATGCCGAAAACATG+TGG | 0.643576 | tig0030213:-36460 | None:intergenic |
| GGTTGGGCTATAATAAGTCA+AGG | 0.646453 | tig0030213:+39569 | Msa1442820:CDS |
| TGAATGCAGTACACATGATG+TGG | 0.648791 | tig0030213:+38659 | Msa1442820:CDS |
| TAGTCGAATTAACCCAGTTG+TGG | 0.650293 | tig0030213:+36358 | Msa1442820:five_prime_UTR |
| AGGTTCACAACCTTCCCCTG+TGG | 0.653743 | tig0030213:-38637 | None:intergenic |
| CAATTGGAGCATGAGTGGCG+CGG | 0.654595 | tig0030213:-36505 | None:intergenic |
| GTAAGAATGACACAGGGCAA+AGG | 0.655395 | tig0030213:+39596 | Msa1442820:CDS |
| CTTGTGGTGTTGGATCCACA+GGG | 0.655675 | tig0030213:+38622 | Msa1442820:CDS |
| ATTACAACAAAGCAAAACAG+TGG | 0.655934 | tig0030213:+39487 | Msa1442820:CDS |
| TTGCCGGCTCCAGAAGTGAA+GGG | 0.656832 | tig0030213:-38552 | None:intergenic |
| AAATACATATGCTTGTATGG+AGG | 0.657822 | tig0030213:+39242 | Msa1442820:CDS |
| CTATTCATGGGATGCCAAGG+TGG | 0.659627 | tig0030213:+37200 | Msa1442820:CDS |
| TCTTGAACAACATTAAGTAG+AGG | 0.666397 | tig0030213:-36548 | None:intergenic |
| ATCCTCTATGACCTTCAATG+AGG | 0.666837 | tig0030213:+40440 | Msa1442820:three_prime_UTR |
| TATGTAGGGAAAAGCAACCC+AGG | 0.668054 | tig0030213:+39347 | Msa1442820:CDS |
| AAGTATCAGGTACATTAAGG+AGG | 0.672143 | tig0030213:+38573 | Msa1442820:CDS |
| GCAATCAGTAACATCCAACA+TGG | 0.677386 | tig0030213:-37397 | None:intergenic |
| TTGGTAGAACCATCAAACAA+TGG | 0.687980 | tig0030213:-38110 | None:intergenic |
| GCAATAGGTGAAAGAATGTG+AGG | 0.689368 | tig0030213:+40213 | Msa1442820:three_prime_UTR |
| CTTTGGAAAGATGAAACATG+GGG | 0.692368 | tig0030213:+38730 | Msa1442820:CDS |
| GGGTCATAAACTGAGTACCA+TGG | 0.693180 | tig0030213:-38532 | None:intergenic |
| ATATCCTATTACGAATCACA+AGG | 0.694025 | tig0030213:-40480 | Msa1442830:CDS |
| GGGTGCAAAATGTCATTGAG+GGG | 0.694593 | tig0030213:+40152 | Msa1442820:three_prime_UTR |
| ATGCAACCGATTTAGCAAGA+CGG | 0.703963 | tig0030213:-37293 | None:intergenic |
| TTGTGGAAAAGGGAGCCTTG+TGG | 0.709783 | tig0030213:+38467 | Msa1442820:CDS |
| AAGATTGTATGTGCTGAGTG+TGG | 0.709803 | tig0030213:+39779 | Msa1442820:CDS |
| AATCGCGCCAAGATTCAACA+AGG | 0.710479 | tig0030213:+38410 | Msa1442820:CDS |
| AGCATTTGCAGCCAACCTAG+GGG | 0.713294 | tig0030213:+37236 | Msa1442820:CDS |
| GATGAGTTGGATGAGTGGAA+GGG | 0.734062 | tig0030213:+39641 | Msa1442820:CDS |
| GGCACAGTAAGAATGACACA+GGG | 0.746683 | tig0030213:+39590 | Msa1442820:CDS |
| GTACACATGATGTGGATTTG+GGG | 0.748134 | tig0030213:+38667 | Msa1442820:CDS |
| TTGTGGTGTTGGATCCACAG+GGG | 0.840678 | tig0030213:+38623 | Msa1442820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTGATCAAATAATAA+TGG | - | tig0030213:36401-36420 | None:intergenic | 10.0% |
| !! | ATTATTATTTGATCAAAAAA+TGG | + | tig0030213:36400-36419 | Msa1442820:exon | 10.0% |
| !! | TTAATTTACAAATGTAAAAA+CGG | - | tig0030213:40113-40132 | None:intergenic | 10.0% |
| !! | AAATTAAACAATAAAACAAA+AGG | + | tig0030213:40131-40150 | Msa1442820:three_prime_UTR | 10.0% |
| !! | AATTAAACAATAAAACAAAA+GGG | + | tig0030213:40132-40151 | Msa1442820:three_prime_UTR | 10.0% |
| !! | TAATAAGATCAAAAGTTAAA+TGG | - | tig0030213:38973-38992 | None:intergenic | 15.0% |
| !!! | TAGTATAATAATTGTTCTTT+TGG | + | tig0030213:38991-39010 | Msa1442820:intron | 15.0% |
| !!! | AGTATAATAATTGTTCTTTT+GGG | + | tig0030213:38992-39011 | Msa1442820:intron | 15.0% |
| !! | ATATTTATTTGTTTAATCAG+TGG | - | tig0030213:40604-40623 | Msa1442830:intron | 15.0% |
| !! | CTGATTAAACAAATAAATAT+TGG | + | tig0030213:40604-40623 | Msa1442820:intron | 15.0% |
| !! | ATTTGATCAAAAAATGGAAA+TGG | + | tig0030213:36406-36425 | Msa1442820:exon | 20.0% |
| !!! | TTGTTTTGAAATTTTACACA+GGG | + | tig0030213:36687-36706 | Msa1442820:intron | 20.0% |
| !!! | ATCTAGTTCTAGAAAATATT+CGG | - | tig0030213:37061-37080 | None:intergenic | 20.0% |
| !!! | AACATTAAGATATTTGTTGT+TGG | - | tig0030213:37620-37639 | None:intergenic | 20.0% |
| !! | ATATAGAGAATGAAAAACAT+AGG | - | tig0030213:38808-38827 | None:intergenic | 20.0% |
| !! | TTATAACAGACTTTATGAAT+CGG | - | tig0030213:39097-39116 | None:intergenic | 20.0% |
| !! | GAATAATAAGATCAAAAGAA+CGG | - | tig0030213:39200-39219 | None:intergenic | 20.0% |
| !! | ATCTTATTATTCATTGTTTC+AGG | + | tig0030213:39208-39227 | Msa1442820:intron | 20.0% |
| !!! | TCATTATTTCTAGCATTATT+TGG | - | tig0030213:39520-39539 | None:intergenic | 20.0% |
| !!! | TTTGCTGATATTTTATTTAG+GGG | - | tig0030213:39880-39899 | None:intergenic | 20.0% |
| !!! | GTTTGCTGATATTTTATTTA+GGG | - | tig0030213:39881-39900 | None:intergenic | 20.0% |
| !!! | TGTTTGCTGATATTTTATTT+AGG | - | tig0030213:39882-39901 | None:intergenic | 20.0% |
| !!! | TTTTGTTTCATTTTGATTTC+AGG | + | tig0030213:40537-40556 | Msa1442820:three_prime_UTR | 20.0% |
| !!! | TTTTGGTTTAATTTATGCTT+CGG | + | tig0030213:40777-40796 | Msa1442820:intron | 20.0% |
| !! | AATAAAAACAACATTAGACT+GGG | + | tig0030213:41117-41136 | Msa1442820:intron | 20.0% |
| ! | GTTAATTAACTATGTGTTTG+TGG | + | tig0030213:36664-36683 | Msa1442820:intron | 25.0% |
| !!! | GTTGTTTTGAAATTTTACAC+AGG | + | tig0030213:36686-36705 | Msa1442820:intron | 25.0% |
| ! | AATTAACAAAATTTCATGCG+AGG | + | tig0030213:36791-36810 | Msa1442820:CDS | 25.0% |
| ! | CAATATTGTCACTCATATTT+GGG | - | tig0030213:36999-37018 | None:intergenic | 25.0% |
| ! | TCAATATTGTCACTCATATT+TGG | - | tig0030213:37000-37019 | None:intergenic | 25.0% |
| ! | AATGTTATCAAGCTATTCAT+GGG | + | tig0030213:37188-37207 | Msa1442820:CDS | 25.0% |
| !!! | CTAAATCAAGTTGATGATTT+AGG | + | tig0030213:37339-37358 | Msa1442820:CDS | 25.0% |
| ! | CTTTGATTGCTAAAATATAG+CGG | + | tig0030213:37808-37827 | Msa1442820:intron | 25.0% |
| !! | AAAGTCAATATGAACTTGTT+TGG | + | tig0030213:38437-38456 | Msa1442820:CDS | 25.0% |
| ! | ATTTAAACATGTAATTCCCA+TGG | - | tig0030213:39027-39046 | None:intergenic | 25.0% |
| ! | TCTGTTATAAACAATCTTCT+TGG | + | tig0030213:39107-39126 | Msa1442820:intron | 25.0% |
| !! | TTATTCATTGTTTCAGGTAA+CGG | + | tig0030213:39214-39233 | Msa1442820:intron | 25.0% |
| ! | AGAAGAACCAAATTATTGTT+GGG | - | tig0030213:39436-39455 | None:intergenic | 25.0% |
| !!! | AACAATAATTTGGTTCTTCT+GGG | + | tig0030213:39436-39455 | Msa1442820:CDS | 25.0% |
| !!! | TGTTTTGCTTTGTTGTAATT+TGG | - | tig0030213:39486-39505 | None:intergenic | 25.0% |
| !!! | TTTTATTTAGGGGTTAAGAA+AGG | - | tig0030213:39870-39889 | None:intergenic | 25.0% |
| !! | AAATGAATCTTCTAGAAAGA+TGG | - | tig0030213:40361-40380 | Msa1442830:CDS | 25.0% |
| ! | TAATAGGATATCAATTCCTT+TGG | + | tig0030213:40492-40511 | Msa1442820:three_prime_UTR | 25.0% |
| !!! | ATTTTGATTTCAGGTATAGA+AGG | + | tig0030213:40546-40565 | Msa1442820:three_prime_UTR | 25.0% |
| ! | CAAAAACTAATTCAAAGTAG+AGG | + | tig0030213:40668-40687 | Msa1442820:intron | 25.0% |
| !! | TTTGGTTTAATTTATGCTTC+GGG | + | tig0030213:40778-40797 | Msa1442820:intron | 25.0% |
| !!! | TAATAATCATCGCTTTTGAT+AGG | - | tig0030213:41056-41075 | Msa1442830:intron | 25.0% |
| ! | GAATAAAAACAACATTAGAC+TGG | + | tig0030213:41116-41135 | Msa1442820:intron | 25.0% |
| AAAAAATGGAAATGGTACCA+CGG | + | tig0030213:36414-36433 | Msa1442820:exon | 30.0% | |
| ACATCAACATGTTCTTCAAT+TGG | - | tig0030213:36524-36543 | None:intergenic | 30.0% | |
| TCTTGAACAACATTAAGTAG+AGG | - | tig0030213:36551-36570 | None:intergenic | 30.0% | |
| ! | CGTAGTATCATTATGCTTTT+TGG | + | tig0030213:36639-36658 | Msa1442820:intron | 30.0% |
| TAAATATGCATGCTAATGCA+TGG | - | tig0030213:36831-36850 | None:intergenic | 30.0% | |
| GAGCTTGTAGAAACAATTTA+CGG | - | tig0030213:36975-36994 | None:intergenic | 30.0% | |
| TGTTACAAAAAATGCATTGC+CGG | + | tig0030213:37026-37045 | Msa1442820:intron | 30.0% | |
| !!! | AAATATTCGGTTTTTAGTGC+CGG | - | tig0030213:37048-37067 | None:intergenic | 30.0% |
| ATATCTTGCAAGTGTATGAT+GGG | + | tig0030213:37126-37145 | Msa1442820:CDS | 30.0% | |
| TAACATTCCAAGTATTCCTA+TGG | - | tig0030213:37175-37194 | None:intergenic | 30.0% | |
| GAATGTTATCAAGCTATTCA+TGG | + | tig0030213:37187-37206 | Msa1442820:CDS | 30.0% | |
| !! | TTATTCCTAGTGCTGTTTAT+TGG | + | tig0030213:37493-37512 | Msa1442820:CDS | 30.0% |
| CGTCAACATTTAGGTAATTA+AGG | + | tig0030213:37785-37804 | Msa1442820:intron | 30.0% | |
| ! | TCCAGTAACTAAATTGACTT+AGG | - | tig0030213:37865-37884 | None:intergenic | 30.0% |
| ! | ACACTGTATGGTTTTTCTTT+AGG | + | tig0030213:37929-37948 | Msa1442820:intron | 30.0% |
| TTAGAACCTTAATGTTATCC+TGG | - | tig0030213:38058-38077 | None:intergenic | 30.0% | |
| !! | ATAATCATTTTTCTGCCTTC+AGG | + | tig0030213:38285-38304 | Msa1442820:intron | 30.0% |
| TTTCTAACCTTGTTGAATCT+TGG | - | tig0030213:38420-38439 | None:intergenic | 30.0% | |
| !!! | CTCAAACTTCTGTTTTGTTT+CGG | - | tig0030213:38494-38513 | None:intergenic | 30.0% |
| ! | TTATCCTTTCTCTAGCTTAA+GGG | + | tig0030213:38699-38718 | Msa1442820:CDS | 30.0% |
| ! | TCTTTGGAAAGATGAAACAT+GGG | + | tig0030213:38729-38748 | Msa1442820:CDS | 30.0% |
| TTGATCCATTACTCTTTGAT+TGG | + | tig0030213:38776-38795 | Msa1442820:CDS | 30.0% | |
| TGATCCATTACTCTTTGATT+GGG | + | tig0030213:38777-38796 | Msa1442820:CDS | 30.0% | |
| GCATAACCAAACTAATAAAG+TGG | + | tig0030213:38843-38862 | Msa1442820:intron | 30.0% | |
| ! | AGTTAGCCACTTTATTAGTT+TGG | - | tig0030213:38852-38871 | None:intergenic | 30.0% |
| !!! | AGTTGCTAATTTTGATTGTC+CGG | - | tig0030213:39146-39165 | None:intergenic | 30.0% |
| AAATACATATGCTTGTATGG+AGG | + | tig0030213:39242-39261 | Msa1442820:CDS | 30.0% | |
| AATACATATGCTTGTATGGA+GGG | + | tig0030213:39243-39262 | Msa1442820:CDS | 30.0% | |
| !!! | TTCTTTTAACTTTCTGTCCT+GGG | - | tig0030213:39367-39386 | None:intergenic | 30.0% |
| !!! | ATTCTTTTAACTTTCTGTCC+TGG | - | tig0030213:39368-39387 | None:intergenic | 30.0% |
| CAGAAGAACCAAATTATTGT+TGG | - | tig0030213:39437-39456 | None:intergenic | 30.0% | |
| !! | CAACAATAATTTGGTTCTTC+TGG | + | tig0030213:39435-39454 | Msa1442820:CDS | 30.0% |
| ATTACAACAAAGCAAAACAG+TGG | + | tig0030213:39487-39506 | Msa1442820:CDS | 30.0% | |
| ATTAACCTGTTACAATGATG+TGG | - | tig0030213:39728-39747 | None:intergenic | 30.0% | |
| ! | TACATGTAGAACTTTTCCAT+TGG | - | tig0030213:39809-39828 | None:intergenic | 30.0% |
| ! | ATCTTCTAGAAAGATGGATT+CGG | - | tig0030213:40355-40374 | Msa1442830:CDS | 30.0% |
| TTCATCTGGTAAAGGTAAAA+AGG | - | tig0030213:40394-40413 | Msa1442830:CDS | 30.0% | |
| ! | TTGTTTGGAGTAATTTCATC+TGG | - | tig0030213:40408-40427 | Msa1442830:CDS | 30.0% |
| ATATCCTATTACGAATCACA+AGG | - | tig0030213:40483-40502 | Msa1442830:CDS | 30.0% | |
| TGTTTAATCAGTGGTTGAAA+TGG | - | tig0030213:40595-40614 | Msa1442830:intron | 30.0% | |
| AACCTCCCATTTCAAAATAA+AGG | + | tig0030213:40809-40828 | Msa1442820:intron | 30.0% | |
| TCCCATTTCAAAATAAAGGA+GGG | + | tig0030213:40813-40832 | Msa1442820:intron | 30.0% | |
| !!! | ACCCTCCTTTATTTTGAAAT+GGG | - | tig0030213:40817-40836 | Msa1442830:intron | 30.0% |
| !!! | AACCCTCCTTTATTTTGAAA+TGG | - | tig0030213:40818-40837 | Msa1442830:intron | 30.0% |
| ! | AAATTTTACACAGGGAAAGC+AGG | + | tig0030213:36695-36714 | Msa1442820:intron | 35.0% |
| GCTATTGTCATAAGCTATCT+TGG | + | tig0030213:36909-36928 | Msa1442820:intron | 35.0% | |
| GATATCTTGCAAGTGTATGA+TGG | + | tig0030213:37125-37144 | Msa1442820:intron | 35.0% | |
| !! | AAGATATTTGTTGTTGGTGC+AGG | - | tig0030213:37614-37633 | None:intergenic | 35.0% |
| !! | TGCTAAAATATAGCGGATAG+CGG | + | tig0030213:37815-37834 | Msa1442820:intron | 35.0% |
| GCCTAAGTCAATTTAGTTAC+TGG | + | tig0030213:37861-37880 | Msa1442820:intron | 35.0% | |
| GTGTGTTAATCATGAAGATG+AGG | + | tig0030213:37901-37920 | Msa1442820:intron | 35.0% | |
| CATCTGCATCGTAACATATT+TGG | - | tig0030213:37980-37999 | None:intergenic | 35.0% | |
| ATCTCACCAGGATAACATTA+AGG | + | tig0030213:38049-38068 | Msa1442820:CDS | 35.0% | |
| TTGGTAGAACCATCAAACAA+TGG | - | tig0030213:38113-38132 | None:intergenic | 35.0% | |
| CAACCTCTTGATCAGATATA+TGG | - | tig0030213:38366-38385 | None:intergenic | 35.0% | |
| ACTTGTTTGGATTCCAATTG+TGG | + | tig0030213:38450-38469 | Msa1442820:CDS | 35.0% | |
| TTGGATTCCAATTGTGGAAA+AGG | + | tig0030213:38456-38475 | Msa1442820:CDS | 35.0% | |
| TGGATTCCAATTGTGGAAAA+GGG | + | tig0030213:38457-38476 | Msa1442820:CDS | 35.0% | |
| TTAATGTACCTGATACTTGC+CGG | - | tig0030213:38571-38590 | None:intergenic | 35.0% | |
| AAGTATCAGGTACATTAAGG+AGG | + | tig0030213:38573-38592 | Msa1442820:CDS | 35.0% | |
| AGTACACATGATGTGGATTT+GGG | + | tig0030213:38666-38685 | Msa1442820:CDS | 35.0% | |
| ! | CTTATCCTTTCTCTAGCTTA+AGG | + | tig0030213:38698-38717 | Msa1442820:CDS | 35.0% |
| ! | CTCTTTGGAAAGATGAAACA+TGG | + | tig0030213:38728-38747 | Msa1442820:CDS | 35.0% |
| ! | CTTTGGAAAGATGAAACATG+GGG | + | tig0030213:38730-38749 | Msa1442820:CDS | 35.0% |
| CTAACCCAATCAAAGAGTAA+TGG | - | tig0030213:38784-38803 | None:intergenic | 35.0% | |
| GTGTATTTGATGAAGGAGAA+AGG | - | tig0030213:38900-38919 | None:intergenic | 35.0% | |
| AACTGTCGTGTATTTGATGA+AGG | - | tig0030213:38907-38926 | None:intergenic | 35.0% | |
| ! | CTATCAGTCTATCTTTAGGA+CGG | - | tig0030213:38945-38964 | None:intergenic | 35.0% |
| GTCCTAAAGATAGACTGATA+GGG | + | tig0030213:38944-38963 | Msa1442820:intron | 35.0% | |
| TCCTAAAGATAGACTGATAG+GGG | + | tig0030213:38945-38964 | Msa1442820:intron | 35.0% | |
| TTTGATTGTCCGGTCTAAAT+CGG | - | tig0030213:39136-39155 | None:intergenic | 35.0% | |
| GGCAAATACATATGCTTGTA+TGG | + | tig0030213:39239-39258 | Msa1442820:CDS | 35.0% | |
| ATACATATGCTTGTATGGAG+GGG | + | tig0030213:39244-39263 | Msa1442820:CDS | 35.0% | |
| AAGAACTCTACAAATTCCAC+TGG | + | tig0030213:39316-39335 | Msa1442820:CDS | 35.0% | |
| CACTGGAAATGATGTATGTA+GGG | + | tig0030213:39333-39352 | Msa1442820:CDS | 35.0% | |
| ! | GCTCAGATTTTCGTCATATA+TGG | - | tig0030213:39399-39418 | None:intergenic | 35.0% |
| GAACCAAATTATTGTTGGGT+CGG | - | tig0030213:39432-39451 | None:intergenic | 35.0% | |
| !! | TAATTTGGTTCTTCTGGGTT+AGG | + | tig0030213:39441-39460 | Msa1442820:CDS | 35.0% |
| ! | TTTAAAGTGCCTTGATGAGT+TGG | + | tig0030213:39628-39647 | Msa1442820:CDS | 35.0% |
| AAGGGTGATGTGAATGATAA+AGG | + | tig0030213:39659-39678 | Msa1442820:CDS | 35.0% | |
| TGTATGTAATCATCCATTGC+AGG | - | tig0030213:39692-39711 | None:intergenic | 35.0% | |
| GCAATGGATGATTACATACA+AGG | + | tig0030213:39692-39711 | Msa1442820:CDS | 35.0% | |
| TGTTACAATGATGTGGTTGT+TGG | - | tig0030213:39721-39740 | None:intergenic | 35.0% | |
| AACAACCACATCATTGTAAC+AGG | + | tig0030213:39720-39739 | Msa1442820:CDS | 35.0% | |
| TGTAACAGGTTAATACTTCC+AGG | + | tig0030213:39734-39753 | Msa1442820:CDS | 35.0% | |
| TTAATACTTCCAGGAGTTGA+TGG | + | tig0030213:39743-39762 | Msa1442820:CDS | 35.0% | |
| TATTTAGGGGTTAAGAAAGG+TGG | - | tig0030213:39867-39886 | None:intergenic | 35.0% | |
| GAATTCCAAATCTGAGCAAT+AGG | + | tig0030213:40198-40217 | Msa1442820:three_prime_UTR | 35.0% | |
| TTTCACCTATTGCTCAGATT+TGG | - | tig0030213:40206-40225 | Msa1442830:CDS | 35.0% | |
| TTGTTGAGACGTTTGCAATT+GGG | - | tig0030213:40281-40300 | Msa1442830:CDS | 35.0% | |
| TTTGTTGAGACGTTTGCAAT+TGG | - | tig0030213:40282-40301 | Msa1442830:CDS | 35.0% | |
| CTGGTAAAGGTAAAAAGGAT+AGG | - | tig0030213:40389-40408 | Msa1442830:CDS | 35.0% | |
| GGAGTAATTTCATCTGGTAA+AGG | - | tig0030213:40402-40421 | Msa1442830:CDS | 35.0% | |
| CTATTACGAATCACAAGGAA+TGG | - | tig0030213:40478-40497 | Msa1442830:CDS | 35.0% | |
| CATTCCTTGTGATTCGTAAT+AGG | + | tig0030213:40476-40495 | Msa1442820:three_prime_UTR | 35.0% | |
| ! | TCAGGTATAGAAGGTACATT+TGG | + | tig0030213:40555-40574 | Msa1442820:three_prime_UTR | 35.0% |
| ! | TATAGAAGGTACATTTGGCT+TGG | + | tig0030213:40560-40579 | Msa1442820:three_prime_UTR | 35.0% |
| ATTGAAATGTACCAGTAGAC+AGG | + | tig0030213:40704-40723 | Msa1442820:intron | 35.0% | |
| CCAAAAAAACCAGTCTCTAA+CGG | - | tig0030213:40763-40782 | Msa1442830:intron | 35.0% | |
| !!! | CTCCTTTATTTTGAAATGGG+AGG | - | tig0030213:40814-40833 | Msa1442830:intron | 35.0% |
| CTCCCATTTCAAAATAAAGG+AGG | + | tig0030213:40812-40831 | Msa1442820:intron | 35.0% | |
| ! | GAATTGTTGTTGCTTCACAA+TGG | - | tig0030213:40843-40862 | Msa1442830:intron | 35.0% |
| GACAATAAAACAAACTGCGA+TGG | + | tig0030213:40906-40925 | Msa1442820:intron | 35.0% | |
| TAGTCGAATTAACCCAGTTG+TGG | + | tig0030213:36358-36377 | Msa1442820:five_prime_UTR | 40.0% | |
| ATCACTAGTTCACCACAACT+GGG | - | tig0030213:36373-36392 | None:intergenic | 40.0% | |
| ! | GTTTTCGGCATCAGATGATA+CGG | + | tig0030213:36466-36485 | Msa1442820:CDS | 40.0% |
| TTCTTCAATTGGAGCATGAG+TGG | - | tig0030213:36513-36532 | None:intergenic | 40.0% | |
| CACATACCTGAATGATGTCA+GGG | - | tig0030213:36601-36620 | None:intergenic | 40.0% | |
| ACACATACCTGAATGATGTC+AGG | - | tig0030213:36602-36621 | None:intergenic | 40.0% | |
| GTCAAATAAGTCAGACTCGT+TGG | - | tig0030213:36748-36767 | None:intergenic | 40.0% | |
| ! | ATGCAACCGATTTAGCAAGA+CGG | - | tig0030213:37296-37315 | None:intergenic | 40.0% |
| TGGTTCACAGCTTCGAATTT+AGG | - | tig0030213:37366-37385 | None:intergenic | 40.0% | |
| GCAATCAGTAACATCCAACA+TGG | - | tig0030213:37400-37419 | None:intergenic | 40.0% | |
| ! | TCATGGTCAATGTACTGATC+AGG | - | tig0030213:37444-37463 | None:intergenic | 40.0% |
| AACAGCACTAGGAATAAGAG+TGG | - | tig0030213:37490-37509 | None:intergenic | 40.0% | |
| ATCGTCCAATAAACAGCACT+AGG | - | tig0030213:37501-37520 | None:intergenic | 40.0% | |
| !! | GTGCTGTTTATTGGACGATT+AGG | + | tig0030213:37502-37521 | Msa1442820:CDS | 40.0% |
| !! | TTGGACGATTAGGAGTATTG+TGG | + | tig0030213:37512-37531 | Msa1442820:CDS | 40.0% |
| ! | GCATGTGCATCCCATATTTT+CGG | + | tig0030213:37534-37553 | Msa1442820:CDS | 40.0% |
| ! | TCCCATATTTTCGGCATCAT+TGG | + | tig0030213:37543-37562 | Msa1442820:CDS | 40.0% |
| GCCAATGATGCCGAAAATAT+GGG | - | tig0030213:37547-37566 | None:intergenic | 40.0% | |
| AGCCAATGATGCCGAAAATA+TGG | - | tig0030213:37548-37567 | None:intergenic | 40.0% | |
| !! | TATTTTCGGCATCATTGGCT+TGG | + | tig0030213:37548-37567 | Msa1442820:CDS | 40.0% |
| !!! | ATTTTCGGCATCATTGGCTT+GGG | + | tig0030213:37549-37568 | Msa1442820:CDS | 40.0% |
| TGACATCAACAACAGAGACA+TGG | + | tig0030213:37693-37712 | Msa1442820:CDS | 40.0% | |
| GACATCAACAACAGAGACAT+GGG | + | tig0030213:37694-37713 | Msa1442820:CDS | 40.0% | |
| ACCTAAATGTTGACGACAGA+TGG | - | tig0030213:37780-37799 | None:intergenic | 40.0% | |
| GATGAGGAAGAAACACTGTA+TGG | + | tig0030213:37917-37936 | Msa1442820:intron | 40.0% | |
| ! | AAAAGCTTTGATTCGCTGCA+AGG | + | tig0030213:38076-38095 | Msa1442820:CDS | 40.0% |
| GAACCATCAAACAATGGCAA+CGG | - | tig0030213:38107-38126 | None:intergenic | 40.0% | |
| ! | TTGATGGTTCTACCAAGCAA+AGG | + | tig0030213:38117-38136 | Msa1442820:CDS | 40.0% |
| ! | TGATGGTTCTACCAAGCAAA+GGG | + | tig0030213:38118-38137 | Msa1442820:CDS | 40.0% |
| TTCTATGCTAACCCTTTGCT+TGG | - | tig0030213:38132-38151 | None:intergenic | 40.0% | |
| CTTGATCAGATATATGGTGG+AGG | - | tig0030213:38360-38379 | None:intergenic | 40.0% | |
| CCTCTTGATCAGATATATGG+TGG | - | tig0030213:38363-38382 | None:intergenic | 40.0% | |
| CCACCATATATCTGATCAAG+AGG | + | tig0030213:38360-38379 | Msa1442820:CDS | 40.0% | |
| AGTTTATGACCCTTCACTTC+TGG | + | tig0030213:38543-38562 | Msa1442820:CDS | 40.0% | |
| GGCAAGTATCAGGTACATTA+AGG | + | tig0030213:38570-38589 | Msa1442820:CDS | 40.0% | |
| ACATCATGTGTACTGCATTC+AGG | - | tig0030213:38660-38679 | None:intergenic | 40.0% | |
| TGAATGCAGTACACATGATG+TGG | + | tig0030213:38659-38678 | Msa1442820:CDS | 40.0% | |
| CAGTACACATGATGTGGATT+TGG | + | tig0030213:38665-38684 | Msa1442820:CDS | 40.0% | |
| GTACACATGATGTGGATTTG+GGG | + | tig0030213:38667-38686 | Msa1442820:CDS | 40.0% | |
| CGTCCTAAAGATAGACTGAT+AGG | + | tig0030213:38943-38962 | Msa1442820:intron | 40.0% | |
| TCCCCTATCAGTCTATCTTT+AGG | - | tig0030213:38949-38968 | None:intergenic | 40.0% | |
| !!! | TTTTGGGATCCAGATTCCAT+GGG | + | tig0030213:39008-39027 | Msa1442820:intron | 40.0% |
| CATGTAATTCCCATGGAATC+TGG | - | tig0030213:39020-39039 | None:intergenic | 40.0% | |
| ! | CACAAGTGCTGCAAAATCAA+TGG | + | tig0030213:39292-39311 | Msa1442820:CDS | 40.0% |
| CCTACATACATCATTTCCAG+TGG | - | tig0030213:39335-39354 | None:intergenic | 40.0% | |
| CCACTGGAAATGATGTATGT+AGG | + | tig0030213:39332-39351 | Msa1442820:CDS | 40.0% | |
| GATCACTGCTATCAAAGCTT+AGG | - | tig0030213:39547-39566 | None:intergenic | 40.0% | |
| ! | AGCTTTGATAGCAGTGATCT+TGG | + | tig0030213:39548-39567 | Msa1442820:CDS | 40.0% |
| ! | TTGATAGCAGTGATCTTGGT+TGG | + | tig0030213:39552-39571 | Msa1442820:CDS | 40.0% |
| TGATAGCAGTGATCTTGGTT+GGG | + | tig0030213:39553-39572 | Msa1442820:CDS | 40.0% | |
| GGTTGGGCTATAATAAGTCA+AGG | + | tig0030213:39569-39588 | Msa1442820:CDS | 40.0% | |
| ! | TAAAGGAGTTTTGCCTGCAA+TGG | + | tig0030213:39676-39695 | Msa1442820:CDS | 40.0% |
| TCAGCACATACAATCTTGTC+TGG | - | tig0030213:39776-39795 | None:intergenic | 40.0% | |
| AAGATTGTATGTGCTGAGTG+TGG | + | tig0030213:39779-39798 | Msa1442820:CDS | 40.0% | |
| ! | TGTAGAACTTTTCCATTGGC+TGG | - | tig0030213:39805-39824 | None:intergenic | 40.0% |
| ! | AAGGGTGCAAAATGTCATTG+AGG | + | tig0030213:40150-40169 | Msa1442820:three_prime_UTR | 40.0% |
| AGGGTGCAAAATGTCATTGA+GGG | + | tig0030213:40151-40170 | Msa1442820:three_prime_UTR | 40.0% | |
| TCATTGAGGGGTAGATTTAG+TGG | + | tig0030213:40164-40183 | Msa1442820:three_prime_UTR | 40.0% | |
| GCAATAGGTGAAAGAATGTG+AGG | + | tig0030213:40213-40232 | Msa1442820:three_prime_UTR | 40.0% | |
| ! | TTTGCAATTGGGGTTGTTTC+TGG | - | tig0030213:40270-40289 | Msa1442830:CDS | 40.0% |
| TGTTGAGACGTTTGCAATTG+GGG | - | tig0030213:40280-40299 | Msa1442830:CDS | 40.0% | |
| ATGAAGCTTGATACTAAGCC+TGG | - | tig0030213:40306-40325 | Msa1442830:CDS | 40.0% | |
| !! | GATTTACAGAAGGCGTTGTT+TGG | - | tig0030213:40423-40442 | Msa1442830:CDS | 40.0% |
| GGTCATAGAGGATTTACAGA+AGG | - | tig0030213:40433-40452 | Msa1442830:CDS | 40.0% | |
| ATCCTCTATGACCTTCAATG+AGG | + | tig0030213:40440-40459 | Msa1442820:three_prime_UTR | 40.0% | |
| TTCACAAGAAGCCTCATTGA+AGG | - | tig0030213:40454-40473 | Msa1442830:CDS | 40.0% | |
| GATATCAATTCCTTTGGCGA+AGG | + | tig0030213:40498-40517 | Msa1442820:three_prime_UTR | 40.0% | |
| AAAGAAGATTCCTTCGCCAA+AGG | - | tig0030213:40511-40530 | Msa1442830:CDS | 40.0% | |
| !!! | CCGTTAGAGACTGGTTTTTT+TGG | + | tig0030213:40760-40779 | Msa1442820:intron | 40.0% |
| !!! | CAGCTTTTGATTTTGCCTTG+CGG | + | tig0030213:41167-41186 | Msa1442820:three_prime_UTR | 40.0% |
| GATCACTAGTTCACCACAAC+TGG | - | tig0030213:36374-36393 | None:intergenic | 45.0% | |
| ! | AGCTATGCGCCACATGTTTT+CGG | + | tig0030213:36451-36470 | Msa1442820:CDS | 45.0% |
| CATCTGATGCCGAAAACATG+TGG | - | tig0030213:36463-36482 | None:intergenic | 45.0% | |
| TCTCATCCCTGACATCATTC+AGG | + | tig0030213:36592-36611 | Msa1442820:CDS | 45.0% | |
| !! | GGTGCAAATGGGTGTCATTA+AGG | + | tig0030213:36716-36735 | Msa1442820:CDS | 45.0% |
| GCATGCTAATGCATGGAGAT+GGG | - | tig0030213:36824-36843 | None:intergenic | 45.0% | |
| TGCATGCTAATGCATGGAGA+TGG | - | tig0030213:36825-36844 | None:intergenic | 45.0% | |
| ! | TCTTGCAAGTGTATGATGGG+TGG | + | tig0030213:37129-37148 | Msa1442820:CDS | 45.0% |
| !! | CTTGCAAGTGTATGATGGGT+GGG | + | tig0030213:37130-37149 | Msa1442820:CDS | 45.0% |
| !! | TTGCAAGTGTATGATGGGTG+GGG | + | tig0030213:37131-37150 | Msa1442820:CDS | 45.0% |
| TCCAAGTATTCCTATGGCTG+TGG | - | tig0030213:37169-37188 | None:intergenic | 45.0% | |
| AAGCTATTCATGGGATGCCA+AGG | + | tig0030213:37197-37216 | Msa1442820:CDS | 45.0% | |
| TGCTAATGCTATCACCACCT+TGG | - | tig0030213:37217-37236 | None:intergenic | 45.0% | |
| CACCAACCGTCTTGCTAAAT+CGG | + | tig0030213:37287-37306 | Msa1442820:CDS | 45.0% | |
| ! | AACCGATTTAGCAAGACGGT+TGG | - | tig0030213:37292-37311 | None:intergenic | 45.0% |
| AGCTGTGAACCATCTTCTCA+AGG | + | tig0030213:37374-37393 | Msa1442820:CDS | 45.0% | |
| ! | TCAACGTTTCAGGTGCTTCA+TGG | - | tig0030213:37461-37480 | None:intergenic | 45.0% |
| ! | GTCTAGCTTCTGAGTCAAAC+TGG | - | tig0030213:37726-37745 | None:intergenic | 45.0% |
| CAGAAGCTAGACAGCATGAA+TGG | + | tig0030213:37734-37753 | Msa1442820:CDS | 45.0% | |
| !! | AGATGGCGAGCTGATTTTGA+AGG | - | tig0030213:37763-37782 | None:intergenic | 45.0% |
| GCCATCTGTCGTCAACATTT+AGG | + | tig0030213:37776-37795 | Msa1442820:CDS | 45.0% | |
| CCTGGTGAGATGTCTCAAAA+AGG | - | tig0030213:38040-38059 | None:intergenic | 45.0% | |
| !!! | CCTTTTTGAGACATCTCACC+AGG | + | tig0030213:38037-38056 | Msa1442820:CDS | 45.0% |
| GATCCGTTGCCATTGTTTGA+TGG | + | tig0030213:38101-38120 | Msa1442820:CDS | 45.0% | |
| ACACCTCAATGCTAACCTGA+AGG | - | tig0030213:38303-38322 | None:intergenic | 45.0% | |
| !! | AGGTTAGCATTGAGGTGTTG+AGG | + | tig0030213:38305-38324 | Msa1442820:intron | 45.0% |
| AATCGCGCCAAGATTCAACA+AGG | + | tig0030213:38410-38429 | Msa1442820:CDS | 45.0% | |
| ! | AAGGCTCCCTTTTCCACAAT+TGG | - | tig0030213:38466-38485 | None:intergenic | 45.0% |
| !!! | CTGTTTTGTTTCGGTCCACA+AGG | - | tig0030213:38485-38504 | None:intergenic | 45.0% |
| GACTGCAATCAATGATGCCA+TGG | + | tig0030213:38515-38534 | Msa1442820:CDS | 45.0% | |
| GGGTCATAAACTGAGTACCA+TGG | - | tig0030213:38535-38554 | None:intergenic | 45.0% | |
| TCAGGTACATTAAGGAGGTG+TGG | + | tig0030213:38578-38597 | Msa1442820:CDS | 45.0% | |
| CAACACAAAGCCTATGCTTG+TGG | + | tig0030213:38606-38625 | Msa1442820:CDS | 45.0% | |
| AAAGCCTATGCTTGTGGTGT+TGG | + | tig0030213:38612-38631 | Msa1442820:CDS | 45.0% | |
| ! | TCCTTTCTCTAGCTTAAGGG+AGG | + | tig0030213:38702-38721 | Msa1442820:CDS | 45.0% |
| TCCTCCCTTAAGCTAGAGAA+AGG | - | tig0030213:38706-38725 | None:intergenic | 45.0% | |
| AACATGGGGACTTGCACTAT+TGG | + | tig0030213:38744-38763 | Msa1442820:CDS | 45.0% | |
| !! | AGTCTATCTTTAGGACGGTG+AGG | - | tig0030213:38940-38959 | None:intergenic | 45.0% |
| !!! | CTTTTGGGATCCAGATTCCA+TGG | + | tig0030213:39007-39026 | Msa1442820:intron | 45.0% |
| ! | TCATTGTTTCAGGTAACGGC+AGG | + | tig0030213:39218-39237 | Msa1442820:intron | 45.0% |
| CTTGTATGGAGGGGATGATA+TGG | + | tig0030213:39253-39272 | Msa1442820:CDS | 45.0% | |
| ATGGAGGGGATGATATGGAA+TGG | + | tig0030213:39258-39277 | Msa1442820:CDS | 45.0% | |
| GGGATGATATGGAATGGATC+AGG | + | tig0030213:39264-39283 | Msa1442820:CDS | 45.0% | |
| TATGTAGGGAAAAGCAACCC+AGG | + | tig0030213:39347-39366 | Msa1442820:CDS | 45.0% | |
| TCGCCGACCCAACAATAATT+TGG | + | tig0030213:39426-39445 | Msa1442820:CDS | 45.0% | |
| AGGCACAGTAAGAATGACAC+AGG | + | tig0030213:39589-39608 | Msa1442820:CDS | 45.0% | |
| GGCACAGTAAGAATGACACA+GGG | + | tig0030213:39590-39609 | Msa1442820:CDS | 45.0% | |
| GTAAGAATGACACAGGGCAA+AGG | + | tig0030213:39596-39615 | Msa1442820:CDS | 45.0% | |
| TCCACTCATCCAACTCATCA+AGG | - | tig0030213:39640-39659 | None:intergenic | 45.0% | |
| ! | TGATGAGTTGGATGAGTGGA+AGG | + | tig0030213:39640-39659 | Msa1442820:CDS | 45.0% |
| ! | GATGAGTTGGATGAGTGGAA+GGG | + | tig0030213:39641-39660 | Msa1442820:CDS | 45.0% |
| GGAATTGTTCCATCAACTCC+TGG | - | tig0030213:39755-39774 | None:intergenic | 45.0% | |
| GGGTGCAAAATGTCATTGAG+GGG | + | tig0030213:40152-40171 | Msa1442820:three_prime_UTR | 45.0% | |
| !! | GGTGCTGCTCTTAATGGAAT+TGG | - | tig0030213:40249-40268 | Msa1442830:CDS | 45.0% |
| !! | GTTTCTGGTGCTGCTCTTAA+TGG | - | tig0030213:40255-40274 | Msa1442830:CDS | 45.0% |
| GCAAACGTCTCAACAAATCC+AGG | + | tig0030213:40285-40304 | Msa1442820:three_prime_UTR | 45.0% | |
| AGCCTCATTGAAGGTCATAG+AGG | - | tig0030213:40445-40464 | Msa1442830:CDS | 45.0% | |
| GAAATGTACCAGTAGACAGG+TGG | + | tig0030213:40707-40726 | Msa1442820:intron | 45.0% | |
| GCTTTCGTTGACACGTACTT+CGG | + | tig0030213:41003-41022 | Msa1442820:intron | 45.0% | |
| !! | TTTGATTTTGCCTTGCGGCT+AGG | + | tig0030213:41172-41191 | Msa1442820:three_prime_UTR | 45.0% |
| ! | TTGATTTTGCCTTGCGGCTA+GGG | + | tig0030213:41173-41192 | Msa1442820:three_prime_UTR | 45.0% |
| ! | GCTCTAGATTGGTTCTTCCG+TGG | - | tig0030213:36434-36453 | None:intergenic | 50.0% |
| !! | TGTGGCGCATAGCTCTAGAT+TGG | - | tig0030213:36445-36464 | None:intergenic | 50.0% |
| ACAGGGAAAGCAGGTGCAAA+TGG | + | tig0030213:36704-36723 | Msa1442820:intron | 50.0% | |
| CAGGGAAAGCAGGTGCAAAT+GGG | + | tig0030213:36705-36724 | Msa1442820:intron | 50.0% | |
| GCTAATGCATGGAGATGGGA+GGG | - | tig0030213:36820-36839 | None:intergenic | 50.0% | |
| TGCTAATGCATGGAGATGGG+AGG | - | tig0030213:36821-36840 | None:intergenic | 50.0% | |
| !! | TGCAAGTGTATGATGGGTGG+GGG | + | tig0030213:37132-37151 | Msa1442820:CDS | 50.0% |
| GCCACAGCCATAGGAATACT+TGG | + | tig0030213:37165-37184 | Msa1442820:CDS | 50.0% | |
| CTATTCATGGGATGCCAAGG+TGG | + | tig0030213:37200-37219 | Msa1442820:CDS | 50.0% | |
| CAGCATTTGCAGCCAACCTA+GGG | + | tig0030213:37235-37254 | Msa1442820:CDS | 50.0% | |
| AGCATTTGCAGCCAACCTAG+GGG | + | tig0030213:37236-37255 | Msa1442820:CDS | 50.0% | |
| AAGCCAGAATTCCCCTAGGT+TGG | - | tig0030213:37250-37269 | None:intergenic | 50.0% | |
| CTACAAGCCAGAATTCCCCT+AGG | - | tig0030213:37254-37273 | None:intergenic | 50.0% | |
| CGATTTAGCAAGACGGTTGG+TGG | - | tig0030213:37289-37308 | None:intergenic | 50.0% | |
| ! | CCAACATGGCCTTGAGAAGA+TGG | - | tig0030213:37386-37405 | None:intergenic | 50.0% |
| CCATCTTCTCAAGGCCATGT+TGG | + | tig0030213:37383-37402 | Msa1442820:CDS | 50.0% | |
| GTGGAAGCAGTCAACGTTTC+AGG | - | tig0030213:37471-37490 | None:intergenic | 50.0% | |
| !! | GCATCATTGGCTTGGGTCAA+GGG | + | tig0030213:37556-37575 | Msa1442820:CDS | 50.0% |
| ! | CTGCCTTCAGGTTAGCATTG+AGG | + | tig0030213:38297-38316 | Msa1442820:intron | 50.0% |
| TTGTGGAAAAGGGAGCCTTG+TGG | + | tig0030213:38467-38486 | Msa1442820:CDS | 50.0% | |
| GGATCCAACACCACAAGCAT+AGG | - | tig0030213:38619-38638 | None:intergenic | 50.0% | |
| ! | CTTGTGGTGTTGGATCCACA+GGG | + | tig0030213:38622-38641 | Msa1442820:CDS | 50.0% |
| ! | TTGTGGTGTTGGATCCACAG+GGG | + | tig0030213:38623-38642 | Msa1442820:CDS | 50.0% |
| GATGTGGATTTGGGGAAGCA+TGG | + | tig0030213:38675-38694 | Msa1442820:CDS | 50.0% | |
| GCTTAAGGGAGGAAGCTCTT+TGG | + | tig0030213:38713-38732 | Msa1442820:CDS | 50.0% | |
| !! | TCTTGGCCACCGATTTAGAC+CGG | + | tig0030213:39124-39143 | Msa1442820:intron | 50.0% |
| GATTGTCCGGTCTAAATCGG+TGG | - | tig0030213:39133-39152 | None:intergenic | 50.0% | |
| TGCGTCACGCAATTACTGCA+TGG | + | tig0030213:39165-39184 | Msa1442820:intron | 50.0% | |
| ! | GGGTTAGGCTTGAAAGCATG+TGG | + | tig0030213:39456-39475 | Msa1442820:CDS | 50.0% |
| ! | GCCTTGATGAGTTGGATGAG+TGG | + | tig0030213:39636-39655 | Msa1442820:CDS | 50.0% |
| AGGGGTAGATTTAGTGGCTG+AGG | + | tig0030213:40170-40189 | Msa1442820:three_prime_UTR | 50.0% | |
| TACACTGAGCCGTTAGAGAC+TGG | + | tig0030213:40751-40770 | Msa1442820:intron | 50.0% | |
| CAATTGGAGCATGAGTGGCG+CGG | - | tig0030213:36508-36527 | None:intergenic | 55.0% | |
| CAGGGATGAGAGAAGCTGCA+TGG | - | tig0030213:36583-36602 | None:intergenic | 55.0% | |
| GATGCTCATGCCACAGCCAT+AGG | + | tig0030213:37156-37175 | Msa1442820:CDS | 55.0% | |
| GCAGCATTTGCAGCCAACCT+AGG | + | tig0030213:37234-37253 | Msa1442820:CDS | 55.0% | |
| CAGCCAACCTAGGGGAATTC+TGG | + | tig0030213:37244-37263 | Msa1442820:CDS | 55.0% | |
| !! | GGCATCATTGGCTTGGGTCA+AGG | + | tig0030213:37555-37574 | Msa1442820:CDS | 55.0% |
| !! | TGACCCTTCACTTCTGGAGC+CGG | + | tig0030213:38549-38568 | Msa1442820:CDS | 55.0% |
| !! | TTGCCGGCTCCAGAAGTGAA+GGG | - | tig0030213:38555-38574 | None:intergenic | 55.0% |
| !! | TTCTGGAGCCGGCAAGTATC+AGG | + | tig0030213:38560-38579 | Msa1442820:CDS | 55.0% |
| ! | GCTTGTGGTGTTGGATCCAC+AGG | + | tig0030213:38621-38640 | Msa1442820:CDS | 55.0% |
| AGGTTCACAACCTTCCCCTG+TGG | - | tig0030213:38640-38659 | None:intergenic | 55.0% | |
| ACACTACGCCACCTGTCTAC+TGG | - | tig0030213:40718-40737 | Msa1442830:intron | 55.0% | |
| AGCGAAAAACCCTAGCCGCA+AGG | - | tig0030213:41185-41204 | Msa1442830:five_prime_UTR | 55.0% | |
| !! | CTTGCCGGCTCCAGAAGTGA+AGG | - | tig0030213:38556-38575 | None:intergenic | 60.0% |
| ! | GGTGTTGGATCCACAGGGGA+AGG | + | tig0030213:38627-38646 | Msa1442820:CDS | 60.0% |
| TGCTGAGTGTGGCCAGCCAA+TGG | + | tig0030213:39790-39809 | Msa1442820:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030213 | gene | 36349 | 41231 | 36349 | ID=Msa1442820;Name=Msa1442820 |
| tig0030213 | mRNA | 36349 | 41231 | 36349 | ID=Msa1442820-mRNA-1;Parent=Msa1442820;Name=Msa1442820-mRNA-1;_AED=0.11;_eAED=0.11;_QI=70|1|1|1|0.75|0.66|9|806|704 |
| tig0030213 | exon | 36349 | 36613 | 36349 | ID=Msa1442820-mRNA-1:exon:13525;Parent=Msa1442820-mRNA-1 |
| tig0030213 | exon | 36708 | 36812 | 36708 | ID=Msa1442820-mRNA-1:exon:13526;Parent=Msa1442820-mRNA-1 |
| tig0030213 | exon | 37126 | 37577 | 37126 | ID=Msa1442820-mRNA-1:exon:13527;Parent=Msa1442820-mRNA-1 |
| tig0030213 | exon | 37688 | 37797 | 37688 | ID=Msa1442820-mRNA-1:exon:13528;Parent=Msa1442820-mRNA-1 |
| tig0030213 | exon | 37997 | 38139 | 37997 | ID=Msa1442820-mRNA-1:exon:13529;Parent=Msa1442820-mRNA-1 |
| tig0030213 | exon | 38307 | 38798 | 38307 | ID=Msa1442820-mRNA-1:exon:13530;Parent=Msa1442820-mRNA-1 |
| tig0030213 | exon | 39230 | 39990 | 39230 | ID=Msa1442820-mRNA-1:exon:13531;Parent=Msa1442820-mRNA-1 |
| tig0030213 | exon | 40019 | 40603 | 40019 | ID=Msa1442820-mRNA-1:exon:13532;Parent=Msa1442820-mRNA-1 |
| tig0030213 | exon | 41154 | 41231 | 41154 | ID=Msa1442820-mRNA-1:exon:13533;Parent=Msa1442820-mRNA-1 |
| tig0030213 | five_prime_UTR | 36349 | 36418 | 36349 | ID=Msa1442820-mRNA-1:five_prime_utr;Parent=Msa1442820-mRNA-1 |
| tig0030213 | CDS | 36419 | 36613 | 36419 | ID=Msa1442820-mRNA-1:cds;Parent=Msa1442820-mRNA-1 |
| tig0030213 | CDS | 36708 | 36812 | 36708 | ID=Msa1442820-mRNA-1:cds;Parent=Msa1442820-mRNA-1 |
| tig0030213 | CDS | 37126 | 37577 | 37126 | ID=Msa1442820-mRNA-1:cds;Parent=Msa1442820-mRNA-1 |
| tig0030213 | CDS | 37688 | 37797 | 37688 | ID=Msa1442820-mRNA-1:cds;Parent=Msa1442820-mRNA-1 |
| tig0030213 | CDS | 37997 | 38139 | 37997 | ID=Msa1442820-mRNA-1:cds;Parent=Msa1442820-mRNA-1 |
| tig0030213 | CDS | 38307 | 38798 | 38307 | ID=Msa1442820-mRNA-1:cds;Parent=Msa1442820-mRNA-1 |
| tig0030213 | CDS | 39230 | 39847 | 39230 | ID=Msa1442820-mRNA-1:cds;Parent=Msa1442820-mRNA-1 |
| tig0030213 | three_prime_UTR | 39848 | 39990 | 39848 | ID=Msa1442820-mRNA-1:three_prime_utr;Parent=Msa1442820-mRNA-1 |
| tig0030213 | three_prime_UTR | 40019 | 40603 | 40019 | ID=Msa1442820-mRNA-1:three_prime_utr;Parent=Msa1442820-mRNA-1 |
| tig0030213 | three_prime_UTR | 41154 | 41231 | 41154 | ID=Msa1442820-mRNA-1:three_prime_utr;Parent=Msa1442820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
