Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189700 | KAF4397433.1 | 99.048 | 105 | 1 | 0 | 1 | 105 | 50 | 154 | 2.20e-68 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189700 | sp|Q96499|RL44_GOSHI | 97.143 | 105 | 3 | 0 | 1 | 105 | 1 | 105 | 4.34e-69 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189700 | A0A7J6HQ78 | 99.048 | 105 | 1 | 0 | 1 | 105 | 50 | 154 | 1.05e-68 | 212 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0189700 | 0.837284 | 5.690385e-57 | -8.615850e-47 |
| Msa0002750 | Msa0189700 | 0.880883 | 3.801956e-70 | -8.615850e-47 |
| Msa0002790 | Msa0189700 | 0.869282 | 3.479311e-66 | -8.615850e-47 |
| Msa0003720 | Msa0189700 | 0.823043 | 1.713015e-53 | -8.615850e-47 |
| Msa0003780 | Msa0189700 | 0.819621 | 1.055183e-52 | -8.615850e-47 |
| Msa0027260 | Msa0189700 | 0.863476 | 2.422549e-64 | -8.615850e-47 |
| Msa0029630 | Msa0189700 | 0.802898 | 4.509855e-49 | -8.615850e-47 |
| Msa0032780 | Msa0189700 | 0.812780 | 3.567904e-51 | -8.615850e-47 |
| Msa0040690 | Msa0189700 | 0.821624 | 3.656500e-53 | -8.615850e-47 |
| Msa0042280 | Msa0189700 | 0.831085 | 2.038027e-55 | -8.615850e-47 |
| Msa0047160 | Msa0189700 | 0.825409 | 4.762846e-54 | -8.615850e-47 |
| Msa0048180 | Msa0189700 | 0.853975 | 1.674703e-61 | -8.615850e-47 |
| Msa0049370 | Msa0189700 | 0.844602 | 6.829960e-59 | -8.615850e-47 |
| Msa0055180 | Msa0189700 | 0.806741 | 7.098228e-50 | -8.615850e-47 |
| Msa0055190 | Msa0189700 | 0.816762 | 4.679669e-52 | -8.615850e-47 |
| Msa0056470 | Msa0189700 | 0.859251 | 4.707893e-63 | -8.615850e-47 |
| Msa0059040 | Msa0189700 | 0.804118 | 2.518499e-49 | -8.615850e-47 |
| Msa0059110 | Msa0189700 | 0.803544 | 3.314607e-49 | -8.615850e-47 |
| Msa0072420 | Msa0189700 | 0.814384 | 1.583759e-51 | -8.615850e-47 |
| Msa0074030 | Msa0189700 | 0.855047 | 8.200080e-62 | -8.615850e-47 |
| Msa0075170 | Msa0189700 | 0.825777 | 3.895231e-54 | -8.615850e-47 |
| Msa0076040 | Msa0189700 | 0.822867 | 1.882246e-53 | -8.615850e-47 |
| Msa0086750 | Msa0189700 | 0.895212 | 1.187667e-75 | -8.615850e-47 |
| Msa0090520 | Msa0189700 | 0.822482 | 2.313890e-53 | -8.615850e-47 |
| Msa0093850 | Msa0189700 | 0.807549 | 4.788534e-50 | -8.615850e-47 |
| Msa0094470 | Msa0189700 | 0.837317 | 5.580783e-57 | -8.615850e-47 |
| Msa0100740 | Msa0189700 | 0.839482 | 1.543183e-57 | -8.615850e-47 |
| Msa0105370 | Msa0189700 | 0.850066 | 2.159407e-60 | -8.615850e-47 |
| Msa0114870 | Msa0189700 | 0.854312 | 1.338265e-61 | -8.615850e-47 |
| Msa0116670 | Msa0189700 | 0.829264 | 5.672752e-55 | -8.615850e-47 |
| Msa0118710 | Msa0189700 | 0.805594 | 1.238000e-49 | -8.615850e-47 |
| Msa0125450 | Msa0189700 | 0.816176 | 6.328964e-52 | -8.615850e-47 |
| Msa0125540 | Msa0189700 | 0.812477 | 4.157264e-51 | -8.615850e-47 |
| Msa0128860 | Msa0189700 | 0.862120 | 6.345867e-64 | -8.615850e-47 |
| Msa0133540 | Msa0189700 | 0.810836 | 9.455791e-51 | -8.615850e-47 |
| Msa0137990 | Msa0189700 | 0.826277 | 2.963849e-54 | -8.615850e-47 |
| Msa0140820 | Msa0189700 | 0.871846 | 5.004452e-67 | -8.615850e-47 |
| Msa0140850 | Msa0189700 | 0.860587 | 1.861957e-63 | -8.615850e-47 |
| Msa0146280 | Msa0189700 | 0.817644 | 2.962702e-52 | -8.615850e-47 |
| Msa0146340 | Msa0189700 | 0.830457 | 2.905557e-55 | -8.615850e-47 |
| Msa0148060 | Msa0189700 | 0.813051 | 3.112341e-51 | -8.615850e-47 |
| Msa0149200 | Msa0189700 | 0.807211 | 5.646423e-50 | -8.615850e-47 |
| Msa0150300 | Msa0189700 | 0.811223 | 7.796961e-51 | -8.615850e-47 |
| Msa0163760 | Msa0189700 | 0.830798 | 2.396968e-55 | -8.615850e-47 |
| Msa0172900 | Msa0189700 | 0.828079 | 1.097222e-54 | -8.615850e-47 |
| Msa0173530 | Msa0189700 | 0.833337 | 5.650321e-56 | -8.615850e-47 |
| Msa0174730 | Msa0189700 | 0.863600 | 2.218128e-64 | -8.615850e-47 |
| Msa0179030 | Msa0189700 | 0.826415 | 2.747256e-54 | -8.615850e-47 |
| Msa0183090 | Msa0189700 | 0.824356 | 8.439110e-54 | -8.615850e-47 |
| Msa0183900 | Msa0189700 | 0.827914 | 1.202424e-54 | -8.615850e-47 |
| Msa0187930 | Msa0189700 | 0.817787 | 2.751444e-52 | -8.615850e-47 |
| Msa0188350 | Msa0189700 | 0.845764 | 3.313213e-59 | -8.615850e-47 |
| Msa0188690 | Msa0189700 | 0.839354 | 1.666398e-57 | -8.615850e-47 |
| Msa0189700 | Msa0194540 | 0.811389 | 7.176128e-51 | -8.615850e-47 |
| Msa0189700 | Msa0199880 | 0.805522 | 1.281972e-49 | -8.615850e-47 |
| Msa0189700 | Msa0204960 | 0.806581 | 7.672267e-50 | -8.615850e-47 |
| Msa0189700 | Msa0218830 | 0.818736 | 1.677246e-52 | -8.615850e-47 |
| Msa0189700 | Msa0221030 | 0.819279 | 1.262282e-52 | -8.615850e-47 |
| Msa0189700 | Msa0223080 | 0.809721 | 1.644815e-50 | -8.615850e-47 |
| Msa0189700 | Msa0229760 | 0.818943 | 1.505481e-52 | -8.615850e-47 |
| Msa0189700 | Msa0230490 | 0.865141 | 7.321816e-65 | -8.615850e-47 |
| Msa0189700 | Msa0231100 | 0.843046 | 1.781988e-58 | -8.615850e-47 |
| Msa0189700 | Msa0232010 | 0.997946 | 1.347108e-252 | -8.615850e-47 |
| Msa0189700 | Msa0232080 | 0.997077 | 1.578201e-236 | -8.615850e-47 |
| Msa0189700 | Msa0244780 | 0.821049 | 4.963105e-53 | -8.615850e-47 |
| Msa0189700 | Msa0249580 | 0.816001 | 6.924345e-52 | -8.615850e-47 |
| Msa0189700 | Msa0250820 | 0.858845 | 6.228609e-63 | -8.615850e-47 |
| Msa0189700 | Msa0250870 | 0.819948 | 8.881858e-53 | -8.615850e-47 |
| Msa0189700 | Msa0257450 | 0.839659 | 1.388608e-57 | -8.615850e-47 |
| Msa0189700 | Msa0258390 | 0.835647 | 1.485534e-56 | -8.615850e-47 |
| Msa0189700 | Msa0258850 | 0.808823 | 2.562476e-50 | -8.615850e-47 |
| Msa0189700 | Msa0262480 | 0.818352 | 2.049750e-52 | -8.615850e-47 |
| Msa0189700 | Msa0264010 | 0.822959 | 1.791436e-53 | -8.615850e-47 |
| Msa0189700 | Msa0268130 | 0.814297 | 1.655663e-51 | -8.615850e-47 |
| Msa0189700 | Msa0270210 | 0.819559 | 1.089965e-52 | -8.615850e-47 |
| Msa0189700 | Msa0280610 | 0.824768 | 6.748471e-54 | -8.615850e-47 |
| Msa0189700 | Msa0281530 | 0.821423 | 4.070171e-53 | -8.615850e-47 |
| Msa0189700 | Msa0284180 | 0.800761 | 1.238144e-48 | -8.615850e-47 |
| Msa0189700 | Msa0289580 | 0.866365 | 3.006745e-65 | -8.615850e-47 |
| Msa0189700 | Msa0289610 | 0.861839 | 7.738006e-64 | -8.615850e-47 |
| Msa0189700 | Msa0296720 | 0.817092 | 3.945765e-52 | -8.615850e-47 |
| Msa0189700 | Msa0297610 | 0.800107 | 1.683383e-48 | -8.615850e-47 |
| Msa0189700 | Msa0298200 | 0.800666 | 1.295093e-48 | -8.615850e-47 |
| Msa0189700 | Msa0298990 | 0.821010 | 5.066927e-53 | -8.615850e-47 |
| Msa0189700 | Msa0300350 | 0.808804 | 2.586423e-50 | -8.615850e-47 |
| Msa0189700 | Msa0302160 | 0.811134 | 8.147860e-51 | -8.615850e-47 |
| Msa0189700 | Msa0305780 | 0.823598 | 1.270779e-53 | -8.615850e-47 |
| Msa0189700 | Msa0307850 | 0.846735 | 1.801522e-59 | -8.615850e-47 |
| Msa0189700 | Msa0317910 | 0.840359 | 9.117730e-58 | -8.615850e-47 |
| Msa0189700 | Msa0326480 | 0.806763 | 7.024682e-50 | -8.615850e-47 |
| Msa0189700 | Msa0327300 | 0.858286 | 9.144043e-63 | -8.615850e-47 |
| Msa0189700 | Msa0327330 | 0.849608 | 2.898714e-60 | -8.615850e-47 |
| Msa0189700 | Msa0335730 | 0.836813 | 7.509324e-57 | -8.615850e-47 |
| Msa0189700 | Msa0336010 | 0.865304 | 6.509385e-65 | -8.615850e-47 |
| Msa0189700 | Msa0339490 | 0.808788 | 2.607356e-50 | -8.615850e-47 |
| Msa0189700 | Msa0339500 | 0.830645 | 2.613718e-55 | -8.615850e-47 |
| Msa0189700 | Msa0341690 | 0.813744 | 2.192073e-51 | -8.615850e-47 |
| Msa0189700 | Msa0348830 | 0.851654 | 7.711452e-61 | -8.615850e-47 |
| Msa0189700 | Msa0348990 | 0.819066 | 1.411566e-52 | -8.615850e-47 |
| Msa0189700 | Msa0357900 | 0.856500 | 3.085081e-62 | -8.615850e-47 |
| Msa0189700 | Msa0366890 | 0.811042 | 8.530420e-51 | -8.615850e-47 |
| Msa0189700 | Msa0369450 | 0.876652 | 1.178130e-68 | -8.615850e-47 |
| Msa0189700 | Msa0380300 | 0.845530 | 3.834330e-59 | -8.615850e-47 |
| Msa0189700 | Msa0387730 | 0.819001 | 1.460507e-52 | -8.615850e-47 |
| Msa0189700 | Msa0393370 | 0.808126 | 3.610461e-50 | -8.615850e-47 |
| Msa0189700 | Msa0395820 | 0.838400 | 2.942117e-57 | -8.615850e-47 |
| Msa0189700 | Msa0418270 | 0.825580 | 4.337587e-54 | -8.615850e-47 |
| Msa0189700 | Msa0423750 | 0.804176 | 2.449550e-49 | -8.615850e-47 |
| Msa0189700 | Msa0427150 | 0.802678 | 5.005054e-49 | -8.615850e-47 |
| Msa0189700 | Msa0443390 | 0.844912 | 5.635230e-59 | -8.615850e-47 |
| Msa0189700 | Msa0449210 | 0.811422 | 7.058882e-51 | -8.615850e-47 |
| Msa0189700 | Msa0462110 | 0.824554 | 7.577978e-54 | -8.615850e-47 |
| Msa0189700 | Msa0468330 | 0.810908 | 9.123439e-51 | -8.615850e-47 |
| Msa0189700 | Msa0482650 | 0.851365 | 9.305707e-61 | -8.615850e-47 |
| Msa0189700 | Msa0486070 | 0.800849 | 1.188024e-48 | -8.615850e-47 |
| Msa0189700 | Msa0497490 | 0.826929 | 2.071254e-54 | -8.615850e-47 |
| Msa0189700 | Msa0518390 | 0.818039 | 2.413567e-52 | -8.615850e-47 |
| Msa0189700 | Msa0518450 | 0.800068 | 1.714434e-48 | -8.615850e-47 |
| Msa0189700 | Msa0521050 | 0.862191 | 6.034726e-64 | -8.615850e-47 |
| Msa0189700 | Msa0524500 | 0.831371 | 1.733543e-55 | -8.615850e-47 |
| Msa0189700 | Msa0526420 | 0.808783 | 2.613830e-50 | -8.615850e-47 |
| Msa0189700 | Msa0526540 | 0.843268 | 1.555353e-58 | -8.615850e-47 |
| Msa0189700 | Msa0527020 | 0.811461 | 6.922390e-51 | -8.615850e-47 |
| Msa0189700 | Msa0527150 | 0.821662 | 3.583085e-53 | -8.615850e-47 |
| Msa0189700 | Msa0531230 | 0.814184 | 1.753604e-51 | -8.615850e-47 |
| Msa0189700 | Msa0531650 | 0.869697 | 2.550448e-66 | -8.615850e-47 |
| Msa0189700 | Msa0534750 | 0.813117 | 3.011026e-51 | -8.615850e-47 |
| Msa0189700 | Msa0556060 | 0.813613 | 2.342545e-51 | -8.615850e-47 |
| Msa0189700 | Msa0571920 | 0.801829 | 7.484053e-49 | -8.615850e-47 |
| Msa0189700 | Msa0576940 | 0.826017 | 3.415954e-54 | -8.615850e-47 |
| Msa0189700 | Msa0578140 | 0.815929 | 7.185536e-52 | -8.615850e-47 |
| Msa0189700 | Msa0581110 | 0.896051 | 5.345395e-76 | -8.615850e-47 |
| Msa0189700 | Msa0581280 | 0.817032 | 4.070192e-52 | -8.615850e-47 |
| Msa0189700 | Msa0584260 | 0.807848 | 4.135723e-50 | -8.615850e-47 |
| Msa0189700 | Msa0588360 | 0.916482 | 1.690051e-85 | -8.615850e-47 |
| Msa0189700 | Msa0603320 | 0.829936 | 3.894822e-55 | -8.615850e-47 |
| Msa0189700 | Msa0606580 | 0.824714 | 6.950371e-54 | -8.615850e-47 |
| Msa0189700 | Msa0608320 | 0.834990 | 2.177367e-56 | -8.615850e-47 |
| Msa0189700 | Msa0615440 | 0.813147 | 2.965395e-51 | -8.615850e-47 |
| Msa0189700 | Msa0615580 | 0.823219 | 1.558403e-53 | -8.615850e-47 |
| Msa0189700 | Msa0621950 | 0.824758 | 6.786058e-54 | -8.615850e-47 |
| Msa0189700 | Msa0626630 | 0.826330 | 2.878791e-54 | -8.615850e-47 |
| Msa0189700 | Msa0644350 | 0.815423 | 9.313545e-52 | -8.615850e-47 |
| Msa0189700 | Msa0647280 | 0.815757 | 7.851313e-52 | -8.615850e-47 |
| Msa0189700 | Msa0661300 | 0.865005 | 8.080598e-65 | -8.615850e-47 |
| Msa0189700 | Msa0664560 | 0.805969 | 1.032470e-49 | -8.615850e-47 |
| Msa0189700 | Msa0664750 | 0.822998 | 1.754284e-53 | -8.615850e-47 |
| Msa0189700 | Msa0666230 | 0.832839 | 7.519370e-56 | -8.615850e-47 |
| Msa0189700 | Msa0669520 | 0.863302 | 2.742344e-64 | -8.615850e-47 |
| Msa0189700 | Msa0686800 | 0.811331 | 7.386243e-51 | -8.615850e-47 |
| Msa0189700 | Msa0689260 | 0.823729 | 1.184096e-53 | -8.615850e-47 |
| Msa0189700 | Msa0698490 | 0.813136 | 2.982426e-51 | -8.615850e-47 |
| Msa0189700 | Msa0698660 | 0.807474 | 4.965591e-50 | -8.615850e-47 |
| Msa0189700 | Msa0698780 | 0.879960 | 8.130626e-70 | -8.615850e-47 |
| Msa0189700 | Msa0725440 | 0.844405 | 7.713988e-59 | -8.615850e-47 |
| Msa0189700 | Msa0729200 | 0.813498 | 2.482551e-51 | -8.615850e-47 |
| Msa0189700 | Msa0738100 | 0.833165 | 6.238153e-56 | -8.615850e-47 |
| Msa0189700 | Msa0769590 | 0.819670 | 1.028286e-52 | -8.615850e-47 |
| Msa0189700 | Msa0784200 | 0.841551 | 4.438282e-58 | -8.615850e-47 |
| Msa0189700 | Msa0785130 | 0.847894 | 8.661581e-60 | -8.615850e-47 |
| Msa0189700 | Msa0790400 | 0.835398 | 1.717722e-56 | -8.615850e-47 |
| Msa0189700 | Msa0792760 | 0.835754 | 1.395643e-56 | -8.615850e-47 |
| Msa0189700 | Msa0806880 | 0.831573 | 1.546400e-55 | -8.615850e-47 |
| Msa0189700 | Msa0808800 | 0.823427 | 1.393582e-53 | -8.615850e-47 |
| Msa0189700 | Msa0817540 | 0.873321 | 1.609422e-67 | -8.615850e-47 |
| Msa0189700 | Msa0818310 | 0.839368 | 1.652655e-57 | -8.615850e-47 |
| Msa0189700 | Msa0830090 | 0.850291 | 1.867389e-60 | -8.615850e-47 |
| Msa0189700 | Msa0835420 | 0.800909 | 1.155274e-48 | -8.615850e-47 |
| Msa0189700 | Msa0858770 | 0.850141 | 2.057052e-60 | -8.615850e-47 |
| Msa0189700 | Msa0867060 | 0.827938 | 1.186447e-54 | -8.615850e-47 |
| Msa0189700 | Msa0881290 | 0.999659 | 0.000000e+00 | -8.615850e-47 |
| Msa0189700 | Msa0888810 | 0.819197 | 1.317647e-52 | -8.615850e-47 |
| Msa0189700 | Msa0902760 | 0.867130 | 1.716743e-65 | -8.615850e-47 |
| Msa0189700 | Msa0953310 | 0.890614 | 8.404561e-74 | -8.615850e-47 |
| Msa0189700 | Msa0958000 | 0.809128 | 2.205074e-50 | -8.615850e-47 |
| Msa0189700 | Msa0968590 | 0.816248 | 6.099376e-52 | -8.615850e-47 |
| Msa0189700 | Msa0989540 | 0.817145 | 3.838990e-52 | -8.615850e-47 |
| Msa0189700 | Msa1006840 | 0.884072 | 2.619743e-71 | -8.615850e-47 |
| Msa0189700 | Msa1012740 | 0.852612 | 4.117885e-61 | -8.615850e-47 |
| Msa0189700 | Msa1013400 | 0.864596 | 1.085227e-64 | -8.615850e-47 |
| Msa0189700 | Msa1019240 | 0.845453 | 4.022577e-59 | -8.615850e-47 |
| Msa0189700 | Msa1019260 | 0.863514 | 2.358068e-64 | -8.615850e-47 |
| Msa0189700 | Msa1021470 | 0.812664 | 3.784362e-51 | -8.615850e-47 |
| Msa0189700 | Msa1029070 | 0.814126 | 1.806015e-51 | -8.615850e-47 |
| Msa0189700 | Msa1043690 | 0.804434 | 2.164267e-49 | -8.615850e-47 |
| Msa0189700 | Msa1051880 | 0.818608 | 1.793699e-52 | -8.615850e-47 |
| Msa0189700 | Msa1060230 | 0.800610 | 1.329238e-48 | -8.615850e-47 |
| Msa0189700 | Msa1072710 | 0.853028 | 3.132725e-61 | -8.615850e-47 |
| Msa0189700 | Msa1077570 | 0.800267 | 1.561873e-48 | -8.615850e-47 |
| Msa0189700 | Msa1078170 | 0.808556 | 2.922182e-50 | -8.615850e-47 |
| Msa0189700 | Msa1078870 | 0.843894 | 1.058059e-58 | -8.615850e-47 |
| Msa0189700 | Msa1078980 | 0.812115 | 4.985600e-51 | -8.615850e-47 |
| Msa0189700 | Msa1081150 | 0.834707 | 2.564571e-56 | -8.615850e-47 |
| Msa0189700 | Msa1081930 | 0.866773 | 2.230513e-65 | -8.615850e-47 |
| Msa0189700 | Msa1085930 | 0.805207 | 1.491989e-49 | -8.615850e-47 |
| Msa0189700 | Msa1088490 | 0.805923 | 1.056030e-49 | -8.615850e-47 |
| Msa0189700 | Msa1093530 | 0.868337 | 7.040179e-66 | -8.615850e-47 |
| Msa0189700 | Msa1093840 | 0.801425 | 9.058475e-49 | -8.615850e-47 |
| Msa0189700 | Msa1101600 | 0.817318 | 3.508707e-52 | -8.615850e-47 |
| Msa0189700 | Msa1104140 | 0.860489 | 1.993788e-63 | -8.615850e-47 |
| Msa0189700 | Msa1104210 | 0.843544 | 1.312778e-58 | -8.615850e-47 |
| Msa0189700 | Msa1105460 | 0.827983 | 1.157012e-54 | -8.615850e-47 |
| Msa0189700 | Msa1120790 | 0.810113 | 1.354603e-50 | -8.615850e-47 |
| Msa0189700 | Msa1124070 | 0.800999 | 1.107327e-48 | -8.615850e-47 |
| Msa0189700 | Msa1126510 | 0.848812 | 4.828651e-60 | -8.615850e-47 |
| Msa0189700 | Msa1126830 | 0.892610 | 1.354563e-74 | -8.615850e-47 |
| Msa0189700 | Msa1127590 | 0.813657 | 2.290800e-51 | -8.615850e-47 |
| Msa0189700 | Msa1128600 | 0.835203 | 1.924210e-56 | -8.615850e-47 |
| Msa0189700 | Msa1135890 | 0.809374 | 1.953309e-50 | -8.615850e-47 |
| Msa0189700 | Msa1148910 | 0.856073 | 4.115921e-62 | -8.615850e-47 |
| Msa0189700 | Msa1156160 | 0.805192 | 1.502899e-49 | -8.615850e-47 |
| Msa0189700 | Msa1165780 | 0.848791 | 4.893661e-60 | -8.615850e-47 |
| Msa0189700 | Msa1165940 | 0.883646 | 3.761008e-71 | -8.615850e-47 |
| Msa0189700 | Msa1166860 | 0.838724 | 2.426731e-57 | -8.615850e-47 |
| Msa0189700 | Msa1169180 | 0.808479 | 3.034678e-50 | -8.615850e-47 |
| Msa0189700 | Msa1174780 | 0.815585 | 8.572443e-52 | -8.615850e-47 |
| Msa0189700 | Msa1207270 | 0.829815 | 4.168393e-55 | -8.615850e-47 |
| Msa0189700 | Msa1208020 | 0.834964 | 2.210702e-56 | -8.615850e-47 |
| Msa0189700 | Msa1209200 | 0.819949 | 8.878209e-53 | -8.615850e-47 |
| Msa0189700 | Msa1213480 | 0.804968 | 1.674024e-49 | -8.615850e-47 |
| Msa0189700 | Msa1215820 | 0.879420 | 1.264659e-69 | -8.615850e-47 |
| Msa0189700 | Msa1217210 | 0.803247 | 3.819187e-49 | -8.615850e-47 |
| Msa0189700 | Msa1218450 | 0.804734 | 1.874148e-49 | -8.615850e-47 |
| Msa0189700 | Msa1218600 | 0.864127 | 1.520094e-64 | -8.615850e-47 |
| Msa0189700 | Msa1225700 | 0.800885 | 1.168349e-48 | -8.615850e-47 |
| Msa0189700 | Msa1229320 | 0.814347 | 1.613476e-51 | -8.615850e-47 |
| Msa0189700 | Msa1230580 | 0.819859 | 9.306363e-53 | -8.615850e-47 |
| Msa0189700 | Msa1251160 | 0.861891 | 7.459745e-64 | -8.615850e-47 |
| Msa0189700 | Msa1257510 | 0.868579 | 5.878323e-66 | -8.615850e-47 |
| Msa0189700 | Msa1262890 | 0.820600 | 6.294726e-53 | -8.615850e-47 |
| Msa0189700 | Msa1264210 | 0.811751 | 5.984183e-51 | -8.615850e-47 |
| Msa0189700 | Msa1265630 | 0.832554 | 8.847741e-56 | -8.615850e-47 |
| Msa0189700 | Msa1266060 | 0.825519 | 4.485885e-54 | -8.615850e-47 |
| Msa0189700 | Msa1273340 | 0.807638 | 4.583718e-50 | -8.615850e-47 |
| Msa0189700 | Msa1299590 | 0.869714 | 2.516905e-66 | -8.615850e-47 |
| Msa0189700 | Msa1300380 | 0.806581 | 7.675591e-50 | -8.615850e-47 |
| Msa0189700 | Msa1305050 | 0.824871 | 6.380958e-54 | -8.615850e-47 |
| Msa0189700 | Msa1332250 | 0.842481 | 2.518845e-58 | -8.615850e-47 |
| Msa0189700 | Msa1332590 | 0.807580 | 4.715294e-50 | -8.615850e-47 |
| Msa0189700 | Msa1338190 | 0.890442 | 9.813318e-74 | -8.615850e-47 |
| Msa0189700 | Msa1343260 | 0.982889 | 2.870372e-156 | -8.615850e-47 |
| Msa0189700 | Msa1358250 | 0.822541 | 2.241383e-53 | -8.615850e-47 |
| Msa0189700 | Msa1362790 | 0.805013 | 1.638142e-49 | -8.615850e-47 |
| Msa0189700 | Msa1363330 | 0.848898 | 4.570082e-60 | -8.615850e-47 |
| Msa0189700 | Msa1366180 | 0.818718 | 1.693891e-52 | -8.615850e-47 |
| Msa0189700 | Msa1366800 | 0.822066 | 2.888996e-53 | -8.615850e-47 |
| Msa0189700 | Msa1367590 | 0.806748 | 7.076518e-50 | -8.615850e-47 |
| Msa0189700 | Msa1369890 | 0.814656 | 1.378797e-51 | -8.615850e-47 |
| Msa0189700 | Msa1374060 | 0.824081 | 9.793822e-54 | -8.615850e-47 |
| Msa0189700 | Msa1374120 | 0.823428 | 1.392638e-53 | -8.615850e-47 |
| Msa0189700 | Msa1376650 | 0.821721 | 3.472513e-53 | -8.615850e-47 |
| Msa0189700 | Msa1379760 | 0.852671 | 3.960804e-61 | -8.615850e-47 |
| Msa0189700 | Msa1381350 | 0.832213 | 1.074892e-55 | -8.615850e-47 |
| Msa0189700 | Msa1382560 | 0.824578 | 7.483481e-54 | -8.615850e-47 |
| Msa0189700 | Msa1382620 | 0.812326 | 4.485616e-51 | -8.615850e-47 |
| Msa0189700 | Msa1386600 | 0.849246 | 3.658436e-60 | -8.615850e-47 |
| Msa0189700 | Msa1394290 | 0.838875 | 2.218076e-57 | -8.615850e-47 |
| Msa0189700 | Msa1399530 | 0.820592 | 6.324141e-53 | -8.615850e-47 |
| Msa0189700 | Msa1410440 | 0.811542 | 6.644605e-51 | -8.615850e-47 |
| Msa0189700 | Msa1411970 | 0.818551 | 1.847583e-52 | -8.615850e-47 |
| Msa0189700 | Msa1413260 | 0.815445 | 9.209209e-52 | -8.615850e-47 |
| Msa0189700 | Msa1413500 | 0.824401 | 8.232819e-54 | -8.615850e-47 |
| Msa0189700 | Msa1419870 | 0.806149 | 9.463101e-50 | -8.615850e-47 |
| Msa0189700 | Msa1421560 | 0.801539 | 8.586700e-49 | -8.615850e-47 |
| Msa0189700 | Msa1425670 | 0.802841 | 4.633079e-49 | -8.615850e-47 |
| Msa0189700 | Msa1426120 | 0.848150 | 7.363142e-60 | -8.615850e-47 |
| Msa0189700 | Msa1426370 | 0.803909 | 2.783643e-49 | -8.615850e-47 |
| Msa0189700 | Msa1426490 | 0.814746 | 1.316483e-51 | -8.615850e-47 |
| Msa0189700 | Msa1427560 | 0.810260 | 1.259056e-50 | -8.615850e-47 |
| Msa0189700 | Msa1432700 | 0.841860 | 3.678337e-58 | -8.615850e-47 |
| Msa0189700 | Msa1433310 | 0.830126 | 3.500673e-55 | -8.615850e-47 |
| Msa0189700 | Msa1434090 | 0.801250 | 9.837870e-49 | -8.615850e-47 |
| Msa0189700 | Msa1440880 | 0.832629 | 8.476005e-56 | -8.615850e-47 |
| Msa0189700 | Msa1443300 | 0.847649 | 1.012114e-59 | -8.615850e-47 |
| Msa0189700 | Msa1446810 | 0.828459 | 8.886205e-55 | -8.615850e-47 |
| Msa0189700 | Msa1446820 | 0.804676 | 1.926961e-49 | -8.615850e-47 |
| Msa0189700 | Msa1448690 | 0.822858 | 1.891652e-53 | -8.615850e-47 |
| Msa0189700 | Msa1450280 | 0.819371 | 1.203198e-52 | -8.615850e-47 |
| Msa0189700 | Msa1451160 | 0.827185 | 1.799264e-54 | -8.615850e-47 |
| Msa0189700 | Msa1456050 | 0.836050 | 1.174158e-56 | -8.615850e-47 |
| Msa0189700 | Msa1457920 | 0.829444 | 5.129899e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189700 | MtrunA17_Chr7g0263251 | 100.000 | 105 | 0 | 0 | 1 | 105 | 1 | 105 | 1.24e-71 | 208 |
| Msa0189700 | MtrunA17_Chr4g0050721 | 100.000 | 105 | 0 | 0 | 1 | 105 | 1 | 105 | 1.24e-71 | 208 |
| Msa0189700 | MtrunA17_Chr2g0278691 | 100.000 | 105 | 0 | 0 | 1 | 105 | 1 | 105 | 1.24e-71 | 208 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189700 | AT3G23390.1 | 92.381 | 105 | 8 | 0 | 1 | 105 | 1 | 105 | 1.05e-66 | 196 |
| Msa0189700 | AT4G14320.1 | 92.381 | 105 | 8 | 0 | 1 | 105 | 1 | 105 | 1.05e-66 | 196 |
| Msa0189700 | AT4G14320.2 | 91.398 | 93 | 8 | 0 | 1 | 93 | 1 | 93 | 3.44e-57 | 174 |
Find 58 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAACTAGTGTGGAATTT+AGG | 0.185779 | 2_1:-5150262 | Msa0189700:three_prime_UTR |
| TCTCTTCTAGGTGGAGAATT+AGG | 0.245518 | 2_1:-5150573 | Msa0189700:exon |
| ATCTTTACCCTTCTTGTATT+GGG | 0.247979 | 2_1:+5151452 | None:intergenic |
| CCATTGTTGTTGAAATGTTT+TGG | 0.281419 | 2_1:-5150525 | Msa0189700:three_prime_UTR |
| TATCTTTACCCTTCTTGTAT+TGG | 0.312780 | 2_1:+5151451 | None:intergenic |
| CACATATGTTTGTAGGGAAA+TGG | 0.350911 | 2_1:-5150161 | Msa0189700:three_prime_UTR |
| TTGGGGAAATCAAGGTGATT+GGG | 0.367665 | 2_1:-5150125 | Msa0189700:three_prime_UTR |
| AAATGGTTTGTGTGTATTGT+TGG | 0.370801 | 2_1:-5150144 | Msa0189700:three_prime_UTR |
| CAAGGGAACTTCTCTCTTCT+AGG | 0.380957 | 2_1:-5150585 | Msa0189700:exon |
| TGTTGAACACATATGTTTGT+AGG | 0.381230 | 2_1:-5150168 | Msa0189700:three_prime_UTR |
| GATCGCAAACAGTCTGGTTA+TGG | 0.387570 | 2_1:-5151399 | Msa0189700:CDS |
| AATGGTTTGTGTGTATTGTT+GGG | 0.389029 | 2_1:-5150143 | Msa0189700:three_prime_UTR |
| AAAATCATCAAAGGAATTCA+AGG | 0.412835 | 2_1:+5150413 | None:intergenic |
| TGTTCTGAGGTTGCAATGCC+AGG | 0.414173 | 2_1:-5150796 | Msa0189700:CDS |
| CATGGTGACGGCGCGTGGAT+TGG | 0.425073 | 2_1:+5151628 | None:intergenic |
| GTTGGGGAAATCAAGGTGAT+TGG | 0.436724 | 2_1:-5150126 | Msa0189700:three_prime_UTR |
| GCATTCCTTGCTCTTGCAGT+AGG | 0.441918 | 2_1:+5151500 | None:intergenic |
| TTTAAGTTTCTGTGTTAATG+TGG | 0.446453 | 2_1:-5150239 | Msa0189700:three_prime_UTR |
| TGAGATTGGTGGTGATAAGA+AGG | 0.451732 | 2_1:-5150609 | Msa0189700:CDS |
| GGGAAAGTCGGTGATTGAAT+TGG | 0.463252 | 2_1:-5150217 | Msa0189700:three_prime_UTR |
| CGTTACGATCGCAAACAGTC+TGG | 0.464861 | 2_1:-5151405 | Msa0189700:CDS |
| TTAAGTTTCTGTGTTAATGT+GGG | 0.465340 | 2_1:-5150238 | Msa0189700:three_prime_UTR |
| TGTTTCTCAACATGCAATCA+AGG | 0.468902 | 2_1:-5150763 | Msa0189700:intron |
| GTTGAACACATATGTTTGTA+GGG | 0.469153 | 2_1:-5150167 | Msa0189700:three_prime_UTR |
| TGGGGAAATCAAGGTGATTG+GGG | 0.489090 | 2_1:-5150124 | Msa0189700:three_prime_UTR |
| TCATTTCCTCTAGTTTGTGT+TGG | 0.490345 | 2_1:-5150325 | Msa0189700:three_prime_UTR |
| GTTACCTTCTTGTGAAAGAC+GGG | 0.495280 | 2_1:+5151363 | None:intergenic |
| GAGAAACATGCTTGCAACCC+TGG | 0.514679 | 2_1:+5150778 | None:intergenic |
| GAGATTGGTGGTGATAAGAA+GGG | 0.526133 | 2_1:-5150608 | Msa0189700:CDS |
| GTGTATTGTTGGGGAAATCA+AGG | 0.538232 | 2_1:-5150133 | Msa0189700:three_prime_UTR |
| CAAGGTTACCCAATACAAGA+AGG | 0.553515 | 2_1:-5151460 | Msa0189700:CDS |
| CGCAAACAGTCTGGTTATGG+TGG | 0.554816 | 2_1:-5151396 | Msa0189700:CDS |
| TGGTGGTGATAAGAAGGGCA+AGG | 0.556388 | 2_1:-5150603 | Msa0189700:CDS |
| CCAAAACATTTCAACAACAA+TGG | 0.558543 | 2_1:+5150525 | None:intergenic |
| TAAGTTTCTGTGTTAATGTG+GGG | 0.560887 | 2_1:-5150237 | Msa0189700:three_prime_UTR |
| TTTCAATTTACCGAACATTG+TGG | 0.561609 | 2_1:+5150279 | None:intergenic |
| GTTACCGTCTCCACAATGTT+CGG | 0.561933 | 2_1:-5150289 | Msa0189700:three_prime_UTR |
| ATTACCATGGTGACGGCGCG+TGG | 0.569167 | 2_1:+5151623 | None:intergenic |
| AAAGATAGCATCGCCGCTCA+AGG | 0.571046 | 2_1:-5151435 | Msa0189700:CDS |
| AGTTACCTTCTTGTGAAAGA+CGG | 0.572609 | 2_1:+5151362 | None:intergenic |
| CAAGAAGCATACACTTCACA+AGG | 0.596444 | 2_1:-5151478 | Msa0189700:CDS |
| TGTGTTAATGTGGGGAAAGT+CGG | 0.596962 | 2_1:-5150229 | Msa0189700:three_prime_UTR |
| AAAATGGAGCGATGAAGCAA+TGG | 0.600572 | 2_1:+5151681 | None:intergenic |
| TTTACCGAACATTGTGGAGA+CGG | 0.600929 | 2_1:+5150285 | None:intergenic |
| GAAAACCTACTGCAAGAGCA+AGG | 0.601503 | 2_1:-5151505 | Msa0189700:CDS |
| CAATCCACGCGCCGTCACCA+TGG | 0.602128 | 2_1:-5151627 | Msa0189700:intron |
| CCACTAAGAAAATTGTTCTG+AGG | 0.602363 | 2_1:-5150809 | Msa0189700:CDS |
| TAAGCCCGTCTTTCACAAGA+AGG | 0.606865 | 2_1:-5151367 | Msa0189700:intron |
| ATGGTTTGTGTGTATTGTTG+GGG | 0.618518 | 2_1:-5150142 | Msa0189700:three_prime_UTR |
| TCGGTAAATTGAAACTAGTG+TGG | 0.628118 | 2_1:-5150270 | Msa0189700:three_prime_UTR |
| AAGGTTACCCAATACAAGAA+GGG | 0.630634 | 2_1:-5151459 | Msa0189700:CDS |
| GGTGGTGATAAGAAGGGCAA+GGG | 0.630826 | 2_1:-5150602 | Msa0189700:CDS |
| GTAACGACGCTTACCTTGAG+CGG | 0.638526 | 2_1:+5151422 | None:intergenic |
| GTTCTGAGGTTGCAATGCCA+GGG | 0.641034 | 2_1:-5150795 | Msa0189700:CDS |
| GGAGATGATTACCATGGTGA+CGG | 0.643982 | 2_1:+5151616 | None:intergenic |
| GGGAACTTCTCTCTTCTAGG+TGG | 0.678633 | 2_1:-5150582 | Msa0189700:exon |
| TTAACACCAACACAAACTAG+AGG | 0.679173 | 2_1:+5150319 | None:intergenic |
| GCGCGTGGATTGGATCTGAG+AGG | 0.710537 | 2_1:+5151638 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAATCTTTTATCATT+TGG | - | chr2_1:5151430-5151449 | Msa0189700:CDS | 10.0% |
| !!! | TTAAAAATCTTTTATCATTT+GGG | - | chr2_1:5151431-5151450 | Msa0189700:CDS | 10.0% |
| !!! | TTTAAAAATCTTTTATCATT+TGG | - | chr2_1:5151430-5151449 | Msa0189700:CDS | 10.0% |
| !!! | TTAAAAATCTTTTATCATTT+GGG | - | chr2_1:5151431-5151450 | Msa0189700:CDS | 10.0% |
| !!! | TGATTTTTTTTTTAGTTGAA+TGG | - | chr2_1:5150941-5150960 | Msa0189700:intron | 15.0% |
| !!! | ATTTAATTTTTGTTTGTGTT+TGG | - | chr2_1:5150971-5150990 | Msa0189700:intron | 15.0% |
| !!! | AAGATTTTTAAAATCATCAA+AGG | + | chr2_1:5151422-5151441 | None:intergenic | 15.0% |
| !!! | ATCTAATTTTATCATAACAA+TGG | + | chr2_1:5151472-5151491 | None:intergenic | 15.0% |
| !!! | TGATTTTTTTTTTAGTTGAA+TGG | - | chr2_1:5150941-5150960 | Msa0189700:intron | 15.0% |
| !!! | ATTTAATTTTTGTTTGTGTT+TGG | - | chr2_1:5150971-5150990 | Msa0189700:intron | 15.0% |
| !!! | AAGATTTTTAAAATCATCAA+AGG | + | chr2_1:5151422-5151441 | None:intergenic | 15.0% |
| !!! | ATCTAATTTTATCATAACAA+TGG | + | chr2_1:5151472-5151491 | None:intergenic | 15.0% |
| !! | AAATGTATAAAAGTAATGAG+GGG | + | chr2_1:5150498-5150517 | None:intergenic | 20.0% |
| !! | GAAATGTATAAAAGTAATGA+GGG | + | chr2_1:5150499-5150518 | None:intergenic | 20.0% |
| !! | TGAAATGTATAAAAGTAATG+AGG | + | chr2_1:5150500-5150519 | None:intergenic | 20.0% |
| !! | CTTACAATCAACTAAAAAAA+TGG | + | chr2_1:5150542-5150561 | None:intergenic | 20.0% |
| !! | GAATGCAAAAAATTCAAATT+TGG | - | chr2_1:5150865-5150884 | Msa0189700:intron | 20.0% |
| !!! | CAGAAATTTTATTTTGTAGA+TGG | - | chr2_1:5151123-5151142 | Msa0189700:intron | 20.0% |
| !!! | TTTTATTTTGTAGATGGATA+TGG | - | chr2_1:5151129-5151148 | Msa0189700:intron | 20.0% |
| !! | AAATGTATAAAAGTAATGAG+GGG | + | chr2_1:5150498-5150517 | None:intergenic | 20.0% |
| !! | GAAATGTATAAAAGTAATGA+GGG | + | chr2_1:5150499-5150518 | None:intergenic | 20.0% |
| !! | TGAAATGTATAAAAGTAATG+AGG | + | chr2_1:5150500-5150519 | None:intergenic | 20.0% |
| !! | CTTACAATCAACTAAAAAAA+TGG | + | chr2_1:5150542-5150561 | None:intergenic | 20.0% |
| !! | GAATGCAAAAAATTCAAATT+TGG | - | chr2_1:5150865-5150884 | Msa0189700:intron | 20.0% |
| !!! | CAGAAATTTTATTTTGTAGA+TGG | - | chr2_1:5151123-5151142 | Msa0189700:intron | 20.0% |
| !!! | TTTTATTTTGTAGATGGATA+TGG | - | chr2_1:5151129-5151148 | Msa0189700:intron | 20.0% |
| ! | TGATATAATTACGATTACGT+AGG | + | chr2_1:5150245-5150264 | None:intergenic | 25.0% |
| ! | GAAAATCCAACATCAAAAAA+GGG | + | chr2_1:5150276-5150295 | None:intergenic | 25.0% |
| ! | TGAAAATCCAACATCAAAAA+AGG | + | chr2_1:5150277-5150296 | None:intergenic | 25.0% |
| !!! | TTTTTTGATGTTGGATTTTC+AGG | - | chr2_1:5150276-5150295 | Msa0189700:three_prime_UTR | 25.0% |
| ! | AATGTATAAAAGTAATGAGG+GGG | + | chr2_1:5150497-5150516 | None:intergenic | 25.0% |
| !!! | TTAGCTTTATGCAAATGATT+AGG | - | chr2_1:5150622-5150641 | Msa0189700:CDS | 25.0% |
| !!! | TAGCTTTATGCAAATGATTA+GGG | - | chr2_1:5150623-5150642 | Msa0189700:CDS | 25.0% |
| ! | TGGATTCAAATATGGTTAAT+AGG | - | chr2_1:5150666-5150685 | Msa0189700:intron | 25.0% |
| !!! | TGTGTTTGGTTTTATTGTAT+AGG | - | chr2_1:5150985-5151004 | Msa0189700:intron | 25.0% |
| ! | ATATGGTTGTTTGTATCTAA+TGG | - | chr2_1:5151146-5151165 | Msa0189700:intron | 25.0% |
| ! | AAAATCATCAAAGGAATTCA+AGG | + | chr2_1:5151413-5151432 | None:intergenic | 25.0% |
| !! | TTTAAGTTTCTGTGTTAATG+TGG | - | chr2_1:5151584-5151603 | Msa0189700:intron | 25.0% |
| ! | TTAAGTTTCTGTGTTAATGT+GGG | - | chr2_1:5151585-5151604 | Msa0189700:intron | 25.0% |
| ! | TGATATAATTACGATTACGT+AGG | + | chr2_1:5150245-5150264 | None:intergenic | 25.0% |
| ! | GAAAATCCAACATCAAAAAA+GGG | + | chr2_1:5150276-5150295 | None:intergenic | 25.0% |
| ! | TGAAAATCCAACATCAAAAA+AGG | + | chr2_1:5150277-5150296 | None:intergenic | 25.0% |
| !!! | TTTTTTGATGTTGGATTTTC+AGG | - | chr2_1:5150276-5150295 | Msa0189700:three_prime_UTR | 25.0% |
| ! | AATGTATAAAAGTAATGAGG+GGG | + | chr2_1:5150497-5150516 | None:intergenic | 25.0% |
| !!! | TTAGCTTTATGCAAATGATT+AGG | - | chr2_1:5150622-5150641 | Msa0189700:CDS | 25.0% |
| !!! | TAGCTTTATGCAAATGATTA+GGG | - | chr2_1:5150623-5150642 | Msa0189700:CDS | 25.0% |
| ! | TGGATTCAAATATGGTTAAT+AGG | - | chr2_1:5150666-5150685 | Msa0189700:intron | 25.0% |
| !!! | TGTGTTTGGTTTTATTGTAT+AGG | - | chr2_1:5150985-5151004 | Msa0189700:intron | 25.0% |
| ! | ATATGGTTGTTTGTATCTAA+TGG | - | chr2_1:5151146-5151165 | Msa0189700:intron | 25.0% |
| ! | AAAATCATCAAAGGAATTCA+AGG | + | chr2_1:5151413-5151432 | None:intergenic | 25.0% |
| !! | TTTAAGTTTCTGTGTTAATG+TGG | - | chr2_1:5151584-5151603 | Msa0189700:intron | 25.0% |
| ! | TTAAGTTTCTGTGTTAATGT+GGG | - | chr2_1:5151585-5151604 | Msa0189700:intron | 25.0% |
| !! | AAGCAATGGTTTGTGTTTTA+TGG | + | chr2_1:5150131-5150150 | None:intergenic | 30.0% |
| ATCTTTACCCTTCTTGTATT+GGG | + | chr2_1:5150374-5150393 | None:intergenic | 30.0% | |
| TATCTTTACCCTTCTTGTAT+TGG | + | chr2_1:5150375-5150394 | None:intergenic | 30.0% | |
| GGTTAATAGGAAGAACATTA+TGG | - | chr2_1:5150679-5150698 | Msa0189700:intron | 30.0% | |
| ! | TTTTGAGCTGAATGTGAAAT+TGG | - | chr2_1:5150778-5150797 | Msa0189700:CDS | 30.0% |
| CCAAAACATTTCAACAACAA+TGG | + | chr2_1:5151301-5151320 | None:intergenic | 30.0% | |
| !! | CCATTGTTGTTGAAATGTTT+TGG | - | chr2_1:5151298-5151317 | Msa0189700:intron | 30.0% |
| !!! | TGAAATGTTTTGGTTCTCTA+TGG | - | chr2_1:5151308-5151327 | Msa0189700:intron | 30.0% |
| TTTCAATTTACCGAACATTG+TGG | + | chr2_1:5151547-5151566 | None:intergenic | 30.0% | |
| TTGAAACTAGTGTGGAATTT+AGG | - | chr2_1:5151561-5151580 | Msa0189700:intron | 30.0% | |
| TAAGTTTCTGTGTTAATGTG+GGG | - | chr2_1:5151586-5151605 | Msa0189700:intron | 30.0% | |
| TGTTGAACACATATGTTTGT+AGG | - | chr2_1:5151655-5151674 | Msa0189700:five_prime_UTR | 30.0% | |
| GTTGAACACATATGTTTGTA+GGG | - | chr2_1:5151656-5151675 | Msa0189700:five_prime_UTR | 30.0% | |
| ! | AAATGGTTTGTGTGTATTGT+TGG | - | chr2_1:5151679-5151698 | Msa0189700:five_prime_UTR | 30.0% |
| ! | AATGGTTTGTGTGTATTGTT+GGG | - | chr2_1:5151680-5151699 | Msa0189700:five_prime_UTR | 30.0% |
| !! | AAGCAATGGTTTGTGTTTTA+TGG | + | chr2_1:5150131-5150150 | None:intergenic | 30.0% |
| ATCTTTACCCTTCTTGTATT+GGG | + | chr2_1:5150374-5150393 | None:intergenic | 30.0% | |
| TATCTTTACCCTTCTTGTAT+TGG | + | chr2_1:5150375-5150394 | None:intergenic | 30.0% | |
| GGTTAATAGGAAGAACATTA+TGG | - | chr2_1:5150679-5150698 | Msa0189700:intron | 30.0% | |
| ! | TTTTGAGCTGAATGTGAAAT+TGG | - | chr2_1:5150778-5150797 | Msa0189700:CDS | 30.0% |
| CCAAAACATTTCAACAACAA+TGG | + | chr2_1:5151301-5151320 | None:intergenic | 30.0% | |
| !! | CCATTGTTGTTGAAATGTTT+TGG | - | chr2_1:5151298-5151317 | Msa0189700:intron | 30.0% |
| !!! | TGAAATGTTTTGGTTCTCTA+TGG | - | chr2_1:5151308-5151327 | Msa0189700:intron | 30.0% |
| TTTCAATTTACCGAACATTG+TGG | + | chr2_1:5151547-5151566 | None:intergenic | 30.0% | |
| TTGAAACTAGTGTGGAATTT+AGG | - | chr2_1:5151561-5151580 | Msa0189700:intron | 30.0% | |
| TAAGTTTCTGTGTTAATGTG+GGG | - | chr2_1:5151586-5151605 | Msa0189700:intron | 30.0% | |
| TGTTGAACACATATGTTTGT+AGG | - | chr2_1:5151655-5151674 | Msa0189700:five_prime_UTR | 30.0% | |
| GTTGAACACATATGTTTGTA+GGG | - | chr2_1:5151656-5151675 | Msa0189700:five_prime_UTR | 30.0% | |
| ! | AAATGGTTTGTGTGTATTGT+TGG | - | chr2_1:5151679-5151698 | Msa0189700:five_prime_UTR | 30.0% |
| ! | AATGGTTTGTGTGTATTGTT+GGG | - | chr2_1:5151680-5151699 | Msa0189700:five_prime_UTR | 30.0% |
| !!! | GCTAAACCCTTTTTTGATGT+TGG | - | chr2_1:5150267-5150286 | Msa0189700:three_prime_UTR | 35.0% |
| ! | CAGTAGGTTTTCTTTGTCTT+TGG | + | chr2_1:5150310-5150329 | None:intergenic | 35.0% |
| AAGGTTACCCAATACAAGAA+GGG | - | chr2_1:5150364-5150383 | Msa0189700:three_prime_UTR | 35.0% | |
| AGTTACCTTCTTGTGAAAGA+CGG | + | chr2_1:5150464-5150483 | None:intergenic | 35.0% | |
| AGGGAAGATTTAGAGATTGA+TGG | - | chr2_1:5150642-5150661 | Msa0189700:intron | 35.0% | |
| ! | AAGATTTAGAGATTGATGGC+TGG | - | chr2_1:5150646-5150665 | Msa0189700:intron | 35.0% |
| ! | TTGATGGCTGGATTCAAATA+TGG | - | chr2_1:5150658-5150677 | Msa0189700:intron | 35.0% |
| ! | CTTATATCACTAAGTGGGTT+TGG | + | chr2_1:5150724-5150743 | None:intergenic | 35.0% |
| CAAACCCACTTAGTGATATA+AGG | - | chr2_1:5150722-5150741 | Msa0189700:intron | 35.0% | |
| ! | CAAGCCTTATATCACTAAGT+GGG | + | chr2_1:5150729-5150748 | None:intergenic | 35.0% |
| ! | CCTCAGAACAATTTTCTTAG+TGG | + | chr2_1:5151017-5151036 | None:intergenic | 35.0% |
| CCACTAAGAAAATTGTTCTG+AGG | - | chr2_1:5151014-5151033 | Msa0189700:intron | 35.0% | |
| TGTTTCTCAACATGCAATCA+AGG | - | chr2_1:5151060-5151079 | Msa0189700:intron | 35.0% | |
| ! | TCATTTCCTCTAGTTTGTGT+TGG | - | chr2_1:5151498-5151517 | Msa0189700:CDS | 35.0% |
| TTAACACCAACACAAACTAG+AGG | + | chr2_1:5151507-5151526 | None:intergenic | 35.0% | |
| TCGGTAAATTGAAACTAGTG+TGG | - | chr2_1:5151553-5151572 | Msa0189700:intron | 35.0% | |
| CACATATGTTTGTAGGGAAA+TGG | - | chr2_1:5151662-5151681 | Msa0189700:five_prime_UTR | 35.0% | |
| ! | ATGGTTTGTGTGTATTGTTG+GGG | - | chr2_1:5151681-5151700 | Msa0189700:five_prime_UTR | 35.0% |
| !!! | GCTAAACCCTTTTTTGATGT+TGG | - | chr2_1:5150267-5150286 | Msa0189700:three_prime_UTR | 35.0% |
| ! | CAGTAGGTTTTCTTTGTCTT+TGG | + | chr2_1:5150310-5150329 | None:intergenic | 35.0% |
| AAGGTTACCCAATACAAGAA+GGG | - | chr2_1:5150364-5150383 | Msa0189700:three_prime_UTR | 35.0% | |
| AGTTACCTTCTTGTGAAAGA+CGG | + | chr2_1:5150464-5150483 | None:intergenic | 35.0% | |
| AGGGAAGATTTAGAGATTGA+TGG | - | chr2_1:5150642-5150661 | Msa0189700:intron | 35.0% | |
| ! | AAGATTTAGAGATTGATGGC+TGG | - | chr2_1:5150646-5150665 | Msa0189700:intron | 35.0% |
| ! | TTGATGGCTGGATTCAAATA+TGG | - | chr2_1:5150658-5150677 | Msa0189700:intron | 35.0% |
| ! | CTTATATCACTAAGTGGGTT+TGG | + | chr2_1:5150724-5150743 | None:intergenic | 35.0% |
| CAAACCCACTTAGTGATATA+AGG | - | chr2_1:5150722-5150741 | Msa0189700:intron | 35.0% | |
| ! | CAAGCCTTATATCACTAAGT+GGG | + | chr2_1:5150729-5150748 | None:intergenic | 35.0% |
| ! | CCTCAGAACAATTTTCTTAG+TGG | + | chr2_1:5151017-5151036 | None:intergenic | 35.0% |
| CCACTAAGAAAATTGTTCTG+AGG | - | chr2_1:5151014-5151033 | Msa0189700:intron | 35.0% | |
| TGTTTCTCAACATGCAATCA+AGG | - | chr2_1:5151060-5151079 | Msa0189700:intron | 35.0% | |
| ! | TCATTTCCTCTAGTTTGTGT+TGG | - | chr2_1:5151498-5151517 | Msa0189700:CDS | 35.0% |
| TTAACACCAACACAAACTAG+AGG | + | chr2_1:5151507-5151526 | None:intergenic | 35.0% | |
| TCGGTAAATTGAAACTAGTG+TGG | - | chr2_1:5151553-5151572 | Msa0189700:intron | 35.0% | |
| CACATATGTTTGTAGGGAAA+TGG | - | chr2_1:5151662-5151681 | Msa0189700:five_prime_UTR | 35.0% | |
| ! | ATGGTTTGTGTGTATTGTTG+GGG | - | chr2_1:5151681-5151700 | Msa0189700:five_prime_UTR | 35.0% |
| AAAATGGAGCGATGAAGCAA+TGG | + | chr2_1:5150145-5150164 | None:intergenic | 40.0% | |
| !! | AGTTTTGTGCGCAGTGAAAA+TGG | + | chr2_1:5150161-5150180 | None:intergenic | 40.0% |
| ! | CAAGAAGCATACACTTCACA+AGG | - | chr2_1:5150345-5150364 | Msa0189700:three_prime_UTR | 40.0% |
| CAAGGTTACCCAATACAAGA+AGG | - | chr2_1:5150363-5150382 | Msa0189700:three_prime_UTR | 40.0% | |
| GTTACCTTCTTGTGAAAGAC+GGG | + | chr2_1:5150463-5150482 | None:intergenic | 40.0% | |
| ! | CCAAGCCTTATATCACTAAG+TGG | + | chr2_1:5150730-5150749 | None:intergenic | 40.0% |
| CCACTTAGTGATATAAGGCT+TGG | - | chr2_1:5150727-5150746 | Msa0189700:intron | 40.0% | |
| ! | GTTGTGTTTCTGTTATGCAG+AGG | - | chr2_1:5151180-5151199 | Msa0189700:intron | 40.0% |
| !!! | AGGTGCAAGCATTTTGAGAT+TGG | - | chr2_1:5151200-5151219 | Msa0189700:intron | 40.0% |
| !!! | TGCAAGCATTTTGAGATTGG+TGG | - | chr2_1:5151203-5151222 | Msa0189700:intron | 40.0% |
| !! | TGAGATTGGTGGTGATAAGA+AGG | - | chr2_1:5151214-5151233 | Msa0189700:intron | 40.0% |
| !! | GAGATTGGTGGTGATAAGAA+GGG | - | chr2_1:5151215-5151234 | Msa0189700:intron | 40.0% |
| TCTCTTCTAGGTGGAGAATT+AGG | - | chr2_1:5151250-5151269 | Msa0189700:intron | 40.0% | |
| TTTACCGAACATTGTGGAGA+CGG | + | chr2_1:5151541-5151560 | None:intergenic | 40.0% | |
| TGTGTTAATGTGGGGAAAGT+CGG | - | chr2_1:5151594-5151613 | Msa0189700:intron | 40.0% | |
| GTGTATTGTTGGGGAAATCA+AGG | - | chr2_1:5151690-5151709 | Msa0189700:five_prime_UTR | 40.0% | |
| TTGGGGAAATCAAGGTGATT+GGG | - | chr2_1:5151698-5151717 | Msa0189700:five_prime_UTR | 40.0% | |
| AAAATGGAGCGATGAAGCAA+TGG | + | chr2_1:5150145-5150164 | None:intergenic | 40.0% | |
| !! | AGTTTTGTGCGCAGTGAAAA+TGG | + | chr2_1:5150161-5150180 | None:intergenic | 40.0% |
| ! | CAAGAAGCATACACTTCACA+AGG | - | chr2_1:5150345-5150364 | Msa0189700:three_prime_UTR | 40.0% |
| CAAGGTTACCCAATACAAGA+AGG | - | chr2_1:5150363-5150382 | Msa0189700:three_prime_UTR | 40.0% | |
| GTTACCTTCTTGTGAAAGAC+GGG | + | chr2_1:5150463-5150482 | None:intergenic | 40.0% | |
| ! | CCAAGCCTTATATCACTAAG+TGG | + | chr2_1:5150730-5150749 | None:intergenic | 40.0% |
| CCACTTAGTGATATAAGGCT+TGG | - | chr2_1:5150727-5150746 | Msa0189700:intron | 40.0% | |
| ! | GTTGTGTTTCTGTTATGCAG+AGG | - | chr2_1:5151180-5151199 | Msa0189700:intron | 40.0% |
| !!! | AGGTGCAAGCATTTTGAGAT+TGG | - | chr2_1:5151200-5151219 | Msa0189700:intron | 40.0% |
| !!! | TGCAAGCATTTTGAGATTGG+TGG | - | chr2_1:5151203-5151222 | Msa0189700:intron | 40.0% |
| !! | TGAGATTGGTGGTGATAAGA+AGG | - | chr2_1:5151214-5151233 | Msa0189700:intron | 40.0% |
| !! | GAGATTGGTGGTGATAAGAA+GGG | - | chr2_1:5151215-5151234 | Msa0189700:intron | 40.0% |
| TCTCTTCTAGGTGGAGAATT+AGG | - | chr2_1:5151250-5151269 | Msa0189700:intron | 40.0% | |
| TTTACCGAACATTGTGGAGA+CGG | + | chr2_1:5151541-5151560 | None:intergenic | 40.0% | |
| TGTGTTAATGTGGGGAAAGT+CGG | - | chr2_1:5151594-5151613 | Msa0189700:intron | 40.0% | |
| GTGTATTGTTGGGGAAATCA+AGG | - | chr2_1:5151690-5151709 | Msa0189700:five_prime_UTR | 40.0% | |
| TTGGGGAAATCAAGGTGATT+GGG | - | chr2_1:5151698-5151717 | Msa0189700:five_prime_UTR | 40.0% | |
| GGAGATGATTACCATGGTGA+CGG | + | chr2_1:5150210-5150229 | None:intergenic | 45.0% | |
| CGATTACGTAGGAACAGACA+CGG | + | chr2_1:5150234-5150253 | None:intergenic | 45.0% | |
| GAAAACCTACTGCAAGAGCA+AGG | - | chr2_1:5150318-5150337 | Msa0189700:three_prime_UTR | 45.0% | |
| GATCGCAAACAGTCTGGTTA+TGG | - | chr2_1:5150424-5150443 | Msa0189700:three_prime_UTR | 45.0% | |
| TAAGCCCGTCTTTCACAAGA+AGG | - | chr2_1:5150456-5150475 | Msa0189700:three_prime_UTR | 45.0% | |
| AAGTAATGAGGGGGTGAAGT+GGG | + | chr2_1:5150488-5150507 | None:intergenic | 45.0% | |
| AAAGTAATGAGGGGGTGAAG+TGG | + | chr2_1:5150489-5150508 | None:intergenic | 45.0% | |
| CAAGGGAACTTCTCTCTTCT+AGG | - | chr2_1:5151238-5151257 | Msa0189700:intron | 45.0% | |
| GTTACCGTCTCCACAATGTT+CGG | - | chr2_1:5151534-5151553 | Msa0189700:intron | 45.0% | |
| GGGAAAGTCGGTGATTGAAT+TGG | - | chr2_1:5151606-5151625 | Msa0189700:intron | 45.0% | |
| GTTGGGGAAATCAAGGTGAT+TGG | - | chr2_1:5151697-5151716 | Msa0189700:five_prime_UTR | 45.0% | |
| TGGGGAAATCAAGGTGATTG+GGG | - | chr2_1:5151699-5151718 | Msa0189700:five_prime_UTR | 45.0% | |
| GGAGATGATTACCATGGTGA+CGG | + | chr2_1:5150210-5150229 | None:intergenic | 45.0% | |
| CGATTACGTAGGAACAGACA+CGG | + | chr2_1:5150234-5150253 | None:intergenic | 45.0% | |
| GAAAACCTACTGCAAGAGCA+AGG | - | chr2_1:5150318-5150337 | Msa0189700:three_prime_UTR | 45.0% | |
| GATCGCAAACAGTCTGGTTA+TGG | - | chr2_1:5150424-5150443 | Msa0189700:three_prime_UTR | 45.0% | |
| TAAGCCCGTCTTTCACAAGA+AGG | - | chr2_1:5150456-5150475 | Msa0189700:three_prime_UTR | 45.0% | |
| AAGTAATGAGGGGGTGAAGT+GGG | + | chr2_1:5150488-5150507 | None:intergenic | 45.0% | |
| AAAGTAATGAGGGGGTGAAG+TGG | + | chr2_1:5150489-5150508 | None:intergenic | 45.0% | |
| CAAGGGAACTTCTCTCTTCT+AGG | - | chr2_1:5151238-5151257 | Msa0189700:intron | 45.0% | |
| GTTACCGTCTCCACAATGTT+CGG | - | chr2_1:5151534-5151553 | Msa0189700:intron | 45.0% | |
| GGGAAAGTCGGTGATTGAAT+TGG | - | chr2_1:5151606-5151625 | Msa0189700:intron | 45.0% | |
| GTTGGGGAAATCAAGGTGAT+TGG | - | chr2_1:5151697-5151716 | Msa0189700:five_prime_UTR | 45.0% | |
| CACGGTGGAGATGATTACCA+TGG | + | chr2_1:5150216-5150235 | None:intergenic | 50.0% | |
| TTACGTAGGAACAGACACGG+TGG | + | chr2_1:5150231-5150250 | None:intergenic | 50.0% | |
| GCATTCCTTGCTCTTGCAGT+AGG | + | chr2_1:5150326-5150345 | None:intergenic | 50.0% | |
| AAAGATAGCATCGCCGCTCA+AGG | - | chr2_1:5150388-5150407 | Msa0189700:three_prime_UTR | 50.0% | |
| GTAACGACGCTTACCTTGAG+CGG | + | chr2_1:5150404-5150423 | None:intergenic | 50.0% | |
| CGTTACGATCGCAAACAGTC+TGG | - | chr2_1:5150418-5150437 | Msa0189700:three_prime_UTR | 50.0% | |
| CGCAAACAGTCTGGTTATGG+TGG | - | chr2_1:5150427-5150446 | Msa0189700:three_prime_UTR | 50.0% | |
| !! | TGTTCTGAGGTTGCAATGCC+AGG | - | chr2_1:5151027-5151046 | Msa0189700:intron | 50.0% |
| !! | GTTCTGAGGTTGCAATGCCA+GGG | - | chr2_1:5151028-5151047 | Msa0189700:intron | 50.0% |
| GAGAAACATGCTTGCAACCC+TGG | + | chr2_1:5151048-5151067 | None:intergenic | 50.0% | |
| ! | TGGTGGTGATAAGAAGGGCA+AGG | - | chr2_1:5151220-5151239 | Msa0189700:intron | 50.0% |
| GGTGGTGATAAGAAGGGCAA+GGG | - | chr2_1:5151221-5151240 | Msa0189700:intron | 50.0% | |
| GGGAACTTCTCTCTTCTAGG+TGG | - | chr2_1:5151241-5151260 | Msa0189700:intron | 50.0% | |
| CACGGTGGAGATGATTACCA+TGG | + | chr2_1:5150216-5150235 | None:intergenic | 50.0% | |
| TTACGTAGGAACAGACACGG+TGG | + | chr2_1:5150231-5150250 | None:intergenic | 50.0% | |
| GCATTCCTTGCTCTTGCAGT+AGG | + | chr2_1:5150326-5150345 | None:intergenic | 50.0% | |
| AAAGATAGCATCGCCGCTCA+AGG | - | chr2_1:5150388-5150407 | Msa0189700:three_prime_UTR | 50.0% | |
| GTAACGACGCTTACCTTGAG+CGG | + | chr2_1:5150404-5150423 | None:intergenic | 50.0% | |
| CGTTACGATCGCAAACAGTC+TGG | - | chr2_1:5150418-5150437 | Msa0189700:three_prime_UTR | 50.0% | |
| CGCAAACAGTCTGGTTATGG+TGG | - | chr2_1:5150427-5150446 | Msa0189700:three_prime_UTR | 50.0% | |
| !! | TGTTCTGAGGTTGCAATGCC+AGG | - | chr2_1:5151027-5151046 | Msa0189700:intron | 50.0% |
| !! | GTTCTGAGGTTGCAATGCCA+GGG | - | chr2_1:5151028-5151047 | Msa0189700:intron | 50.0% |
| GAGAAACATGCTTGCAACCC+TGG | + | chr2_1:5151048-5151067 | None:intergenic | 50.0% | |
| ! | TGGTGGTGATAAGAAGGGCA+AGG | - | chr2_1:5151220-5151239 | Msa0189700:intron | 50.0% |
| GGTGGTGATAAGAAGGGCAA+GGG | - | chr2_1:5151221-5151240 | Msa0189700:intron | 50.0% | |
| GGGAACTTCTCTCTTCTAGG+TGG | - | chr2_1:5151241-5151260 | Msa0189700:intron | 50.0% | |
| !! | GCGCGTGGATTGGATCTGAG+AGG | + | chr2_1:5150188-5150207 | None:intergenic | 60.0% |
| !! | ATTACCATGGTGACGGCGCG+TGG | + | chr2_1:5150203-5150222 | None:intergenic | 60.0% |
| !! | GCGCGTGGATTGGATCTGAG+AGG | + | chr2_1:5150188-5150207 | None:intergenic | 60.0% |
| !! | ATTACCATGGTGACGGCGCG+TGG | + | chr2_1:5150203-5150222 | None:intergenic | 60.0% |
| !! | CATGGTGACGGCGCGTGGAT+TGG | + | chr2_1:5150198-5150217 | None:intergenic | 65.0% |
| CAATCCACGCGCCGTCACCA+TGG | - | chr2_1:5150196-5150215 | Msa0189700:three_prime_UTR | 65.0% | |
| !! | CATGGTGACGGCGCGTGGAT+TGG | + | chr2_1:5150198-5150217 | None:intergenic | 65.0% |
| CAATCCACGCGCCGTCACCA+TGG | - | chr2_1:5150196-5150215 | Msa0189700:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 5150124 | 5151721 | 5150124 | ID=Msa0189700;Name=Msa0189700 |
| chr2_1 | mRNA | 5150124 | 5151721 | 5150124 | ID=Msa0189700-mRNA-1;Parent=Msa0189700;Name=Msa0189700-mRNA-1;_AED=0.05;_eAED=0.05;_QI=91|1|1|1|0.66|0.75|4|462|105 |
| chr2_1 | exon | 5150124 | 5150645 | 5150124 | ID=Msa0189700-mRNA-1:exon:2318;Parent=Msa0189700-mRNA-1 |
| chr2_1 | exon | 5150764 | 5150838 | 5150764 | ID=Msa0189700-mRNA-1:exon:2317;Parent=Msa0189700-mRNA-1 |
| chr2_1 | exon | 5151368 | 5151547 | 5151368 | ID=Msa0189700-mRNA-1:exon:2316;Parent=Msa0189700-mRNA-1 |
| chr2_1 | exon | 5151628 | 5151721 | 5151628 | ID=Msa0189700-mRNA-1:exon:2315;Parent=Msa0189700-mRNA-1 |
| chr2_1 | five_prime_UTR | 5151631 | 5151721 | 5151631 | ID=Msa0189700-mRNA-1:five_prime_utr;Parent=Msa0189700-mRNA-1 |
| chr2_1 | CDS | 5151628 | 5151630 | 5151628 | ID=Msa0189700-mRNA-1:cds;Parent=Msa0189700-mRNA-1 |
| chr2_1 | CDS | 5151368 | 5151547 | 5151368 | ID=Msa0189700-mRNA-1:cds;Parent=Msa0189700-mRNA-1 |
| chr2_1 | CDS | 5150764 | 5150838 | 5150764 | ID=Msa0189700-mRNA-1:cds;Parent=Msa0189700-mRNA-1 |
| chr2_1 | CDS | 5150586 | 5150645 | 5150586 | ID=Msa0189700-mRNA-1:cds;Parent=Msa0189700-mRNA-1 |
| chr2_1 | three_prime_UTR | 5150124 | 5150585 | 5150124 | ID=Msa0189700-mRNA-1:three_prime_utr;Parent=Msa0189700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
