Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002750 | sp|P17093|RS11_SOYBN | 95.000 | 160 | 7 | 1 | 1 | 160 | 1 | 159 | 1.37e-98 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0002790 | 0.984793 | 1.320177e-161 | -8.615850e-47 |
| Msa0002750 | Msa0003780 | 0.876724 | 1.111738e-68 | -8.615850e-47 |
| Msa0002750 | Msa0022970 | 0.871108 | 8.781222e-67 | -8.615850e-47 |
| Msa0002750 | Msa0027260 | 0.862050 | 6.665245e-64 | -8.615850e-47 |
| Msa0002750 | Msa0032260 | 0.807564 | 4.752397e-50 | -8.615850e-47 |
| Msa0002750 | Msa0032780 | 0.811662 | 6.258315e-51 | -8.615850e-47 |
| Msa0002750 | Msa0040690 | 0.836622 | 8.400720e-57 | -8.615850e-47 |
| Msa0002750 | Msa0042280 | 0.840288 | 9.515212e-58 | -8.615850e-47 |
| Msa0002750 | Msa0043660 | 0.815053 | 1.125927e-51 | -8.615850e-47 |
| Msa0002750 | Msa0044890 | 0.832656 | 8.347856e-56 | -8.615850e-47 |
| Msa0002750 | Msa0045730 | 0.852023 | 6.059838e-61 | -8.615850e-47 |
| Msa0002750 | Msa0047160 | 0.836564 | 8.690485e-57 | -8.615850e-47 |
| Msa0002750 | Msa0048180 | 0.868737 | 5.227629e-66 | -8.615850e-47 |
| Msa0002750 | Msa0049370 | 0.832946 | 7.072559e-56 | -8.615850e-47 |
| Msa0002750 | Msa0052790 | 0.802551 | 5.316750e-49 | -8.615850e-47 |
| Msa0002750 | Msa0055180 | 0.832658 | 8.334847e-56 | -8.615850e-47 |
| Msa0002750 | Msa0056470 | 0.834970 | 2.202976e-56 | -8.615850e-47 |
| Msa0002750 | Msa0068970 | 0.825152 | 5.477970e-54 | -8.615850e-47 |
| Msa0002750 | Msa0074030 | 0.870435 | 1.462953e-66 | -8.615850e-47 |
| Msa0002750 | Msa0076040 | 0.802184 | 6.326823e-49 | -8.615850e-47 |
| Msa0002750 | Msa0077530 | 0.826752 | 2.283528e-54 | -8.615850e-47 |
| Msa0002750 | Msa0086750 | 0.909820 | 3.728529e-82 | -8.615850e-47 |
| Msa0002750 | Msa0091880 | 0.835372 | 1.743471e-56 | -8.615850e-47 |
| Msa0002750 | Msa0094470 | 0.838192 | 3.328472e-57 | -8.615850e-47 |
| Msa0002750 | Msa0097580 | 0.846261 | 2.427771e-59 | -8.615850e-47 |
| Msa0002750 | Msa0097600 | 0.820730 | 5.877224e-53 | -8.615850e-47 |
| Msa0002750 | Msa0100730 | 0.802010 | 6.872844e-49 | -8.615850e-47 |
| Msa0002750 | Msa0100740 | 0.825612 | 4.263472e-54 | -8.615850e-47 |
| Msa0002750 | Msa0116130 | 0.854020 | 1.625059e-61 | -8.615850e-47 |
| Msa0002750 | Msa0116670 | 0.879711 | 9.973093e-70 | -8.615850e-47 |
| Msa0002750 | Msa0118710 | 0.877957 | 4.139528e-69 | -8.615850e-47 |
| Msa0002750 | Msa0127310 | 0.807961 | 3.913188e-50 | -8.615850e-47 |
| Msa0002750 | Msa0128860 | 0.876167 | 1.731118e-68 | -8.615850e-47 |
| Msa0002750 | Msa0133540 | 0.900696 | 5.659425e-78 | -8.615850e-47 |
| Msa0002750 | Msa0137550 | 0.813428 | 2.572149e-51 | -8.615850e-47 |
| Msa0002750 | Msa0140820 | 0.810610 | 1.057975e-50 | -8.615850e-47 |
| Msa0002750 | Msa0140850 | 0.806931 | 6.471487e-50 | -8.615850e-47 |
| Msa0002750 | Msa0146340 | 0.898309 | 6.020319e-77 | -8.615850e-47 |
| Msa0002750 | Msa0163760 | 0.840159 | 1.028712e-57 | -8.615850e-47 |
| Msa0002750 | Msa0167480 | 0.835427 | 1.689009e-56 | -8.615850e-47 |
| Msa0002750 | Msa0172900 | 0.817147 | 3.834202e-52 | -8.615850e-47 |
| Msa0002750 | Msa0173530 | 0.881019 | 3.397319e-70 | -8.615850e-47 |
| Msa0002750 | Msa0174730 | 0.875457 | 3.034698e-68 | -8.615850e-47 |
| Msa0002750 | Msa0181490 | 0.891027 | 5.777489e-74 | -8.615850e-47 |
| Msa0002750 | Msa0183090 | 0.852210 | 5.359650e-61 | -8.615850e-47 |
| Msa0002750 | Msa0187690 | 0.802923 | 4.454475e-49 | -8.615850e-47 |
| Msa0002750 | Msa0187930 | 0.867953 | 9.354402e-66 | -8.615850e-47 |
| Msa0002750 | Msa0188350 | 0.800642 | 1.309575e-48 | -8.615850e-47 |
| Msa0002750 | Msa0189300 | 0.808161 | 3.547357e-50 | -8.615850e-47 |
| Msa0002750 | Msa0189700 | 0.880883 | 3.801956e-70 | -8.615850e-47 |
| Msa0002750 | Msa0192230 | 0.804768 | 1.843645e-49 | -8.615850e-47 |
| Msa0002750 | Msa0194540 | 0.858489 | 7.955543e-63 | -8.615850e-47 |
| Msa0002750 | Msa0199880 | 0.803004 | 4.287544e-49 | -8.615850e-47 |
| Msa0002750 | Msa0210330 | 0.812960 | 3.259718e-51 | -8.615850e-47 |
| Msa0002750 | Msa0210360 | 0.854335 | 1.318232e-61 | -8.615850e-47 |
| Msa0002750 | Msa0218830 | 0.863634 | 2.164870e-64 | -8.615850e-47 |
| Msa0002750 | Msa0219120 | 0.847885 | 8.710179e-60 | -8.615850e-47 |
| Msa0002750 | Msa0221030 | 0.850710 | 1.423743e-60 | -8.615850e-47 |
| Msa0002750 | Msa0222730 | 0.816639 | 4.984313e-52 | -8.615850e-47 |
| Msa0002750 | Msa0224560 | 0.805347 | 1.394710e-49 | -8.615850e-47 |
| Msa0002750 | Msa0230490 | 0.854834 | 9.453728e-62 | -8.615850e-47 |
| Msa0002750 | Msa0231100 | 0.843657 | 1.224300e-58 | -8.615850e-47 |
| Msa0002750 | Msa0231660 | 0.809805 | 1.577688e-50 | -8.615850e-47 |
| Msa0002750 | Msa0232010 | 0.881213 | 2.892989e-70 | -8.615850e-47 |
| Msa0002750 | Msa0232080 | 0.882019 | 1.479110e-70 | -8.615850e-47 |
| Msa0002750 | Msa0243140 | 0.807622 | 4.620561e-50 | -8.615850e-47 |
| Msa0002750 | Msa0244780 | 0.874397 | 6.973570e-68 | -8.615850e-47 |
| Msa0002750 | Msa0250820 | 0.896338 | 4.059619e-76 | -8.615850e-47 |
| Msa0002750 | Msa0250870 | 0.850298 | 1.858298e-60 | -8.615850e-47 |
| Msa0002750 | Msa0257450 | 0.878057 | 3.820552e-69 | -8.615850e-47 |
| Msa0002750 | Msa0258850 | 0.871553 | 6.260454e-67 | -8.615850e-47 |
| Msa0002750 | Msa0262310 | 0.802609 | 5.172352e-49 | -8.615850e-47 |
| Msa0002750 | Msa0262480 | 0.832893 | 7.289956e-56 | -8.615850e-47 |
| Msa0002750 | Msa0264010 | 0.878117 | 3.638748e-69 | -8.615850e-47 |
| Msa0002750 | Msa0268130 | 0.862688 | 4.245034e-64 | -8.615850e-47 |
| Msa0002750 | Msa0269180 | 0.814797 | 1.283075e-51 | -8.615850e-47 |
| Msa0002750 | Msa0280610 | 0.804618 | 1.981332e-49 | -8.615850e-47 |
| Msa0002750 | Msa0289580 | 0.909482 | 5.427544e-82 | -8.615850e-47 |
| Msa0002750 | Msa0289610 | 0.912645 | 1.535549e-83 | -8.615850e-47 |
| Msa0002750 | Msa0296720 | 0.846480 | 2.115737e-59 | -8.615850e-47 |
| Msa0002750 | Msa0297830 | 0.801467 | 8.882590e-49 | -8.615850e-47 |
| Msa0002750 | Msa0298200 | 0.865514 | 5.588761e-65 | -8.615850e-47 |
| Msa0002750 | Msa0298990 | 0.869807 | 2.346987e-66 | -8.615850e-47 |
| Msa0002750 | Msa0300350 | 0.836323 | 1.000678e-56 | -8.615850e-47 |
| Msa0002750 | Msa0306690 | 0.885587 | 7.149372e-72 | -8.615850e-47 |
| Msa0002750 | Msa0313100 | 0.832341 | 9.990074e-56 | -8.615850e-47 |
| Msa0002750 | Msa0317910 | 0.830036 | 3.680673e-55 | -8.615850e-47 |
| Msa0002750 | Msa0321640 | 0.852121 | 5.681605e-61 | -8.615850e-47 |
| Msa0002750 | Msa0327300 | 0.911619 | 4.954224e-83 | -8.615850e-47 |
| Msa0002750 | Msa0327330 | 0.918887 | 8.938314e-87 | -8.615850e-47 |
| Msa0002750 | Msa0335840 | 0.808694 | 2.731431e-50 | -8.615850e-47 |
| Msa0002750 | Msa0336010 | 0.890315 | 1.100840e-73 | -8.615850e-47 |
| Msa0002750 | Msa0337650 | 0.807392 | 5.170030e-50 | -8.615850e-47 |
| Msa0002750 | Msa0337670 | 0.846850 | 1.676095e-59 | -8.615850e-47 |
| Msa0002750 | Msa0341880 | 0.816500 | 5.357023e-52 | -8.615850e-47 |
| Msa0002750 | Msa0342850 | 0.839346 | 1.673941e-57 | -8.615850e-47 |
| Msa0002750 | Msa0348830 | 0.866384 | 2.965527e-65 | -8.615850e-47 |
| Msa0002750 | Msa0348990 | 0.820852 | 5.509561e-53 | -8.615850e-47 |
| Msa0002750 | Msa0357900 | 0.802443 | 5.597215e-49 | -8.615850e-47 |
| Msa0002750 | Msa0366890 | 0.820379 | 7.077004e-53 | -8.615850e-47 |
| Msa0002750 | Msa0369450 | 0.822289 | 2.565503e-53 | -8.615850e-47 |
| Msa0002750 | Msa0385580 | 0.811514 | 6.739370e-51 | -8.615850e-47 |
| Msa0002750 | Msa0393370 | 0.829884 | 4.009751e-55 | -8.615850e-47 |
| Msa0002750 | Msa0395890 | 0.822600 | 2.171808e-53 | -8.615850e-47 |
| Msa0002750 | Msa0414800 | 0.818022 | 2.434222e-52 | -8.615850e-47 |
| Msa0002750 | Msa0427150 | 0.809195 | 2.133635e-50 | -8.615850e-47 |
| Msa0002750 | Msa0432210 | 0.800476 | 1.416028e-48 | -8.615850e-47 |
| Msa0002750 | Msa0443390 | 0.859345 | 4.410444e-63 | -8.615850e-47 |
| Msa0002750 | Msa0462110 | 0.824012 | 1.016623e-53 | -8.615850e-47 |
| Msa0002750 | Msa0481850 | 0.878671 | 2.324497e-69 | -8.615850e-47 |
| Msa0002750 | Msa0483110 | 0.873493 | 1.409468e-67 | -8.615850e-47 |
| Msa0002750 | Msa0483390 | 0.803175 | 3.952512e-49 | -8.615850e-47 |
| Msa0002750 | Msa0486070 | 0.835831 | 1.334629e-56 | -8.615850e-47 |
| Msa0002750 | Msa0488820 | 0.807244 | 5.555363e-50 | -8.615850e-47 |
| Msa0002750 | Msa0521050 | 0.864373 | 1.274582e-64 | -8.615850e-47 |
| Msa0002750 | Msa0526540 | 0.895450 | 9.475510e-76 | -8.615850e-47 |
| Msa0002750 | Msa0527150 | 0.841486 | 4.616553e-58 | -8.615850e-47 |
| Msa0002750 | Msa0531650 | 0.831478 | 1.631496e-55 | -8.615850e-47 |
| Msa0002750 | Msa0571920 | 0.848652 | 5.346231e-60 | -8.615850e-47 |
| Msa0002750 | Msa0575170 | 0.816637 | 4.990661e-52 | -8.615850e-47 |
| Msa0002750 | Msa0576940 | 0.890960 | 6.138832e-74 | -8.615850e-47 |
| Msa0002750 | Msa0581110 | 0.812404 | 4.312890e-51 | -8.615850e-47 |
| Msa0002750 | Msa0584030 | 0.801540 | 8.581597e-49 | -8.615850e-47 |
| Msa0002750 | Msa0588360 | 0.875257 | 3.553102e-68 | -8.615850e-47 |
| Msa0002750 | Msa0603320 | 0.867110 | 1.742092e-65 | -8.615850e-47 |
| Msa0002750 | Msa0612390 | 0.807161 | 5.786866e-50 | -8.615850e-47 |
| Msa0002750 | Msa0615440 | 0.843860 | 1.080484e-58 | -8.615850e-47 |
| Msa0002750 | Msa0615580 | 0.821451 | 4.010661e-53 | -8.615850e-47 |
| Msa0002750 | Msa0620890 | 0.830923 | 2.234022e-55 | -8.615850e-47 |
| Msa0002750 | Msa0621950 | 0.845143 | 4.879010e-59 | -8.615850e-47 |
| Msa0002750 | Msa0622750 | 0.864092 | 1.559046e-64 | -8.615850e-47 |
| Msa0002750 | Msa0623200 | 0.854846 | 9.374539e-62 | -8.615850e-47 |
| Msa0002750 | Msa0642160 | 0.817181 | 3.767292e-52 | -8.615850e-47 |
| Msa0002750 | Msa0644350 | 0.832717 | 8.062944e-56 | -8.615850e-47 |
| Msa0002750 | Msa0661300 | 0.838670 | 2.505053e-57 | -8.615850e-47 |
| Msa0002750 | Msa0664560 | 0.800175 | 1.630616e-48 | -8.615850e-47 |
| Msa0002750 | Msa0666230 | 0.855835 | 4.831630e-62 | -8.615850e-47 |
| Msa0002750 | Msa0688850 | 0.830581 | 2.709986e-55 | -8.615850e-47 |
| Msa0002750 | Msa0689260 | 0.801673 | 8.059691e-49 | -8.615850e-47 |
| Msa0002750 | Msa0698490 | 0.845928 | 2.990054e-59 | -8.615850e-47 |
| Msa0002750 | Msa0698660 | 0.844130 | 9.148794e-59 | -8.615850e-47 |
| Msa0002750 | Msa0698780 | 0.858719 | 6.790881e-63 | -8.615850e-47 |
| Msa0002750 | Msa0712610 | 0.862446 | 5.039510e-64 | -8.615850e-47 |
| Msa0002750 | Msa0719420 | 0.821095 | 4.844158e-53 | -8.615850e-47 |
| Msa0002750 | Msa0729200 | 0.868397 | 6.732185e-66 | -8.615850e-47 |
| Msa0002750 | Msa0738100 | 0.868158 | 8.040357e-66 | -8.615850e-47 |
| Msa0002750 | Msa0752910 | 0.803702 | 3.072627e-49 | -8.615850e-47 |
| Msa0002750 | Msa0753140 | 0.820798 | 5.671321e-53 | -8.615850e-47 |
| Msa0002750 | Msa0769590 | 0.872985 | 2.087077e-67 | -8.615850e-47 |
| Msa0002750 | Msa0780490 | 0.839359 | 1.661388e-57 | -8.615850e-47 |
| Msa0002750 | Msa0781080 | 0.807986 | 3.866550e-50 | -8.615850e-47 |
| Msa0002750 | Msa0785130 | 0.864566 | 1.109273e-64 | -8.615850e-47 |
| Msa0002750 | Msa0789680 | 0.821536 | 3.832903e-53 | -8.615850e-47 |
| Msa0002750 | Msa0792420 | 0.839914 | 1.191286e-57 | -8.615850e-47 |
| Msa0002750 | Msa0792760 | 0.831730 | 1.414218e-55 | -8.615850e-47 |
| Msa0002750 | Msa0802410 | 0.805012 | 1.639330e-49 | -8.615850e-47 |
| Msa0002750 | Msa0806880 | 0.884848 | 1.350377e-71 | -8.615850e-47 |
| Msa0002750 | Msa0817540 | 0.889884 | 1.622799e-73 | -8.615850e-47 |
| Msa0002750 | Msa0835420 | 0.812194 | 4.793858e-51 | -8.615850e-47 |
| Msa0002750 | Msa0858770 | 0.803212 | 3.881985e-49 | -8.615850e-47 |
| Msa0002750 | Msa0867060 | 0.807859 | 4.115116e-50 | -8.615850e-47 |
| Msa0002750 | Msa0876170 | 0.812466 | 4.181044e-51 | -8.615850e-47 |
| Msa0002750 | Msa0881290 | 0.880677 | 4.509248e-70 | -8.615850e-47 |
| Msa0002750 | Msa0888810 | 0.825197 | 5.343802e-54 | -8.615850e-47 |
| Msa0002750 | Msa0902760 | 0.841584 | 4.347978e-58 | -8.615850e-47 |
| Msa0002750 | Msa0930490 | 0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0002750 | Msa0945480 | 0.819124 | 1.369072e-52 | -8.615850e-47 |
| Msa0002750 | Msa0953310 | 0.905032 | 6.585588e-80 | -8.615850e-47 |
| Msa0002750 | Msa0989540 | 0.829700 | 4.444759e-55 | -8.615850e-47 |
| Msa0002750 | Msa1006840 | 0.872624 | 2.757422e-67 | -8.615850e-47 |
| Msa0002750 | Msa1010310 | 0.839283 | 1.738130e-57 | -8.615850e-47 |
| Msa0002750 | Msa1012740 | 0.842633 | 2.294863e-58 | -8.615850e-47 |
| Msa0002750 | Msa1013400 | 0.842509 | 2.476370e-58 | -8.615850e-47 |
| Msa0002750 | Msa1019240 | 0.869823 | 2.320218e-66 | -8.615850e-47 |
| Msa0002750 | Msa1019260 | 0.877762 | 4.843835e-69 | -8.615850e-47 |
| Msa0002750 | Msa1039520 | 0.817084 | 3.961225e-52 | -8.615850e-47 |
| Msa0002750 | Msa1043690 | 0.862559 | 4.650658e-64 | -8.615850e-47 |
| Msa0002750 | Msa1050210 | 0.808041 | 3.762397e-50 | -8.615850e-47 |
| Msa0002750 | Msa1051880 | 0.809984 | 1.443722e-50 | -8.615850e-47 |
| Msa0002750 | Msa1072710 | 0.861030 | 1.365587e-63 | -8.615850e-47 |
| Msa0002750 | Msa1078870 | 0.859864 | 3.078990e-63 | -8.615850e-47 |
| Msa0002750 | Msa1078980 | 0.836855 | 7.326597e-57 | -8.615850e-47 |
| Msa0002750 | Msa1080350 | 0.905029 | 6.603056e-80 | -8.615850e-47 |
| Msa0002750 | Msa1081150 | 0.825779 | 3.891255e-54 | -8.615850e-47 |
| Msa0002750 | Msa1088490 | 0.914079 | 2.919784e-84 | -8.615850e-47 |
| Msa0002750 | Msa1088940 | 0.812138 | 4.929166e-51 | -8.615850e-47 |
| Msa0002750 | Msa1093530 | 0.838807 | 2.308704e-57 | -8.615850e-47 |
| Msa0002750 | Msa1094380 | 0.805212 | 1.488370e-49 | -8.615850e-47 |
| Msa0002750 | Msa1104140 | 0.878950 | 1.854451e-69 | -8.615850e-47 |
| Msa0002750 | Msa1104210 | 0.871898 | 4.810223e-67 | -8.615850e-47 |
| Msa0002750 | Msa1124850 | 0.813974 | 1.950136e-51 | -8.615850e-47 |
| Msa0002750 | Msa1125860 | 0.910835 | 1.199679e-82 | -8.615850e-47 |
| Msa0002750 | Msa1126060 | 0.905567 | 3.744587e-80 | -8.615850e-47 |
| Msa0002750 | Msa1126510 | 0.858049 | 1.075736e-62 | -8.615850e-47 |
| Msa0002750 | Msa1126830 | 0.812342 | 4.448842e-51 | -8.615850e-47 |
| Msa0002750 | Msa1128120 | 0.825259 | 5.167233e-54 | -8.615850e-47 |
| Msa0002750 | Msa1135890 | 0.832272 | 1.039243e-55 | -8.615850e-47 |
| Msa0002750 | Msa1138870 | 0.800911 | 1.154235e-48 | -8.615850e-47 |
| Msa0002750 | Msa1163530 | 0.821075 | 4.895181e-53 | -8.615850e-47 |
| Msa0002750 | Msa1165780 | 0.805068 | 1.595966e-49 | -8.615850e-47 |
| Msa0002750 | Msa1165940 | 0.811716 | 6.090845e-51 | -8.615850e-47 |
| Msa0002750 | Msa1166860 | 0.870786 | 1.121804e-66 | -8.615850e-47 |
| Msa0002750 | Msa1166870 | 0.847078 | 1.451902e-59 | -8.615850e-47 |
| Msa0002750 | Msa1167540 | 0.832805 | 7.667053e-56 | -8.615850e-47 |
| Msa0002750 | Msa1167550 | 0.831006 | 2.131524e-55 | -8.615850e-47 |
| Msa0002750 | Msa1169180 | 0.833536 | 5.040115e-56 | -8.615850e-47 |
| Msa0002750 | Msa1181830 | 0.830526 | 2.794373e-55 | -8.615850e-47 |
| Msa0002750 | Msa1181840 | 0.817743 | 2.815157e-52 | -8.615850e-47 |
| Msa0002750 | Msa1181850 | 0.842708 | 2.192907e-58 | -8.615850e-47 |
| Msa0002750 | Msa1181860 | 0.823622 | 1.254497e-53 | -8.615850e-47 |
| Msa0002750 | Msa1207270 | 0.839364 | 1.656269e-57 | -8.615850e-47 |
| Msa0002750 | Msa1213480 | 0.822848 | 1.901804e-53 | -8.615850e-47 |
| Msa0002750 | Msa1215820 | 0.996333 | 3.325023e-226 | -8.615850e-47 |
| Msa0002750 | Msa1218600 | 0.824003 | 1.021040e-53 | -8.615850e-47 |
| Msa0002750 | Msa1230580 | 0.829066 | 6.335586e-55 | -8.615850e-47 |
| Msa0002750 | Msa1256840 | 0.809836 | 1.554065e-50 | -8.615850e-47 |
| Msa0002750 | Msa1257510 | 0.883030 | 6.331113e-71 | -8.615850e-47 |
| Msa0002750 | Msa1260530 | 0.812782 | 3.565576e-51 | -8.615850e-47 |
| Msa0002750 | Msa1265630 | 0.837769 | 4.275286e-57 | -8.615850e-47 |
| Msa0002750 | Msa1266060 | 0.804647 | 1.953973e-49 | -8.615850e-47 |
| Msa0002750 | Msa1273340 | 0.829865 | 4.052473e-55 | -8.615850e-47 |
| Msa0002750 | Msa1295150 | 0.812773 | 3.581522e-51 | -8.615850e-47 |
| Msa0002750 | Msa1295170 | 0.830022 | 3.709764e-55 | -8.615850e-47 |
| Msa0002750 | Msa1299590 | 0.832820 | 7.601065e-56 | -8.615850e-47 |
| Msa0002750 | Msa1300380 | 0.819246 | 1.284596e-52 | -8.615850e-47 |
| Msa0002750 | Msa1305050 | 0.849795 | 2.571299e-60 | -8.615850e-47 |
| Msa0002750 | Msa1311400 | 0.812870 | 3.410593e-51 | -8.615850e-47 |
| Msa0002750 | Msa1321790 | 0.843978 | 1.004378e-58 | -8.615850e-47 |
| Msa0002750 | Msa1331710 | 0.832701 | 8.134821e-56 | -8.615850e-47 |
| Msa0002750 | Msa1332250 | 0.833938 | 3.999745e-56 | -8.615850e-47 |
| Msa0002750 | Msa1338190 | 0.878733 | 2.211038e-69 | -8.615850e-47 |
| Msa0002750 | Msa1343260 | 0.883960 | 2.881845e-71 | -8.615850e-47 |
| Msa0002750 | Msa1349570 | 0.865616 | 5.189845e-65 | -8.615850e-47 |
| Msa0002750 | Msa1356790 | 0.875805 | 2.306440e-68 | -8.615850e-47 |
| Msa0002750 | Msa1358250 | 0.803768 | 2.977014e-49 | -8.615850e-47 |
| Msa0002750 | Msa1362790 | 0.847603 | 1.041603e-59 | -8.615850e-47 |
| Msa0002750 | Msa1363330 | 0.898422 | 5.388033e-77 | -8.615850e-47 |
| Msa0002750 | Msa1366180 | 0.918176 | 2.152691e-86 | -8.615850e-47 |
| Msa0002750 | Msa1369190 | 0.847177 | 1.363362e-59 | -8.615850e-47 |
| Msa0002750 | Msa1374120 | 0.865970 | 4.012157e-65 | -8.615850e-47 |
| Msa0002750 | Msa1379760 | 0.876920 | 9.514380e-69 | -8.615850e-47 |
| Msa0002750 | Msa1382620 | 0.833010 | 6.817178e-56 | -8.615850e-47 |
| Msa0002750 | Msa1386600 | 0.899043 | 2.927160e-77 | -8.615850e-47 |
| Msa0002750 | Msa1387410 | 0.858225 | 9.530896e-63 | -8.615850e-47 |
| Msa0002750 | Msa1394290 | 0.830503 | 2.831528e-55 | -8.615850e-47 |
| Msa0002750 | Msa1399530 | 0.868579 | 5.877599e-66 | -8.615850e-47 |
| Msa0002750 | Msa1407070 | 0.840955 | 6.367348e-58 | -8.615850e-47 |
| Msa0002750 | Msa1413500 | 0.885950 | 5.224743e-72 | -8.615850e-47 |
| Msa0002750 | Msa1418690 | 0.811495 | 6.804766e-51 | -8.615850e-47 |
| Msa0002750 | Msa1418760 | 0.825536 | 4.442945e-54 | -8.615850e-47 |
| Msa0002750 | Msa1426120 | 0.864805 | 9.335316e-65 | -8.615850e-47 |
| Msa0002750 | Msa1426370 | 0.848977 | 4.343991e-60 | -8.615850e-47 |
| Msa0002750 | Msa1426490 | 0.918702 | 1.124366e-86 | -8.615850e-47 |
| Msa0002750 | Msa1427560 | 0.858456 | 8.137317e-63 | -8.615850e-47 |
| Msa0002750 | Msa1432700 | 0.867430 | 1.376150e-65 | -8.615850e-47 |
| Msa0002750 | Msa1433310 | 0.858063 | 1.065259e-62 | -8.615850e-47 |
| Msa0002750 | Msa1448690 | 0.871888 | 4.847584e-67 | -8.615850e-47 |
| Msa0002750 | Msa1450280 | 0.858593 | 7.404182e-63 | -8.615850e-47 |
| Msa0002750 | Msa1456050 | 0.885227 | 9.751463e-72 | -8.615850e-47 |
| Msa0002750 | Msa1457920 | 0.821896 | 3.163597e-53 | -8.615850e-47 |
| Msa0002750 | Msa1465260 | 0.825279 | 5.110837e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002750 | MtrunA17_Chr4g0065131 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 4.13e-116 | 325 |
| Msa0002750 | MtrunA17_Chr8g0372611 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 1.17e-115 | 323 |
| Msa0002750 | MtrunA17_Chr1g0152301 | 93.789 | 161 | 9 | 1 | 1 | 160 | 1 | 161 | 6.37e-100 | 284 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002750 | AT3G48930.1 | 91.250 | 160 | 14 | 0 | 1 | 160 | 1 | 160 | 3.55e-97 | 277 |
| Msa0002750 | AT5G23740.1 | 90.000 | 160 | 15 | 1 | 1 | 160 | 1 | 159 | 2.67e-95 | 273 |
| Msa0002750 | AT4G30800.1 | 90.625 | 160 | 14 | 1 | 1 | 160 | 1 | 159 | 1.41e-93 | 268 |
Find 71 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAAATGGCGAAATAAATT+AGG | 0.187394 | 1_1:+4955940 | Msa0002750:five_prime_UTR |
| AATACAAGCGCTTTCTTATC+AGG | 0.209242 | 1_1:-4958228 | None:intergenic |
| GAAGGAGATCATGTTATTAT+TGG | 0.232109 | 1_1:+4957721 | Msa0002750:CDS |
| ATGGAAACATTGCCAGTAAA+AGG | 0.250015 | 1_1:-4957454 | None:intergenic |
| GGAACCTTCAATGGCTTCTC+TGG | 0.256456 | 1_1:-4956396 | None:intergenic |
| ATTGCTCCGGTCCAGTAAAA+TGG | 0.334230 | 1_1:+4955926 | Msa0002750:five_prime_UTR |
| CCATAGCATTGTAATAAAAT+CGG | 0.339068 | 1_1:+4955896 | Msa0002750:five_prime_UTR |
| TTCTTTAAATCCGTTGGTCT+TGG | 0.342978 | 1_1:+4956362 | Msa0002750:CDS |
| AGATGTGATGAGAGTAATTC+TGG | 0.347310 | 1_1:+4957979 | Msa0002750:exon |
| AAGGAGATCATGTTATTATT+GGG | 0.351302 | 1_1:+4957722 | Msa0002750:CDS |
| GCTGGTTCATCCAGTGGTGC+TGG | 0.354296 | 1_1:+4957932 | Msa0002750:CDS |
| TAAAATGGCGAAATAAATTA+GGG | 0.356524 | 1_1:+4955941 | Msa0002750:five_prime_UTR |
| ACCCTCTCACTGAAATTTGT+TGG | 0.362133 | 1_1:-4955975 | None:intergenic |
| TGAATAGGACTATTATTGTT+AGG | 0.366373 | 1_1:+4957518 | Msa0002750:CDS |
| GCTGGGAAGAAGGCATTTAC+TGG | 0.369417 | 1_1:+4957950 | Msa0002750:CDS |
| AGCAACCTAAAGTGTTTCTA+TGG | 0.384927 | 1_1:+4956190 | Msa0002750:CDS |
| ATCACCCTGCTTCCGTGTTA+AGG | 0.389482 | 1_1:+4957699 | Msa0002750:CDS |
| ACATACCATAGAAACACTTT+AGG | 0.392416 | 1_1:-4956195 | None:intergenic |
| TCCTTCCTTAACACGGAAGC+AGG | 0.400654 | 1_1:-4957704 | None:intergenic |
| TTACTGGCAATGTTTCCATC+CGG | 0.434194 | 1_1:+4957458 | Msa0002750:CDS |
| TACTGGCAATGTTTCCATCC+GGG | 0.437436 | 1_1:+4957459 | Msa0002750:CDS |
| GTCACAGTGCTAAGATGAAT+AGG | 0.443080 | 1_1:+4957503 | Msa0002750:CDS |
| AACCGCTTCTTTAAATCCGT+TGG | 0.460564 | 1_1:+4956356 | Msa0002750:CDS |
| AAAGCAAAACAAAATTGAAC+AGG | 0.460920 | 1_1:-4958028 | None:intergenic |
| AGGGCACTTCTTGTCAATGT+AGG | 0.469506 | 1_1:-4957434 | None:intergenic |
| GACGTTGAACCTCACAGTCT+TGG | 0.472416 | 1_1:-4957894 | None:intergenic |
| TGCCTTCTTCCCAGCACCAC+TGG | 0.477160 | 1_1:-4957942 | None:intergenic |
| TCCAACAAATTTCAGTGAGA+GGG | 0.477757 | 1_1:+4955974 | Msa0002750:five_prime_UTR |
| ATCCAGTGGTGCTGGGAAGA+AGG | 0.479938 | 1_1:+4957940 | Msa0002750:CDS |
| CAGCCATGGTGAAGAAGCTT+CGG | 0.482612 | 1_1:-4956043 | None:intergenic |
| ATGTTATTATTGGGCAATGC+AGG | 0.485129 | 1_1:+4957731 | Msa0002750:CDS |
| TTGAAGTTAAATTCTGTCGT+TGG | 0.486172 | 1_1:+4958050 | Msa0002750:three_prime_UTR |
| CTGGTTCATCCAGTGGTGCT+GGG | 0.492604 | 1_1:+4957933 | Msa0002750:CDS |
| AATCGGGTTCATTATTGCTC+CGG | 0.493717 | 1_1:+4955913 | Msa0002750:five_prime_UTR |
| CATAGCATTGTAATAAAATC+GGG | 0.494684 | 1_1:+4955897 | Msa0002750:five_prime_UTR |
| GTTAATTACTTGTTCAGCCA+TGG | 0.496408 | 1_1:-4956057 | None:intergenic |
| AAAGGAAAGAGGCCTGGAAA+AGG | 0.502986 | 1_1:+4956329 | Msa0002750:CDS |
| AGCTAAAATACGGCCCCGGA+TGG | 0.510722 | 1_1:-4957473 | None:intergenic |
| GACAAGTTCCAGCTAAAATA+CGG | 0.511848 | 1_1:-4957483 | None:intergenic |
| TGTCGTTGGATACAAGTTGA+AGG | 0.514126 | 1_1:+4958064 | Msa0002750:three_prime_UTR |
| TTCCAACAAATTTCAGTGAG+AGG | 0.514757 | 1_1:+4955973 | Msa0002750:five_prime_UTR |
| TGGAAACATTGCCAGTAAAA+GGG | 0.518269 | 1_1:-4957453 | None:intergenic |
| ACTCCCAGAGAAGCCATTGA+AGG | 0.523893 | 1_1:+4956392 | Msa0002750:CDS |
| TTGGTAGCTCAAAGAAGAGT+GGG | 0.529884 | 1_1:+4956306 | Msa0002750:intron |
| GCACCACTGGATGAACCAGC+TGG | 0.536114 | 1_1:-4957929 | None:intergenic |
| AGTGGGAAAGGAAAGAGGCC+TGG | 0.536739 | 1_1:+4956323 | Msa0002750:CDS |
| GAGTAATTCTGGTTTCTGTA+TGG | 0.556390 | 1_1:+4957990 | Msa0002750:three_prime_UTR |
| CCCTGCTTCCGTGTTAAGGA+AGG | 0.558291 | 1_1:+4957703 | Msa0002750:CDS |
| GAACCTTCAATGGCTTCTCT+GGG | 0.562688 | 1_1:-4956395 | None:intergenic |
| GTCTTGAAAGTGATCCCAGC+TGG | 0.565686 | 1_1:+4957914 | Msa0002750:CDS |
| ATCCCAGCTGGTTCATCCAG+TGG | 0.566568 | 1_1:+4957926 | Msa0002750:CDS |
| AGAAGAGTGGGAAAGGAAAG+AGG | 0.567345 | 1_1:+4956318 | Msa0002750:CDS |
| ACTGGCAATGTTTCCATCCG+GGG | 0.570865 | 1_1:+4957460 | Msa0002750:CDS |
| AAGCAGGGTGATACATGAGC+AGG | 0.574164 | 1_1:-4957688 | None:intergenic |
| GGAAAGAGGCCTGGAAAAGG+TGG | 0.575072 | 1_1:+4956332 | Msa0002750:CDS |
| TTGTGTGTTACAGACTGAGA+AGG | 0.577565 | 1_1:+4956158 | Msa0002750:intron |
| TTCCAGCTAAAATACGGCCC+CGG | 0.583185 | 1_1:-4957477 | None:intergenic |
| ATAGGACTATTATTGTTAGG+AGG | 0.587464 | 1_1:+4957521 | Msa0002750:CDS |
| AGCTCAAAGAAGAGTGGGAA+AGG | 0.587623 | 1_1:+4956311 | Msa0002750:intron |
| GACCAACGGATTTAAAGAAG+CGG | 0.587920 | 1_1:-4956358 | None:intergenic |
| TTTGGTAGCTCAAAGAAGAG+TGG | 0.594148 | 1_1:+4956305 | Msa0002750:intron |
| CTCTATTTAGATATGAGAAG+AGG | 0.599289 | 1_1:+4957653 | Msa0002750:intron |
| AACCTCACAGTCTTGGAGAG+AGG | 0.610094 | 1_1:-4957887 | None:intergenic |
| ATTCCGAAGCTTCTTCACCA+TGG | 0.616570 | 1_1:+4956040 | Msa0002750:exon |
| CATGATCTCCTTCCTTAACA+CGG | 0.626861 | 1_1:-4957711 | None:intergenic |
| CACCACTGGATGAACCAGCT+GGG | 0.630037 | 1_1:-4957928 | None:intergenic |
| CCTTCCTTAACACGGAAGCA+GGG | 0.633141 | 1_1:-4957703 | None:intergenic |
| ACTTTATCAAGAAGTATCAG+AGG | 0.634593 | 1_1:+4957554 | Msa0002750:CDS |
| GGCCTCTCTCCAAGACTGTG+AGG | 0.650917 | 1_1:+4957885 | Msa0002750:intron |
| AGTCTTAAATCCAAGACCAA+CGG | 0.666807 | 1_1:-4956372 | None:intergenic |
| GAAGCTTCGGAATTTCGCAG+AGG | 0.714721 | 1_1:-4956030 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTATTTTAAAAAT+AGG | + | chr1_1:4957409-4957428 | Msa0002750:intron | 0.0% |
| !!! | ATTTTTTTTATTTTAAAAAT+AGG | + | chr1_1:4957409-4957428 | Msa0002750:intron | 0.0% |
| !!! | AATTTATTGTGATATTTTAT+TGG | + | chr1_1:4956439-4956458 | Msa0002750:intron | 10.0% |
| !!! | AAAAAAACTTAATTGAATTT+TGG | + | chr1_1:4958148-4958167 | Msa0002750:intron | 10.0% |
| !!! | AATTTATTGTGATATTTTAT+TGG | + | chr1_1:4956439-4956458 | Msa0002750:intron | 10.0% |
| !!! | AAAAAAACTTAATTGAATTT+TGG | + | chr1_1:4958148-4958167 | Msa0002750:intron | 10.0% |
| !!! | AAAAAAGGATAAATCATTTT+GGG | - | chr1_1:4956234-4956253 | None:intergenic | 15.0% |
| !!! | AAAAAAAGGATAAATCATTT+TGG | - | chr1_1:4956235-4956254 | None:intergenic | 15.0% |
| !!! | AAAAAAGGATAAATCATTTT+GGG | - | chr1_1:4956234-4956253 | None:intergenic | 15.0% |
| !!! | AAAAAAAGGATAAATCATTT+TGG | - | chr1_1:4956235-4956254 | None:intergenic | 15.0% |
| !! | TAAAATGGCGAAATAAATTA+GGG | + | chr1_1:4955941-4955960 | Msa0002750:five_prime_UTR | 20.0% |
| !!! | GTTTGTTATTTGATTGAATT+TGG | + | chr1_1:4956287-4956306 | Msa0002750:intron | 20.0% |
| !!! | TGTGCAATAAATGTTTTAAT+TGG | + | chr1_1:4956631-4956650 | Msa0002750:intron | 20.0% |
| !! | ACATCATATATTAAAGACTA+TGG | - | chr1_1:4956812-4956831 | None:intergenic | 20.0% |
| !!! | AATACAAAATGGATTTCAAA+AGG | - | chr1_1:4957109-4957128 | None:intergenic | 20.0% |
| !!! | ATAATTTAAGACACAGAAAA+AGG | - | chr1_1:4957776-4957795 | None:intergenic | 20.0% |
| !!! | AAGGATTTAGATTTTCATTA+TGG | + | chr1_1:4958083-4958102 | Msa0002750:three_prime_UTR | 20.0% |
| !! | TAAAATGGCGAAATAAATTA+GGG | + | chr1_1:4955941-4955960 | Msa0002750:five_prime_UTR | 20.0% |
| !!! | GTTTGTTATTTGATTGAATT+TGG | + | chr1_1:4956287-4956306 | Msa0002750:intron | 20.0% |
| !!! | TGTGCAATAAATGTTTTAAT+TGG | + | chr1_1:4956631-4956650 | Msa0002750:intron | 20.0% |
| !! | ACATCATATATTAAAGACTA+TGG | - | chr1_1:4956812-4956831 | None:intergenic | 20.0% |
| !!! | AATACAAAATGGATTTCAAA+AGG | - | chr1_1:4957109-4957128 | None:intergenic | 20.0% |
| !!! | ATAATTTAAGACACAGAAAA+AGG | - | chr1_1:4957776-4957795 | None:intergenic | 20.0% |
| !!! | AAGGATTTAGATTTTCATTA+TGG | + | chr1_1:4958083-4958102 | Msa0002750:three_prime_UTR | 20.0% |
| ! | CCATAGCATTGTAATAAAAT+CGG | + | chr1_1:4955896-4955915 | Msa0002750:five_prime_UTR | 25.0% |
| ! | CATAGCATTGTAATAAAATC+GGG | + | chr1_1:4955897-4955916 | Msa0002750:five_prime_UTR | 25.0% |
| !!! | AATTTATTTCGCCATTTTAC+TGG | - | chr1_1:4955940-4955959 | None:intergenic | 25.0% |
| ! | GTAAAATGGCGAAATAAATT+AGG | + | chr1_1:4955940-4955959 | Msa0002750:five_prime_UTR | 25.0% |
| !! | TTGTGATATTTTATTGGATC+TGG | + | chr1_1:4956445-4956464 | Msa0002750:intron | 25.0% |
| !! | TCACAAATAGTCAATTTTGT+AGG | + | chr1_1:4956498-4956517 | Msa0002750:intron | 25.0% |
| !!! | TGATGTTTTAATGTATGATG+TGG | + | chr1_1:4956826-4956845 | Msa0002750:intron | 25.0% |
| ! | ACATCAATGCATTTACATTT+CGG | - | chr1_1:4957000-4957019 | None:intergenic | 25.0% |
| ! | AAAGAAACAACAATGTCATT+TGG | - | chr1_1:4957283-4957302 | None:intergenic | 25.0% |
| ! | AAAGAAACAACAAAGTCATT+TGG | - | chr1_1:4957343-4957362 | None:intergenic | 25.0% |
| ! | TGAATAGGACTATTATTGTT+AGG | + | chr1_1:4957518-4957537 | Msa0002750:CDS | 25.0% |
| ! | AAGGAGATCATGTTATTATT+GGG | + | chr1_1:4957722-4957741 | Msa0002750:CDS | 25.0% |
| ! | AAAGCAAAACAAAATTGAAC+AGG | - | chr1_1:4958031-4958050 | None:intergenic | 25.0% |
| !!! | TTTTTGATTTTTTAGACGTG+AGG | - | chr1_1:4958195-4958214 | None:intergenic | 25.0% |
| ! | CCATAGCATTGTAATAAAAT+CGG | + | chr1_1:4955896-4955915 | Msa0002750:five_prime_UTR | 25.0% |
| ! | CATAGCATTGTAATAAAATC+GGG | + | chr1_1:4955897-4955916 | Msa0002750:five_prime_UTR | 25.0% |
| !!! | AATTTATTTCGCCATTTTAC+TGG | - | chr1_1:4955940-4955959 | None:intergenic | 25.0% |
| ! | GTAAAATGGCGAAATAAATT+AGG | + | chr1_1:4955940-4955959 | Msa0002750:five_prime_UTR | 25.0% |
| !! | TTGTGATATTTTATTGGATC+TGG | + | chr1_1:4956445-4956464 | Msa0002750:intron | 25.0% |
| !! | TCACAAATAGTCAATTTTGT+AGG | + | chr1_1:4956498-4956517 | Msa0002750:intron | 25.0% |
| !!! | TGATGTTTTAATGTATGATG+TGG | + | chr1_1:4956826-4956845 | Msa0002750:intron | 25.0% |
| ! | ACATCAATGCATTTACATTT+CGG | - | chr1_1:4957000-4957019 | None:intergenic | 25.0% |
| ! | AAAGAAACAACAATGTCATT+TGG | - | chr1_1:4957283-4957302 | None:intergenic | 25.0% |
| ! | AAAGAAACAACAAAGTCATT+TGG | - | chr1_1:4957343-4957362 | None:intergenic | 25.0% |
| ! | TGAATAGGACTATTATTGTT+AGG | + | chr1_1:4957518-4957537 | Msa0002750:CDS | 25.0% |
| ! | AAGGAGATCATGTTATTATT+GGG | + | chr1_1:4957722-4957741 | Msa0002750:CDS | 25.0% |
| ! | AAAGCAAAACAAAATTGAAC+AGG | - | chr1_1:4958031-4958050 | None:intergenic | 25.0% |
| !!! | TTTTTGATTTTTTAGACGTG+AGG | - | chr1_1:4958195-4958214 | None:intergenic | 25.0% |
| ! | CCGATTTTATTACAATGCTA+TGG | - | chr1_1:4955899-4955918 | None:intergenic | 30.0% |
| TAAGAACAACCGAAACAAAA+GGG | - | chr1_1:4956097-4956116 | None:intergenic | 30.0% | |
| ACATACCATAGAAACACTTT+AGG | - | chr1_1:4956198-4956217 | None:intergenic | 30.0% | |
| CAACAAATCGAAGGAAAAAA+AGG | - | chr1_1:4956249-4956268 | None:intergenic | 30.0% | |
| TCAAAATCACAACAAATCGA+AGG | - | chr1_1:4956258-4956277 | None:intergenic | 30.0% | |
| ACAATAAATTCACAATGCAG+AGG | - | chr1_1:4956429-4956448 | None:intergenic | 30.0% | |
| GAATTTCAACAAAATCACAG+TGG | - | chr1_1:4956684-4956703 | None:intergenic | 30.0% | |
| !! | AAAGTATAGCCTTTGAGTTT+TGG | + | chr1_1:4956704-4956723 | Msa0002750:intron | 30.0% |
| GAAGATTAATCTTTGATAGG+TGG | - | chr1_1:4956762-4956781 | None:intergenic | 30.0% | |
| CAGGAAGATTAATCTTTGAT+AGG | - | chr1_1:4956765-4956784 | None:intergenic | 30.0% | |
| CATGTGGCTGAATTTATTAT+TGG | + | chr1_1:4956851-4956870 | Msa0002750:intron | 30.0% | |
| TTCTGTCATGCAATCATTAT+TGG | + | chr1_1:4957019-4957038 | Msa0002750:intron | 30.0% | |
| !! | AGCATATTATTTTGCTAGCT+AGG | - | chr1_1:4957073-4957092 | None:intergenic | 30.0% |
| CATTGGACTCTAATACAAAA+TGG | - | chr1_1:4957120-4957139 | None:intergenic | 30.0% | |
| ! | CATTTTGTATTAGAGTCCAA+TGG | + | chr1_1:4957118-4957137 | Msa0002750:intron | 30.0% |
| ! | ACAACAATGTCATTTGGATT+TGG | - | chr1_1:4957277-4957296 | None:intergenic | 30.0% |
| CAGAAATAAACATGCACATT+CGG | - | chr1_1:4957306-4957325 | None:intergenic | 30.0% | |
| ATAGGACTATTATTGTTAGG+AGG | + | chr1_1:4957521-4957540 | Msa0002750:CDS | 30.0% | |
| !! | ACTTTATCAAGAAGTATCAG+AGG | + | chr1_1:4957554-4957573 | Msa0002750:CDS | 30.0% |
| CAAATAAAAACAGGACATCA+AGG | - | chr1_1:4957586-4957605 | None:intergenic | 30.0% | |
| CTCTATTTAGATATGAGAAG+AGG | + | chr1_1:4957653-4957672 | Msa0002750:intron | 30.0% | |
| GAAGGAGATCATGTTATTAT+TGG | + | chr1_1:4957721-4957740 | Msa0002750:CDS | 30.0% | |
| GATATAGATGTATGTCTGAT+TGG | + | chr1_1:4957840-4957859 | Msa0002750:intron | 30.0% | |
| !! | TTTATTTGTGCCATTTCATC+AGG | + | chr1_1:4957864-4957883 | Msa0002750:intron | 30.0% |
| TTGAAGTTAAATTCTGTCGT+TGG | + | chr1_1:4958050-4958069 | Msa0002750:three_prime_UTR | 30.0% | |
| ! | CCGATTTTATTACAATGCTA+TGG | - | chr1_1:4955899-4955918 | None:intergenic | 30.0% |
| TAAGAACAACCGAAACAAAA+GGG | - | chr1_1:4956097-4956116 | None:intergenic | 30.0% | |
| ACATACCATAGAAACACTTT+AGG | - | chr1_1:4956198-4956217 | None:intergenic | 30.0% | |
| CAACAAATCGAAGGAAAAAA+AGG | - | chr1_1:4956249-4956268 | None:intergenic | 30.0% | |
| TCAAAATCACAACAAATCGA+AGG | - | chr1_1:4956258-4956277 | None:intergenic | 30.0% | |
| ACAATAAATTCACAATGCAG+AGG | - | chr1_1:4956429-4956448 | None:intergenic | 30.0% | |
| GAATTTCAACAAAATCACAG+TGG | - | chr1_1:4956684-4956703 | None:intergenic | 30.0% | |
| !! | AAAGTATAGCCTTTGAGTTT+TGG | + | chr1_1:4956704-4956723 | Msa0002750:intron | 30.0% |
| GAAGATTAATCTTTGATAGG+TGG | - | chr1_1:4956762-4956781 | None:intergenic | 30.0% | |
| CAGGAAGATTAATCTTTGAT+AGG | - | chr1_1:4956765-4956784 | None:intergenic | 30.0% | |
| CATGTGGCTGAATTTATTAT+TGG | + | chr1_1:4956851-4956870 | Msa0002750:intron | 30.0% | |
| TTCTGTCATGCAATCATTAT+TGG | + | chr1_1:4957019-4957038 | Msa0002750:intron | 30.0% | |
| !! | AGCATATTATTTTGCTAGCT+AGG | - | chr1_1:4957073-4957092 | None:intergenic | 30.0% |
| CATTGGACTCTAATACAAAA+TGG | - | chr1_1:4957120-4957139 | None:intergenic | 30.0% | |
| ! | CATTTTGTATTAGAGTCCAA+TGG | + | chr1_1:4957118-4957137 | Msa0002750:intron | 30.0% |
| ! | ACAACAATGTCATTTGGATT+TGG | - | chr1_1:4957277-4957296 | None:intergenic | 30.0% |
| CAGAAATAAACATGCACATT+CGG | - | chr1_1:4957306-4957325 | None:intergenic | 30.0% | |
| ATAGGACTATTATTGTTAGG+AGG | + | chr1_1:4957521-4957540 | Msa0002750:CDS | 30.0% | |
| !! | ACTTTATCAAGAAGTATCAG+AGG | + | chr1_1:4957554-4957573 | Msa0002750:CDS | 30.0% |
| CAAATAAAAACAGGACATCA+AGG | - | chr1_1:4957586-4957605 | None:intergenic | 30.0% | |
| CTCTATTTAGATATGAGAAG+AGG | + | chr1_1:4957653-4957672 | Msa0002750:intron | 30.0% | |
| GAAGGAGATCATGTTATTAT+TGG | + | chr1_1:4957721-4957740 | Msa0002750:CDS | 30.0% | |
| GATATAGATGTATGTCTGAT+TGG | + | chr1_1:4957840-4957859 | Msa0002750:intron | 30.0% | |
| !! | TTTATTTGTGCCATTTCATC+AGG | + | chr1_1:4957864-4957883 | Msa0002750:intron | 30.0% |
| TTGAAGTTAAATTCTGTCGT+TGG | + | chr1_1:4958050-4958069 | Msa0002750:three_prime_UTR | 30.0% | |
| TTCCAACAAATTTCAGTGAG+AGG | + | chr1_1:4955973-4955992 | Msa0002750:five_prime_UTR | 35.0% | |
| TCCAACAAATTTCAGTGAGA+GGG | + | chr1_1:4955974-4955993 | Msa0002750:five_prime_UTR | 35.0% | |
| GTTAATTACTTGTTCAGCCA+TGG | - | chr1_1:4956060-4956079 | None:intergenic | 35.0% | |
| !! | CTTCCTTTTCCCTTTTGTTT+CGG | + | chr1_1:4956085-4956104 | Msa0002750:intron | 35.0% |
| CTAAGAACAACCGAAACAAA+AGG | - | chr1_1:4956098-4956117 | None:intergenic | 35.0% | |
| ! | AGCAACCTAAAGTGTTTCTA+TGG | + | chr1_1:4956190-4956209 | Msa0002750:CDS | 35.0% |
| ! | TTCTTTAAATCCGTTGGTCT+TGG | + | chr1_1:4956362-4956381 | Msa0002750:CDS | 35.0% |
| AGTCTTAAATCCAAGACCAA+CGG | - | chr1_1:4956375-4956394 | None:intergenic | 35.0% | |
| GGTAAAAAAGGAACCTTCAA+TGG | - | chr1_1:4956408-4956427 | None:intergenic | 35.0% | |
| TCACAATGCAGAGGTAAAAA+AGG | - | chr1_1:4956420-4956439 | None:intergenic | 35.0% | |
| AATGTATGATGTGGATCATG+TGG | + | chr1_1:4956835-4956854 | Msa0002750:intron | 35.0% | |
| !!! | AAGCTTTTGATTTCGAAACC+AGG | + | chr1_1:4956894-4956913 | Msa0002750:intron | 35.0% |
| !!! | AGCTTTTGATTTCGAAACCA+GGG | + | chr1_1:4956895-4956914 | Msa0002750:intron | 35.0% |
| AAACACATGATACAAATCCC+TGG | - | chr1_1:4956915-4956934 | None:intergenic | 35.0% | |
| !! | CCTATACTTTCAAGTTGGAT+TGG | - | chr1_1:4956966-4956985 | None:intergenic | 35.0% |
| ! | CCAATCCAACTTGAAAGTAT+AGG | + | chr1_1:4956963-4956982 | Msa0002750:intron | 35.0% |
| ! | GTAGACCTATACTTTCAAGT+TGG | - | chr1_1:4956971-4956990 | None:intergenic | 35.0% |
| GACAACAAGTGTTATGACTA+GGG | - | chr1_1:4957154-4957173 | None:intergenic | 35.0% | |
| TGACAACAAGTGTTATGACT+AGG | - | chr1_1:4957155-4957174 | None:intergenic | 35.0% | |
| TGGAAACATTGCCAGTAAAA+GGG | - | chr1_1:4957456-4957475 | None:intergenic | 35.0% | |
| ATGGAAACATTGCCAGTAAA+AGG | - | chr1_1:4957457-4957476 | None:intergenic | 35.0% | |
| GACAAGTTCCAGCTAAAATA+CGG | - | chr1_1:4957486-4957505 | None:intergenic | 35.0% | |
| !!! | GTCCTGTTTTTATTTGCACT+TGG | + | chr1_1:4957590-4957609 | Msa0002750:intron | 35.0% |
| CTCCAAGTGCAAATAAAAAC+AGG | - | chr1_1:4957595-4957614 | None:intergenic | 35.0% | |
| ATGTTATTATTGGGCAATGC+AGG | + | chr1_1:4957731-4957750 | Msa0002750:CDS | 35.0% | |
| AGATGTGATGAGAGTAATTC+TGG | + | chr1_1:4957979-4957998 | Msa0002750:exon | 35.0% | |
| !! | GAGTAATTCTGGTTTCTGTA+TGG | + | chr1_1:4957990-4958009 | Msa0002750:three_prime_UTR | 35.0% |
| !!! | GATTTTTTAGACGTGAGGTA+AGG | - | chr1_1:4958190-4958209 | None:intergenic | 35.0% |
| AATACAAGCGCTTTCTTATC+AGG | - | chr1_1:4958231-4958250 | None:intergenic | 35.0% | |
| TTCCAACAAATTTCAGTGAG+AGG | + | chr1_1:4955973-4955992 | Msa0002750:five_prime_UTR | 35.0% | |
| TCCAACAAATTTCAGTGAGA+GGG | + | chr1_1:4955974-4955993 | Msa0002750:five_prime_UTR | 35.0% | |
| GTTAATTACTTGTTCAGCCA+TGG | - | chr1_1:4956060-4956079 | None:intergenic | 35.0% | |
| !! | CTTCCTTTTCCCTTTTGTTT+CGG | + | chr1_1:4956085-4956104 | Msa0002750:intron | 35.0% |
| CTAAGAACAACCGAAACAAA+AGG | - | chr1_1:4956098-4956117 | None:intergenic | 35.0% | |
| ! | AGCAACCTAAAGTGTTTCTA+TGG | + | chr1_1:4956190-4956209 | Msa0002750:CDS | 35.0% |
| ! | TTCTTTAAATCCGTTGGTCT+TGG | + | chr1_1:4956362-4956381 | Msa0002750:CDS | 35.0% |
| AGTCTTAAATCCAAGACCAA+CGG | - | chr1_1:4956375-4956394 | None:intergenic | 35.0% | |
| GGTAAAAAAGGAACCTTCAA+TGG | - | chr1_1:4956408-4956427 | None:intergenic | 35.0% | |
| TCACAATGCAGAGGTAAAAA+AGG | - | chr1_1:4956420-4956439 | None:intergenic | 35.0% | |
| AATGTATGATGTGGATCATG+TGG | + | chr1_1:4956835-4956854 | Msa0002750:intron | 35.0% | |
| !!! | AAGCTTTTGATTTCGAAACC+AGG | + | chr1_1:4956894-4956913 | Msa0002750:intron | 35.0% |
| !!! | AGCTTTTGATTTCGAAACCA+GGG | + | chr1_1:4956895-4956914 | Msa0002750:intron | 35.0% |
| AAACACATGATACAAATCCC+TGG | - | chr1_1:4956915-4956934 | None:intergenic | 35.0% | |
| !! | CCTATACTTTCAAGTTGGAT+TGG | - | chr1_1:4956966-4956985 | None:intergenic | 35.0% |
| ! | CCAATCCAACTTGAAAGTAT+AGG | + | chr1_1:4956963-4956982 | Msa0002750:intron | 35.0% |
| ! | GTAGACCTATACTTTCAAGT+TGG | - | chr1_1:4956971-4956990 | None:intergenic | 35.0% |
| GACAACAAGTGTTATGACTA+GGG | - | chr1_1:4957154-4957173 | None:intergenic | 35.0% | |
| TGACAACAAGTGTTATGACT+AGG | - | chr1_1:4957155-4957174 | None:intergenic | 35.0% | |
| TGGAAACATTGCCAGTAAAA+GGG | - | chr1_1:4957456-4957475 | None:intergenic | 35.0% | |
| ATGGAAACATTGCCAGTAAA+AGG | - | chr1_1:4957457-4957476 | None:intergenic | 35.0% | |
| GACAAGTTCCAGCTAAAATA+CGG | - | chr1_1:4957486-4957505 | None:intergenic | 35.0% | |
| !!! | GTCCTGTTTTTATTTGCACT+TGG | + | chr1_1:4957590-4957609 | Msa0002750:intron | 35.0% |
| CTCCAAGTGCAAATAAAAAC+AGG | - | chr1_1:4957595-4957614 | None:intergenic | 35.0% | |
| ATGTTATTATTGGGCAATGC+AGG | + | chr1_1:4957731-4957750 | Msa0002750:CDS | 35.0% | |
| AGATGTGATGAGAGTAATTC+TGG | + | chr1_1:4957979-4957998 | Msa0002750:exon | 35.0% | |
| !! | GAGTAATTCTGGTTTCTGTA+TGG | + | chr1_1:4957990-4958009 | Msa0002750:three_prime_UTR | 35.0% |
| !!! | GATTTTTTAGACGTGAGGTA+AGG | - | chr1_1:4958190-4958209 | None:intergenic | 35.0% |
| AATACAAGCGCTTTCTTATC+AGG | - | chr1_1:4958231-4958250 | None:intergenic | 35.0% | |
| AATCGGGTTCATTATTGCTC+CGG | + | chr1_1:4955913-4955932 | Msa0002750:five_prime_UTR | 40.0% | |
| !! | ATTTCGCCATTTTACTGGAC+CGG | - | chr1_1:4955935-4955954 | None:intergenic | 40.0% |
| ACCCTCTCACTGAAATTTGT+TGG | - | chr1_1:4955978-4955997 | None:intergenic | 40.0% | |
| CAACCGAAACAAAAGGGAAA+AGG | - | chr1_1:4956091-4956110 | None:intergenic | 40.0% | |
| TTGTGTGTTACAGACTGAGA+AGG | + | chr1_1:4956158-4956177 | Msa0002750:intron | 40.0% | |
| ! | TTTGGTAGCTCAAAGAAGAG+TGG | + | chr1_1:4956305-4956324 | Msa0002750:intron | 40.0% |
| ! | TTGGTAGCTCAAAGAAGAGT+GGG | + | chr1_1:4956306-4956325 | Msa0002750:intron | 40.0% |
| AACCGCTTCTTTAAATCCGT+TGG | + | chr1_1:4956356-4956375 | Msa0002750:CDS | 40.0% | |
| ! | GACCAACGGATTTAAAGAAG+CGG | - | chr1_1:4956361-4956380 | None:intergenic | 40.0% |
| !! | GCCTTTGAGTTTTGGCATAA+TGG | + | chr1_1:4956712-4956731 | Msa0002750:intron | 40.0% |
| GCCATTATGCCAAAACTCAA+AGG | - | chr1_1:4956716-4956735 | None:intergenic | 40.0% | |
| CTAGGGATATCGAAAACCAT+TGG | - | chr1_1:4957137-4957156 | None:intergenic | 40.0% | |
| TGTTGTCATTGATCGTGTCA+TGG | + | chr1_1:4957167-4957186 | Msa0002750:intron | 40.0% | |
| TTACTGGCAATGTTTCCATC+CGG | + | chr1_1:4957458-4957477 | Msa0002750:CDS | 40.0% | |
| GTCACAGTGCTAAGATGAAT+AGG | + | chr1_1:4957503-4957522 | Msa0002750:CDS | 40.0% | |
| CATGATCTCCTTCCTTAACA+CGG | - | chr1_1:4957714-4957733 | None:intergenic | 40.0% | |
| TGTGTGTGTGTGTGTGTAAA+CGG | + | chr1_1:4957811-4957830 | Msa0002750:intron | 40.0% | |
| ! | TGTCGTTGGATACAAGTTGA+AGG | + | chr1_1:4958064-4958083 | Msa0002750:three_prime_UTR | 40.0% |
| AATCGGGTTCATTATTGCTC+CGG | + | chr1_1:4955913-4955932 | Msa0002750:five_prime_UTR | 40.0% | |
| !! | ATTTCGCCATTTTACTGGAC+CGG | - | chr1_1:4955935-4955954 | None:intergenic | 40.0% |
| ACCCTCTCACTGAAATTTGT+TGG | - | chr1_1:4955978-4955997 | None:intergenic | 40.0% | |
| CAACCGAAACAAAAGGGAAA+AGG | - | chr1_1:4956091-4956110 | None:intergenic | 40.0% | |
| TTGTGTGTTACAGACTGAGA+AGG | + | chr1_1:4956158-4956177 | Msa0002750:intron | 40.0% | |
| ! | TTTGGTAGCTCAAAGAAGAG+TGG | + | chr1_1:4956305-4956324 | Msa0002750:intron | 40.0% |
| ! | TTGGTAGCTCAAAGAAGAGT+GGG | + | chr1_1:4956306-4956325 | Msa0002750:intron | 40.0% |
| AACCGCTTCTTTAAATCCGT+TGG | + | chr1_1:4956356-4956375 | Msa0002750:CDS | 40.0% | |
| ! | GACCAACGGATTTAAAGAAG+CGG | - | chr1_1:4956361-4956380 | None:intergenic | 40.0% |
| !! | GCCTTTGAGTTTTGGCATAA+TGG | + | chr1_1:4956712-4956731 | Msa0002750:intron | 40.0% |
| GCCATTATGCCAAAACTCAA+AGG | - | chr1_1:4956716-4956735 | None:intergenic | 40.0% | |
| CTAGGGATATCGAAAACCAT+TGG | - | chr1_1:4957137-4957156 | None:intergenic | 40.0% | |
| TGTTGTCATTGATCGTGTCA+TGG | + | chr1_1:4957167-4957186 | Msa0002750:intron | 40.0% | |
| TTACTGGCAATGTTTCCATC+CGG | + | chr1_1:4957458-4957477 | Msa0002750:CDS | 40.0% | |
| GTCACAGTGCTAAGATGAAT+AGG | + | chr1_1:4957503-4957522 | Msa0002750:CDS | 40.0% | |
| CATGATCTCCTTCCTTAACA+CGG | - | chr1_1:4957714-4957733 | None:intergenic | 40.0% | |
| TGTGTGTGTGTGTGTGTAAA+CGG | + | chr1_1:4957811-4957830 | Msa0002750:intron | 40.0% | |
| ! | TGTCGTTGGATACAAGTTGA+AGG | + | chr1_1:4958064-4958083 | Msa0002750:three_prime_UTR | 40.0% |
| ATTGCTCCGGTCCAGTAAAA+TGG | + | chr1_1:4955926-4955945 | Msa0002750:five_prime_UTR | 45.0% | |
| ATTCCGAAGCTTCTTCACCA+TGG | + | chr1_1:4956040-4956059 | Msa0002750:exon | 45.0% | |
| AGCTCAAAGAAGAGTGGGAA+AGG | + | chr1_1:4956311-4956330 | Msa0002750:intron | 45.0% | |
| AGAAGAGTGGGAAAGGAAAG+AGG | + | chr1_1:4956318-4956337 | Msa0002750:CDS | 45.0% | |
| AAAGGAAAGAGGCCTGGAAA+AGG | + | chr1_1:4956329-4956348 | Msa0002750:CDS | 45.0% | |
| GAACCTTCAATGGCTTCTCT+GGG | - | chr1_1:4956398-4956417 | None:intergenic | 45.0% | |
| CAATCGCAGGTTCATCATTC+AGG | - | chr1_1:4956784-4956803 | None:intergenic | 45.0% | |
| GACTATGGATCTTCAATCGC+AGG | - | chr1_1:4956797-4956816 | None:intergenic | 45.0% | |
| GTGTCATGGCATCATCTACT+TGG | + | chr1_1:4957181-4957200 | Msa0002750:intron | 45.0% | |
| ACACGATCAACGACAACAAG+TGG | - | chr1_1:4957220-4957239 | None:intergenic | 45.0% | |
| TGTTGTCGTTGATCGTGTCA+TGG | + | chr1_1:4957222-4957241 | Msa0002750:intron | 45.0% | |
| GTGTCATGGCATCATCTACT+TGG | + | chr1_1:4957181-4957200 | Msa0002750:intron | 45.0% | |
| ! | AGGGCACTTCTTGTCAATGT+AGG | - | chr1_1:4957437-4957456 | None:intergenic | 45.0% |
| !!! | GACAAGAAGTGCCCTTTTAC+TGG | + | chr1_1:4957442-4957461 | Msa0002750:CDS | 45.0% |
| TACTGGCAATGTTTCCATCC+GGG | + | chr1_1:4957459-4957478 | Msa0002750:CDS | 45.0% | |
| CAATGCAGGTGAGACTCAAT+AGG | + | chr1_1:4957745-4957764 | Msa0002750:intron | 45.0% | |
| ATTGCTCCGGTCCAGTAAAA+TGG | + | chr1_1:4955926-4955945 | Msa0002750:five_prime_UTR | 45.0% | |
| ATTCCGAAGCTTCTTCACCA+TGG | + | chr1_1:4956040-4956059 | Msa0002750:exon | 45.0% | |
| AGCTCAAAGAAGAGTGGGAA+AGG | + | chr1_1:4956311-4956330 | Msa0002750:intron | 45.0% | |
| AGAAGAGTGGGAAAGGAAAG+AGG | + | chr1_1:4956318-4956337 | Msa0002750:CDS | 45.0% | |
| AAAGGAAAGAGGCCTGGAAA+AGG | + | chr1_1:4956329-4956348 | Msa0002750:CDS | 45.0% | |
| GAACCTTCAATGGCTTCTCT+GGG | - | chr1_1:4956398-4956417 | None:intergenic | 45.0% | |
| CAATCGCAGGTTCATCATTC+AGG | - | chr1_1:4956784-4956803 | None:intergenic | 45.0% | |
| GACTATGGATCTTCAATCGC+AGG | - | chr1_1:4956797-4956816 | None:intergenic | 45.0% | |
| GTGTCATGGCATCATCTACT+TGG | + | chr1_1:4957181-4957200 | Msa0002750:intron | 45.0% | |
| ACACGATCAACGACAACAAG+TGG | - | chr1_1:4957220-4957239 | None:intergenic | 45.0% | |
| TGTTGTCGTTGATCGTGTCA+TGG | + | chr1_1:4957222-4957241 | Msa0002750:intron | 45.0% | |
| GTGTCATGGCATCATCTACT+TGG | + | chr1_1:4957181-4957200 | Msa0002750:intron | 45.0% | |
| ! | AGGGCACTTCTTGTCAATGT+AGG | - | chr1_1:4957437-4957456 | None:intergenic | 45.0% |
| !!! | GACAAGAAGTGCCCTTTTAC+TGG | + | chr1_1:4957442-4957461 | Msa0002750:CDS | 45.0% |
| TACTGGCAATGTTTCCATCC+GGG | + | chr1_1:4957459-4957478 | Msa0002750:CDS | 45.0% | |
| CAATGCAGGTGAGACTCAAT+AGG | + | chr1_1:4957745-4957764 | Msa0002750:intron | 45.0% | |
| !! | AAAATAAAAAAAATCATAAA+AGG | - | chr1_1:4957403-4957422 | None:intergenic | 5.0% |
| !! | AAAATAAAAAAAATCATAAA+AGG | - | chr1_1:4957403-4957422 | None:intergenic | 5.0% |
| !!! | AGTGAGAGGGTTTTCGAGTG+CGG | + | chr1_1:4955987-4956006 | Msa0002750:five_prime_UTR | 50.0% |
| GAAGCTTCGGAATTTCGCAG+AGG | - | chr1_1:4956033-4956052 | None:intergenic | 50.0% | |
| CAGCCATGGTGAAGAAGCTT+CGG | - | chr1_1:4956046-4956065 | None:intergenic | 50.0% | |
| ! | AAGCGGTTTCCACCTTTTCC+AGG | - | chr1_1:4956344-4956363 | None:intergenic | 50.0% |
| ACTCCCAGAGAAGCCATTGA+AGG | + | chr1_1:4956392-4956411 | Msa0002750:CDS | 50.0% | |
| GGAACCTTCAATGGCTTCTC+TGG | - | chr1_1:4956399-4956418 | None:intergenic | 50.0% | |
| ACTGGCAATGTTTCCATCCG+GGG | + | chr1_1:4957460-4957479 | Msa0002750:CDS | 50.0% | |
| TTCCAGCTAAAATACGGCCC+CGG | - | chr1_1:4957480-4957499 | None:intergenic | 50.0% | |
| AAGCAGGGTGATACATGAGC+AGG | - | chr1_1:4957691-4957710 | None:intergenic | 50.0% | |
| ATCACCCTGCTTCCGTGTTA+AGG | + | chr1_1:4957699-4957718 | Msa0002750:CDS | 50.0% | |
| CCTTCCTTAACACGGAAGCA+GGG | - | chr1_1:4957706-4957725 | None:intergenic | 50.0% | |
| TCCTTCCTTAACACGGAAGC+AGG | - | chr1_1:4957707-4957726 | None:intergenic | 50.0% | |
| TGCAGGTGAGACTCAATAGG+AGG | + | chr1_1:4957748-4957767 | Msa0002750:intron | 50.0% | |
| TGGAGAGAGGCCTGATGAAA+TGG | - | chr1_1:4957877-4957896 | None:intergenic | 50.0% | |
| AACCTCACAGTCTTGGAGAG+AGG | - | chr1_1:4957890-4957909 | None:intergenic | 50.0% | |
| GACGTTGAACCTCACAGTCT+TGG | - | chr1_1:4957897-4957916 | None:intergenic | 50.0% | |
| GTCTTGAAAGTGATCCCAGC+TGG | + | chr1_1:4957914-4957933 | Msa0002750:CDS | 50.0% | |
| !! | GCTGGGAAGAAGGCATTTAC+TGG | + | chr1_1:4957950-4957969 | Msa0002750:CDS | 50.0% |
| !!! | AGTGAGAGGGTTTTCGAGTG+CGG | + | chr1_1:4955987-4956006 | Msa0002750:five_prime_UTR | 50.0% |
| GAAGCTTCGGAATTTCGCAG+AGG | - | chr1_1:4956033-4956052 | None:intergenic | 50.0% | |
| CAGCCATGGTGAAGAAGCTT+CGG | - | chr1_1:4956046-4956065 | None:intergenic | 50.0% | |
| ! | AAGCGGTTTCCACCTTTTCC+AGG | - | chr1_1:4956344-4956363 | None:intergenic | 50.0% |
| ACTCCCAGAGAAGCCATTGA+AGG | + | chr1_1:4956392-4956411 | Msa0002750:CDS | 50.0% | |
| GGAACCTTCAATGGCTTCTC+TGG | - | chr1_1:4956399-4956418 | None:intergenic | 50.0% | |
| ACTGGCAATGTTTCCATCCG+GGG | + | chr1_1:4957460-4957479 | Msa0002750:CDS | 50.0% | |
| TTCCAGCTAAAATACGGCCC+CGG | - | chr1_1:4957480-4957499 | None:intergenic | 50.0% | |
| AAGCAGGGTGATACATGAGC+AGG | - | chr1_1:4957691-4957710 | None:intergenic | 50.0% | |
| ATCACCCTGCTTCCGTGTTA+AGG | + | chr1_1:4957699-4957718 | Msa0002750:CDS | 50.0% | |
| CCTTCCTTAACACGGAAGCA+GGG | - | chr1_1:4957706-4957725 | None:intergenic | 50.0% | |
| TCCTTCCTTAACACGGAAGC+AGG | - | chr1_1:4957707-4957726 | None:intergenic | 50.0% | |
| TGCAGGTGAGACTCAATAGG+AGG | + | chr1_1:4957748-4957767 | Msa0002750:intron | 50.0% | |
| TGGAGAGAGGCCTGATGAAA+TGG | - | chr1_1:4957877-4957896 | None:intergenic | 50.0% | |
| AACCTCACAGTCTTGGAGAG+AGG | - | chr1_1:4957890-4957909 | None:intergenic | 50.0% | |
| GACGTTGAACCTCACAGTCT+TGG | - | chr1_1:4957897-4957916 | None:intergenic | 50.0% | |
| GTCTTGAAAGTGATCCCAGC+TGG | + | chr1_1:4957914-4957933 | Msa0002750:CDS | 50.0% | |
| !! | GCTGGGAAGAAGGCATTTAC+TGG | + | chr1_1:4957950-4957969 | Msa0002750:CDS | 50.0% |
| AGTGGGAAAGGAAAGAGGCC+TGG | + | chr1_1:4956323-4956342 | Msa0002750:CDS | 55.0% | |
| GGAAAGAGGCCTGGAAAAGG+TGG | + | chr1_1:4956332-4956351 | Msa0002750:CDS | 55.0% | |
| AGCTAAAATACGGCCCCGGA+TGG | - | chr1_1:4957476-4957495 | None:intergenic | 55.0% | |
| !!! | ATCCGGGGCCGTATTTTAGC+TGG | + | chr1_1:4957475-4957494 | Msa0002750:CDS | 55.0% |
| CCCTGCTTCCGTGTTAAGGA+AGG | + | chr1_1:4957703-4957722 | Msa0002750:CDS | 55.0% | |
| ! | ATCCCAGCTGGTTCATCCAG+TGG | + | chr1_1:4957926-4957945 | Msa0002750:CDS | 55.0% |
| CACCACTGGATGAACCAGCT+GGG | - | chr1_1:4957931-4957950 | None:intergenic | 55.0% | |
| CTGGTTCATCCAGTGGTGCT+GGG | + | chr1_1:4957933-4957952 | Msa0002750:CDS | 55.0% | |
| ! | ATCCAGTGGTGCTGGGAAGA+AGG | + | chr1_1:4957940-4957959 | Msa0002750:CDS | 55.0% |
| AGTGGGAAAGGAAAGAGGCC+TGG | + | chr1_1:4956323-4956342 | Msa0002750:CDS | 55.0% | |
| GGAAAGAGGCCTGGAAAAGG+TGG | + | chr1_1:4956332-4956351 | Msa0002750:CDS | 55.0% | |
| AGCTAAAATACGGCCCCGGA+TGG | - | chr1_1:4957476-4957495 | None:intergenic | 55.0% | |
| !!! | ATCCGGGGCCGTATTTTAGC+TGG | + | chr1_1:4957475-4957494 | Msa0002750:CDS | 55.0% |
| CCCTGCTTCCGTGTTAAGGA+AGG | + | chr1_1:4957703-4957722 | Msa0002750:CDS | 55.0% | |
| ! | ATCCCAGCTGGTTCATCCAG+TGG | + | chr1_1:4957926-4957945 | Msa0002750:CDS | 55.0% |
| CACCACTGGATGAACCAGCT+GGG | - | chr1_1:4957931-4957950 | None:intergenic | 55.0% | |
| CTGGTTCATCCAGTGGTGCT+GGG | + | chr1_1:4957933-4957952 | Msa0002750:CDS | 55.0% | |
| ! | ATCCAGTGGTGCTGGGAAGA+AGG | + | chr1_1:4957940-4957959 | Msa0002750:CDS | 55.0% |
| GGCCTCTCTCCAAGACTGTG+AGG | + | chr1_1:4957885-4957904 | Msa0002750:intron | 60.0% | |
| GCACCACTGGATGAACCAGC+TGG | - | chr1_1:4957932-4957951 | None:intergenic | 60.0% | |
| ! | GCTGGTTCATCCAGTGGTGC+TGG | + | chr1_1:4957932-4957951 | Msa0002750:CDS | 60.0% |
| TGCCTTCTTCCCAGCACCAC+TGG | - | chr1_1:4957945-4957964 | None:intergenic | 60.0% | |
| GGCCTCTCTCCAAGACTGTG+AGG | + | chr1_1:4957885-4957904 | Msa0002750:intron | 60.0% | |
| GCACCACTGGATGAACCAGC+TGG | - | chr1_1:4957932-4957951 | None:intergenic | 60.0% | |
| ! | GCTGGTTCATCCAGTGGTGC+TGG | + | chr1_1:4957932-4957951 | Msa0002750:CDS | 60.0% |
| TGCCTTCTTCCCAGCACCAC+TGG | - | chr1_1:4957945-4957964 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 4955896 | 4958253 | 4955896 | ID=Msa0002750;Name=Msa0002750 |
| chr1_1 | mRNA | 4955896 | 4958253 | 4955896 | ID=Msa0002750-mRNA-1;Parent=Msa0002750;Name=Msa0002750-mRNA-1;_AED=0.07;_eAED=0.07;_QI=163|1|1|1|0.83|0.71|7|245|160 |
| chr1_1 | exon | 4955896 | 4956070 | 4955896 | ID=Msa0002750-mRNA-1:exon:1477;Parent=Msa0002750-mRNA-1 |
| chr1_1 | exon | 4956171 | 4956211 | 4956171 | ID=Msa0002750-mRNA-1:exon:1478;Parent=Msa0002750-mRNA-1 |
| chr1_1 | exon | 4956313 | 4956413 | 4956313 | ID=Msa0002750-mRNA-1:exon:1479;Parent=Msa0002750-mRNA-1 |
| chr1_1 | exon | 4957431 | 4957575 | 4957431 | ID=Msa0002750-mRNA-1:exon:1480;Parent=Msa0002750-mRNA-1 |
| chr1_1 | exon | 4957663 | 4957752 | 4957663 | ID=Msa0002750-mRNA-1:exon:1481;Parent=Msa0002750-mRNA-1 |
| chr1_1 | exon | 4957886 | 4958136 | 4957886 | ID=Msa0002750-mRNA-1:exon:1482;Parent=Msa0002750-mRNA-1 |
| chr1_1 | exon | 4958166 | 4958253 | 4958166 | ID=Msa0002750-mRNA-1:exon:1483;Parent=Msa0002750-mRNA-1 |
| chr1_1 | five_prime_UTR | 4955896 | 4956058 | 4955896 | ID=Msa0002750-mRNA-1:five_prime_utr;Parent=Msa0002750-mRNA-1 |
| chr1_1 | CDS | 4956059 | 4956070 | 4956059 | ID=Msa0002750-mRNA-1:cds;Parent=Msa0002750-mRNA-1 |
| chr1_1 | CDS | 4956171 | 4956211 | 4956171 | ID=Msa0002750-mRNA-1:cds;Parent=Msa0002750-mRNA-1 |
| chr1_1 | CDS | 4956313 | 4956413 | 4956313 | ID=Msa0002750-mRNA-1:cds;Parent=Msa0002750-mRNA-1 |
| chr1_1 | CDS | 4957431 | 4957575 | 4957431 | ID=Msa0002750-mRNA-1:cds;Parent=Msa0002750-mRNA-1 |
| chr1_1 | CDS | 4957663 | 4957752 | 4957663 | ID=Msa0002750-mRNA-1:cds;Parent=Msa0002750-mRNA-1 |
| chr1_1 | CDS | 4957886 | 4957979 | 4957886 | ID=Msa0002750-mRNA-1:cds;Parent=Msa0002750-mRNA-1 |
| chr1_1 | three_prime_UTR | 4957980 | 4958136 | 4957980 | ID=Msa0002750-mRNA-1:three_prime_utr;Parent=Msa0002750-mRNA-1 |
| chr1_1 | three_prime_UTR | 4958166 | 4958253 | 4958166 | ID=Msa0002750-mRNA-1:three_prime_utr;Parent=Msa0002750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
