Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881290 | KAF4397433.1 | 99.048 | 105 | 1 | 0 | 1 | 105 | 50 | 154 | 2.20e-68 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881290 | sp|Q96499|RL44_GOSHI | 97.143 | 105 | 3 | 0 | 1 | 105 | 1 | 105 | 4.34e-69 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881290 | A0A7J6HQ78 | 99.048 | 105 | 1 | 0 | 1 | 105 | 50 | 154 | 1.05e-68 | 212 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0881290 | 0.837067 | 6.469438e-57 | -8.615850e-47 |
| Msa0002750 | Msa0881290 | 0.880677 | 4.509248e-70 | -8.615850e-47 |
| Msa0002790 | Msa0881290 | 0.869840 | 2.289671e-66 | -8.615850e-47 |
| Msa0003720 | Msa0881290 | 0.823298 | 1.493612e-53 | -8.615850e-47 |
| Msa0003780 | Msa0881290 | 0.819240 | 1.288394e-52 | -8.615850e-47 |
| Msa0027260 | Msa0881290 | 0.865053 | 7.803837e-65 | -8.615850e-47 |
| Msa0029630 | Msa0881290 | 0.803227 | 3.854124e-49 | -8.615850e-47 |
| Msa0032780 | Msa0881290 | 0.812900 | 3.358984e-51 | -8.615850e-47 |
| Msa0040690 | Msa0881290 | 0.822550 | 2.230916e-53 | -8.615850e-47 |
| Msa0042280 | Msa0881290 | 0.832187 | 1.090426e-55 | -8.615850e-47 |
| Msa0047160 | Msa0881290 | 0.825850 | 3.744253e-54 | -8.615850e-47 |
| Msa0048180 | Msa0881290 | 0.855436 | 6.318213e-62 | -8.615850e-47 |
| Msa0049370 | Msa0881290 | 0.844976 | 5.414725e-59 | -8.615850e-47 |
| Msa0055180 | Msa0881290 | 0.806778 | 6.973221e-50 | -8.615850e-47 |
| Msa0055190 | Msa0881290 | 0.817419 | 3.330157e-52 | -8.615850e-47 |
| Msa0056470 | Msa0881290 | 0.859379 | 4.307977e-63 | -8.615850e-47 |
| Msa0059040 | Msa0881290 | 0.804088 | 2.555231e-49 | -8.615850e-47 |
| Msa0059110 | Msa0881290 | 0.803361 | 3.616443e-49 | -8.615850e-47 |
| Msa0072420 | Msa0881290 | 0.812979 | 3.227150e-51 | -8.615850e-47 |
| Msa0074030 | Msa0881290 | 0.855918 | 4.568712e-62 | -8.615850e-47 |
| Msa0075170 | Msa0881290 | 0.826646 | 2.419635e-54 | -8.615850e-47 |
| Msa0076040 | Msa0881290 | 0.823789 | 1.146291e-53 | -8.615850e-47 |
| Msa0086750 | Msa0881290 | 0.893940 | 3.934750e-75 | -8.615850e-47 |
| Msa0090520 | Msa0881290 | 0.822745 | 2.009665e-53 | -8.615850e-47 |
| Msa0093850 | Msa0881290 | 0.809226 | 2.100736e-50 | -8.615850e-47 |
| Msa0094470 | Msa0881290 | 0.837770 | 4.273223e-57 | -8.615850e-47 |
| Msa0100740 | Msa0881290 | 0.840534 | 8.207340e-58 | -8.615850e-47 |
| Msa0105370 | Msa0881290 | 0.850931 | 1.233964e-60 | -8.615850e-47 |
| Msa0114870 | Msa0881290 | 0.853986 | 1.662153e-61 | -8.615850e-47 |
| Msa0116670 | Msa0881290 | 0.830490 | 2.852463e-55 | -8.615850e-47 |
| Msa0118710 | Msa0881290 | 0.807440 | 5.048760e-50 | -8.615850e-47 |
| Msa0603320 | Msa0881290 | 0.831851 | 1.320191e-55 | -8.615850e-47 |
| Msa0606580 | Msa0881290 | 0.824449 | 8.022130e-54 | -8.615850e-47 |
| Msa0608320 | Msa0881290 | 0.835413 | 1.702682e-56 | -8.615850e-47 |
| Msa0615440 | Msa0881290 | 0.814279 | 1.670286e-51 | -8.615850e-47 |
| Msa0615580 | Msa0881290 | 0.824192 | 9.219173e-54 | -8.615850e-47 |
| Msa0621950 | Msa0881290 | 0.824924 | 6.200182e-54 | -8.615850e-47 |
| Msa0626630 | Msa0881290 | 0.824546 | 7.611412e-54 | -8.615850e-47 |
| Msa0644350 | Msa0881290 | 0.816031 | 6.818300e-52 | -8.615850e-47 |
| Msa0647280 | Msa0881290 | 0.815613 | 8.451504e-52 | -8.615850e-47 |
| Msa0661300 | Msa0881290 | 0.865725 | 4.796153e-65 | -8.615850e-47 |
| Msa0664560 | Msa0881290 | 0.805299 | 1.427286e-49 | -8.615850e-47 |
| Msa0664750 | Msa0881290 | 0.821045 | 4.974285e-53 | -8.615850e-47 |
| Msa0666230 | Msa0881290 | 0.834666 | 2.626730e-56 | -8.615850e-47 |
| Msa0669520 | Msa0881290 | 0.864723 | 9.903121e-65 | -8.615850e-47 |
| Msa0686800 | Msa0881290 | 0.811468 | 6.896275e-51 | -8.615850e-47 |
| Msa0689260 | Msa0881290 | 0.823255 | 1.528041e-53 | -8.615850e-47 |
| Msa0698490 | Msa0881290 | 0.814389 | 1.579703e-51 | -8.615850e-47 |
| Msa0698660 | Msa0881290 | 0.808812 | 2.576818e-50 | -8.615850e-47 |
| Msa0698780 | Msa0881290 | 0.879869 | 8.757971e-70 | -8.615850e-47 |
| Msa0725440 | Msa0881290 | 0.843665 | 1.218616e-58 | -8.615850e-47 |
| Msa0729200 | Msa0881290 | 0.814579 | 1.433865e-51 | -8.615850e-47 |
| Msa0738100 | Msa0881290 | 0.835161 | 1.971244e-56 | -8.615850e-47 |
| Msa0769590 | Msa0881290 | 0.820796 | 5.676964e-53 | -8.615850e-47 |
| Msa0784200 | Msa0881290 | 0.841382 | 4.914737e-58 | -8.615850e-47 |
| Msa0785130 | Msa0881290 | 0.849103 | 4.007620e-60 | -8.615850e-47 |
| Msa0790400 | Msa0881290 | 0.836386 | 9.644464e-57 | -8.615850e-47 |
| Msa0792760 | Msa0881290 | 0.835960 | 1.238044e-56 | -8.615850e-47 |
| Msa0806880 | Msa0881290 | 0.832481 | 9.224362e-56 | -8.615850e-47 |
| Msa0808800 | Msa0881290 | 0.823943 | 1.054930e-53 | -8.615850e-47 |
| Msa0817540 | Msa0881290 | 0.875111 | 3.985680e-68 | -8.615850e-47 |
| Msa0818310 | Msa0881290 | 0.839696 | 1.357531e-57 | -8.615850e-47 |
| Msa0830090 | Msa0881290 | 0.850079 | 2.140574e-60 | -8.615850e-47 |
| Msa0835420 | Msa0881290 | 0.800429 | 1.447323e-48 | -8.615850e-47 |
| Msa0125450 | Msa0881290 | 0.816205 | 6.235313e-52 | -8.615850e-47 |
| Msa0125540 | Msa0881290 | 0.812757 | 3.611204e-51 | -8.615850e-47 |
| Msa0128860 | Msa0881290 | 0.864019 | 1.643323e-64 | -8.615850e-47 |
| Msa0133540 | Msa0881290 | 0.810332 | 1.214951e-50 | -8.615850e-47 |
| Msa0137990 | Msa0881290 | 0.826535 | 2.572443e-54 | -8.615850e-47 |
| Msa0140820 | Msa0881290 | 0.871426 | 6.897698e-67 | -8.615850e-47 |
| Msa0140850 | Msa0881290 | 0.859533 | 3.874035e-63 | -8.615850e-47 |
| Msa0146280 | Msa0881290 | 0.818180 | 2.242772e-52 | -8.615850e-47 |
| Msa0146340 | Msa0881290 | 0.830088 | 3.575783e-55 | -8.615850e-47 |
| Msa0148060 | Msa0881290 | 0.813872 | 2.053794e-51 | -8.615850e-47 |
| Msa0149200 | Msa0881290 | 0.806209 | 9.194291e-50 | -8.615850e-47 |
| Msa0150300 | Msa0881290 | 0.809826 | 1.561841e-50 | -8.615850e-47 |
| Msa0163760 | Msa0881290 | 0.832646 | 8.395038e-56 | -8.615850e-47 |
| Msa0167480 | Msa0881290 | 0.802217 | 6.228683e-49 | -8.615850e-47 |
| Msa0172900 | Msa0881290 | 0.827340 | 1.651605e-54 | -8.615850e-47 |
| Msa0173530 | Msa0881290 | 0.834665 | 2.628646e-56 | -8.615850e-47 |
| Msa0174730 | Msa0881290 | 0.865433 | 5.925270e-65 | -8.615850e-47 |
| Msa0179030 | Msa0881290 | 0.825605 | 4.280485e-54 | -8.615850e-47 |
| Msa0183090 | Msa0881290 | 0.823101 | 1.660540e-53 | -8.615850e-47 |
| Msa0183900 | Msa0881290 | 0.828253 | 9.964789e-55 | -8.615850e-47 |
| Msa0187930 | Msa0881290 | 0.819032 | 1.436578e-52 | -8.615850e-47 |
| Msa0188350 | Msa0881290 | 0.846820 | 1.708024e-59 | -8.615850e-47 |
| Msa0188690 | Msa0881290 | 0.840517 | 8.288708e-58 | -8.615850e-47 |
| Msa0189700 | Msa0881290 | 0.999659 | 0.000000e+00 | -8.615850e-47 |
| Msa0194540 | Msa0881290 | 0.813142 | 2.972952e-51 | -8.615850e-47 |
| Msa0199880 | Msa0881290 | 0.806200 | 9.232486e-50 | -8.615850e-47 |
| Msa0204960 | Msa0881290 | 0.806652 | 7.413704e-50 | -8.615850e-47 |
| Msa0218830 | Msa0881290 | 0.819501 | 1.123646e-52 | -8.615850e-47 |
| Msa0221030 | Msa0881290 | 0.821697 | 3.517043e-53 | -8.615850e-47 |
| Msa0223080 | Msa0881290 | 0.809483 | 1.850356e-50 | -8.615850e-47 |
| Msa0229760 | Msa0881290 | 0.818707 | 1.702835e-52 | -8.615850e-47 |
| Msa0230490 | Msa0881290 | 0.865350 | 6.293281e-65 | -8.615850e-47 |
| Msa0231100 | Msa0881290 | 0.844079 | 9.437996e-59 | -8.615850e-47 |
| Msa0231980 | Msa0881290 | 0.800617 | 1.324921e-48 | -8.615850e-47 |
| Msa0232010 | Msa0881290 | 0.997819 | 7.352182e-250 | -8.615850e-47 |
| Msa0232080 | Msa0881290 | 0.996997 | 2.616082e-235 | -8.615850e-47 |
| Msa0366890 | Msa0881290 | 0.811201 | 7.880782e-51 | -8.615850e-47 |
| Msa0369450 | Msa0881290 | 0.876915 | 9.550873e-69 | -8.615850e-47 |
| Msa0380300 | Msa0881290 | 0.844837 | 5.901417e-59 | -8.615850e-47 |
| Msa0387730 | Msa0881290 | 0.819064 | 1.413127e-52 | -8.615850e-47 |
| Msa0393370 | Msa0881290 | 0.807035 | 6.153255e-50 | -8.615850e-47 |
| Msa0395820 | Msa0881290 | 0.839329 | 1.691062e-57 | -8.615850e-47 |
| Msa0418270 | Msa0881290 | 0.825608 | 4.272460e-54 | -8.615850e-47 |
| Msa0423750 | Msa0881290 | 0.804886 | 1.741586e-49 | -8.615850e-47 |
| Msa0427150 | Msa0881290 | 0.802769 | 4.793946e-49 | -8.615850e-47 |
| Msa0443390 | Msa0881290 | 0.845953 | 2.943288e-59 | -8.615850e-47 |
| Msa0449210 | Msa0881290 | 0.811071 | 8.408011e-51 | -8.615850e-47 |
| Msa0462110 | Msa0881290 | 0.824944 | 6.134745e-54 | -8.615850e-47 |
| Msa0468330 | Msa0881290 | 0.812492 | 4.125766e-51 | -8.615850e-47 |
| Msa0482650 | Msa0881290 | 0.851174 | 1.053963e-60 | -8.615850e-47 |
| Msa0244780 | Msa0881290 | 0.822382 | 2.441030e-53 | -8.615850e-47 |
| Msa0249580 | Msa0881290 | 0.816164 | 6.367209e-52 | -8.615850e-47 |
| Msa0250820 | Msa0881290 | 0.857865 | 1.219806e-62 | -8.615850e-47 |
| Msa0250870 | Msa0881290 | 0.819536 | 1.103024e-52 | -8.615850e-47 |
| Msa0257450 | Msa0881290 | 0.838771 | 2.359631e-57 | -8.615850e-47 |
| Msa0258390 | Msa0881290 | 0.834107 | 3.628896e-56 | -8.615850e-47 |
| Msa0258850 | Msa0881290 | 0.809253 | 2.073488e-50 | -8.615850e-47 |
| Msa0261170 | Msa0881290 | 0.800089 | 1.697337e-48 | -8.615850e-47 |
| Msa0262480 | Msa0881290 | 0.820406 | 6.974197e-53 | -8.615850e-47 |
| Msa0264010 | Msa0881290 | 0.822584 | 2.190669e-53 | -8.615850e-47 |
| Msa0268130 | Msa0881290 | 0.815857 | 7.456264e-52 | -8.615850e-47 |
| Msa0270210 | Msa0881290 | 0.821053 | 4.954392e-53 | -8.615850e-47 |
| Msa0280610 | Msa0881290 | 0.824421 | 8.148328e-54 | -8.615850e-47 |
| Msa0281530 | Msa0881290 | 0.821966 | 3.048543e-53 | -8.615850e-47 |
| Msa0284180 | Msa0881290 | 0.800156 | 1.645108e-48 | -8.615850e-47 |
| Msa0289580 | Msa0881290 | 0.866207 | 3.376112e-65 | -8.615850e-47 |
| Msa0289610 | Msa0881290 | 0.861947 | 7.169097e-64 | -8.615850e-47 |
| Msa0296720 | Msa0881290 | 0.817438 | 3.297693e-52 | -8.615850e-47 |
| Msa0298200 | Msa0881290 | 0.801095 | 1.058257e-48 | -8.615850e-47 |
| Msa0298990 | Msa0881290 | 0.822450 | 2.353827e-53 | -8.615850e-47 |
| Msa0300350 | Msa0881290 | 0.811181 | 7.960485e-51 | -8.615850e-47 |
| Msa0302160 | Msa0881290 | 0.811079 | 8.376365e-51 | -8.615850e-47 |
| Msa0305780 | Msa0881290 | 0.824330 | 8.559146e-54 | -8.615850e-47 |
| Msa0307850 | Msa0881290 | 0.847701 | 9.787518e-60 | -8.615850e-47 |
| Msa0317910 | Msa0881290 | 0.840547 | 8.143251e-58 | -8.615850e-47 |
| Msa0326480 | Msa0881290 | 0.806331 | 8.665257e-50 | -8.615850e-47 |
| Msa0327300 | Msa0881290 | 0.859275 | 4.630715e-63 | -8.615850e-47 |
| Msa0327330 | Msa0881290 | 0.849788 | 2.581739e-60 | -8.615850e-47 |
| Msa0335730 | Msa0881290 | 0.836613 | 8.442978e-57 | -8.615850e-47 |
| Msa0336010 | Msa0881290 | 0.864834 | 9.142213e-65 | -8.615850e-47 |
| Msa0339490 | Msa0881290 | 0.808846 | 2.534029e-50 | -8.615850e-47 |
| Msa0339500 | Msa0881290 | 0.830654 | 2.600758e-55 | -8.615850e-47 |
| Msa0341690 | Msa0881290 | 0.815001 | 1.156130e-51 | -8.615850e-47 |
| Msa0348830 | Msa0881290 | 0.851693 | 7.517523e-61 | -8.615850e-47 |
| Msa0348990 | Msa0881290 | 0.819935 | 8.942306e-53 | -8.615850e-47 |
| Msa0357900 | Msa0881290 | 0.857115 | 2.033872e-62 | -8.615850e-47 |
| Msa0497490 | Msa0881290 | 0.826137 | 3.199773e-54 | -8.615850e-47 |
| Msa0518390 | Msa0881290 | 0.818565 | 1.834265e-52 | -8.615850e-47 |
| Msa0518450 | Msa0881290 | 0.800802 | 1.214913e-48 | -8.615850e-47 |
| Msa0521050 | Msa0881290 | 0.861755 | 8.206754e-64 | -8.615850e-47 |
| Msa0524500 | Msa0881290 | 0.831771 | 1.382215e-55 | -8.615850e-47 |
| Msa0526420 | Msa0881290 | 0.808015 | 3.812053e-50 | -8.615850e-47 |
| Msa0526540 | Msa0881290 | 0.844871 | 5.778094e-59 | -8.615850e-47 |
| Msa0527020 | Msa0881290 | 0.812997 | 3.198556e-51 | -8.615850e-47 |
| Msa0527150 | Msa0881290 | 0.823079 | 1.679653e-53 | -8.615850e-47 |
| Msa0531230 | Msa0881290 | 0.811552 | 6.611187e-51 | -8.615850e-47 |
| Msa0531650 | Msa0881290 | 0.870455 | 1.440851e-66 | -8.615850e-47 |
| Msa0534750 | Msa0881290 | 0.815202 | 1.042954e-51 | -8.615850e-47 |
| Msa0556060 | Msa0881290 | 0.812466 | 4.181044e-51 | -8.615850e-47 |
| Msa0571920 | Msa0881290 | 0.802895 | 4.515263e-49 | -8.615850e-47 |
| Msa0576940 | Msa0881290 | 0.827588 | 1.440102e-54 | -8.615850e-47 |
| Msa0578140 | Msa0881290 | 0.813519 | 2.457349e-51 | -8.615850e-47 |
| Msa0581110 | Msa0881290 | 0.896406 | 3.804328e-76 | -8.615850e-47 |
| Msa0581280 | Msa0881290 | 0.817195 | 3.739464e-52 | -8.615850e-47 |
| Msa0584260 | Msa0881290 | 0.808362 | 3.215486e-50 | -8.615850e-47 |
| Msa0588360 | Msa0881290 | 0.917300 | 6.277777e-86 | -8.615850e-47 |
| Msa0858770 | Msa0881290 | 0.849928 | 2.359544e-60 | -8.615850e-47 |
| Msa0867060 | Msa0881290 | 0.828118 | 1.073720e-54 | -8.615850e-47 |
| Msa0881290 | Msa0888810 | 0.819090 | 1.393683e-52 | -8.615850e-47 |
| Msa0881290 | Msa0902760 | 0.867199 | 1.631485e-65 | -8.615850e-47 |
| Msa0881290 | Msa0953310 | 0.890429 | 9.936980e-74 | -8.615850e-47 |
| Msa0881290 | Msa0958000 | 0.809366 | 1.960614e-50 | -8.615850e-47 |
| Msa0881290 | Msa0968590 | 0.817524 | 3.154401e-52 | -8.615850e-47 |
| Msa0881290 | Msa0989540 | 0.817623 | 2.995470e-52 | -8.615850e-47 |
| Msa0881290 | Msa1006840 | 0.884590 | 1.684469e-71 | -8.615850e-47 |
| Msa0881290 | Msa1012740 | 0.852826 | 3.577212e-61 | -8.615850e-47 |
| Msa0881290 | Msa1013400 | 0.865455 | 5.833107e-65 | -8.615850e-47 |
| Msa0881290 | Msa1019240 | 0.846832 | 1.694814e-59 | -8.615850e-47 |
| Msa0881290 | Msa1019260 | 0.864918 | 8.601923e-65 | -8.615850e-47 |
| Msa0881290 | Msa1021470 | 0.811750 | 5.989083e-51 | -8.615850e-47 |
| Msa0881290 | Msa1029070 | 0.814612 | 1.410132e-51 | -8.615850e-47 |
| Msa0881290 | Msa1043690 | 0.803680 | 3.106096e-49 | -8.615850e-47 |
| Msa0881290 | Msa1051880 | 0.817939 | 2.541813e-52 | -8.615850e-47 |
| Msa0881290 | Msa1072710 | 0.853963 | 1.687347e-61 | -8.615850e-47 |
| Msa0881290 | Msa1078170 | 0.807736 | 4.368626e-50 | -8.615850e-47 |
| Msa0881290 | Msa1078870 | 0.843303 | 1.522026e-58 | -8.615850e-47 |
| Msa0881290 | Msa1078980 | 0.811855 | 5.682319e-51 | -8.615850e-47 |
| Msa0881290 | Msa1081150 | 0.835399 | 1.716671e-56 | -8.615850e-47 |
| Msa0881290 | Msa1081930 | 0.867005 | 1.881748e-65 | -8.615850e-47 |
| Msa0881290 | Msa1085930 | 0.804216 | 2.402688e-49 | -8.615850e-47 |
| Msa0881290 | Msa1088490 | 0.806160 | 9.415879e-50 | -8.615850e-47 |
| Msa0881290 | Msa1093530 | 0.868410 | 6.668428e-66 | -8.615850e-47 |
| Msa0881290 | Msa1093840 | 0.801435 | 9.015523e-49 | -8.615850e-47 |
| Msa0881290 | Msa1101600 | 0.816909 | 4.336610e-52 | -8.615850e-47 |
| Msa0881290 | Msa1104140 | 0.861489 | 9.900177e-64 | -8.615850e-47 |
| Msa0881290 | Msa1104210 | 0.844912 | 5.635230e-59 | -8.615850e-47 |
| Msa0881290 | Msa1105460 | 0.827936 | 1.188104e-54 | -8.615850e-47 |
| Msa0881290 | Msa1120790 | 0.810490 | 1.123505e-50 | -8.615850e-47 |
| Msa0881290 | Msa1124070 | 0.802731 | 4.881946e-49 | -8.615850e-47 |
| Msa0881290 | Msa1126510 | 0.850187 | 1.996734e-60 | -8.615850e-47 |
| Msa0881290 | Msa1126830 | 0.893009 | 9.362196e-75 | -8.615850e-47 |
| Msa0881290 | Msa1127590 | 0.814784 | 1.291348e-51 | -8.615850e-47 |
| Msa0881290 | Msa1128600 | 0.835204 | 1.922803e-56 | -8.615850e-47 |
| Msa0881290 | Msa1135890 | 0.810490 | 1.123505e-50 | -8.615850e-47 |
| Msa0881290 | Msa1148910 | 0.856569 | 2.943850e-62 | -8.615850e-47 |
| Msa0881290 | Msa1156160 | 0.805579 | 1.247074e-49 | -8.615850e-47 |
| Msa0881290 | Msa1165780 | 0.849485 | 3.137863e-60 | -8.615850e-47 |
| Msa0881290 | Msa1165940 | 0.883311 | 4.994193e-71 | -8.615850e-47 |
| Msa0881290 | Msa1166860 | 0.840287 | 9.525304e-58 | -8.615850e-47 |
| Msa0881290 | Msa1166870 | 0.801818 | 7.525156e-49 | -8.615850e-47 |
| Msa0881290 | Msa1169180 | 0.808332 | 3.262472e-50 | -8.615850e-47 |
| Msa0881290 | Msa1174780 | 0.815684 | 8.151213e-52 | -8.615850e-47 |
| Msa0881290 | Msa1207270 | 0.830070 | 3.611185e-55 | -8.615850e-47 |
| Msa0881290 | Msa1208020 | 0.834778 | 2.462122e-56 | -8.615850e-47 |
| Msa0881290 | Msa1209200 | 0.820125 | 8.090355e-53 | -8.615850e-47 |
| Msa0881290 | Msa1213480 | 0.803893 | 2.805104e-49 | -8.615850e-47 |
| Msa0881290 | Msa1215820 | 0.879123 | 1.610468e-69 | -8.615850e-47 |
| Msa0881290 | Msa1216260 | 0.800387 | 1.475978e-48 | -8.615850e-47 |
| Msa0881290 | Msa1217210 | 0.803365 | 3.609143e-49 | -8.615850e-47 |
| Msa0881290 | Msa1218450 | 0.806669 | 7.350855e-50 | -8.615850e-47 |
| Msa0881290 | Msa1218600 | 0.864850 | 9.034820e-65 | -8.615850e-47 |
| Msa0881290 | Msa1225700 | 0.800973 | 1.120889e-48 | -8.615850e-47 |
| Msa0881290 | Msa1229320 | 0.814807 | 1.276495e-51 | -8.615850e-47 |
| Msa0881290 | Msa1230580 | 0.821068 | 4.912764e-53 | -8.615850e-47 |
| Msa0881290 | Msa1251160 | 0.861908 | 7.367484e-64 | -8.615850e-47 |
| Msa0881290 | Msa1257510 | 0.868529 | 6.102756e-66 | -8.615850e-47 |
| Msa0881290 | Msa1262890 | 0.821116 | 4.791641e-53 | -8.615850e-47 |
| Msa0881290 | Msa1264210 | 0.812806 | 3.522880e-51 | -8.615850e-47 |
| Msa0881290 | Msa1265630 | 0.832829 | 7.560165e-56 | -8.615850e-47 |
| Msa0881290 | Msa1266060 | 0.825645 | 4.187943e-54 | -8.615850e-47 |
| Msa0881290 | Msa1273340 | 0.806648 | 7.427335e-50 | -8.615850e-47 |
| Msa0881290 | Msa1299590 | 0.868120 | 8.268719e-66 | -8.615850e-47 |
| Msa0881290 | Msa1300380 | 0.805308 | 1.420992e-49 | -8.615850e-47 |
| Msa0881290 | Msa1305050 | 0.825428 | 4.713281e-54 | -8.615850e-47 |
| Msa0881290 | Msa1332250 | 0.842035 | 3.305830e-58 | -8.615850e-47 |
| Msa0881290 | Msa1332590 | 0.807706 | 4.433655e-50 | -8.615850e-47 |
| Msa0881290 | Msa1338190 | 0.890338 | 1.078535e-73 | -8.615850e-47 |
| Msa0881290 | Msa1343260 | 0.983218 | 3.808834e-157 | -8.615850e-47 |
| Msa0881290 | Msa1349570 | 0.800916 | 1.151175e-48 | -8.615850e-47 |
| Msa0881290 | Msa1358250 | 0.821941 | 3.089658e-53 | -8.615850e-47 |
| Msa0881290 | Msa1362790 | 0.805875 | 1.080779e-49 | -8.615850e-47 |
| Msa0881290 | Msa1363330 | 0.850437 | 1.699179e-60 | -8.615850e-47 |
| Msa0881290 | Msa1366180 | 0.818616 | 1.786633e-52 | -8.615850e-47 |
| Msa0881290 | Msa1366800 | 0.822529 | 2.256630e-53 | -8.615850e-47 |
| Msa0881290 | Msa1367590 | 0.807550 | 4.785587e-50 | -8.615850e-47 |
| Msa0881290 | Msa1369890 | 0.814461 | 1.523005e-51 | -8.615850e-47 |
| Msa0881290 | Msa1374060 | 0.824560 | 7.555976e-54 | -8.615850e-47 |
| Msa0881290 | Msa1374120 | 0.823260 | 1.523967e-53 | -8.615850e-47 |
| Msa0881290 | Msa1376650 | 0.822162 | 2.745080e-53 | -8.615850e-47 |
| Msa0881290 | Msa1379760 | 0.854642 | 1.074209e-61 | -8.615850e-47 |
| Msa0881290 | Msa1381350 | 0.832859 | 7.433185e-56 | -8.615850e-47 |
| Msa0881290 | Msa1382560 | 0.824686 | 7.056506e-54 | -8.615850e-47 |
| Msa0881290 | Msa1382620 | 0.811165 | 8.025829e-51 | -8.615850e-47 |
| Msa0881290 | Msa1386600 | 0.850781 | 1.360145e-60 | -8.615850e-47 |
| Msa0881290 | Msa1394290 | 0.838924 | 2.154094e-57 | -8.615850e-47 |
| Msa0881290 | Msa1399530 | 0.820718 | 5.916528e-53 | -8.615850e-47 |
| Msa0881290 | Msa1410440 | 0.811870 | 5.639425e-51 | -8.615850e-47 |
| Msa0881290 | Msa1411970 | 0.816270 | 6.028598e-52 | -8.615850e-47 |
| Msa0881290 | Msa1413260 | 0.814755 | 1.310575e-51 | -8.615850e-47 |
| Msa0881290 | Msa1413500 | 0.825263 | 5.156612e-54 | -8.615850e-47 |
| Msa0881290 | Msa1419870 | 0.805254 | 1.459012e-49 | -8.615850e-47 |
| Msa0881290 | Msa1421560 | 0.800746 | 1.246969e-48 | -8.615850e-47 |
| Msa0881290 | Msa1425670 | 0.802109 | 6.556609e-49 | -8.615850e-47 |
| Msa0881290 | Msa1426120 | 0.847521 | 1.097015e-59 | -8.615850e-47 |
| Msa0881290 | Msa1426370 | 0.804333 | 2.271465e-49 | -8.615850e-47 |
| Msa0881290 | Msa1426490 | 0.815723 | 7.989541e-52 | -8.615850e-47 |
| Msa0881290 | Msa1427560 | 0.811515 | 6.737369e-51 | -8.615850e-47 |
| Msa0881290 | Msa1432700 | 0.842860 | 1.998075e-58 | -8.615850e-47 |
| Msa0881290 | Msa1433310 | 0.831122 | 1.996362e-55 | -8.615850e-47 |
| Msa0881290 | Msa1434090 | 0.801057 | 1.077249e-48 | -8.615850e-47 |
| Msa0881290 | Msa1440880 | 0.833646 | 4.733474e-56 | -8.615850e-47 |
| Msa0881290 | Msa1443300 | 0.848447 | 6.093958e-60 | -8.615850e-47 |
| Msa0881290 | Msa1446810 | 0.829939 | 3.886777e-55 | -8.615850e-47 |
| Msa0881290 | Msa1446820 | 0.804739 | 1.869504e-49 | -8.615850e-47 |
| Msa0881290 | Msa1448690 | 0.824256 | 8.907343e-54 | -8.615850e-47 |
| Msa0881290 | Msa1450280 | 0.820816 | 5.616518e-53 | -8.615850e-47 |
| Msa0881290 | Msa1451160 | 0.826217 | 3.062830e-54 | -8.615850e-47 |
| Msa0881290 | Msa1456050 | 0.836599 | 8.513191e-57 | -8.615850e-47 |
| Msa0881290 | Msa1457920 | 0.829547 | 4.843413e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881290 | MtrunA17_Chr7g0263251 | 100.000 | 105 | 0 | 0 | 1 | 105 | 1 | 105 | 1.24e-71 | 208 |
| Msa0881290 | MtrunA17_Chr4g0050721 | 100.000 | 105 | 0 | 0 | 1 | 105 | 1 | 105 | 1.24e-71 | 208 |
| Msa0881290 | MtrunA17_Chr2g0278691 | 100.000 | 105 | 0 | 0 | 1 | 105 | 1 | 105 | 1.24e-71 | 208 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881290 | AT3G23390.1 | 92.381 | 105 | 8 | 0 | 1 | 105 | 1 | 105 | 1.05e-66 | 196 |
| Msa0881290 | AT4G14320.1 | 92.381 | 105 | 8 | 0 | 1 | 105 | 1 | 105 | 1.05e-66 | 196 |
| Msa0881290 | AT4G14320.2 | 91.398 | 93 | 8 | 0 | 1 | 93 | 1 | 93 | 3.44e-57 | 174 |
Find 58 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAACTAGTGTGGAATTT+AGG | 0.185779 | 6_1:-28327923 | Msa0881290:three_prime_UTR |
| TCTCTTCTAGGTGGAGAATT+AGG | 0.245518 | 6_1:-28328234 | Msa0881290:exon |
| ATCTTTACCCTTCTTGTATT+GGG | 0.247979 | 6_1:+28329113 | None:intergenic |
| CCATTGTTGTTGAAATGTTT+TGG | 0.281419 | 6_1:-28328186 | Msa0881290:three_prime_UTR |
| TATCTTTACCCTTCTTGTAT+TGG | 0.312780 | 6_1:+28329112 | None:intergenic |
| CACATATGTTTGTAGGGAAA+TGG | 0.350911 | 6_1:-28327822 | Msa0881290:three_prime_UTR |
| TTGGGGAAATCAAGGTGATT+GGG | 0.367665 | 6_1:-28327786 | Msa0881290:three_prime_UTR |
| AAATGGTTTGTGTGTATTGT+TGG | 0.370801 | 6_1:-28327805 | Msa0881290:three_prime_UTR |
| CAAGGGAACTTCTCTCTTCT+AGG | 0.380957 | 6_1:-28328246 | Msa0881290:exon |
| TGTTGAACACATATGTTTGT+AGG | 0.381230 | 6_1:-28327829 | Msa0881290:three_prime_UTR |
| GATCGCAAACAGTCTGGTTA+TGG | 0.387570 | 6_1:-28329060 | Msa0881290:CDS |
| AATGGTTTGTGTGTATTGTT+GGG | 0.389029 | 6_1:-28327804 | Msa0881290:three_prime_UTR |
| AAAATCATCAAAGGAATTCA+AGG | 0.412835 | 6_1:+28328074 | None:intergenic |
| TGTTCTGAGGTTGCAATGCC+AGG | 0.414173 | 6_1:-28328457 | Msa0881290:CDS |
| CATGGTGACGGCGCGTGGAT+TGG | 0.425073 | 6_1:+28329289 | None:intergenic |
| GTTGGGGAAATCAAGGTGAT+TGG | 0.436724 | 6_1:-28327787 | Msa0881290:three_prime_UTR |
| GCATTCCTTGCTCTTGCAGT+AGG | 0.441918 | 6_1:+28329161 | None:intergenic |
| TTTAAGTTTCTGTGTTAATG+TGG | 0.446453 | 6_1:-28327900 | Msa0881290:three_prime_UTR |
| TGAGATTGGTGGTGATAAGA+AGG | 0.451732 | 6_1:-28328270 | Msa0881290:CDS |
| GGGAAAGTCGGTGATTGAAT+TGG | 0.463252 | 6_1:-28327878 | Msa0881290:three_prime_UTR |
| CGTTACGATCGCAAACAGTC+TGG | 0.464861 | 6_1:-28329066 | Msa0881290:CDS |
| TTAAGTTTCTGTGTTAATGT+GGG | 0.465340 | 6_1:-28327899 | Msa0881290:three_prime_UTR |
| TGTTTCTCAACATGCAATCA+AGG | 0.468902 | 6_1:-28328424 | Msa0881290:intron |
| GTTGAACACATATGTTTGTA+GGG | 0.469153 | 6_1:-28327828 | Msa0881290:three_prime_UTR |
| TGGGGAAATCAAGGTGATTG+GGG | 0.489090 | 6_1:-28327785 | Msa0881290:three_prime_UTR |
| TCATTTCCTCTAGTTTGTGT+TGG | 0.490345 | 6_1:-28327986 | Msa0881290:three_prime_UTR |
| GTTACCTTCTTGTGAAAGAC+GGG | 0.495280 | 6_1:+28329024 | None:intergenic |
| GAGAAACATGCTTGCAACCC+TGG | 0.514679 | 6_1:+28328439 | None:intergenic |
| GAGATTGGTGGTGATAAGAA+GGG | 0.526133 | 6_1:-28328269 | Msa0881290:CDS |
| GTGTATTGTTGGGGAAATCA+AGG | 0.538232 | 6_1:-28327794 | Msa0881290:three_prime_UTR |
| CAAGGTTACCCAATACAAGA+AGG | 0.553515 | 6_1:-28329121 | Msa0881290:CDS |
| CGCAAACAGTCTGGTTATGG+TGG | 0.554816 | 6_1:-28329057 | Msa0881290:CDS |
| TGGTGGTGATAAGAAGGGCA+AGG | 0.556388 | 6_1:-28328264 | Msa0881290:CDS |
| CCAAAACATTTCAACAACAA+TGG | 0.558543 | 6_1:+28328186 | None:intergenic |
| TAAGTTTCTGTGTTAATGTG+GGG | 0.560887 | 6_1:-28327898 | Msa0881290:three_prime_UTR |
| TTTCAATTTACCGAACATTG+TGG | 0.561609 | 6_1:+28327940 | None:intergenic |
| GTTACCGTCTCCACAATGTT+CGG | 0.561933 | 6_1:-28327950 | Msa0881290:three_prime_UTR |
| ATTACCATGGTGACGGCGCG+TGG | 0.569167 | 6_1:+28329284 | None:intergenic |
| AAAGATAGCATCGCCGCTCA+AGG | 0.571046 | 6_1:-28329096 | Msa0881290:CDS |
| AGTTACCTTCTTGTGAAAGA+CGG | 0.572609 | 6_1:+28329023 | None:intergenic |
| CAAGAAGCATACACTTCACA+AGG | 0.596444 | 6_1:-28329139 | Msa0881290:CDS |
| TGTGTTAATGTGGGGAAAGT+CGG | 0.596962 | 6_1:-28327890 | Msa0881290:three_prime_UTR |
| AAAATGGAGCGATGAAGCAA+TGG | 0.600572 | 6_1:+28329342 | None:intergenic |
| TTTACCGAACATTGTGGAGA+CGG | 0.600929 | 6_1:+28327946 | None:intergenic |
| GAAAACCTACTGCAAGAGCA+AGG | 0.601503 | 6_1:-28329166 | Msa0881290:CDS |
| CAATCCACGCGCCGTCACCA+TGG | 0.602128 | 6_1:-28329288 | Msa0881290:intron |
| CCACTAAGAAAATTGTTCTG+AGG | 0.602363 | 6_1:-28328470 | Msa0881290:CDS |
| TAAGCCCGTCTTTCACAAGA+AGG | 0.606865 | 6_1:-28329028 | Msa0881290:intron |
| ATGGTTTGTGTGTATTGTTG+GGG | 0.618518 | 6_1:-28327803 | Msa0881290:three_prime_UTR |
| TCGGTAAATTGAAACTAGTG+TGG | 0.628118 | 6_1:-28327931 | Msa0881290:three_prime_UTR |
| AAGGTTACCCAATACAAGAA+GGG | 0.630634 | 6_1:-28329120 | Msa0881290:CDS |
| GGTGGTGATAAGAAGGGCAA+GGG | 0.630826 | 6_1:-28328263 | Msa0881290:CDS |
| GTAACGACGCTTACCTTGAG+CGG | 0.638526 | 6_1:+28329083 | None:intergenic |
| GTTCTGAGGTTGCAATGCCA+GGG | 0.641034 | 6_1:-28328456 | Msa0881290:CDS |
| GGAGATGATTACCATGGTGA+CGG | 0.643982 | 6_1:+28329277 | None:intergenic |
| GGGAACTTCTCTCTTCTAGG+TGG | 0.678633 | 6_1:-28328243 | Msa0881290:exon |
| TTAACACCAACACAAACTAG+AGG | 0.679173 | 6_1:+28327980 | None:intergenic |
| GCGCGTGGATTGGATCTGAG+AGG | 0.710537 | 6_1:+28329299 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAATCTTTTATCATT+TGG | - | chr6_1:28329091-28329110 | Msa0881290:CDS | 10.0% |
| !!! | TTAAAAATCTTTTATCATTT+GGG | - | chr6_1:28329092-28329111 | Msa0881290:CDS | 10.0% |
| !!! | TTTAAAAATCTTTTATCATT+TGG | - | chr6_1:28329091-28329110 | Msa0881290:CDS | 10.0% |
| !!! | TTAAAAATCTTTTATCATTT+GGG | - | chr6_1:28329092-28329111 | Msa0881290:CDS | 10.0% |
| !!! | TGATTTTTTTTTTAGTTGAA+TGG | - | chr6_1:28328602-28328621 | Msa0881290:intron | 15.0% |
| !!! | ATTTAATTTTTGTTTGTGTT+TGG | - | chr6_1:28328632-28328651 | Msa0881290:intron | 15.0% |
| !!! | AAGATTTTTAAAATCATCAA+AGG | + | chr6_1:28329083-28329102 | None:intergenic | 15.0% |
| !!! | ATCTAATTTTATCATAACAA+TGG | + | chr6_1:28329133-28329152 | None:intergenic | 15.0% |
| !!! | TGATTTTTTTTTTAGTTGAA+TGG | - | chr6_1:28328602-28328621 | Msa0881290:intron | 15.0% |
| !!! | ATTTAATTTTTGTTTGTGTT+TGG | - | chr6_1:28328632-28328651 | Msa0881290:intron | 15.0% |
| !!! | AAGATTTTTAAAATCATCAA+AGG | + | chr6_1:28329083-28329102 | None:intergenic | 15.0% |
| !!! | ATCTAATTTTATCATAACAA+TGG | + | chr6_1:28329133-28329152 | None:intergenic | 15.0% |
| !! | AAATGTATAAAAGTAATGAG+GGG | + | chr6_1:28328159-28328178 | None:intergenic | 20.0% |
| !! | GAAATGTATAAAAGTAATGA+GGG | + | chr6_1:28328160-28328179 | None:intergenic | 20.0% |
| !! | TGAAATGTATAAAAGTAATG+AGG | + | chr6_1:28328161-28328180 | None:intergenic | 20.0% |
| !! | CTTACAATCAACTAAAAAAA+TGG | + | chr6_1:28328203-28328222 | None:intergenic | 20.0% |
| !! | GAATGCAAAAAATTCAAATT+TGG | - | chr6_1:28328526-28328545 | Msa0881290:intron | 20.0% |
| !!! | CAGAAATTTTATTTTGTAGA+TGG | - | chr6_1:28328784-28328803 | Msa0881290:intron | 20.0% |
| !!! | TTTTATTTTGTAGATGGATA+TGG | - | chr6_1:28328790-28328809 | Msa0881290:intron | 20.0% |
| !! | AAATGTATAAAAGTAATGAG+GGG | + | chr6_1:28328159-28328178 | None:intergenic | 20.0% |
| !! | GAAATGTATAAAAGTAATGA+GGG | + | chr6_1:28328160-28328179 | None:intergenic | 20.0% |
| !! | TGAAATGTATAAAAGTAATG+AGG | + | chr6_1:28328161-28328180 | None:intergenic | 20.0% |
| !! | CTTACAATCAACTAAAAAAA+TGG | + | chr6_1:28328203-28328222 | None:intergenic | 20.0% |
| !! | GAATGCAAAAAATTCAAATT+TGG | - | chr6_1:28328526-28328545 | Msa0881290:intron | 20.0% |
| !!! | CAGAAATTTTATTTTGTAGA+TGG | - | chr6_1:28328784-28328803 | Msa0881290:intron | 20.0% |
| !!! | TTTTATTTTGTAGATGGATA+TGG | - | chr6_1:28328790-28328809 | Msa0881290:intron | 20.0% |
| ! | TGATATAATTACGATTACGT+AGG | + | chr6_1:28327906-28327925 | None:intergenic | 25.0% |
| ! | GAAAATCCAACATCAAAAAA+GGG | + | chr6_1:28327937-28327956 | None:intergenic | 25.0% |
| ! | TGAAAATCCAACATCAAAAA+AGG | + | chr6_1:28327938-28327957 | None:intergenic | 25.0% |
| !!! | TTTTTTGATGTTGGATTTTC+AGG | - | chr6_1:28327937-28327956 | Msa0881290:three_prime_UTR | 25.0% |
| ! | AATGTATAAAAGTAATGAGG+GGG | + | chr6_1:28328158-28328177 | None:intergenic | 25.0% |
| !!! | TTAGCTTTATGCAAATGATT+AGG | - | chr6_1:28328283-28328302 | Msa0881290:CDS | 25.0% |
| !!! | TAGCTTTATGCAAATGATTA+GGG | - | chr6_1:28328284-28328303 | Msa0881290:CDS | 25.0% |
| ! | TGGATTCAAATATGGTTAAT+AGG | - | chr6_1:28328327-28328346 | Msa0881290:intron | 25.0% |
| !!! | TGTGTTTGGTTTTATTGTAT+AGG | - | chr6_1:28328646-28328665 | Msa0881290:intron | 25.0% |
| ! | ATATGGTTGTTTGTATCTAA+TGG | - | chr6_1:28328807-28328826 | Msa0881290:intron | 25.0% |
| ! | AAAATCATCAAAGGAATTCA+AGG | + | chr6_1:28329074-28329093 | None:intergenic | 25.0% |
| !! | TTTAAGTTTCTGTGTTAATG+TGG | - | chr6_1:28329245-28329264 | Msa0881290:intron | 25.0% |
| ! | TTAAGTTTCTGTGTTAATGT+GGG | - | chr6_1:28329246-28329265 | Msa0881290:intron | 25.0% |
| ! | TGATATAATTACGATTACGT+AGG | + | chr6_1:28327906-28327925 | None:intergenic | 25.0% |
| ! | GAAAATCCAACATCAAAAAA+GGG | + | chr6_1:28327937-28327956 | None:intergenic | 25.0% |
| ! | TGAAAATCCAACATCAAAAA+AGG | + | chr6_1:28327938-28327957 | None:intergenic | 25.0% |
| !!! | TTTTTTGATGTTGGATTTTC+AGG | - | chr6_1:28327937-28327956 | Msa0881290:three_prime_UTR | 25.0% |
| ! | AATGTATAAAAGTAATGAGG+GGG | + | chr6_1:28328158-28328177 | None:intergenic | 25.0% |
| !!! | TTAGCTTTATGCAAATGATT+AGG | - | chr6_1:28328283-28328302 | Msa0881290:CDS | 25.0% |
| !!! | TAGCTTTATGCAAATGATTA+GGG | - | chr6_1:28328284-28328303 | Msa0881290:CDS | 25.0% |
| ! | TGGATTCAAATATGGTTAAT+AGG | - | chr6_1:28328327-28328346 | Msa0881290:intron | 25.0% |
| !!! | TGTGTTTGGTTTTATTGTAT+AGG | - | chr6_1:28328646-28328665 | Msa0881290:intron | 25.0% |
| ! | ATATGGTTGTTTGTATCTAA+TGG | - | chr6_1:28328807-28328826 | Msa0881290:intron | 25.0% |
| ! | AAAATCATCAAAGGAATTCA+AGG | + | chr6_1:28329074-28329093 | None:intergenic | 25.0% |
| !! | TTTAAGTTTCTGTGTTAATG+TGG | - | chr6_1:28329245-28329264 | Msa0881290:intron | 25.0% |
| ! | TTAAGTTTCTGTGTTAATGT+GGG | - | chr6_1:28329246-28329265 | Msa0881290:intron | 25.0% |
| !! | AAGCAATGGTTTGTGTTTTA+TGG | + | chr6_1:28327792-28327811 | None:intergenic | 30.0% |
| ATCTTTACCCTTCTTGTATT+GGG | + | chr6_1:28328035-28328054 | None:intergenic | 30.0% | |
| TATCTTTACCCTTCTTGTAT+TGG | + | chr6_1:28328036-28328055 | None:intergenic | 30.0% | |
| GGTTAATAGGAAGAACATTA+TGG | - | chr6_1:28328340-28328359 | Msa0881290:intron | 30.0% | |
| ! | TTTTGAGCTGAATGTGAAAT+TGG | - | chr6_1:28328439-28328458 | Msa0881290:CDS | 30.0% |
| CCAAAACATTTCAACAACAA+TGG | + | chr6_1:28328962-28328981 | None:intergenic | 30.0% | |
| !! | CCATTGTTGTTGAAATGTTT+TGG | - | chr6_1:28328959-28328978 | Msa0881290:intron | 30.0% |
| !!! | TGAAATGTTTTGGTTCTCTA+TGG | - | chr6_1:28328969-28328988 | Msa0881290:intron | 30.0% |
| TTTCAATTTACCGAACATTG+TGG | + | chr6_1:28329208-28329227 | None:intergenic | 30.0% | |
| TTGAAACTAGTGTGGAATTT+AGG | - | chr6_1:28329222-28329241 | Msa0881290:intron | 30.0% | |
| TAAGTTTCTGTGTTAATGTG+GGG | - | chr6_1:28329247-28329266 | Msa0881290:intron | 30.0% | |
| TGTTGAACACATATGTTTGT+AGG | - | chr6_1:28329316-28329335 | Msa0881290:five_prime_UTR | 30.0% | |
| GTTGAACACATATGTTTGTA+GGG | - | chr6_1:28329317-28329336 | Msa0881290:five_prime_UTR | 30.0% | |
| ! | AAATGGTTTGTGTGTATTGT+TGG | - | chr6_1:28329340-28329359 | Msa0881290:five_prime_UTR | 30.0% |
| ! | AATGGTTTGTGTGTATTGTT+GGG | - | chr6_1:28329341-28329360 | Msa0881290:five_prime_UTR | 30.0% |
| !! | AAGCAATGGTTTGTGTTTTA+TGG | + | chr6_1:28327792-28327811 | None:intergenic | 30.0% |
| ATCTTTACCCTTCTTGTATT+GGG | + | chr6_1:28328035-28328054 | None:intergenic | 30.0% | |
| TATCTTTACCCTTCTTGTAT+TGG | + | chr6_1:28328036-28328055 | None:intergenic | 30.0% | |
| GGTTAATAGGAAGAACATTA+TGG | - | chr6_1:28328340-28328359 | Msa0881290:intron | 30.0% | |
| ! | TTTTGAGCTGAATGTGAAAT+TGG | - | chr6_1:28328439-28328458 | Msa0881290:CDS | 30.0% |
| CCAAAACATTTCAACAACAA+TGG | + | chr6_1:28328962-28328981 | None:intergenic | 30.0% | |
| !! | CCATTGTTGTTGAAATGTTT+TGG | - | chr6_1:28328959-28328978 | Msa0881290:intron | 30.0% |
| !!! | TGAAATGTTTTGGTTCTCTA+TGG | - | chr6_1:28328969-28328988 | Msa0881290:intron | 30.0% |
| TTTCAATTTACCGAACATTG+TGG | + | chr6_1:28329208-28329227 | None:intergenic | 30.0% | |
| TTGAAACTAGTGTGGAATTT+AGG | - | chr6_1:28329222-28329241 | Msa0881290:intron | 30.0% | |
| TAAGTTTCTGTGTTAATGTG+GGG | - | chr6_1:28329247-28329266 | Msa0881290:intron | 30.0% | |
| TGTTGAACACATATGTTTGT+AGG | - | chr6_1:28329316-28329335 | Msa0881290:five_prime_UTR | 30.0% | |
| GTTGAACACATATGTTTGTA+GGG | - | chr6_1:28329317-28329336 | Msa0881290:five_prime_UTR | 30.0% | |
| ! | AAATGGTTTGTGTGTATTGT+TGG | - | chr6_1:28329340-28329359 | Msa0881290:five_prime_UTR | 30.0% |
| ! | AATGGTTTGTGTGTATTGTT+GGG | - | chr6_1:28329341-28329360 | Msa0881290:five_prime_UTR | 30.0% |
| !!! | GCTAAACCCTTTTTTGATGT+TGG | - | chr6_1:28327928-28327947 | Msa0881290:three_prime_UTR | 35.0% |
| ! | CAGTAGGTTTTCTTTGTCTT+TGG | + | chr6_1:28327971-28327990 | None:intergenic | 35.0% |
| AAGGTTACCCAATACAAGAA+GGG | - | chr6_1:28328025-28328044 | Msa0881290:three_prime_UTR | 35.0% | |
| AGTTACCTTCTTGTGAAAGA+CGG | + | chr6_1:28328125-28328144 | None:intergenic | 35.0% | |
| AGGGAAGATTTAGAGATTGA+TGG | - | chr6_1:28328303-28328322 | Msa0881290:intron | 35.0% | |
| ! | AAGATTTAGAGATTGATGGC+TGG | - | chr6_1:28328307-28328326 | Msa0881290:intron | 35.0% |
| ! | TTGATGGCTGGATTCAAATA+TGG | - | chr6_1:28328319-28328338 | Msa0881290:intron | 35.0% |
| ! | CTTATATCACTAAGTGGGTT+TGG | + | chr6_1:28328385-28328404 | None:intergenic | 35.0% |
| CAAACCCACTTAGTGATATA+AGG | - | chr6_1:28328383-28328402 | Msa0881290:intron | 35.0% | |
| ! | CAAGCCTTATATCACTAAGT+GGG | + | chr6_1:28328390-28328409 | None:intergenic | 35.0% |
| ! | CCTCAGAACAATTTTCTTAG+TGG | + | chr6_1:28328678-28328697 | None:intergenic | 35.0% |
| CCACTAAGAAAATTGTTCTG+AGG | - | chr6_1:28328675-28328694 | Msa0881290:intron | 35.0% | |
| TGTTTCTCAACATGCAATCA+AGG | - | chr6_1:28328721-28328740 | Msa0881290:intron | 35.0% | |
| ! | TCATTTCCTCTAGTTTGTGT+TGG | - | chr6_1:28329159-28329178 | Msa0881290:CDS | 35.0% |
| TTAACACCAACACAAACTAG+AGG | + | chr6_1:28329168-28329187 | None:intergenic | 35.0% | |
| TCGGTAAATTGAAACTAGTG+TGG | - | chr6_1:28329214-28329233 | Msa0881290:intron | 35.0% | |
| CACATATGTTTGTAGGGAAA+TGG | - | chr6_1:28329323-28329342 | Msa0881290:five_prime_UTR | 35.0% | |
| ! | ATGGTTTGTGTGTATTGTTG+GGG | - | chr6_1:28329342-28329361 | Msa0881290:five_prime_UTR | 35.0% |
| !!! | GCTAAACCCTTTTTTGATGT+TGG | - | chr6_1:28327928-28327947 | Msa0881290:three_prime_UTR | 35.0% |
| ! | CAGTAGGTTTTCTTTGTCTT+TGG | + | chr6_1:28327971-28327990 | None:intergenic | 35.0% |
| AAGGTTACCCAATACAAGAA+GGG | - | chr6_1:28328025-28328044 | Msa0881290:three_prime_UTR | 35.0% | |
| AGTTACCTTCTTGTGAAAGA+CGG | + | chr6_1:28328125-28328144 | None:intergenic | 35.0% | |
| AGGGAAGATTTAGAGATTGA+TGG | - | chr6_1:28328303-28328322 | Msa0881290:intron | 35.0% | |
| ! | AAGATTTAGAGATTGATGGC+TGG | - | chr6_1:28328307-28328326 | Msa0881290:intron | 35.0% |
| ! | TTGATGGCTGGATTCAAATA+TGG | - | chr6_1:28328319-28328338 | Msa0881290:intron | 35.0% |
| ! | CTTATATCACTAAGTGGGTT+TGG | + | chr6_1:28328385-28328404 | None:intergenic | 35.0% |
| CAAACCCACTTAGTGATATA+AGG | - | chr6_1:28328383-28328402 | Msa0881290:intron | 35.0% | |
| ! | CAAGCCTTATATCACTAAGT+GGG | + | chr6_1:28328390-28328409 | None:intergenic | 35.0% |
| ! | CCTCAGAACAATTTTCTTAG+TGG | + | chr6_1:28328678-28328697 | None:intergenic | 35.0% |
| CCACTAAGAAAATTGTTCTG+AGG | - | chr6_1:28328675-28328694 | Msa0881290:intron | 35.0% | |
| TGTTTCTCAACATGCAATCA+AGG | - | chr6_1:28328721-28328740 | Msa0881290:intron | 35.0% | |
| ! | TCATTTCCTCTAGTTTGTGT+TGG | - | chr6_1:28329159-28329178 | Msa0881290:CDS | 35.0% |
| TTAACACCAACACAAACTAG+AGG | + | chr6_1:28329168-28329187 | None:intergenic | 35.0% | |
| TCGGTAAATTGAAACTAGTG+TGG | - | chr6_1:28329214-28329233 | Msa0881290:intron | 35.0% | |
| CACATATGTTTGTAGGGAAA+TGG | - | chr6_1:28329323-28329342 | Msa0881290:five_prime_UTR | 35.0% | |
| ! | ATGGTTTGTGTGTATTGTTG+GGG | - | chr6_1:28329342-28329361 | Msa0881290:five_prime_UTR | 35.0% |
| AAAATGGAGCGATGAAGCAA+TGG | + | chr6_1:28327806-28327825 | None:intergenic | 40.0% | |
| !! | AGTTTTGTGCGCAGTGAAAA+TGG | + | chr6_1:28327822-28327841 | None:intergenic | 40.0% |
| ! | CAAGAAGCATACACTTCACA+AGG | - | chr6_1:28328006-28328025 | Msa0881290:three_prime_UTR | 40.0% |
| CAAGGTTACCCAATACAAGA+AGG | - | chr6_1:28328024-28328043 | Msa0881290:three_prime_UTR | 40.0% | |
| GTTACCTTCTTGTGAAAGAC+GGG | + | chr6_1:28328124-28328143 | None:intergenic | 40.0% | |
| ! | CCAAGCCTTATATCACTAAG+TGG | + | chr6_1:28328391-28328410 | None:intergenic | 40.0% |
| CCACTTAGTGATATAAGGCT+TGG | - | chr6_1:28328388-28328407 | Msa0881290:intron | 40.0% | |
| ! | GTTGTGTTTCTGTTATGCAG+AGG | - | chr6_1:28328841-28328860 | Msa0881290:intron | 40.0% |
| !!! | AGGTGCAAGCATTTTGAGAT+TGG | - | chr6_1:28328861-28328880 | Msa0881290:intron | 40.0% |
| !!! | TGCAAGCATTTTGAGATTGG+TGG | - | chr6_1:28328864-28328883 | Msa0881290:intron | 40.0% |
| !! | TGAGATTGGTGGTGATAAGA+AGG | - | chr6_1:28328875-28328894 | Msa0881290:intron | 40.0% |
| !! | GAGATTGGTGGTGATAAGAA+GGG | - | chr6_1:28328876-28328895 | Msa0881290:intron | 40.0% |
| TCTCTTCTAGGTGGAGAATT+AGG | - | chr6_1:28328911-28328930 | Msa0881290:intron | 40.0% | |
| TTTACCGAACATTGTGGAGA+CGG | + | chr6_1:28329202-28329221 | None:intergenic | 40.0% | |
| TGTGTTAATGTGGGGAAAGT+CGG | - | chr6_1:28329255-28329274 | Msa0881290:intron | 40.0% | |
| GTGTATTGTTGGGGAAATCA+AGG | - | chr6_1:28329351-28329370 | Msa0881290:five_prime_UTR | 40.0% | |
| TTGGGGAAATCAAGGTGATT+GGG | - | chr6_1:28329359-28329378 | Msa0881290:five_prime_UTR | 40.0% | |
| AAAATGGAGCGATGAAGCAA+TGG | + | chr6_1:28327806-28327825 | None:intergenic | 40.0% | |
| !! | AGTTTTGTGCGCAGTGAAAA+TGG | + | chr6_1:28327822-28327841 | None:intergenic | 40.0% |
| ! | CAAGAAGCATACACTTCACA+AGG | - | chr6_1:28328006-28328025 | Msa0881290:three_prime_UTR | 40.0% |
| CAAGGTTACCCAATACAAGA+AGG | - | chr6_1:28328024-28328043 | Msa0881290:three_prime_UTR | 40.0% | |
| GTTACCTTCTTGTGAAAGAC+GGG | + | chr6_1:28328124-28328143 | None:intergenic | 40.0% | |
| ! | CCAAGCCTTATATCACTAAG+TGG | + | chr6_1:28328391-28328410 | None:intergenic | 40.0% |
| CCACTTAGTGATATAAGGCT+TGG | - | chr6_1:28328388-28328407 | Msa0881290:intron | 40.0% | |
| ! | GTTGTGTTTCTGTTATGCAG+AGG | - | chr6_1:28328841-28328860 | Msa0881290:intron | 40.0% |
| !!! | AGGTGCAAGCATTTTGAGAT+TGG | - | chr6_1:28328861-28328880 | Msa0881290:intron | 40.0% |
| !!! | TGCAAGCATTTTGAGATTGG+TGG | - | chr6_1:28328864-28328883 | Msa0881290:intron | 40.0% |
| !! | TGAGATTGGTGGTGATAAGA+AGG | - | chr6_1:28328875-28328894 | Msa0881290:intron | 40.0% |
| !! | GAGATTGGTGGTGATAAGAA+GGG | - | chr6_1:28328876-28328895 | Msa0881290:intron | 40.0% |
| TCTCTTCTAGGTGGAGAATT+AGG | - | chr6_1:28328911-28328930 | Msa0881290:intron | 40.0% | |
| TTTACCGAACATTGTGGAGA+CGG | + | chr6_1:28329202-28329221 | None:intergenic | 40.0% | |
| TGTGTTAATGTGGGGAAAGT+CGG | - | chr6_1:28329255-28329274 | Msa0881290:intron | 40.0% | |
| GTGTATTGTTGGGGAAATCA+AGG | - | chr6_1:28329351-28329370 | Msa0881290:five_prime_UTR | 40.0% | |
| TTGGGGAAATCAAGGTGATT+GGG | - | chr6_1:28329359-28329378 | Msa0881290:five_prime_UTR | 40.0% | |
| GGAGATGATTACCATGGTGA+CGG | + | chr6_1:28327871-28327890 | None:intergenic | 45.0% | |
| CGATTACGTAGGAACAGACA+CGG | + | chr6_1:28327895-28327914 | None:intergenic | 45.0% | |
| GAAAACCTACTGCAAGAGCA+AGG | - | chr6_1:28327979-28327998 | Msa0881290:three_prime_UTR | 45.0% | |
| GATCGCAAACAGTCTGGTTA+TGG | - | chr6_1:28328085-28328104 | Msa0881290:three_prime_UTR | 45.0% | |
| TAAGCCCGTCTTTCACAAGA+AGG | - | chr6_1:28328117-28328136 | Msa0881290:three_prime_UTR | 45.0% | |
| AAGTAATGAGGGGGTGAAGT+GGG | + | chr6_1:28328149-28328168 | None:intergenic | 45.0% | |
| AAAGTAATGAGGGGGTGAAG+TGG | + | chr6_1:28328150-28328169 | None:intergenic | 45.0% | |
| CAAGGGAACTTCTCTCTTCT+AGG | - | chr6_1:28328899-28328918 | Msa0881290:intron | 45.0% | |
| GTTACCGTCTCCACAATGTT+CGG | - | chr6_1:28329195-28329214 | Msa0881290:intron | 45.0% | |
| GGGAAAGTCGGTGATTGAAT+TGG | - | chr6_1:28329267-28329286 | Msa0881290:intron | 45.0% | |
| GTTGGGGAAATCAAGGTGAT+TGG | - | chr6_1:28329358-28329377 | Msa0881290:five_prime_UTR | 45.0% | |
| TGGGGAAATCAAGGTGATTG+GGG | - | chr6_1:28329360-28329379 | Msa0881290:five_prime_UTR | 45.0% | |
| GGAGATGATTACCATGGTGA+CGG | + | chr6_1:28327871-28327890 | None:intergenic | 45.0% | |
| CGATTACGTAGGAACAGACA+CGG | + | chr6_1:28327895-28327914 | None:intergenic | 45.0% | |
| GAAAACCTACTGCAAGAGCA+AGG | - | chr6_1:28327979-28327998 | Msa0881290:three_prime_UTR | 45.0% | |
| GATCGCAAACAGTCTGGTTA+TGG | - | chr6_1:28328085-28328104 | Msa0881290:three_prime_UTR | 45.0% | |
| TAAGCCCGTCTTTCACAAGA+AGG | - | chr6_1:28328117-28328136 | Msa0881290:three_prime_UTR | 45.0% | |
| AAGTAATGAGGGGGTGAAGT+GGG | + | chr6_1:28328149-28328168 | None:intergenic | 45.0% | |
| AAAGTAATGAGGGGGTGAAG+TGG | + | chr6_1:28328150-28328169 | None:intergenic | 45.0% | |
| CAAGGGAACTTCTCTCTTCT+AGG | - | chr6_1:28328899-28328918 | Msa0881290:intron | 45.0% | |
| GTTACCGTCTCCACAATGTT+CGG | - | chr6_1:28329195-28329214 | Msa0881290:intron | 45.0% | |
| GGGAAAGTCGGTGATTGAAT+TGG | - | chr6_1:28329267-28329286 | Msa0881290:intron | 45.0% | |
| GTTGGGGAAATCAAGGTGAT+TGG | - | chr6_1:28329358-28329377 | Msa0881290:five_prime_UTR | 45.0% | |
| CACGGTGGAGATGATTACCA+TGG | + | chr6_1:28327877-28327896 | None:intergenic | 50.0% | |
| TTACGTAGGAACAGACACGG+TGG | + | chr6_1:28327892-28327911 | None:intergenic | 50.0% | |
| GCATTCCTTGCTCTTGCAGT+AGG | + | chr6_1:28327987-28328006 | None:intergenic | 50.0% | |
| AAAGATAGCATCGCCGCTCA+AGG | - | chr6_1:28328049-28328068 | Msa0881290:three_prime_UTR | 50.0% | |
| GTAACGACGCTTACCTTGAG+CGG | + | chr6_1:28328065-28328084 | None:intergenic | 50.0% | |
| CGTTACGATCGCAAACAGTC+TGG | - | chr6_1:28328079-28328098 | Msa0881290:three_prime_UTR | 50.0% | |
| CGCAAACAGTCTGGTTATGG+TGG | - | chr6_1:28328088-28328107 | Msa0881290:three_prime_UTR | 50.0% | |
| !! | TGTTCTGAGGTTGCAATGCC+AGG | - | chr6_1:28328688-28328707 | Msa0881290:intron | 50.0% |
| !! | GTTCTGAGGTTGCAATGCCA+GGG | - | chr6_1:28328689-28328708 | Msa0881290:intron | 50.0% |
| GAGAAACATGCTTGCAACCC+TGG | + | chr6_1:28328709-28328728 | None:intergenic | 50.0% | |
| ! | TGGTGGTGATAAGAAGGGCA+AGG | - | chr6_1:28328881-28328900 | Msa0881290:intron | 50.0% |
| GGTGGTGATAAGAAGGGCAA+GGG | - | chr6_1:28328882-28328901 | Msa0881290:intron | 50.0% | |
| GGGAACTTCTCTCTTCTAGG+TGG | - | chr6_1:28328902-28328921 | Msa0881290:intron | 50.0% | |
| CACGGTGGAGATGATTACCA+TGG | + | chr6_1:28327877-28327896 | None:intergenic | 50.0% | |
| TTACGTAGGAACAGACACGG+TGG | + | chr6_1:28327892-28327911 | None:intergenic | 50.0% | |
| GCATTCCTTGCTCTTGCAGT+AGG | + | chr6_1:28327987-28328006 | None:intergenic | 50.0% | |
| AAAGATAGCATCGCCGCTCA+AGG | - | chr6_1:28328049-28328068 | Msa0881290:three_prime_UTR | 50.0% | |
| GTAACGACGCTTACCTTGAG+CGG | + | chr6_1:28328065-28328084 | None:intergenic | 50.0% | |
| CGTTACGATCGCAAACAGTC+TGG | - | chr6_1:28328079-28328098 | Msa0881290:three_prime_UTR | 50.0% | |
| CGCAAACAGTCTGGTTATGG+TGG | - | chr6_1:28328088-28328107 | Msa0881290:three_prime_UTR | 50.0% | |
| !! | TGTTCTGAGGTTGCAATGCC+AGG | - | chr6_1:28328688-28328707 | Msa0881290:intron | 50.0% |
| !! | GTTCTGAGGTTGCAATGCCA+GGG | - | chr6_1:28328689-28328708 | Msa0881290:intron | 50.0% |
| GAGAAACATGCTTGCAACCC+TGG | + | chr6_1:28328709-28328728 | None:intergenic | 50.0% | |
| ! | TGGTGGTGATAAGAAGGGCA+AGG | - | chr6_1:28328881-28328900 | Msa0881290:intron | 50.0% |
| GGTGGTGATAAGAAGGGCAA+GGG | - | chr6_1:28328882-28328901 | Msa0881290:intron | 50.0% | |
| GGGAACTTCTCTCTTCTAGG+TGG | - | chr6_1:28328902-28328921 | Msa0881290:intron | 50.0% | |
| !! | GCGCGTGGATTGGATCTGAG+AGG | + | chr6_1:28327849-28327868 | None:intergenic | 60.0% |
| !! | ATTACCATGGTGACGGCGCG+TGG | + | chr6_1:28327864-28327883 | None:intergenic | 60.0% |
| !! | GCGCGTGGATTGGATCTGAG+AGG | + | chr6_1:28327849-28327868 | None:intergenic | 60.0% |
| !! | ATTACCATGGTGACGGCGCG+TGG | + | chr6_1:28327864-28327883 | None:intergenic | 60.0% |
| !! | CATGGTGACGGCGCGTGGAT+TGG | + | chr6_1:28327859-28327878 | None:intergenic | 65.0% |
| CAATCCACGCGCCGTCACCA+TGG | - | chr6_1:28327857-28327876 | Msa0881290:three_prime_UTR | 65.0% | |
| !! | CATGGTGACGGCGCGTGGAT+TGG | + | chr6_1:28327859-28327878 | None:intergenic | 65.0% |
| CAATCCACGCGCCGTCACCA+TGG | - | chr6_1:28327857-28327876 | Msa0881290:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 28327785 | 28329382 | 28327785 | ID=Msa0881290;Name=Msa0881290 |
| chr6_1 | mRNA | 28327785 | 28329382 | 28327785 | ID=Msa0881290-mRNA-1;Parent=Msa0881290;Name=Msa0881290-mRNA-1;_AED=0.05;_eAED=0.05;_QI=91|1|1|1|0.66|0.75|4|462|105 |
| chr6_1 | exon | 28327785 | 28328306 | 28327785 | ID=Msa0881290-mRNA-1:exon:7134;Parent=Msa0881290-mRNA-1 |
| chr6_1 | exon | 28328425 | 28328499 | 28328425 | ID=Msa0881290-mRNA-1:exon:7133;Parent=Msa0881290-mRNA-1 |
| chr6_1 | exon | 28329029 | 28329208 | 28329029 | ID=Msa0881290-mRNA-1:exon:7132;Parent=Msa0881290-mRNA-1 |
| chr6_1 | exon | 28329289 | 28329382 | 28329289 | ID=Msa0881290-mRNA-1:exon:7131;Parent=Msa0881290-mRNA-1 |
| chr6_1 | five_prime_UTR | 28329292 | 28329382 | 28329292 | ID=Msa0881290-mRNA-1:five_prime_utr;Parent=Msa0881290-mRNA-1 |
| chr6_1 | CDS | 28329289 | 28329291 | 28329289 | ID=Msa0881290-mRNA-1:cds;Parent=Msa0881290-mRNA-1 |
| chr6_1 | CDS | 28329029 | 28329208 | 28329029 | ID=Msa0881290-mRNA-1:cds;Parent=Msa0881290-mRNA-1 |
| chr6_1 | CDS | 28328425 | 28328499 | 28328425 | ID=Msa0881290-mRNA-1:cds;Parent=Msa0881290-mRNA-1 |
| chr6_1 | CDS | 28328247 | 28328306 | 28328247 | ID=Msa0881290-mRNA-1:cds;Parent=Msa0881290-mRNA-1 |
| chr6_1 | three_prime_UTR | 28327785 | 28328246 | 28327785 | ID=Msa0881290-mRNA-1:three_prime_utr;Parent=Msa0881290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
