Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1338190 | GAU48477.1 | 99.091 | 110 | 1 | 0 | 1 | 110 | 1 | 110 | 1.08e-69 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1338190 | sp|Q9M352|RL362_ARATH | 80.000 | 110 | 22 | 0 | 1 | 110 | 1 | 110 | 2.07e-56 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1338190 | A0A2Z6PQF7 | 99.091 | 110 | 1 | 0 | 1 | 110 | 1 | 110 | 5.17e-70 | 214 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1338190 | 0.878733 | 2.211038e-69 | -8.615850e-47 |
| Msa0002790 | Msa1338190 | 0.867102 | 1.752340e-65 | -8.615850e-47 |
| Msa0003780 | Msa1338190 | 0.837361 | 5.438428e-57 | -8.615850e-47 |
| Msa0022970 | Msa1338190 | 0.812831 | 3.478417e-51 | -8.615850e-47 |
| Msa0027260 | Msa1338190 | 0.817200 | 3.730620e-52 | -8.615850e-47 |
| Msa0032260 | Msa1338190 | 0.806419 | 8.300802e-50 | -8.615850e-47 |
| Msa0032780 | Msa1338190 | 0.847103 | 1.428834e-59 | -8.615850e-47 |
| Msa0032810 | Msa1338190 | 0.807054 | 6.096870e-50 | -8.615850e-47 |
| Msa0037250 | Msa1338190 | 0.802467 | 5.534021e-49 | -8.615850e-47 |
| Msa0042280 | Msa1338190 | 0.811430 | 7.027831e-51 | -8.615850e-47 |
| Msa0045730 | Msa1338190 | 0.830776 | 2.427832e-55 | -8.615850e-47 |
| Msa0047160 | Msa1338190 | 0.803933 | 2.751753e-49 | -8.615850e-47 |
| Msa0048180 | Msa1338190 | 0.841361 | 4.977829e-58 | -8.615850e-47 |
| Msa0049690 | Msa1338190 | 0.825312 | 5.020487e-54 | -8.615850e-47 |
| Msa0056430 | Msa1338190 | 0.807423 | 5.092425e-50 | -8.615850e-47 |
| Msa0056470 | Msa1338190 | 0.848928 | 4.482612e-60 | -8.615850e-47 |
| Msa0074030 | Msa1338190 | 0.860490 | 1.992038e-63 | -8.615850e-47 |
| Msa0076040 | Msa1338190 | 0.841757 | 3.916189e-58 | -8.615850e-47 |
| Msa0085780 | Msa1338190 | 0.851553 | 8.235065e-61 | -8.615850e-47 |
| Msa0086750 | Msa1338190 | 0.865324 | 6.415048e-65 | -8.615850e-47 |
| Msa0094470 | Msa1338190 | 0.810056 | 1.393473e-50 | -8.615850e-47 |
| Msa0097580 | Msa1338190 | 0.813089 | 3.053463e-51 | -8.615850e-47 |
| Msa0100730 | Msa1338190 | 0.808199 | 3.483391e-50 | -8.615850e-47 |
| Msa0116130 | Msa1338190 | 0.840184 | 1.013254e-57 | -8.615850e-47 |
| Msa0116670 | Msa1338190 | 0.867991 | 9.094190e-66 | -8.615850e-47 |
| Msa0118710 | Msa1338190 | 0.803229 | 3.851811e-49 | -8.615850e-47 |
| Msa0602920 | Msa1338190 | 0.811583 | 6.511925e-51 | -8.615850e-47 |
| Msa0603320 | Msa1338190 | 0.832825 | 7.578298e-56 | -8.615850e-47 |
| Msa0615580 | Msa1338190 | 0.828308 | 9.661698e-55 | -8.615850e-47 |
| Msa0615990 | Msa1338190 | 0.812434 | 4.247640e-51 | -8.615850e-47 |
| Msa0622750 | Msa1338190 | 0.844942 | 5.530378e-59 | -8.615850e-47 |
| Msa0623200 | Msa1338190 | 0.835869 | 1.305362e-56 | -8.615850e-47 |
| Msa0625570 | Msa1338190 | 0.815755 | 7.856390e-52 | -8.615850e-47 |
| Msa0631250 | Msa1338190 | 0.824512 | 7.753008e-54 | -8.615850e-47 |
| Msa0643980 | Msa1338190 | 0.811983 | 5.327755e-51 | -8.615850e-47 |
| Msa0661300 | Msa1338190 | 0.851357 | 9.357625e-61 | -8.615850e-47 |
| Msa0666230 | Msa1338190 | 0.835946 | 1.248102e-56 | -8.615850e-47 |
| Msa0698780 | Msa1338190 | 0.875038 | 4.221106e-68 | -8.615850e-47 |
| Msa0705800 | Msa1338190 | 0.810843 | 9.420250e-51 | -8.615850e-47 |
| Msa0712610 | Msa1338190 | 0.853938 | 1.715782e-61 | -8.615850e-47 |
| Msa0729200 | Msa1338190 | 0.855849 | 4.786794e-62 | -8.615850e-47 |
| Msa0738100 | Msa1338190 | 0.805925 | 1.054743e-49 | -8.615850e-47 |
| Msa0752910 | Msa1338190 | 0.807400 | 5.149114e-50 | -8.615850e-47 |
| Msa0766080 | Msa1338190 | 0.807356 | 5.261134e-50 | -8.615850e-47 |
| Msa0769590 | Msa1338190 | 0.855797 | 4.956031e-62 | -8.615850e-47 |
| Msa0781080 | Msa1338190 | 0.828135 | 1.064013e-54 | -8.615850e-47 |
| Msa0784200 | Msa1338190 | 0.807100 | 5.961052e-50 | -8.615850e-47 |
| Msa0785130 | Msa1338190 | 0.873731 | 1.171785e-67 | -8.615850e-47 |
| Msa0792420 | Msa1338190 | 0.875426 | 3.110947e-68 | -8.615850e-47 |
| Msa0797880 | Msa1338190 | 0.810690 | 1.016954e-50 | -8.615850e-47 |
| Msa0806880 | Msa1338190 | 0.857263 | 1.838416e-62 | -8.615850e-47 |
| Msa0808800 | Msa1338190 | 0.831068 | 2.058447e-55 | -8.615850e-47 |
| Msa0817540 | Msa1338190 | 0.858040 | 1.081915e-62 | -8.615850e-47 |
| Msa0830090 | Msa1338190 | 0.810920 | 9.066334e-51 | -8.615850e-47 |
| Msa0835420 | Msa1338190 | 0.820084 | 8.267579e-53 | -8.615850e-47 |
| Msa0128860 | Msa1338190 | 0.851484 | 8.610249e-61 | -8.615850e-47 |
| Msa0133540 | Msa1338190 | 0.839514 | 1.514384e-57 | -8.615850e-47 |
| Msa0140820 | Msa1338190 | 0.805706 | 1.172758e-49 | -8.615850e-47 |
| Msa0140850 | Msa1338190 | 0.846234 | 2.468681e-59 | -8.615850e-47 |
| Msa0146340 | Msa1338190 | 0.866411 | 2.908758e-65 | -8.615850e-47 |
| Msa0149190 | Msa1338190 | 0.802749 | 4.840085e-49 | -8.615850e-47 |
| Msa0149200 | Msa1338190 | 0.833967 | 3.933530e-56 | -8.615850e-47 |
| Msa0167480 | Msa1338190 | 0.819692 | 1.016102e-52 | -8.615850e-47 |
| Msa0172900 | Msa1338190 | 0.827367 | 1.626540e-54 | -8.615850e-47 |
| Msa0173530 | Msa1338190 | 0.867611 | 1.204666e-65 | -8.615850e-47 |
| Msa0174730 | Msa1338190 | 0.850060 | 2.166806e-60 | -8.615850e-47 |
| Msa0174770 | Msa1338190 | 0.803187 | 3.928863e-49 | -8.615850e-47 |
| Msa0179030 | Msa1338190 | 0.810755 | 9.845064e-51 | -8.615850e-47 |
| Msa0181490 | Msa1338190 | 0.835526 | 1.593952e-56 | -8.615850e-47 |
| Msa0181610 | Msa1338190 | 0.837745 | 4.335412e-57 | -8.615850e-47 |
| Msa0183090 | Msa1338190 | 0.829278 | 5.629971e-55 | -8.615850e-47 |
| Msa0187930 | Msa1338190 | 0.847176 | 1.364885e-59 | -8.615850e-47 |
| Msa0189700 | Msa1338190 | 0.890442 | 9.813318e-74 | -8.615850e-47 |
| Msa0194540 | Msa1338190 | 0.837553 | 4.856771e-57 | -8.615850e-47 |
| Msa0199880 | Msa1338190 | 0.804949 | 1.690035e-49 | -8.615850e-47 |
| Msa0210330 | Msa1338190 | 0.821720 | 3.474364e-53 | -8.615850e-47 |
| Msa0210360 | Msa1338190 | 0.849774 | 2.604854e-60 | -8.615850e-47 |
| Msa0218720 | Msa1338190 | 0.806788 | 6.939120e-50 | -8.615850e-47 |
| Msa0218830 | Msa1338190 | 0.853866 | 1.799450e-61 | -8.615850e-47 |
| Msa0219120 | Msa1338190 | 0.841297 | 5.175376e-58 | -8.615850e-47 |
| Msa0221030 | Msa1338190 | 0.852599 | 4.152093e-61 | -8.615850e-47 |
| Msa0222730 | Msa1338190 | 0.812149 | 4.901186e-51 | -8.615850e-47 |
| Msa0229150 | Msa1338190 | 0.800711 | 1.267802e-48 | -8.615850e-47 |
| Msa0230490 | Msa1338190 | 0.875708 | 2.490151e-68 | -8.615850e-47 |
| Msa0231100 | Msa1338190 | 0.805929 | 1.052815e-49 | -8.615850e-47 |
| Msa0232010 | Msa1338190 | 0.886391 | 3.563832e-72 | -8.615850e-47 |
| Msa0232080 | Msa1338190 | 0.886815 | 2.462009e-72 | -8.615850e-47 |
| Msa1227690 | Msa1338190 | 0.804889 | 1.739476e-49 | -8.615850e-47 |
| Msa1230580 | Msa1338190 | 0.811401 | 7.133320e-51 | -8.615850e-47 |
| Msa1241190 | Msa1338190 | 0.819383 | 1.195705e-52 | -8.615850e-47 |
| Msa1251160 | Msa1338190 | 0.801788 | 7.632541e-49 | -8.615850e-47 |
| Msa1256840 | Msa1338190 | 0.870489 | 1.404299e-66 | -8.615850e-47 |
| Msa1257510 | Msa1338190 | 0.881433 | 2.409607e-70 | -8.615850e-47 |
| Msa1265630 | Msa1338190 | 0.807753 | 4.332583e-50 | -8.615850e-47 |
| Msa1266060 | Msa1338190 | 0.842676 | 2.235550e-58 | -8.615850e-47 |
| Msa1273340 | Msa1338190 | 0.830618 | 2.653272e-55 | -8.615850e-47 |
| Msa1295150 | Msa1338190 | 0.818736 | 1.677246e-52 | -8.615850e-47 |
| Msa1295170 | Msa1338190 | 0.808906 | 2.459686e-50 | -8.615850e-47 |
| Msa1299590 | Msa1338190 | 0.830773 | 2.431285e-55 | -8.615850e-47 |
| Msa1305050 | Msa1338190 | 0.823833 | 1.119214e-53 | -8.615850e-47 |
| Msa1311400 | Msa1338190 | 0.842410 | 2.629693e-58 | -8.615850e-47 |
| Msa1321790 | Msa1338190 | 0.876870 | 9.894774e-69 | -8.615850e-47 |
| Msa1331250 | Msa1338190 | 0.812504 | 4.100504e-51 | -8.615850e-47 |
| Msa1332250 | Msa1338190 | 0.869344 | 3.322267e-66 | -8.615850e-47 |
| Msa1338190 | Msa1343260 | 0.914813 | 1.233464e-84 | -8.615850e-47 |
| Msa1338190 | Msa1349570 | 0.847096 | 1.435664e-59 | -8.615850e-47 |
| Msa1338190 | Msa1356790 | 0.856120 | 3.988612e-62 | -8.615850e-47 |
| Msa1338190 | Msa1362210 | 0.839978 | 1.146237e-57 | -8.615850e-47 |
| Msa1338190 | Msa1362790 | 0.880404 | 5.642688e-70 | -8.615850e-47 |
| Msa1338190 | Msa1363330 | 0.854974 | 8.610603e-62 | -8.615850e-47 |
| Msa1338190 | Msa1364480 | 0.808172 | 3.528881e-50 | -8.615850e-47 |
| Msa1338190 | Msa1366180 | 0.831462 | 1.646710e-55 | -8.615850e-47 |
| Msa1338190 | Msa1368920 | 0.807317 | 5.362360e-50 | -8.615850e-47 |
| Msa1338190 | Msa1369190 | 0.876606 | 1.221676e-68 | -8.615850e-47 |
| Msa1338190 | Msa1374120 | 0.807147 | 5.826090e-50 | -8.615850e-47 |
| Msa1338190 | Msa1379760 | 0.850116 | 2.090746e-60 | -8.615850e-47 |
| Msa1338190 | Msa1386600 | 0.854147 | 1.493415e-61 | -8.615850e-47 |
| Msa1338190 | Msa1392590 | 0.816340 | 5.817325e-52 | -8.615850e-47 |
| Msa1338190 | Msa1397100 | 0.813593 | 2.366583e-51 | -8.615850e-47 |
| Msa1338190 | Msa1399530 | 0.815252 | 1.017070e-51 | -8.615850e-47 |
| Msa1338190 | Msa1407070 | 0.823896 | 1.081811e-53 | -8.615850e-47 |
| Msa1338190 | Msa1410440 | 0.838855 | 2.243990e-57 | -8.615850e-47 |
| Msa1338190 | Msa1413260 | 0.860520 | 1.950483e-63 | -8.615850e-47 |
| Msa1338190 | Msa1413500 | 0.856569 | 2.943850e-62 | -8.615850e-47 |
| Msa1338190 | Msa1418770 | 0.862858 | 3.762967e-64 | -8.615850e-47 |
| Msa1338190 | Msa1425670 | 0.858486 | 7.970189e-63 | -8.615850e-47 |
| Msa1338190 | Msa1426120 | 0.868146 | 8.108202e-66 | -8.615850e-47 |
| Msa1338190 | Msa1426370 | 0.815911 | 7.250928e-52 | -8.615850e-47 |
| Msa1338190 | Msa1426490 | 0.852147 | 5.585069e-61 | -8.615850e-47 |
| Msa1338190 | Msa1427560 | 0.824277 | 8.807747e-54 | -8.615850e-47 |
| Msa1338190 | Msa1432700 | 0.802129 | 6.494935e-49 | -8.615850e-47 |
| Msa1338190 | Msa1433310 | 0.838766 | 2.366718e-57 | -8.615850e-47 |
| Msa1338190 | Msa1437280 | 0.831109 | 2.010633e-55 | -8.615850e-47 |
| Msa1338190 | Msa1448690 | 0.850433 | 1.703915e-60 | -8.615850e-47 |
| Msa1338190 | Msa1450280 | 0.850994 | 1.184635e-60 | -8.615850e-47 |
| Msa1338190 | Msa1456050 | 0.878379 | 2.944875e-69 | -8.615850e-47 |
| Msa1338190 | Msa1462860 | 0.837982 | 3.768233e-57 | -8.615850e-47 |
| Msa0369450 | Msa1338190 | 0.855098 | 7.920699e-62 | -8.615850e-47 |
| Msa0390030 | Msa1338190 | 0.807735 | 4.371370e-50 | -8.615850e-47 |
| Msa0423750 | Msa1338190 | 0.831550 | 1.566414e-55 | -8.615850e-47 |
| Msa0427150 | Msa1338190 | 0.849805 | 2.554683e-60 | -8.615850e-47 |
| Msa0432210 | Msa1338190 | 0.814282 | 1.668148e-51 | -8.615850e-47 |
| Msa0443390 | Msa1338190 | 0.871925 | 4.713902e-67 | -8.615850e-47 |
| Msa0462110 | Msa1338190 | 0.800802 | 1.214825e-48 | -8.615850e-47 |
| Msa0471880 | Msa1338190 | 0.807680 | 4.491492e-50 | -8.615850e-47 |
| Msa0481850 | Msa1338190 | 0.850373 | 1.771203e-60 | -8.615850e-47 |
| Msa0482650 | Msa1338190 | 0.801117 | 1.047642e-48 | -8.615850e-47 |
| Msa1006840 | Msa1338190 | 0.837601 | 4.722215e-57 | -8.615850e-47 |
| Msa1010310 | Msa1338190 | 0.813437 | 2.561331e-51 | -8.615850e-47 |
| Msa1013400 | Msa1338190 | 0.801132 | 1.039902e-48 | -8.615850e-47 |
| Msa1019240 | Msa1338190 | 0.867620 | 1.196853e-65 | -8.615850e-47 |
| Msa1019260 | Msa1338190 | 0.875909 | 2.123409e-68 | -8.615850e-47 |
| Msa1021120 | Msa1338190 | 0.812177 | 4.833449e-51 | -8.615850e-47 |
| Msa1037290 | Msa1338190 | 0.810704 | 1.009963e-50 | -8.615850e-47 |
| Msa1039520 | Msa1338190 | 0.841327 | 5.081465e-58 | -8.615850e-47 |
| Msa1042780 | Msa1338190 | 0.836800 | 7.565086e-57 | -8.615850e-47 |
| Msa1043690 | Msa1338190 | 0.810346 | 1.206617e-50 | -8.615850e-47 |
| Msa1072710 | Msa1338190 | 0.833522 | 5.080401e-56 | -8.615850e-47 |
| Msa1078870 | Msa1338190 | 0.869069 | 4.079410e-66 | -8.615850e-47 |
| Msa1078980 | Msa1338190 | 0.819636 | 1.046834e-52 | -8.615850e-47 |
| Msa1080350 | Msa1338190 | 0.876571 | 1.256454e-68 | -8.615850e-47 |
| Msa1081150 | Msa1338190 | 0.848325 | 6.587858e-60 | -8.615850e-47 |
| Msa1085470 | Msa1338190 | 0.825128 | 5.548317e-54 | -8.615850e-47 |
| Msa1088490 | Msa1338190 | 0.833776 | 4.392063e-56 | -8.615850e-47 |
| Msa1094380 | Msa1338190 | 0.817288 | 3.564093e-52 | -8.615850e-47 |
| Msa1104140 | Msa1338190 | 0.855307 | 6.886615e-62 | -8.615850e-47 |
| Msa1104210 | Msa1338190 | 0.862267 | 5.719372e-64 | -8.615850e-47 |
| Msa0244780 | Msa1338190 | 0.852518 | 4.378978e-61 | -8.615850e-47 |
| Msa0250820 | Msa1338190 | 0.878276 | 3.200509e-69 | -8.615850e-47 |
| Msa0250870 | Msa1338190 | 0.824219 | 9.088216e-54 | -8.615850e-47 |
| Msa0257450 | Msa1338190 | 0.877425 | 6.351856e-69 | -8.615850e-47 |
| Msa0258850 | Msa1338190 | 0.849038 | 4.179187e-60 | -8.615850e-47 |
| Msa0262480 | Msa1338190 | 0.813610 | 2.345537e-51 | -8.615850e-47 |
| Msa0264010 | Msa1338190 | 0.858261 | 9.303308e-63 | -8.615850e-47 |
| Msa0268130 | Msa1338190 | 0.842448 | 2.570242e-58 | -8.615850e-47 |
| Msa0280610 | Msa1338190 | 0.815276 | 1.004642e-51 | -8.615850e-47 |
| Msa0289580 | Msa1338190 | 0.842985 | 1.850699e-58 | -8.615850e-47 |
| Msa0289610 | Msa1338190 | 0.843798 | 1.122389e-58 | -8.615850e-47 |
| Msa0296720 | Msa1338190 | 0.835374 | 1.741805e-56 | -8.615850e-47 |
| Msa0297830 | Msa1338190 | 0.821898 | 3.161129e-53 | -8.615850e-47 |
| Msa0298200 | Msa1338190 | 0.845324 | 4.361393e-59 | -8.615850e-47 |
| Msa0298990 | Msa1338190 | 0.849274 | 3.592490e-60 | -8.615850e-47 |
| Msa0300350 | Msa1338190 | 0.826827 | 2.190579e-54 | -8.615850e-47 |
| Msa0306690 | Msa1338190 | 0.824924 | 6.200182e-54 | -8.615850e-47 |
| Msa0317910 | Msa1338190 | 0.832379 | 9.777855e-56 | -8.615850e-47 |
| Msa0327300 | Msa1338190 | 0.860965 | 1.429658e-63 | -8.615850e-47 |
| Msa0327330 | Msa1338190 | 0.872785 | 2.435564e-67 | -8.615850e-47 |
| Msa0335840 | Msa1338190 | 0.828185 | 1.034687e-54 | -8.615850e-47 |
| Msa0336010 | Msa1338190 | 0.859989 | 2.823655e-63 | -8.615850e-47 |
| Msa0337670 | Msa1338190 | 0.831473 | 1.636162e-55 | -8.615850e-47 |
| Msa0348830 | Msa1338190 | 0.889864 | 1.652466e-73 | -8.615850e-47 |
| Msa0348990 | Msa1338190 | 0.808379 | 3.187760e-50 | -8.615850e-47 |
| Msa1125860 | Msa1338190 | 0.874106 | 8.750896e-68 | -8.615850e-47 |
| Msa1126060 | Msa1338190 | 0.867887 | 9.825617e-66 | -8.615850e-47 |
| Msa1126470 | Msa1338190 | 0.815013 | 1.149127e-51 | -8.615850e-47 |
| Msa1126510 | Msa1338190 | 0.862775 | 3.989449e-64 | -8.615850e-47 |
| Msa1126770 | Msa1338190 | 0.818458 | 1.940066e-52 | -8.615850e-47 |
| Msa1126830 | Msa1338190 | 0.849224 | 3.708978e-60 | -8.615850e-47 |
| Msa1165780 | Msa1338190 | 0.824666 | 7.133223e-54 | -8.615850e-47 |
| Msa1165940 | Msa1338190 | 0.840585 | 7.955852e-58 | -8.615850e-47 |
| Msa1166860 | Msa1338190 | 0.867675 | 1.149230e-65 | -8.615850e-47 |
| Msa1166870 | Msa1338190 | 0.838524 | 2.733161e-57 | -8.615850e-47 |
| Msa1167540 | Msa1338190 | 0.803770 | 2.974343e-49 | -8.615850e-47 |
| Msa1169180 | Msa1338190 | 0.819549 | 1.095750e-52 | -8.615850e-47 |
| Msa1208020 | Msa1338190 | 0.863477 | 2.420990e-64 | -8.615850e-47 |
| Msa1215820 | Msa1338190 | 0.877880 | 4.404975e-69 | -8.615850e-47 |
| Msa1218600 | Msa1338190 | 0.811995 | 5.297541e-51 | -8.615850e-47 |
| Msa0483110 | Msa1338190 | 0.860875 | 1.521965e-63 | -8.615850e-47 |
| Msa0488820 | Msa1338190 | 0.804851 | 1.771124e-49 | -8.615850e-47 |
| Msa0521050 | Msa1338190 | 0.859922 | 2.957073e-63 | -8.615850e-47 |
| Msa0526540 | Msa1338190 | 0.854801 | 9.662728e-62 | -8.615850e-47 |
| Msa0527150 | Msa1338190 | 0.832740 | 7.953944e-56 | -8.615850e-47 |
| Msa0531650 | Msa1338190 | 0.841472 | 4.654340e-58 | -8.615850e-47 |
| Msa0534750 | Msa1338190 | 0.830621 | 2.649507e-55 | -8.615850e-47 |
| Msa0547940 | Msa1338190 | 0.803415 | 3.524207e-49 | -8.615850e-47 |
| Msa0571920 | Msa1338190 | 0.814448 | 1.532805e-51 | -8.615850e-47 |
| Msa0573350 | Msa1338190 | 0.845196 | 4.720986e-59 | -8.615850e-47 |
| Msa0576940 | Msa1338190 | 0.849564 | 2.981981e-60 | -8.615850e-47 |
| Msa0581070 | Msa1338190 | 0.821285 | 4.379000e-53 | -8.615850e-47 |
| Msa0581110 | Msa1338190 | 0.846743 | 1.792974e-59 | -8.615850e-47 |
| Msa0584030 | Msa1338190 | 0.836040 | 1.181093e-56 | -8.615850e-47 |
| Msa0588360 | Msa1338190 | 0.867494 | 1.313383e-65 | -8.615850e-47 |
| Msa0590940 | Msa1338190 | 0.848142 | 7.398604e-60 | -8.615850e-47 |
| Msa0858770 | Msa1338190 | 0.818045 | 2.405668e-52 | -8.615850e-47 |
| Msa0867060 | Msa1338190 | 0.843506 | 1.343653e-58 | -8.615850e-47 |
| Msa0876170 | Msa1338190 | 0.833157 | 6.265235e-56 | -8.615850e-47 |
| Msa0881290 | Msa1338190 | 0.890338 | 1.078535e-73 | -8.615850e-47 |
| Msa0888810 | Msa1338190 | 0.906380 | 1.579355e-80 | -8.615850e-47 |
| Msa0915540 | Msa1338190 | 0.834483 | 2.919517e-56 | -8.615850e-47 |
| Msa0945480 | Msa1338190 | 0.847402 | 1.183282e-59 | -8.615850e-47 |
| Msa0953310 | Msa1338190 | 0.863996 | 1.669821e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1338190 | MtrunA17_Chr1g0203071 | 95.495 | 111 | 4 | 1 | 1 | 110 | 1 | 111 | 8.32e-71 | 206 |
| Msa1338190 | MtrunA17_Chr6g0470561 | 97.297 | 111 | 2 | 1 | 1 | 110 | 1 | 111 | 2.39e-70 | 205 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1338190 | AT3G53740.4 | 80.000 | 110 | 22 | 0 | 1 | 110 | 1 | 110 | 2.10e-57 | 173 |
| Msa1338190 | AT3G53740.2 | 80.000 | 110 | 22 | 0 | 1 | 110 | 1 | 110 | 2.10e-57 | 173 |
| Msa1338190 | AT3G53740.3 | 80.000 | 110 | 22 | 0 | 1 | 110 | 1 | 110 | 2.10e-57 | 173 |
| Msa1338190 | AT5G02450.1 | 81.731 | 104 | 19 | 0 | 7 | 110 | 3 | 106 | 1.24e-55 | 168 |
| Msa1338190 | AT2G37600.1 | 82.692 | 104 | 17 | 1 | 8 | 110 | 8 | 111 | 5.39e-55 | 167 |
| Msa1338190 | AT2G37600.2 | 82.692 | 104 | 17 | 1 | 8 | 110 | 8 | 111 | 5.39e-55 | 167 |
| Msa1338190 | AT3G53740.1 | 71.818 | 110 | 22 | 1 | 1 | 110 | 1 | 101 | 2.98e-48 | 149 |
Find 54 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTTCTTGGCACGTTTA+TGG | 0.140365 | tig0001724:+11776 | None:intergenic |
| CTTCTTCTTGGCACGTTTAT+GGG | 0.210182 | tig0001724:+11777 | None:intergenic |
| TACCTGCGGTAGATTGAATT+AGG | 0.234420 | tig0001724:+13731 | None:intergenic |
| TTATTTCATTCCATGTTAAC+TGG | 0.291847 | tig0001724:-11571 | Msa1338190:three_prime_UTR |
| CATCTCCTCACGCTTCTTCT+TGG | 0.294580 | tig0001724:+11765 | None:intergenic |
| CCTTTACGGCTAGAGGGTTT+AGG | 0.305250 | tig0001724:+13459 | None:intergenic |
| GCGCCGAAGCAGCCAAGTTC+GGG | 0.362471 | tig0001724:-13534 | Msa1338190:CDS |
| TTGCGCAGGGCTGGTGGAGC+AGG | 0.374917 | tig0001724:-11618 | Msa1338190:intron |
| GGCGCCGAAGCAGCCAAGTT+CGG | 0.379465 | tig0001724:-13535 | Msa1338190:CDS |
| ATAAATCATATTGTCAAAAC+AGG | 0.381439 | tig0001724:+11477 | None:intergenic |
| AGACCCGAACTTGGCTGCTT+CGG | 0.395310 | tig0001724:+13531 | None:intergenic |
| TAATGTTAAGAATGGGTGAT+TGG | 0.398603 | tig0001724:-11206 | Msa1338190:three_prime_UTR |
| CTAAACCCTCTAGCCGTAAA+GGG | 0.402747 | tig0001724:-13458 | Msa1338190:CDS |
| AAGAGCAATGTTGGATAGAA+AGG | 0.426788 | tig0001724:+11404 | None:intergenic |
| ATATGGCCTATGCCTCAATA+TGG | 0.439613 | tig0001724:-11282 | Msa1338190:three_prime_UTR |
| ATGGGTTCCGAGCTTTCTCT+TGG | 0.449681 | tig0001724:+11795 | None:intergenic |
| GAAGAGCAAACCTCATCTTT+CGG | 0.452731 | tig0001724:+11731 | None:intergenic |
| AACCTCATCCGCGAGGTAGC+TGG | 0.486512 | tig0001724:-11889 | Msa1338190:CDS |
| CCTAAACCCTCTAGCCGTAA+AGG | 0.488599 | tig0001724:-13459 | Msa1338190:CDS |
| TGTAGTTGTAATGTTAAGAA+TGG | 0.490983 | tig0001724:-11214 | Msa1338190:three_prime_UTR |
| ATCACTGAATTGCTGAAGGT+TGG | 0.491376 | tig0001724:-11844 | Msa1338190:CDS |
| TGAAGGTTGGAAAGGATAAG+AGG | 0.498071 | tig0001724:-11831 | Msa1338190:CDS |
| TGATTTATGAAAAGTACCAT+TGG | 0.498649 | tig0001724:-11462 | Msa1338190:three_prime_UTR |
| GCAAGCGTGTGCACTTTGTA+AGG | 0.505489 | tig0001724:-11912 | Msa1338190:CDS |
| AGCCAGCTACCTCGCGGATG+AGG | 0.509753 | tig0001724:+11887 | None:intergenic |
| TCAGTGATACGCTTCTCATA+AGG | 0.516197 | tig0001724:+11859 | None:intergenic |
| GCACCGCCATATTGAGGCAT+AGG | 0.516372 | tig0001724:+11276 | None:intergenic |
| CAATTTGCACCGCCATATTG+AGG | 0.518900 | tig0001724:+11270 | None:intergenic |
| TAACAACGCAAGAGCAATGT+TGG | 0.522284 | tig0001724:+11395 | None:intergenic |
| TCATACCCCTTTACGGCTAG+AGG | 0.525898 | tig0001724:+13452 | None:intergenic |
| TGTTGTTACTAAGAAGGAGT+TGG | 0.545489 | tig0001724:-13484 | Msa1338190:CDS |
| AGAGCAATGTTGGATAGAAA+GGG | 0.548129 | tig0001724:+11405 | None:intergenic |
| GGGTCATGTTGTTACTAAGA+AGG | 0.556387 | tig0001724:-13490 | Msa1338190:CDS |
| TGAATTGCTGAAGGTTGGAA+AGG | 0.563716 | tig0001724:-11839 | Msa1338190:CDS |
| CATTATCATAAGCAATGTCA+AGG | 0.568912 | tig0001724:+11347 | None:intergenic |
| AAAGTTGCCAAGAGAAAGCT+CGG | 0.571574 | tig0001724:-11802 | Msa1338190:CDS |
| AAAACTTGTCCTTCAAAACA+TGG | 0.571599 | tig0001724:+11542 | None:intergenic |
| CATACCCCTTTACGGCTAGA+GGG | 0.582186 | tig0001724:+13453 | None:intergenic |
| ACCCTAATTCAATCTACCGC+AGG | 0.584160 | tig0001724:-13733 | None:intergenic |
| GTAGTTGTAATGTTAAGAAT+GGG | 0.595748 | tig0001724:-11213 | Msa1338190:three_prime_UTR |
| AATGTCAAGGTTGCAGACAA+AGG | 0.597524 | tig0001724:+11360 | None:intergenic |
| CCTCATCTTTCGGAGGACGT+TGG | 0.608911 | tig0001724:+11741 | None:intergenic |
| ATGGGTACATCCAGTTAACA+TGG | 0.610367 | tig0001724:+11561 | None:intergenic |
| GAAGGTTGGAAAGGATAAGA+GGG | 0.613741 | tig0001724:-11830 | Msa1338190:CDS |
| GCGTATCACTGAATTGCTGA+AGG | 0.627654 | tig0001724:-11848 | Msa1338190:CDS |
| CATAAAACAGAATAATCCAA+TGG | 0.631505 | tig0001724:+11446 | None:intergenic |
| AAACTTGTCCTTCAAAACAT+GGG | 0.648003 | tig0001724:+11543 | None:intergenic |
| CCAACGTCCTCCGAAAGATG+AGG | 0.657638 | tig0001724:-11741 | Msa1338190:intron |
| TAAACCCTCTAGCCGTAAAG+GGG | 0.659101 | tig0001724:-13457 | Msa1338190:intron |
| TGGCCTATGCCTCAATATGG+CGG | 0.673730 | tig0001724:-11279 | Msa1338190:three_prime_UTR |
| GAGCAAACCTCATCTTTCGG+AGG | 0.683152 | tig0001724:+11734 | None:intergenic |
| GTGCAAAGCCAGCTACCTCG+CGG | 0.704628 | tig0001724:+11881 | None:intergenic |
| ACGTGCCAAGAAGAAGCGTG+AGG | 0.711062 | tig0001724:-11770 | Msa1338190:CDS |
| TGTAAGGAACCTCATCCGCG+AGG | 0.767870 | tig0001724:-11896 | Msa1338190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTAAAAGACATTATTT+GGG | - | tig0001724:12758-12777 | Msa1338190:intron | 10.0% |
| !!! | GGTATGATTTTTTATTTTTA+GGG | - | tig0001724:11467-11486 | Msa1338190:three_prime_UTR | 15.0% |
| !!! | TTTTAGGTTTAGTTAATTTT+TGG | - | tig0001724:11573-11592 | Msa1338190:three_prime_UTR | 15.0% |
| !!! | TTTAGGTTTAGTTAATTTTT+GGG | - | tig0001724:11574-11593 | Msa1338190:three_prime_UTR | 15.0% |
| !!! | TTTTAATTTTCATTTGTGTT+TGG | - | tig0001724:11621-11640 | Msa1338190:intron | 15.0% |
| !!! | TTTCAAGTTTAGTTAATTTT+TGG | - | tig0001724:11926-11945 | Msa1338190:intron | 15.0% |
| !!! | TTCAAGTTTAGTTAATTTTT+GGG | - | tig0001724:11927-11946 | Msa1338190:intron | 15.0% |
| !!! | AGAGTAAAATTAAATTGTTT+TGG | - | tig0001724:12303-12322 | Msa1338190:intron | 15.0% |
| !! | TAAGAAAATTAACGAAAATA+TGG | + | tig0001724:12741-12760 | None:intergenic | 15.0% |
| !! | CTTATTTAAAAGACATTATT+TGG | - | tig0001724:12757-12776 | Msa1338190:intron | 15.0% |
| !!! | TTATTATTAAACTTGTTACT+TGG | - | tig0001724:13229-13248 | Msa1338190:intron | 15.0% |
| !! | AAATGAATCTAAGAGAAAAA+TGG | + | tig0001724:11274-11293 | None:intergenic | 20.0% |
| !!! | TTCATTTTCAACAATGAATT+TGG | - | tig0001724:11287-11306 | Msa1338190:three_prime_UTR | 20.0% |
| !!! | TCATTTTCAACAATGAATTT+GGG | - | tig0001724:11288-11307 | Msa1338190:three_prime_UTR | 20.0% |
| !!! | TTTTGACTGATTTATGAATT+TGG | - | tig0001724:11316-11335 | Msa1338190:three_prime_UTR | 20.0% |
| !!! | TTTGACTGATTTATGAATTT+GGG | - | tig0001724:11317-11336 | Msa1338190:three_prime_UTR | 20.0% |
| !!! | AATTTGGGATTTTTTGATTT+TGG | - | tig0001724:11332-11351 | Msa1338190:three_prime_UTR | 20.0% |
| !!! | ATTTGGGATTTTTTGATTTT+GGG | - | tig0001724:11333-11352 | Msa1338190:three_prime_UTR | 20.0% |
| !!! | GGGTATGATTTTTTATTTTT+AGG | - | tig0001724:11466-11485 | Msa1338190:three_prime_UTR | 20.0% |
| !!! | GATAAATGAGAATCTATTTT+AGG | - | tig0001724:11557-11576 | Msa1338190:three_prime_UTR | 20.0% |
| !! | CAATAATCTGAGTAAATTAA+TGG | - | tig0001724:11681-11700 | Msa1338190:intron | 20.0% |
| !! | TCACTAATATTTAAATACCT+TGG | + | tig0001724:11850-11869 | None:intergenic | 20.0% |
| !!! | TTTTGATTTTGGTTAATGTT+TGG | - | tig0001724:11877-11896 | Msa1338190:CDS | 20.0% |
| !! | GTTATTAATTGTAATAGTGA+AGG | - | tig0001724:12009-12028 | Msa1338190:intron | 20.0% |
| !!! | AGTTTAGTTTTAAGTTTTGT+TGG | - | tig0001724:12114-12133 | Msa1338190:intron | 20.0% |
| !!! | ATTGTTCATTTTTCATCTAA+TGG | + | tig0001724:12193-12212 | None:intergenic | 20.0% |
| !!! | GAGGAATTTTTTTTATAGTT+AGG | - | tig0001724:12214-12233 | Msa1338190:intron | 20.0% |
| !!! | TTTACAATAACATGGAATTT+TGG | - | tig0001724:12537-12556 | Msa1338190:intron | 20.0% |
| !!! | TGAAACTATTTTGTGATTTT+TGG | - | tig0001724:12591-12610 | Msa1338190:intron | 20.0% |
| !! | ATAGTACTATGTAATATATC+TGG | - | tig0001724:12789-12808 | Msa1338190:intron | 20.0% |
| !! | TAATGAAATTGTTGATATTC+TGG | - | tig0001724:12901-12920 | Msa1338190:intron | 20.0% |
| !! | AATGAAATTGTTGATATTCT+GGG | - | tig0001724:12902-12921 | Msa1338190:intron | 20.0% |
| !! | AGTTTAATAATAAAACACCT+GGG | + | tig0001724:13222-13241 | None:intergenic | 20.0% |
| !! | AAGTTTAATAATAAAACACC+TGG | + | tig0001724:13223-13242 | None:intergenic | 20.0% |
| !! | ATAAATCATATTGTCAAAAC+AGG | + | tig0001724:13429-13448 | None:intergenic | 20.0% |
| !!! | AAACAAAGCCTTATTTTTTA+TGG | - | tig0001724:13579-13598 | Msa1338190:intron | 20.0% |
| !! | CATTGAAACCATAAAAAATA+AGG | + | tig0001724:13590-13609 | None:intergenic | 20.0% |
| ! | ATGAAATTGATTGAAGGAAT+TGG | + | tig0001724:11229-11248 | None:intergenic | 25.0% |
| !! | ATGATGATGAAATTGATTGA+AGG | + | tig0001724:11235-11254 | None:intergenic | 25.0% |
| !!! | ATTTTTTGATTTTGGGTTTC+AGG | - | tig0001724:11340-11359 | Msa1338190:three_prime_UTR | 25.0% |
| ! | TAAAAAATCATACCCCTTTA+CGG | + | tig0001724:11461-11480 | None:intergenic | 25.0% |
| !! | GTTATTGTTCATTTTGTGTT+TGG | - | tig0001724:11535-11554 | Msa1338190:three_prime_UTR | 25.0% |
| !!! | TTAATTTTTGGGTATAGTGA+TGG | - | tig0001724:11585-11604 | Msa1338190:exon | 25.0% |
| !!! | GTTTTTTATTGAAAATGCCA+AGG | - | tig0001724:11830-11849 | Msa1338190:CDS | 25.0% |
| !! | TTTGGTTAATGTTTGGAATT+TGG | - | tig0001724:11884-11903 | Msa1338190:CDS | 25.0% |
| ! | AGATGAAAAATGAACAATTG+AGG | - | tig0001724:12195-12214 | Msa1338190:intron | 25.0% |
| ! | ACATCAAATCACATAACAAA+TGG | + | tig0001724:12489-12508 | None:intergenic | 25.0% |
| ! | AGTTTCAATTGAAATCCAAA+GGG | + | tig0001724:12578-12597 | None:intergenic | 25.0% |
| ! | TAGTTTCAATTGAAATCCAA+AGG | + | tig0001724:12579-12598 | None:intergenic | 25.0% |
| !!! | CTATTTTGTGATTTTTGGAA+TGG | - | tig0001724:12596-12615 | Msa1338190:intron | 25.0% |
| ! | TAACTCAAATACATTCAATG+AGG | + | tig0001724:12679-12698 | None:intergenic | 25.0% |
| !! | ATATATCTGGAGTCAAAATA+TGG | - | tig0001724:12802-12821 | Msa1338190:intron | 25.0% |
| ! | TTATCATTGATACTGTTCTT+TGG | - | tig0001724:12930-12949 | Msa1338190:intron | 25.0% |
| !!! | TTTTGTTTATTATACATCCC+AGG | - | tig0001724:13202-13221 | Msa1338190:intron | 25.0% |
| !!! | TATCTTTTTAATTTTGCGCA+GGG | - | tig0001724:13272-13291 | Msa1338190:intron | 25.0% |
| ! | TTATTTCATTCCATGTTAAC+TGG | - | tig0001724:13332-13351 | Msa1338190:intron | 25.0% |
| !!! | TGATTTATGAAAAGTACCAT+TGG | - | tig0001724:13441-13460 | Msa1338190:intron | 25.0% |
| ! | CATAAAACAGAATAATCCAA+TGG | + | tig0001724:13460-13479 | None:intergenic | 25.0% |
| ! | TGTAGTTGTAATGTTAAGAA+TGG | - | tig0001724:13689-13708 | Msa1338190:intron | 25.0% |
| ! | GTAGTTGTAATGTTAAGAAT+GGG | - | tig0001724:13690-13709 | Msa1338190:intron | 25.0% |
| ATCTAAGAGAAAAATGGTAG+AGG | + | tig0001724:11268-11287 | None:intergenic | 30.0% | |
| ! | TCTTTTTGTTGGATTGAACA+AGG | - | tig0001724:11392-11411 | Msa1338190:three_prime_UTR | 30.0% |
| ! | CTTTTTGTTGGATTGAACAA+GGG | - | tig0001724:11393-11412 | Msa1338190:three_prime_UTR | 30.0% |
| TTAGATATTAGTGATGCGTT+TGG | - | tig0001724:11491-11510 | Msa1338190:three_prime_UTR | 30.0% | |
| ! | TCGTCTTTTGAGCTAATTTT+TGG | - | tig0001724:11752-11771 | Msa1338190:CDS | 30.0% |
| ! | CGTCTTTTGAGCTAATTTTT+GGG | - | tig0001724:11753-11772 | Msa1338190:CDS | 30.0% |
| !!! | GTGACTGTTTGTTTTGATTT+TGG | - | tig0001724:11866-11885 | Msa1338190:CDS | 30.0% |
| !!! | AGTCTTTATTTTTTGCCCTT+TGG | - | tig0001724:12560-12579 | Msa1338190:intron | 30.0% |
| ! | AAGCTGTTGCATTTTCATAT+AGG | + | tig0001724:12704-12723 | None:intergenic | 30.0% |
| ATATGAAAATGCAACAGCTT+TGG | - | tig0001724:12704-12723 | Msa1338190:intron | 30.0% | |
| !!! | CTATCTTTTTAATTTTGCGC+AGG | - | tig0001724:13271-13290 | Msa1338190:intron | 30.0% |
| AAACTTGTCCTTCAAAACAT+GGG | + | tig0001724:13363-13382 | None:intergenic | 30.0% | |
| AAAACTTGTCCTTCAAAACA+TGG | + | tig0001724:13364-13383 | None:intergenic | 30.0% | |
| CATTATCATAAGCAATGTCA+AGG | + | tig0001724:13559-13578 | None:intergenic | 30.0% | |
| ! | TCAATGCTTTTGTAGTGATA+TGG | - | tig0001724:13604-13623 | Msa1338190:intron | 30.0% |
| TAATGTTAAGAATGGGTGAT+TGG | - | tig0001724:13697-13716 | Msa1338190:intron | 30.0% | |
| AGAGAGAGAAAATTAGGGTT+TGG | + | tig0001724:11200-11219 | None:intergenic | 35.0% | |
| AGAGGAGAGAGAGAAAATTA+GGG | + | tig0001724:11205-11224 | None:intergenic | 35.0% | |
| AAGAGGAGAGAGAGAAAATT+AGG | + | tig0001724:11206-11225 | None:intergenic | 35.0% | |
| TTGATTGAAGGAATTGGAAG+AGG | + | tig0001724:11223-11242 | None:intergenic | 35.0% | |
| !!! | GATTTTGGGTTTCAGGAAAA+TGG | - | tig0001724:11347-11366 | Msa1338190:three_prime_UTR | 35.0% |
| TGTTGTTACTAAGAAGGAGT+TGG | - | tig0001724:11419-11438 | Msa1338190:three_prime_UTR | 35.0% | |
| ! | GTTTAGATTTTGCGTTGTGT+TGG | - | tig0001724:12060-12079 | Msa1338190:intron | 35.0% |
| ! | CATTTTCGTTGCAATGCAAA+TGG | - | tig0001724:12160-12179 | Msa1338190:intron | 35.0% |
| ! | TTTTATAGTTAGGCCCTCTT+TGG | - | tig0001724:12224-12243 | Msa1338190:intron | 35.0% |
| GAAGCTGAAAATACCAAAGA+GGG | + | tig0001724:12240-12259 | None:intergenic | 35.0% | |
| TCAAATAAGCTCATCCAAAC+AGG | - | tig0001724:12463-12482 | Msa1338190:intron | 35.0% | |
| ! | GGCACTGTTTTACAATAACA+TGG | - | tig0001724:12529-12548 | Msa1338190:intron | 35.0% |
| ! | TCTGTTTTATGCTAGAAACG+AGG | - | tig0001724:13469-13488 | Msa1338190:CDS | 35.0% |
| AGAGCAATGTTGGATAGAAA+GGG | + | tig0001724:13501-13520 | None:intergenic | 35.0% | |
| AAGAGCAATGTTGGATAGAA+AGG | + | tig0001724:13502-13521 | None:intergenic | 35.0% | |
| ! | ATTAGGGTTTGGTTTACCTG+CGG | + | tig0001724:11189-11208 | None:intergenic | 40.0% |
| GGGTCATGTTGTTACTAAGA+AGG | - | tig0001724:11413-11432 | Msa1338190:three_prime_UTR | 40.0% | |
| !!! | GAGCTAATTTTTGGGTTCAG+AGG | - | tig0001724:11761-11780 | Msa1338190:CDS | 40.0% |
| GAGATTAGTGATGCATTTGC+AGG | - | tig0001724:11954-11973 | Msa1338190:intron | 40.0% | |
| CGAAGCTGAAAATACCAAAG+AGG | + | tig0001724:12241-12260 | None:intergenic | 40.0% | |
| !! | GCTGTTTTCATGAGCTGTTT+TGG | - | tig0001724:12338-12357 | Msa1338190:intron | 40.0% |
| GATCGTTTGTGAGACTGTTT+GGG | + | tig0001724:12426-12445 | None:intergenic | 40.0% | |
| AGATCGTTTGTGAGACTGTT+TGG | + | tig0001724:12427-12446 | None:intergenic | 40.0% | |
| CACATAACAAATGGCCTGTT+TGG | + | tig0001724:12480-12499 | None:intergenic | 40.0% | |
| ! | TGAGTTGAGTTGTAGAATGC+AGG | - | tig0001724:12508-12527 | Msa1338190:intron | 40.0% |
| TTGGTCCTAGTCCTAATATG+CGG | - | tig0001724:12949-12968 | Msa1338190:intron | 40.0% | |
| !!! | GCTTGCTAGTTTTCTGTTCA+AGG | + | tig0001724:12977-12996 | None:intergenic | 40.0% |
| TCAGTGATACGCTTCTCATA+AGG | + | tig0001724:13047-13066 | None:intergenic | 40.0% | |
| ATCACTGAATTGCTGAAGGT+TGG | - | tig0001724:13059-13078 | Msa1338190:intron | 40.0% | |
| TGAATTGCTGAAGGTTGGAA+AGG | - | tig0001724:13064-13083 | Msa1338190:intron | 40.0% | |
| TGAAGGTTGGAAAGGATAAG+AGG | - | tig0001724:13072-13091 | Msa1338190:intron | 40.0% | |
| GAAGGTTGGAAAGGATAAGA+GGG | - | tig0001724:13073-13092 | Msa1338190:intron | 40.0% | |
| AAAGTTGCCAAGAGAAAGCT+CGG | - | tig0001724:13101-13120 | Msa1338190:intron | 40.0% | |
| CTTCTTCTTGGCACGTTTAT+GGG | + | tig0001724:13129-13148 | None:intergenic | 40.0% | |
| GAAGAGCAAACCTCATCTTT+CGG | + | tig0001724:13175-13194 | None:intergenic | 40.0% | |
| !!! | TTTTTAATTTTGCGCAGGGC+TGG | - | tig0001724:13276-13295 | Msa1338190:intron | 40.0% |
| ATGGGTACATCCAGTTAACA+TGG | + | tig0001724:13345-13364 | None:intergenic | 40.0% | |
| !! | TGGATGTACCCATGTTTTGA+AGG | - | tig0001724:13352-13371 | Msa1338190:intron | 40.0% |
| TAACAACGCAAGAGCAATGT+TGG | + | tig0001724:13511-13530 | None:intergenic | 40.0% | |
| AATGTCAAGGTTGCAGACAA+AGG | + | tig0001724:13546-13565 | None:intergenic | 40.0% | |
| ATATGGCCTATGCCTCAATA+TGG | - | tig0001724:13621-13640 | Msa1338190:intron | 40.0% | |
| CCAACAAAAAGACCCGAACT+TGG | + | tig0001724:11384-11403 | None:intergenic | 45.0% | |
| ! | CCAAGTTCGGGTCTTTTTGT+TGG | - | tig0001724:11381-11400 | Msa1338190:three_prime_UTR | 45.0% |
| CTAAACCCTCTAGCCGTAAA+GGG | - | tig0001724:11445-11464 | Msa1338190:three_prime_UTR | 45.0% | |
| TAAACCCTCTAGCCGTAAAG+GGG | - | tig0001724:11446-11465 | Msa1338190:three_prime_UTR | 45.0% | |
| !! | TGTTCAAGGCACCGCATATT+AGG | + | tig0001724:12963-12982 | None:intergenic | 45.0% |
| GCGTATCACTGAATTGCTGA+AGG | - | tig0001724:13055-13074 | Msa1338190:intron | 45.0% | |
| GCTTCTTCTTGGCACGTTTA+TGG | + | tig0001724:13130-13149 | None:intergenic | 45.0% | |
| CAATTTGCACCGCCATATTG+AGG | + | tig0001724:13636-13655 | None:intergenic | 45.0% | |
| CCTTTACGGCTAGAGGGTTT+AGG | + | tig0001724:11447-11466 | None:intergenic | 50.0% | |
| CCTAAACCCTCTAGCCGTAA+AGG | - | tig0001724:11444-11463 | Msa1338190:three_prime_UTR | 50.0% | |
| CATACCCCTTTACGGCTAGA+GGG | + | tig0001724:11453-11472 | None:intergenic | 50.0% | |
| TCATACCCCTTTACGGCTAG+AGG | + | tig0001724:11454-11473 | None:intergenic | 50.0% | |
| ! | AGGCACCGCATATTAGGACT+AGG | + | tig0001724:12957-12976 | None:intergenic | 50.0% |
| GCAAGCGTGTGCACTTTGTA+AGG | - | tig0001724:12991-13010 | Msa1338190:intron | 50.0% | |
| ATGGGTTCCGAGCTTTCTCT+TGG | + | tig0001724:13111-13130 | None:intergenic | 50.0% | |
| CATCTCCTCACGCTTCTTCT+TGG | + | tig0001724:13141-13160 | None:intergenic | 50.0% | |
| GAGCAAACCTCATCTTTCGG+AGG | + | tig0001724:13172-13191 | None:intergenic | 50.0% | |
| ! | TTAATTTTGCGCAGGGCTGG+TGG | - | tig0001724:13279-13298 | Msa1338190:intron | 50.0% |
| TGGCCTATGCCTCAATATGG+CGG | - | tig0001724:13624-13643 | Msa1338190:intron | 50.0% | |
| AGACCCGAACTTGGCTGCTT+CGG | + | tig0001724:11375-11394 | None:intergenic | 55.0% | |
| TGTAAGGAACCTCATCCGCG+AGG | - | tig0001724:13007-13026 | Msa1338190:intron | 55.0% | |
| ! | ACGTGCCAAGAAGAAGCGTG+AGG | - | tig0001724:13133-13152 | Msa1338190:intron | 55.0% |
| CCTCATCTTTCGGAGGACGT+TGG | + | tig0001724:13165-13184 | None:intergenic | 55.0% | |
| CCAACGTCCTCCGAAAGATG+AGG | - | tig0001724:13162-13181 | Msa1338190:intron | 55.0% | |
| GCACCGCCATATTGAGGCAT+AGG | + | tig0001724:13630-13649 | None:intergenic | 55.0% | |
| AACCTCATCCGCGAGGTAGC+TGG | - | tig0001724:13014-13033 | Msa1338190:intron | 60.0% | |
| GTGCAAAGCCAGCTACCTCG+CGG | + | tig0001724:13025-13044 | None:intergenic | 60.0% | |
| ! | GGCGCCGAAGCAGCCAAGTT+CGG | - | tig0001724:11368-11387 | Msa1338190:three_prime_UTR | 65.0% |
| GCGCCGAAGCAGCCAAGTTC+GGG | - | tig0001724:11369-11388 | Msa1338190:three_prime_UTR | 65.0% | |
| AGCCAGCTACCTCGCGGATG+AGG | + | tig0001724:13019-13038 | None:intergenic | 65.0% | |
| ! | TTGCGCAGGGCTGGTGGAGC+AGG | - | tig0001724:13285-13304 | Msa1338190:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0001724 | gene | 11175 | 13750 | 11175 | ID=Msa1338190;Name=Msa1338190 |
| tig0001724 | mRNA | 11175 | 13750 | 11175 | ID=Msa1338190-mRNA-1;Parent=Msa1338190;Name=Msa1338190-mRNA-1;_AED=0.03;_eAED=0.03;_QI=21|1|1|1|0.66|0.5|4|427|110 |
| tig0001724 | exon | 11175 | 11632 | 11175 | ID=Msa1338190-mRNA-1:exon:1538;Parent=Msa1338190-mRNA-1 |
| tig0001724 | exon | 11742 | 11941 | 11742 | ID=Msa1338190-mRNA-1:exon:1537;Parent=Msa1338190-mRNA-1 |
| tig0001724 | exon | 13458 | 13563 | 13458 | ID=Msa1338190-mRNA-1:exon:1536;Parent=Msa1338190-mRNA-1 |
| tig0001724 | exon | 13734 | 13750 | 13734 | ID=Msa1338190-mRNA-1:exon:1535;Parent=Msa1338190-mRNA-1 |
| tig0001724 | five_prime_UTR | 13734 | 13750 | 13734 | ID=Msa1338190-mRNA-1:five_prime_utr;Parent=Msa1338190-mRNA-1 |
| tig0001724 | five_prime_UTR | 13560 | 13563 | 13560 | ID=Msa1338190-mRNA-1:five_prime_utr;Parent=Msa1338190-mRNA-1 |
| tig0001724 | CDS | 13458 | 13559 | 13458 | ID=Msa1338190-mRNA-1:cds;Parent=Msa1338190-mRNA-1 |
| tig0001724 | CDS | 11742 | 11941 | 11742 | ID=Msa1338190-mRNA-1:cds;Parent=Msa1338190-mRNA-1 |
| tig0001724 | CDS | 11602 | 11632 | 11602 | ID=Msa1338190-mRNA-1:cds;Parent=Msa1338190-mRNA-1 |
| tig0001724 | three_prime_UTR | 11175 | 11601 | 11175 | ID=Msa1338190-mRNA-1:three_prime_utr;Parent=Msa1338190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
