Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343260 | KAF4397433.1 | 99.048 | 105 | 1 | 0 | 1 | 105 | 50 | 154 | 2.20e-68 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343260 | sp|Q96499|RL44_GOSHI | 97.143 | 105 | 3 | 0 | 1 | 105 | 1 | 105 | 4.34e-69 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343260 | A0A7J6HQ78 | 99.048 | 105 | 1 | 0 | 1 | 105 | 50 | 154 | 1.05e-68 | 212 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa1343260 | 0.818869 | 1.565173e-52 | -8.615850e-47 |
| Msa0002750 | Msa1343260 | 0.883960 | 2.881845e-71 | -8.615850e-47 |
| Msa0002790 | Msa1343260 | 0.876446 | 1.387458e-68 | -8.615850e-47 |
| Msa0003720 | Msa1343260 | 0.802326 | 5.916261e-49 | -8.615850e-47 |
| Msa0003780 | Msa1343260 | 0.829114 | 6.168034e-55 | -8.615850e-47 |
| Msa0022970 | Msa1343260 | 0.801539 | 8.586700e-49 | -8.615850e-47 |
| Msa0026130 | Msa1343260 | 0.801432 | 9.030369e-49 | -8.615850e-47 |
| Msa0027260 | Msa1343260 | 0.869310 | 3.407913e-66 | -8.615850e-47 |
| Msa0032780 | Msa1343260 | 0.826711 | 2.334684e-54 | -8.615850e-47 |
| Msa0040690 | Msa1343260 | 0.811712 | 6.102384e-51 | -8.615850e-47 |
| Msa0042280 | Msa1343260 | 0.827137 | 1.847027e-54 | -8.615850e-47 |
| Msa0047160 | Msa1343260 | 0.828079 | 1.097343e-54 | -8.615850e-47 |
| Msa0048180 | Msa1343260 | 0.858889 | 6.040880e-63 | -8.615850e-47 |
| Msa0049370 | Msa1343260 | 0.826206 | 3.080272e-54 | -8.615850e-47 |
| Msa0055180 | Msa1343260 | 0.807629 | 4.603520e-50 | -8.615850e-47 |
| Msa0055190 | Msa1343260 | 0.807995 | 3.849883e-50 | -8.615850e-47 |
| Msa0056470 | Msa1343260 | 0.865018 | 8.005315e-65 | -8.615850e-47 |
| Msa0074030 | Msa1343260 | 0.879632 | 1.063080e-69 | -8.615850e-47 |
| Msa0075170 | Msa1343260 | 0.806291 | 8.834037e-50 | -8.615850e-47 |
| Msa0076040 | Msa1343260 | 0.840551 | 8.121577e-58 | -8.615850e-47 |
| Msa0086750 | Msa1343260 | 0.880251 | 6.403008e-70 | -8.615850e-47 |
| Msa0091880 | Msa1343260 | 0.811057 | 8.469770e-51 | -8.615850e-47 |
| Msa0094470 | Msa1343260 | 0.840548 | 8.136053e-58 | -8.615850e-47 |
| Msa0100740 | Msa1343260 | 0.828564 | 8.381885e-55 | -8.615850e-47 |
| Msa0105370 | Msa1343260 | 0.831545 | 1.571224e-55 | -8.615850e-47 |
| Msa0114870 | Msa1343260 | 0.844650 | 6.630262e-59 | -8.615850e-47 |
| Msa0116130 | Msa1343260 | 0.818084 | 2.357267e-52 | -8.615850e-47 |
| Msa0116670 | Msa1343260 | 0.861396 | 1.057010e-63 | -8.615850e-47 |
| Msa0118710 | Msa1343260 | 0.810511 | 1.111605e-50 | -8.615850e-47 |
| Msa0603320 | Msa1343260 | 0.840550 | 8.125510e-58 | -8.615850e-47 |
| Msa0606580 | Msa1343260 | 0.815775 | 7.775544e-52 | -8.615850e-47 |
| Msa0608320 | Msa1343260 | 0.839044 | 2.005014e-57 | -8.615850e-47 |
| Msa0615440 | Msa1343260 | 0.805202 | 1.495617e-49 | -8.615850e-47 |
| Msa0615580 | Msa1343260 | 0.826524 | 2.588190e-54 | -8.615850e-47 |
| Msa0621950 | Msa1343260 | 0.834214 | 3.411493e-56 | -8.615850e-47 |
| Msa0622750 | Msa1343260 | 0.811986 | 5.321026e-51 | -8.615850e-47 |
| Msa0623200 | Msa1343260 | 0.811161 | 8.040984e-51 | -8.615850e-47 |
| Msa0631250 | Msa1343260 | 0.801064 | 1.074060e-48 | -8.615850e-47 |
| Msa0644350 | Msa1343260 | 0.812447 | 4.220893e-51 | -8.615850e-47 |
| Msa0647280 | Msa1343260 | 0.802628 | 5.126278e-49 | -8.615850e-47 |
| Msa0661300 | Msa1343260 | 0.871802 | 5.176771e-67 | -8.615850e-47 |
| Msa0666230 | Msa1343260 | 0.841604 | 4.295459e-58 | -8.615850e-47 |
| Msa0669520 | Msa1343260 | 0.850218 | 1.957565e-60 | -8.615850e-47 |
| Msa0686800 | Msa1343260 | 0.802717 | 4.913058e-49 | -8.615850e-47 |
| Msa0687870 | Msa1343260 | 0.814415 | 1.558576e-51 | -8.615850e-47 |
| Msa0698490 | Msa1343260 | 0.804806 | 1.810447e-49 | -8.615850e-47 |
| Msa0698660 | Msa1343260 | 0.803026 | 4.242409e-49 | -8.615850e-47 |
| Msa0698780 | Msa1343260 | 0.877048 | 8.586538e-69 | -8.615850e-47 |
| Msa0725440 | Msa1343260 | 0.823796 | 1.142266e-53 | -8.615850e-47 |
| Msa0729200 | Msa1343260 | 0.830685 | 2.555265e-55 | -8.615850e-47 |
| Msa0738100 | Msa1343260 | 0.838004 | 3.720758e-57 | -8.615850e-47 |
| Msa0749760 | Msa1343260 | 0.803181 | 3.940670e-49 | -8.615850e-47 |
| Msa0769590 | Msa1343260 | 0.835339 | 1.777905e-56 | -8.615850e-47 |
| Msa0784200 | Msa1343260 | 0.847824 | 9.052843e-60 | -8.615850e-47 |
| Msa0785130 | Msa1343260 | 0.866016 | 3.878254e-65 | -8.615850e-47 |
| Msa0790400 | Msa1343260 | 0.833403 | 5.441838e-56 | -8.615850e-47 |
| Msa0792420 | Msa1343260 | 0.815411 | 9.371033e-52 | -8.615850e-47 |
| Msa0792760 | Msa1343260 | 0.821204 | 4.572631e-53 | -8.615850e-47 |
| Msa0797880 | Msa1343260 | 0.808950 | 2.406840e-50 | -8.615850e-47 |
| Msa0806880 | Msa1343260 | 0.843618 | 1.254089e-58 | -8.615850e-47 |
| Msa0808800 | Msa1343260 | 0.819840 | 9.403081e-53 | -8.615850e-47 |
| Msa0817540 | Msa1343260 | 0.886554 | 3.090509e-72 | -8.615850e-47 |
| Msa0818310 | Msa1343260 | 0.844636 | 6.687468e-59 | -8.615850e-47 |
| Msa0830090 | Msa1343260 | 0.859889 | 3.025631e-63 | -8.615850e-47 |
| Msa0835420 | Msa1343260 | 0.812661 | 3.789655e-51 | -8.615850e-47 |
| Msa0125450 | Msa1343260 | 0.811137 | 8.137622e-51 | -8.615850e-47 |
| Msa0125540 | Msa1343260 | 0.807488 | 4.932097e-50 | -8.615850e-47 |
| Msa0127310 | Msa1343260 | 0.802803 | 4.717000e-49 | -8.615850e-47 |
| Msa0128860 | Msa1343260 | 0.871387 | 7.104425e-67 | -8.615850e-47 |
| Msa0133540 | Msa1343260 | 0.827323 | 1.666595e-54 | -8.615850e-47 |
| Msa0140820 | Msa1343260 | 0.859726 | 3.387130e-63 | -8.615850e-47 |
| Msa0140850 | Msa1343260 | 0.871579 | 6.136209e-67 | -8.615850e-47 |
| Msa0146280 | Msa1343260 | 0.807875 | 4.081241e-50 | -8.615850e-47 |
| Msa0146340 | Msa1343260 | 0.844730 | 6.306896e-59 | -8.615850e-47 |
| Msa0149200 | Msa1343260 | 0.811481 | 6.852966e-51 | -8.615850e-47 |
| Msa0163760 | Msa1343260 | 0.829672 | 4.514776e-55 | -8.615850e-47 |
| Msa0166590 | Msa1343260 | 0.802122 | 6.516440e-49 | -8.615850e-47 |
| Msa0167480 | Msa1343260 | 0.822554 | 2.226408e-53 | -8.615850e-47 |
| Msa0172900 | Msa1343260 | 0.846515 | 2.069372e-59 | -8.615850e-47 |
| Msa0173530 | Msa1343260 | 0.864189 | 1.454229e-64 | -8.615850e-47 |
| Msa0174730 | Msa1343260 | 0.871880 | 4.875516e-67 | -8.615850e-47 |
| Msa0179030 | Msa1343260 | 0.826529 | 2.580673e-54 | -8.615850e-47 |
| Msa0181490 | Msa1343260 | 0.813796 | 2.135413e-51 | -8.615850e-47 |
| Msa0181610 | Msa1343260 | 0.826290 | 2.941427e-54 | -8.615850e-47 |
| Msa0183090 | Msa1343260 | 0.827576 | 1.449414e-54 | -8.615850e-47 |
| Msa0183900 | Msa1343260 | 0.802445 | 5.591190e-49 | -8.615850e-47 |
| Msa0187930 | Msa1343260 | 0.831604 | 1.519304e-55 | -8.615850e-47 |
| Msa0188350 | Msa1343260 | 0.827482 | 1.527107e-54 | -8.615850e-47 |
| Msa0188690 | Msa1343260 | 0.839055 | 1.991504e-57 | -8.615850e-47 |
| Msa0189700 | Msa1343260 | 0.982889 | 2.870372e-156 | -8.615850e-47 |
| Msa0194540 | Msa1343260 | 0.824941 | 6.144950e-54 | -8.615850e-47 |
| Msa0199880 | Msa1343260 | 0.820038 | 8.471537e-53 | -8.615850e-47 |
| Msa0209510 | Msa1343260 | 0.802683 | 4.993678e-49 | -8.615850e-47 |
| Msa0210360 | Msa1343260 | 0.814733 | 1.325820e-51 | -8.615850e-47 |
| Msa0218830 | Msa1343260 | 0.837869 | 4.029727e-57 | -8.615850e-47 |
| Msa0221030 | Msa1343260 | 0.848661 | 5.316237e-60 | -8.615850e-47 |
| Msa0229760 | Msa1343260 | 0.815998 | 6.934232e-52 | -8.615850e-47 |
| Msa0230490 | Msa1343260 | 0.873006 | 2.052871e-67 | -8.615850e-47 |
| Msa0231100 | Msa1343260 | 0.842341 | 2.743252e-58 | -8.615850e-47 |
| Msa0232010 | Msa1343260 | 0.978659 | 2.736183e-146 | -8.615850e-47 |
| Msa0232080 | Msa1343260 | 0.978836 | 1.148484e-146 | -8.615850e-47 |
| Msa1229320 | Msa1343260 | 0.825480 | 4.582431e-54 | -8.615850e-47 |
| Msa1230580 | Msa1343260 | 0.822750 | 2.004435e-53 | -8.615850e-47 |
| Msa1251160 | Msa1343260 | 0.846198 | 2.524782e-59 | -8.615850e-47 |
| Msa1256840 | Msa1343260 | 0.825886 | 3.669667e-54 | -8.615850e-47 |
| Msa1257510 | Msa1343260 | 0.877911 | 4.298376e-69 | -8.615850e-47 |
| Msa1262890 | Msa1343260 | 0.809037 | 2.305922e-50 | -8.615850e-47 |
| Msa1265630 | Msa1343260 | 0.834293 | 3.259852e-56 | -8.615850e-47 |
| Msa1266060 | Msa1343260 | 0.861851 | 7.669625e-64 | -8.615850e-47 |
| Msa1273340 | Msa1343260 | 0.813050 | 3.114266e-51 | -8.615850e-47 |
| Msa1299590 | Msa1343260 | 0.871261 | 7.820705e-67 | -8.615850e-47 |
| Msa1305050 | Msa1343260 | 0.846568 | 2.001702e-59 | -8.615850e-47 |
| Msa1311400 | Msa1343260 | 0.813622 | 2.332105e-51 | -8.615850e-47 |
| Msa1321790 | Msa1343260 | 0.833312 | 5.732593e-56 | -8.615850e-47 |
| Msa1331250 | Msa1343260 | 0.800880 | 1.171086e-48 | -8.615850e-47 |
| Msa1332250 | Msa1343260 | 0.879272 | 1.426464e-69 | -8.615850e-47 |
| Msa1338190 | Msa1343260 | 0.914813 | 1.233464e-84 | -8.615850e-47 |
| Msa1343260 | Msa1343290 | 0.802785 | 4.756778e-49 | -8.615850e-47 |
| Msa1343260 | Msa1349570 | 0.827011 | 1.979736e-54 | -8.615850e-47 |
| Msa1343260 | Msa1362790 | 0.841483 | 4.622451e-58 | -8.615850e-47 |
| Msa1343260 | Msa1363330 | 0.863259 | 2.827339e-64 | -8.615850e-47 |
| Msa1343260 | Msa1366180 | 0.831465 | 1.644360e-55 | -8.615850e-47 |
| Msa1343260 | Msa1366800 | 0.818291 | 2.116778e-52 | -8.615850e-47 |
| Msa1343260 | Msa1367590 | 0.803797 | 2.936966e-49 | -8.615850e-47 |
| Msa1343260 | Msa1369190 | 0.817588 | 3.050987e-52 | -8.615850e-47 |
| Msa1343260 | Msa1374060 | 0.811427 | 7.040222e-51 | -8.615850e-47 |
| Msa1343260 | Msa1374120 | 0.825031 | 5.849674e-54 | -8.615850e-47 |
| Msa1343260 | Msa1376650 | 0.811104 | 8.271725e-51 | -8.615850e-47 |
| Msa1343260 | Msa1379760 | 0.866014 | 3.885378e-65 | -8.615850e-47 |
| Msa1343260 | Msa1381350 | 0.814294 | 1.657494e-51 | -8.615850e-47 |
| Msa1343260 | Msa1382560 | 0.809113 | 2.221838e-50 | -8.615850e-47 |
| Msa1343260 | Msa1382620 | 0.802909 | 4.485602e-49 | -8.615850e-47 |
| Msa1343260 | Msa1386600 | 0.862960 | 3.499799e-64 | -8.615850e-47 |
| Msa1343260 | Msa1394290 | 0.832517 | 9.033880e-56 | -8.615850e-47 |
| Msa1343260 | Msa1399530 | 0.822598 | 2.174479e-53 | -8.615850e-47 |
| Msa1343260 | Msa1410440 | 0.852036 | 6.005175e-61 | -8.615850e-47 |
| Msa1343260 | Msa1413260 | 0.820844 | 5.534899e-53 | -8.615850e-47 |
| Msa1343260 | Msa1413500 | 0.839429 | 1.592788e-57 | -8.615850e-47 |
| Msa1343260 | Msa1418770 | 0.820938 | 5.264738e-53 | -8.615850e-47 |
| Msa1343260 | Msa1425670 | 0.812678 | 3.756141e-51 | -8.615850e-47 |
| Msa1343260 | Msa1426120 | 0.870877 | 1.046973e-66 | -8.615850e-47 |
| Msa1343260 | Msa1426370 | 0.816259 | 6.063885e-52 | -8.615850e-47 |
| Msa1343260 | Msa1426490 | 0.831954 | 1.245052e-55 | -8.615850e-47 |
| Msa1343260 | Msa1427560 | 0.837533 | 4.915705e-57 | -8.615850e-47 |
| Msa1343260 | Msa1432700 | 0.835916 | 1.269810e-56 | -8.615850e-47 |
| Msa1343260 | Msa1433310 | 0.855762 | 5.074993e-62 | -8.615850e-47 |
| Msa1343260 | Msa1443300 | 0.843092 | 1.733120e-58 | -8.615850e-47 |
| Msa1343260 | Msa1446810 | 0.812296 | 4.554209e-51 | -8.615850e-47 |
| Msa1343260 | Msa1448690 | 0.840678 | 7.522917e-58 | -8.615850e-47 |
| Msa1343260 | Msa1450280 | 0.837427 | 5.232011e-57 | -8.615850e-47 |
| Msa1343260 | Msa1456050 | 0.849908 | 2.390366e-60 | -8.615850e-47 |
| Msa1343260 | Msa1457920 | 0.805479 | 1.308962e-49 | -8.615850e-47 |
| Msa0366890 | Msa1343260 | 0.811345 | 7.335275e-51 | -8.615850e-47 |
| Msa0369450 | Msa1343260 | 0.884159 | 2.433651e-71 | -8.615850e-47 |
| Msa0380300 | Msa1343260 | 0.822743 | 2.012139e-53 | -8.615850e-47 |
| Msa0387730 | Msa1343260 | 0.818243 | 2.170247e-52 | -8.615850e-47 |
| Msa0395820 | Msa1343260 | 0.818968 | 1.486090e-52 | -8.615850e-47 |
| Msa0423750 | Msa1343260 | 0.811945 | 5.429706e-51 | -8.615850e-47 |
| Msa0427150 | Msa1343260 | 0.826228 | 3.044349e-54 | -8.615850e-47 |
| Msa0443390 | Msa1343260 | 0.868140 | 8.146139e-66 | -8.615850e-47 |
| Msa0462110 | Msa1343260 | 0.819719 | 1.002219e-52 | -8.615850e-47 |
| Msa0482650 | Msa1343260 | 0.854302 | 1.347265e-61 | -8.615850e-47 |
| Msa0989540 | Msa1343260 | 0.805660 | 1.199410e-49 | -8.615850e-47 |
| Msa1006840 | Msa1343260 | 0.869656 | 2.628787e-66 | -8.615850e-47 |
| Msa1012740 | Msa1343260 | 0.818925 | 1.519438e-52 | -8.615850e-47 |
| Msa1013400 | Msa1343260 | 0.850854 | 1.297102e-60 | -8.615850e-47 |
| Msa1019240 | Msa1343260 | 0.868654 | 5.561419e-66 | -8.615850e-47 |
| Msa1019260 | Msa1343260 | 0.884631 | 1.625637e-71 | -8.615850e-47 |
| Msa1024180 | Msa1343260 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa1039520 | Msa1343260 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa1043690 | Msa1343260 | 0.815359 | 9.628362e-52 | -8.615850e-47 |
| Msa1072710 | Msa1343260 | 0.847554 | 1.074509e-59 | -8.615850e-47 |
| Msa1078870 | Msa1343260 | 0.870363 | 1.544454e-66 | -8.615850e-47 |
| Msa1078980 | Msa1343260 | 0.832128 | 1.127810e-55 | -8.615850e-47 |
| Msa1080350 | Msa1343260 | 0.809214 | 2.113835e-50 | -8.615850e-47 |
| Msa1081150 | Msa1343260 | 0.839226 | 1.798194e-57 | -8.615850e-47 |
| Msa1081930 | Msa1343260 | 0.846830 | 1.697505e-59 | -8.615850e-47 |
| Msa1088490 | Msa1343260 | 0.825127 | 5.552905e-54 | -8.615850e-47 |
| Msa1093530 | Msa1343260 | 0.849984 | 2.276566e-60 | -8.615850e-47 |
| Msa1101600 | Msa1343260 | 0.828684 | 7.841998e-55 | -8.615850e-47 |
| Msa1104140 | Msa1343260 | 0.866218 | 3.348302e-65 | -8.615850e-47 |
| Msa1104210 | Msa1343260 | 0.864872 | 8.896264e-65 | -8.615850e-47 |
| Msa1105460 | Msa1343260 | 0.806444 | 8.201353e-50 | -8.615850e-47 |
| Msa0244780 | Msa1343260 | 0.837634 | 4.629851e-57 | -8.615850e-47 |
| Msa0250820 | Msa1343260 | 0.858428 | 8.292021e-63 | -8.615850e-47 |
| Msa0250870 | Msa1343260 | 0.828873 | 7.058717e-55 | -8.615850e-47 |
| Msa0257450 | Msa1343260 | 0.847166 | 1.373154e-59 | -8.615850e-47 |
| Msa0258850 | Msa1343260 | 0.818359 | 2.043029e-52 | -8.615850e-47 |
| Msa0262480 | Msa1343260 | 0.830501 | 2.834309e-55 | -8.615850e-47 |
| Msa0264010 | Msa1343260 | 0.833449 | 5.298141e-56 | -8.615850e-47 |
| Msa0268130 | Msa1343260 | 0.828833 | 7.215179e-55 | -8.615850e-47 |
| Msa0270210 | Msa1343260 | 0.822638 | 2.128049e-53 | -8.615850e-47 |
| Msa0280610 | Msa1343260 | 0.833311 | 5.736047e-56 | -8.615850e-47 |
| Msa0289580 | Msa1343260 | 0.867009 | 1.876533e-65 | -8.615850e-47 |
| Msa0289610 | Msa1343260 | 0.866754 | 2.261614e-65 | -8.615850e-47 |
| Msa0296720 | Msa1343260 | 0.820619 | 6.232150e-53 | -8.615850e-47 |
| Msa0298200 | Msa1343260 | 0.812035 | 5.191475e-51 | -8.615850e-47 |
| Msa0298990 | Msa1343260 | 0.836167 | 1.096852e-56 | -8.615850e-47 |
| Msa0300350 | Msa1343260 | 0.829199 | 5.884147e-55 | -8.615850e-47 |
| Msa0305780 | Msa1343260 | 0.809138 | 2.194141e-50 | -8.615850e-47 |
| Msa0306690 | Msa1343260 | 0.811133 | 8.152985e-51 | -8.615850e-47 |
| Msa0307850 | Msa1343260 | 0.842622 | 2.310822e-58 | -8.615850e-47 |
| Msa0317910 | Msa1343260 | 0.833750 | 4.457641e-56 | -8.615850e-47 |
| Msa0327300 | Msa1343260 | 0.863918 | 1.765926e-64 | -8.615850e-47 |
| Msa0327330 | Msa1343260 | 0.855030 | 8.290377e-62 | -8.615850e-47 |
| Msa0336010 | Msa1343260 | 0.862994 | 3.416188e-64 | -8.615850e-47 |
| Msa0339500 | Msa1343260 | 0.808709 | 2.711121e-50 | -8.615850e-47 |
| Msa0348830 | Msa1343260 | 0.870946 | 9.933899e-67 | -8.615850e-47 |
| Msa0348990 | Msa1343260 | 0.825251 | 5.190751e-54 | -8.615850e-47 |
| Msa0357900 | Msa1343260 | 0.824070 | 9.848683e-54 | -8.615850e-47 |
| Msa1120790 | Msa1343260 | 0.814044 | 1.882722e-51 | -8.615850e-47 |
| Msa1124070 | Msa1343260 | 0.801158 | 1.027611e-48 | -8.615850e-47 |
| Msa1125860 | Msa1343260 | 0.809471 | 1.861912e-50 | -8.615850e-47 |
| Msa1126060 | Msa1343260 | 0.803428 | 3.503092e-49 | -8.615850e-47 |
| Msa1126510 | Msa1343260 | 0.868126 | 8.228910e-66 | -8.615850e-47 |
| Msa1126770 | Msa1343260 | 0.801875 | 7.324430e-49 | -8.615850e-47 |
| Msa1126830 | Msa1343260 | 0.887672 | 1.162012e-72 | -8.615850e-47 |
| Msa1127590 | Msa1343260 | 0.803183 | 3.935943e-49 | -8.615850e-47 |
| Msa1128600 | Msa1343260 | 0.811697 | 6.148755e-51 | -8.615850e-47 |
| Msa1148910 | Msa1343260 | 0.828627 | 8.093308e-55 | -8.615850e-47 |
| Msa1165780 | Msa1343260 | 0.848451 | 6.079304e-60 | -8.615850e-47 |
| Msa1165940 | Msa1343260 | 0.874088 | 8.871937e-68 | -8.615850e-47 |
| Msa1166860 | Msa1343260 | 0.862566 | 4.629301e-64 | -8.615850e-47 |
| Msa1166870 | Msa1343260 | 0.822997 | 1.755681e-53 | -8.615850e-47 |
| Msa1169180 | Msa1343260 | 0.833339 | 5.646238e-56 | -8.615850e-47 |
| Msa1174780 | Msa1343260 | 0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa1207270 | Msa1343260 | 0.816532 | 5.267184e-52 | -8.615850e-47 |
| Msa1208020 | Msa1343260 | 0.843804 | 1.118726e-58 | -8.615850e-47 |
| Msa1215820 | Msa1343260 | 0.882457 | 1.025213e-70 | -8.615850e-47 |
| Msa1218600 | Msa1343260 | 0.855069 | 8.076656e-62 | -8.615850e-47 |
| Msa0488820 | Msa1343260 | 0.804118 | 2.518228e-49 | -8.615850e-47 |
| Msa0497490 | Msa1343260 | 0.811633 | 6.350505e-51 | -8.615850e-47 |
| Msa0518390 | Msa1343260 | 0.811153 | 8.071378e-51 | -8.615850e-47 |
| Msa0521050 | Msa1343260 | 0.859598 | 3.702761e-63 | -8.615850e-47 |
| Msa0524500 | Msa1343260 | 0.822708 | 2.050526e-53 | -8.615850e-47 |
| Msa0526540 | Msa1343260 | 0.859539 | 3.856713e-63 | -8.615850e-47 |
| Msa0527020 | Msa1343260 | 0.804765 | 1.845880e-49 | -8.615850e-47 |
| Msa0527150 | Msa1343260 | 0.832452 | 9.378227e-56 | -8.615850e-47 |
| Msa0531650 | Msa1343260 | 0.858749 | 6.651127e-63 | -8.615850e-47 |
| Msa0534750 | Msa1343260 | 0.828311 | 9.648193e-55 | -8.615850e-47 |
| Msa0571920 | Msa1343260 | 0.822153 | 2.758034e-53 | -8.615850e-47 |
| Msa0576940 | Msa1343260 | 0.849030 | 4.199444e-60 | -8.615850e-47 |
| Msa0581070 | Msa1343260 | 0.805806 | 1.117481e-49 | -8.615850e-47 |
| Msa0581110 | Msa1343260 | 0.888900 | 3.917597e-73 | -8.615850e-47 |
| Msa0584030 | Msa1343260 | 0.801059 | 1.076611e-48 | -8.615850e-47 |
| Msa0584260 | Msa1343260 | 0.816784 | 4.625450e-52 | -8.615850e-47 |
| Msa0588360 | Msa1343260 | 0.903347 | 3.811585e-79 | -8.615850e-47 |
| Msa0590940 | Msa1343260 | 0.820685 | 6.019940e-53 | -8.615850e-47 |
| Msa0858770 | Msa1343260 | 0.856484 | 3.119430e-62 | -8.615850e-47 |
| Msa0867060 | Msa1343260 | 0.862375 | 5.297512e-64 | -8.615850e-47 |
| Msa0881290 | Msa1343260 | 0.983218 | 3.808834e-157 | -8.615850e-47 |
| Msa0888810 | Msa1343260 | 0.836286 | 1.023060e-56 | -8.615850e-47 |
| Msa0902760 | Msa1343260 | 0.849511 | 3.084719e-60 | -8.615850e-47 |
| Msa0953310 | Msa1343260 | 0.889687 | 1.938211e-73 | -8.615850e-47 |
| Msa0968590 | Msa1343260 | 0.808760 | 2.643162e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343260 | MtrunA17_Chr7g0263251 | 100.000 | 105 | 0 | 0 | 1 | 105 | 1 | 105 | 1.24e-71 | 208 |
| Msa1343260 | MtrunA17_Chr4g0050721 | 100.000 | 105 | 0 | 0 | 1 | 105 | 1 | 105 | 1.24e-71 | 208 |
| Msa1343260 | MtrunA17_Chr2g0278691 | 100.000 | 105 | 0 | 0 | 1 | 105 | 1 | 105 | 1.24e-71 | 208 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343260 | AT3G23390.1 | 92.381 | 105 | 8 | 0 | 1 | 105 | 1 | 105 | 1.05e-66 | 196 |
| Msa1343260 | AT4G14320.1 | 92.381 | 105 | 8 | 0 | 1 | 105 | 1 | 105 | 1.05e-66 | 196 |
| Msa1343260 | AT4G14320.2 | 91.398 | 93 | 8 | 0 | 1 | 93 | 1 | 93 | 3.44e-57 | 174 |
Find 58 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAACTAGTGTGGAATTT+AGG | 0.185779 | tig0006342:+2774 | Msa1343260:three_prime_UTR |
| TCTCTTCTAGGTGGAGAATT+AGG | 0.245518 | tig0006342:+2463 | Msa1343260:exon |
| ATCTTTACCCTTCTTGTATT+GGG | 0.247979 | tig0006342:-1586 | None:intergenic |
| CCATTGTTGTTGAAATGTTT+TGG | 0.281419 | tig0006342:+2511 | Msa1343260:three_prime_UTR |
| TATCTTTACCCTTCTTGTAT+TGG | 0.312780 | tig0006342:-1587 | None:intergenic |
| TGTTGAACACATACGTTTGT+AGG | 0.350422 | tig0006342:+2868 | Msa1343260:three_prime_UTR |
| TTGGGGAAATCAAGGTGATT+GGG | 0.367665 | tig0006342:+2911 | Msa1343260:three_prime_UTR |
| CACATACGTTTGTAGGGAAA+TGG | 0.369110 | tig0006342:+2875 | Msa1343260:three_prime_UTR |
| AAATGGTTTGTGTGTATTGT+TGG | 0.370801 | tig0006342:+2892 | Msa1343260:three_prime_UTR |
| CAAGGGAACTTCTCTCTTCT+AGG | 0.380957 | tig0006342:+2451 | Msa1343260:CDS |
| GATCGCAAACAGTCTGGTTA+TGG | 0.387570 | tig0006342:+1639 | Msa1343260:CDS |
| AATGGTTTGTGTGTATTGTT+GGG | 0.389029 | tig0006342:+2893 | Msa1343260:three_prime_UTR |
| AAAATCATCAAAGGAATTCA+AGG | 0.412835 | tig0006342:-2623 | None:intergenic |
| TGTTCTGAGGTTGCAATGCC+AGG | 0.414173 | tig0006342:+2241 | Msa1343260:CDS |
| CATGGTGACGGCGCGTGGAT+TGG | 0.425073 | tig0006342:-1410 | None:intergenic |
| GTTGGGGAAATCAAGGTGAT+TGG | 0.436724 | tig0006342:+2910 | Msa1343260:three_prime_UTR |
| GCATTCCTTGCTCTTGCAGT+AGG | 0.441918 | tig0006342:-1538 | None:intergenic |
| TTTAAGTTTCTGTGTTAATG+TGG | 0.446453 | tig0006342:+2797 | Msa1343260:three_prime_UTR |
| TGAGATTGGTGGTGATAAGA+AGG | 0.451732 | tig0006342:+2427 | Msa1343260:CDS |
| GGGAAAGTCGGTGATTGAAT+TGG | 0.463252 | tig0006342:+2819 | Msa1343260:three_prime_UTR |
| CGTTACGATCGCAAACAGTC+TGG | 0.464861 | tig0006342:+1633 | Msa1343260:CDS |
| TTAAGTTTCTGTGTTAATGT+GGG | 0.465340 | tig0006342:+2798 | Msa1343260:three_prime_UTR |
| TGTTTCTCAACATGCAATCA+AGG | 0.468902 | tig0006342:+2274 | Msa1343260:CDS |
| GTTGAACACATACGTTTGTA+GGG | 0.478109 | tig0006342:+2869 | Msa1343260:three_prime_UTR |
| TGGGGAAATCAAGGTGATTG+GGG | 0.489090 | tig0006342:+2912 | Msa1343260:three_prime_UTR |
| TCATTTCCTCTAGTTTGTGT+TGG | 0.490345 | tig0006342:+2711 | Msa1343260:three_prime_UTR |
| GTTACCTTCTTGTGAAAGAC+GGG | 0.495280 | tig0006342:-1675 | None:intergenic |
| GAGAAACATGCTTGCAACCC+TGG | 0.514679 | tig0006342:-2259 | None:intergenic |
| GAGATTGGTGGTGATAAGAA+GGG | 0.526133 | tig0006342:+2428 | Msa1343260:CDS |
| GTGTATTGTTGGGGAAATCA+AGG | 0.538232 | tig0006342:+2903 | Msa1343260:three_prime_UTR |
| CAAGGTTACCCAATACAAGA+AGG | 0.553515 | tig0006342:+1578 | Msa1343260:CDS |
| CGCAAACAGTCTGGTTATGG+TGG | 0.554816 | tig0006342:+1642 | Msa1343260:CDS |
| TGGTGGTGATAAGAAGGGCA+AGG | 0.556388 | tig0006342:+2433 | Msa1343260:CDS |
| CCAAAACATTTCAACAACAA+TGG | 0.558543 | tig0006342:-2511 | None:intergenic |
| TAAGTTTCTGTGTTAATGTG+GGG | 0.560887 | tig0006342:+2799 | Msa1343260:three_prime_UTR |
| TTTCAATTTACCGAACATTG+TGG | 0.561609 | tig0006342:-2757 | None:intergenic |
| GTTACCGTCTCCACAATGTT+CGG | 0.561933 | tig0006342:+2747 | Msa1343260:three_prime_UTR |
| ATTACCATGGTGACGGCGCG+TGG | 0.569167 | tig0006342:-1415 | None:intergenic |
| AAAGATAGCATCGCCGCTCA+AGG | 0.571046 | tig0006342:+1603 | Msa1343260:CDS |
| AGTTACCTTCTTGTGAAAGA+CGG | 0.572609 | tig0006342:-1676 | None:intergenic |
| CAAGAAGCATACACTTCACA+AGG | 0.596444 | tig0006342:+1560 | Msa1343260:CDS |
| TGTGTTAATGTGGGGAAAGT+CGG | 0.596962 | tig0006342:+2807 | Msa1343260:three_prime_UTR |
| AAAATGGAGCGATGAAGCAA+TGG | 0.600572 | tig0006342:-1357 | None:intergenic |
| TTTACCGAACATTGTGGAGA+CGG | 0.600929 | tig0006342:-2751 | None:intergenic |
| GAAAACCTACTGCAAGAGCA+AGG | 0.601503 | tig0006342:+1533 | Msa1343260:CDS |
| CAATCCACGCGCCGTCACCA+TGG | 0.602128 | tig0006342:+1411 | Msa1343260:exon |
| CCACTAAGAAAATTGTTCTG+AGG | 0.602363 | tig0006342:+2228 | Msa1343260:CDS |
| TAAGCCCGTCTTTCACAAGA+AGG | 0.606865 | tig0006342:+1671 | Msa1343260:CDS |
| ATGGTTTGTGTGTATTGTTG+GGG | 0.618518 | tig0006342:+2894 | Msa1343260:three_prime_UTR |
| TCGGTAAATTGAAACTAGTG+TGG | 0.628118 | tig0006342:+2766 | Msa1343260:three_prime_UTR |
| AAGGTTACCCAATACAAGAA+GGG | 0.630634 | tig0006342:+1579 | Msa1343260:CDS |
| GGTGGTGATAAGAAGGGCAA+GGG | 0.630826 | tig0006342:+2434 | Msa1343260:CDS |
| GTAACGACGCTTACCTTGAG+CGG | 0.638526 | tig0006342:-1616 | None:intergenic |
| GTTCTGAGGTTGCAATGCCA+GGG | 0.641034 | tig0006342:+2242 | Msa1343260:CDS |
| GGAGATGATTACCATGGTGA+CGG | 0.643982 | tig0006342:-1422 | None:intergenic |
| GGGAACTTCTCTCTTCTAGG+TGG | 0.678633 | tig0006342:+2454 | Msa1343260:exon |
| TTAACACCAACACAAACTAG+AGG | 0.679173 | tig0006342:-2717 | None:intergenic |
| GCGCGTGGATTGGATCTGAG+AGG | 0.710537 | tig0006342:-1400 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAATCTTTTATCATT+TGG | + | tig0006342:2643-2662 | Msa1343260:three_prime_UTR | 10.0% |
| !!! | TTAAAAATCTTTTATCATTT+GGG | + | tig0006342:2644-2663 | Msa1343260:three_prime_UTR | 10.0% |
| !!! | TTTAAAAATCTTTTATCATT+TGG | + | tig0006342:2643-2662 | Msa1343260:three_prime_UTR | 10.0% |
| !!! | TTAAAAATCTTTTATCATTT+GGG | + | tig0006342:2644-2663 | Msa1343260:three_prime_UTR | 10.0% |
| !!! | TTGATTTTTTTTTAGTTGAA+TGG | + | tig0006342:2155-2174 | Msa1343260:intron | 15.0% |
| !!! | ATTTAATTTTTGTTTGTGTT+TGG | + | tig0006342:2185-2204 | Msa1343260:intron | 15.0% |
| !!! | AAGATTTTTAAAATCATCAA+AGG | - | tig0006342:2635-2654 | None:intergenic | 15.0% |
| !!! | ATCTAATTTTATCATAACAA+TGG | - | tig0006342:2685-2704 | None:intergenic | 15.0% |
| !!! | TTGATTTTTTTTTAGTTGAA+TGG | + | tig0006342:2155-2174 | Msa1343260:intron | 15.0% |
| !!! | ATTTAATTTTTGTTTGTGTT+TGG | + | tig0006342:2185-2204 | Msa1343260:intron | 15.0% |
| !!! | AAGATTTTTAAAATCATCAA+AGG | - | tig0006342:2635-2654 | None:intergenic | 15.0% |
| !!! | ATCTAATTTTATCATAACAA+TGG | - | tig0006342:2685-2704 | None:intergenic | 15.0% |
| !! | AAATGTATAAAAGTAATGAG+GGG | - | tig0006342:1713-1732 | None:intergenic | 20.0% |
| !! | GAAATGTATAAAAGTAATGA+GGG | - | tig0006342:1714-1733 | None:intergenic | 20.0% |
| !! | TGAAATGTATAAAAGTAATG+AGG | - | tig0006342:1715-1734 | None:intergenic | 20.0% |
| !! | CTTACAATCAACTAAAAAAA+TGG | - | tig0006342:1757-1776 | None:intergenic | 20.0% |
| !! | GAATGCAAAAAATTCAAATT+TGG | + | tig0006342:2080-2099 | Msa1343260:intron | 20.0% |
| !!! | CAGAAATTTTATTTTGTAGA+TGG | + | tig0006342:2336-2355 | Msa1343260:intron | 20.0% |
| !!! | TTTTATTTTGTAGATGGATA+TGG | + | tig0006342:2342-2361 | Msa1343260:intron | 20.0% |
| !! | AAATGTATAAAAGTAATGAG+GGG | - | tig0006342:1713-1732 | None:intergenic | 20.0% |
| !! | GAAATGTATAAAAGTAATGA+GGG | - | tig0006342:1714-1733 | None:intergenic | 20.0% |
| !! | TGAAATGTATAAAAGTAATG+AGG | - | tig0006342:1715-1734 | None:intergenic | 20.0% |
| !! | CTTACAATCAACTAAAAAAA+TGG | - | tig0006342:1757-1776 | None:intergenic | 20.0% |
| !! | GAATGCAAAAAATTCAAATT+TGG | + | tig0006342:2080-2099 | Msa1343260:intron | 20.0% |
| !!! | CAGAAATTTTATTTTGTAGA+TGG | + | tig0006342:2336-2355 | Msa1343260:intron | 20.0% |
| !!! | TTTTATTTTGTAGATGGATA+TGG | + | tig0006342:2342-2361 | Msa1343260:intron | 20.0% |
| ! | TGATATAATTACGATTACGT+AGG | - | tig0006342:1460-1479 | None:intergenic | 25.0% |
| ! | GAAAATCCAACATCAAAAAA+GGG | - | tig0006342:1491-1510 | None:intergenic | 25.0% |
| ! | TGAAAATCCAACATCAAAAA+AGG | - | tig0006342:1492-1511 | None:intergenic | 25.0% |
| !!! | TTTTTTGATGTTGGATTTTC+AGG | + | tig0006342:1491-1510 | Msa1343260:intron | 25.0% |
| ! | AATGTATAAAAGTAATGAGG+GGG | - | tig0006342:1712-1731 | None:intergenic | 25.0% |
| !!! | TTAGCTTTATGCAAATGATT+AGG | + | tig0006342:1837-1856 | Msa1343260:intron | 25.0% |
| !!! | TAGCTTTATGCAAATGATTA+GGG | + | tig0006342:1838-1857 | Msa1343260:intron | 25.0% |
| ! | TGGATTCAAATATGGTTAAT+AGG | + | tig0006342:1881-1900 | Msa1343260:intron | 25.0% |
| !!! | TGTGTTTGGTTTTATTGTAT+AGG | + | tig0006342:2199-2218 | Msa1343260:intron | 25.0% |
| ! | ATATGGTTGTTTGTATCTAA+TGG | + | tig0006342:2359-2378 | Msa1343260:intron | 25.0% |
| ! | AAAATCATCAAAGGAATTCA+AGG | - | tig0006342:2626-2645 | None:intergenic | 25.0% |
| !! | TTTAAGTTTCTGTGTTAATG+TGG | + | tig0006342:2797-2816 | Msa1343260:three_prime_UTR | 25.0% |
| ! | TTAAGTTTCTGTGTTAATGT+GGG | + | tig0006342:2798-2817 | Msa1343260:three_prime_UTR | 25.0% |
| ! | TGATATAATTACGATTACGT+AGG | - | tig0006342:1460-1479 | None:intergenic | 25.0% |
| ! | GAAAATCCAACATCAAAAAA+GGG | - | tig0006342:1491-1510 | None:intergenic | 25.0% |
| ! | TGAAAATCCAACATCAAAAA+AGG | - | tig0006342:1492-1511 | None:intergenic | 25.0% |
| !!! | TTTTTTGATGTTGGATTTTC+AGG | + | tig0006342:1491-1510 | Msa1343260:intron | 25.0% |
| ! | AATGTATAAAAGTAATGAGG+GGG | - | tig0006342:1712-1731 | None:intergenic | 25.0% |
| !!! | TTAGCTTTATGCAAATGATT+AGG | + | tig0006342:1837-1856 | Msa1343260:intron | 25.0% |
| !!! | TAGCTTTATGCAAATGATTA+GGG | + | tig0006342:1838-1857 | Msa1343260:intron | 25.0% |
| ! | TGGATTCAAATATGGTTAAT+AGG | + | tig0006342:1881-1900 | Msa1343260:intron | 25.0% |
| !!! | TGTGTTTGGTTTTATTGTAT+AGG | + | tig0006342:2199-2218 | Msa1343260:intron | 25.0% |
| ! | ATATGGTTGTTTGTATCTAA+TGG | + | tig0006342:2359-2378 | Msa1343260:intron | 25.0% |
| ! | AAAATCATCAAAGGAATTCA+AGG | - | tig0006342:2626-2645 | None:intergenic | 25.0% |
| !! | TTTAAGTTTCTGTGTTAATG+TGG | + | tig0006342:2797-2816 | Msa1343260:three_prime_UTR | 25.0% |
| ! | TTAAGTTTCTGTGTTAATGT+GGG | + | tig0006342:2798-2817 | Msa1343260:three_prime_UTR | 25.0% |
| !! | AAGCAATGGTTTGTGTTTTA+TGG | - | tig0006342:1346-1365 | None:intergenic | 30.0% |
| ATCTTTACCCTTCTTGTATT+GGG | - | tig0006342:1589-1608 | None:intergenic | 30.0% | |
| TATCTTTACCCTTCTTGTAT+TGG | - | tig0006342:1590-1609 | None:intergenic | 30.0% | |
| GGTTAATAGGAAGAACATTA+TGG | + | tig0006342:1894-1913 | Msa1343260:intron | 30.0% | |
| ! | TTTTGAGCTGAATGTGAAAT+TGG | + | tig0006342:1993-2012 | Msa1343260:intron | 30.0% |
| CCAAAACATTTCAACAACAA+TGG | - | tig0006342:2514-2533 | None:intergenic | 30.0% | |
| !! | CCATTGTTGTTGAAATGTTT+TGG | + | tig0006342:2511-2530 | Msa1343260:three_prime_UTR | 30.0% |
| !!! | TGAAATGTTTTGGTTCTCTA+TGG | + | tig0006342:2521-2540 | Msa1343260:three_prime_UTR | 30.0% |
| TTTCAATTTACCGAACATTG+TGG | - | tig0006342:2760-2779 | None:intergenic | 30.0% | |
| TTGAAACTAGTGTGGAATTT+AGG | + | tig0006342:2774-2793 | Msa1343260:three_prime_UTR | 30.0% | |
| TAAGTTTCTGTGTTAATGTG+GGG | + | tig0006342:2799-2818 | Msa1343260:three_prime_UTR | 30.0% | |
| ! | AAATGGTTTGTGTGTATTGT+TGG | + | tig0006342:2892-2911 | Msa1343260:three_prime_UTR | 30.0% |
| ! | AATGGTTTGTGTGTATTGTT+GGG | + | tig0006342:2893-2912 | Msa1343260:three_prime_UTR | 30.0% |
| !! | AAGCAATGGTTTGTGTTTTA+TGG | - | tig0006342:1346-1365 | None:intergenic | 30.0% |
| ATCTTTACCCTTCTTGTATT+GGG | - | tig0006342:1589-1608 | None:intergenic | 30.0% | |
| TATCTTTACCCTTCTTGTAT+TGG | - | tig0006342:1590-1609 | None:intergenic | 30.0% | |
| GGTTAATAGGAAGAACATTA+TGG | + | tig0006342:1894-1913 | Msa1343260:intron | 30.0% | |
| ! | TTTTGAGCTGAATGTGAAAT+TGG | + | tig0006342:1993-2012 | Msa1343260:intron | 30.0% |
| CCAAAACATTTCAACAACAA+TGG | - | tig0006342:2514-2533 | None:intergenic | 30.0% | |
| !! | CCATTGTTGTTGAAATGTTT+TGG | + | tig0006342:2511-2530 | Msa1343260:three_prime_UTR | 30.0% |
| !!! | TGAAATGTTTTGGTTCTCTA+TGG | + | tig0006342:2521-2540 | Msa1343260:three_prime_UTR | 30.0% |
| TTTCAATTTACCGAACATTG+TGG | - | tig0006342:2760-2779 | None:intergenic | 30.0% | |
| TTGAAACTAGTGTGGAATTT+AGG | + | tig0006342:2774-2793 | Msa1343260:three_prime_UTR | 30.0% | |
| TAAGTTTCTGTGTTAATGTG+GGG | + | tig0006342:2799-2818 | Msa1343260:three_prime_UTR | 30.0% | |
| ! | AAATGGTTTGTGTGTATTGT+TGG | + | tig0006342:2892-2911 | Msa1343260:three_prime_UTR | 30.0% |
| ! | AATGGTTTGTGTGTATTGTT+GGG | + | tig0006342:2893-2912 | Msa1343260:three_prime_UTR | 30.0% |
| !!! | GCTAAACCCTTTTTTGATGT+TGG | + | tig0006342:1482-1501 | Msa1343260:intron | 35.0% |
| ! | CAGTAGGTTTTCTTTGTCTT+TGG | - | tig0006342:1525-1544 | None:intergenic | 35.0% |
| AAGGTTACCCAATACAAGAA+GGG | + | tig0006342:1579-1598 | Msa1343260:CDS | 35.0% | |
| AGTTACCTTCTTGTGAAAGA+CGG | - | tig0006342:1679-1698 | None:intergenic | 35.0% | |
| AGGGAAGATTTAGAGATTGA+TGG | + | tig0006342:1857-1876 | Msa1343260:intron | 35.0% | |
| ! | AAGATTTAGAGATTGATGGC+TGG | + | tig0006342:1861-1880 | Msa1343260:intron | 35.0% |
| ! | TTGATGGCTGGATTCAAATA+TGG | + | tig0006342:1873-1892 | Msa1343260:intron | 35.0% |
| ! | CTTATATCACTAAGTGGGTT+TGG | - | tig0006342:1939-1958 | None:intergenic | 35.0% |
| CAAACCCACTTAGTGATATA+AGG | + | tig0006342:1937-1956 | Msa1343260:intron | 35.0% | |
| ! | CAAGCCTTATATCACTAAGT+GGG | - | tig0006342:1944-1963 | None:intergenic | 35.0% |
| ! | CCTCAGAACAATTTTCTTAG+TGG | - | tig0006342:2231-2250 | None:intergenic | 35.0% |
| CCACTAAGAAAATTGTTCTG+AGG | + | tig0006342:2228-2247 | Msa1343260:CDS | 35.0% | |
| TGTTTCTCAACATGCAATCA+AGG | + | tig0006342:2274-2293 | Msa1343260:CDS | 35.0% | |
| ! | TCATTTCCTCTAGTTTGTGT+TGG | + | tig0006342:2711-2730 | Msa1343260:three_prime_UTR | 35.0% |
| TTAACACCAACACAAACTAG+AGG | - | tig0006342:2720-2739 | None:intergenic | 35.0% | |
| TCGGTAAATTGAAACTAGTG+TGG | + | tig0006342:2766-2785 | Msa1343260:three_prime_UTR | 35.0% | |
| TGTTGAACACATACGTTTGT+AGG | + | tig0006342:2868-2887 | Msa1343260:three_prime_UTR | 35.0% | |
| GTTGAACACATACGTTTGTA+GGG | + | tig0006342:2869-2888 | Msa1343260:three_prime_UTR | 35.0% | |
| ! | ATGGTTTGTGTGTATTGTTG+GGG | + | tig0006342:2894-2913 | Msa1343260:three_prime_UTR | 35.0% |
| !!! | GCTAAACCCTTTTTTGATGT+TGG | + | tig0006342:1482-1501 | Msa1343260:intron | 35.0% |
| ! | CAGTAGGTTTTCTTTGTCTT+TGG | - | tig0006342:1525-1544 | None:intergenic | 35.0% |
| AAGGTTACCCAATACAAGAA+GGG | + | tig0006342:1579-1598 | Msa1343260:CDS | 35.0% | |
| AGTTACCTTCTTGTGAAAGA+CGG | - | tig0006342:1679-1698 | None:intergenic | 35.0% | |
| AGGGAAGATTTAGAGATTGA+TGG | + | tig0006342:1857-1876 | Msa1343260:intron | 35.0% | |
| ! | AAGATTTAGAGATTGATGGC+TGG | + | tig0006342:1861-1880 | Msa1343260:intron | 35.0% |
| ! | TTGATGGCTGGATTCAAATA+TGG | + | tig0006342:1873-1892 | Msa1343260:intron | 35.0% |
| ! | CTTATATCACTAAGTGGGTT+TGG | - | tig0006342:1939-1958 | None:intergenic | 35.0% |
| CAAACCCACTTAGTGATATA+AGG | + | tig0006342:1937-1956 | Msa1343260:intron | 35.0% | |
| ! | CAAGCCTTATATCACTAAGT+GGG | - | tig0006342:1944-1963 | None:intergenic | 35.0% |
| ! | CCTCAGAACAATTTTCTTAG+TGG | - | tig0006342:2231-2250 | None:intergenic | 35.0% |
| CCACTAAGAAAATTGTTCTG+AGG | + | tig0006342:2228-2247 | Msa1343260:CDS | 35.0% | |
| TGTTTCTCAACATGCAATCA+AGG | + | tig0006342:2274-2293 | Msa1343260:CDS | 35.0% | |
| ! | TCATTTCCTCTAGTTTGTGT+TGG | + | tig0006342:2711-2730 | Msa1343260:three_prime_UTR | 35.0% |
| TTAACACCAACACAAACTAG+AGG | - | tig0006342:2720-2739 | None:intergenic | 35.0% | |
| TCGGTAAATTGAAACTAGTG+TGG | + | tig0006342:2766-2785 | Msa1343260:three_prime_UTR | 35.0% | |
| TGTTGAACACATACGTTTGT+AGG | + | tig0006342:2868-2887 | Msa1343260:three_prime_UTR | 35.0% | |
| GTTGAACACATACGTTTGTA+GGG | + | tig0006342:2869-2888 | Msa1343260:three_prime_UTR | 35.0% | |
| ! | ATGGTTTGTGTGTATTGTTG+GGG | + | tig0006342:2894-2913 | Msa1343260:three_prime_UTR | 35.0% |
| AAAATGGAGCGATGAAGCAA+TGG | - | tig0006342:1360-1379 | None:intergenic | 40.0% | |
| !! | AGTTTTGTGCGCAGTGAAAA+TGG | - | tig0006342:1376-1395 | None:intergenic | 40.0% |
| ! | CAAGAAGCATACACTTCACA+AGG | + | tig0006342:1560-1579 | Msa1343260:CDS | 40.0% |
| CAAGGTTACCCAATACAAGA+AGG | + | tig0006342:1578-1597 | Msa1343260:CDS | 40.0% | |
| GTTACCTTCTTGTGAAAGAC+GGG | - | tig0006342:1678-1697 | None:intergenic | 40.0% | |
| ! | CCAAGCCTTATATCACTAAG+TGG | - | tig0006342:1945-1964 | None:intergenic | 40.0% |
| CCACTTAGTGATATAAGGCT+TGG | + | tig0006342:1942-1961 | Msa1343260:intron | 40.0% | |
| ! | GTTGTGTTTCTGTTATGCAG+AGG | + | tig0006342:2393-2412 | Msa1343260:intron | 40.0% |
| !!! | AGGTGCAAGCATTTTGAGAT+TGG | + | tig0006342:2413-2432 | Msa1343260:CDS | 40.0% |
| !!! | TGCAAGCATTTTGAGATTGG+TGG | + | tig0006342:2416-2435 | Msa1343260:CDS | 40.0% |
| !! | TGAGATTGGTGGTGATAAGA+AGG | + | tig0006342:2427-2446 | Msa1343260:CDS | 40.0% |
| !! | GAGATTGGTGGTGATAAGAA+GGG | + | tig0006342:2428-2447 | Msa1343260:CDS | 40.0% |
| TCTCTTCTAGGTGGAGAATT+AGG | + | tig0006342:2463-2482 | Msa1343260:exon | 40.0% | |
| TTTACCGAACATTGTGGAGA+CGG | - | tig0006342:2754-2773 | None:intergenic | 40.0% | |
| TGTGTTAATGTGGGGAAAGT+CGG | + | tig0006342:2807-2826 | Msa1343260:three_prime_UTR | 40.0% | |
| CACATACGTTTGTAGGGAAA+TGG | + | tig0006342:2875-2894 | Msa1343260:three_prime_UTR | 40.0% | |
| GTGTATTGTTGGGGAAATCA+AGG | + | tig0006342:2903-2922 | Msa1343260:three_prime_UTR | 40.0% | |
| TTGGGGAAATCAAGGTGATT+GGG | + | tig0006342:2911-2930 | Msa1343260:three_prime_UTR | 40.0% | |
| AAAATGGAGCGATGAAGCAA+TGG | - | tig0006342:1360-1379 | None:intergenic | 40.0% | |
| !! | AGTTTTGTGCGCAGTGAAAA+TGG | - | tig0006342:1376-1395 | None:intergenic | 40.0% |
| ! | CAAGAAGCATACACTTCACA+AGG | + | tig0006342:1560-1579 | Msa1343260:CDS | 40.0% |
| CAAGGTTACCCAATACAAGA+AGG | + | tig0006342:1578-1597 | Msa1343260:CDS | 40.0% | |
| GTTACCTTCTTGTGAAAGAC+GGG | - | tig0006342:1678-1697 | None:intergenic | 40.0% | |
| ! | CCAAGCCTTATATCACTAAG+TGG | - | tig0006342:1945-1964 | None:intergenic | 40.0% |
| CCACTTAGTGATATAAGGCT+TGG | + | tig0006342:1942-1961 | Msa1343260:intron | 40.0% | |
| ! | GTTGTGTTTCTGTTATGCAG+AGG | + | tig0006342:2393-2412 | Msa1343260:intron | 40.0% |
| !!! | AGGTGCAAGCATTTTGAGAT+TGG | + | tig0006342:2413-2432 | Msa1343260:CDS | 40.0% |
| !!! | TGCAAGCATTTTGAGATTGG+TGG | + | tig0006342:2416-2435 | Msa1343260:CDS | 40.0% |
| !! | TGAGATTGGTGGTGATAAGA+AGG | + | tig0006342:2427-2446 | Msa1343260:CDS | 40.0% |
| !! | GAGATTGGTGGTGATAAGAA+GGG | + | tig0006342:2428-2447 | Msa1343260:CDS | 40.0% |
| TCTCTTCTAGGTGGAGAATT+AGG | + | tig0006342:2463-2482 | Msa1343260:exon | 40.0% | |
| TTTACCGAACATTGTGGAGA+CGG | - | tig0006342:2754-2773 | None:intergenic | 40.0% | |
| TGTGTTAATGTGGGGAAAGT+CGG | + | tig0006342:2807-2826 | Msa1343260:three_prime_UTR | 40.0% | |
| CACATACGTTTGTAGGGAAA+TGG | + | tig0006342:2875-2894 | Msa1343260:three_prime_UTR | 40.0% | |
| GTGTATTGTTGGGGAAATCA+AGG | + | tig0006342:2903-2922 | Msa1343260:three_prime_UTR | 40.0% | |
| TTGGGGAAATCAAGGTGATT+GGG | + | tig0006342:2911-2930 | Msa1343260:three_prime_UTR | 40.0% | |
| GGAGATGATTACCATGGTGA+CGG | - | tig0006342:1425-1444 | None:intergenic | 45.0% | |
| CGATTACGTAGGAACAGACA+CGG | - | tig0006342:1449-1468 | None:intergenic | 45.0% | |
| GAAAACCTACTGCAAGAGCA+AGG | + | tig0006342:1533-1552 | Msa1343260:CDS | 45.0% | |
| GATCGCAAACAGTCTGGTTA+TGG | + | tig0006342:1639-1658 | Msa1343260:CDS | 45.0% | |
| TAAGCCCGTCTTTCACAAGA+AGG | + | tig0006342:1671-1690 | Msa1343260:CDS | 45.0% | |
| AAGTAATGAGGGGGTGAAGT+GGG | - | tig0006342:1703-1722 | None:intergenic | 45.0% | |
| AAAGTAATGAGGGGGTGAAG+TGG | - | tig0006342:1704-1723 | None:intergenic | 45.0% | |
| CAAGGGAACTTCTCTCTTCT+AGG | + | tig0006342:2451-2470 | Msa1343260:CDS | 45.0% | |
| GTTACCGTCTCCACAATGTT+CGG | + | tig0006342:2747-2766 | Msa1343260:three_prime_UTR | 45.0% | |
| GGGAAAGTCGGTGATTGAAT+TGG | + | tig0006342:2819-2838 | Msa1343260:three_prime_UTR | 45.0% | |
| GTTGGGGAAATCAAGGTGAT+TGG | + | tig0006342:2910-2929 | Msa1343260:three_prime_UTR | 45.0% | |
| TGGGGAAATCAAGGTGATTG+GGG | + | tig0006342:2912-2931 | Msa1343260:three_prime_UTR | 45.0% | |
| GGAGATGATTACCATGGTGA+CGG | - | tig0006342:1425-1444 | None:intergenic | 45.0% | |
| CGATTACGTAGGAACAGACA+CGG | - | tig0006342:1449-1468 | None:intergenic | 45.0% | |
| GAAAACCTACTGCAAGAGCA+AGG | + | tig0006342:1533-1552 | Msa1343260:CDS | 45.0% | |
| GATCGCAAACAGTCTGGTTA+TGG | + | tig0006342:1639-1658 | Msa1343260:CDS | 45.0% | |
| TAAGCCCGTCTTTCACAAGA+AGG | + | tig0006342:1671-1690 | Msa1343260:CDS | 45.0% | |
| AAGTAATGAGGGGGTGAAGT+GGG | - | tig0006342:1703-1722 | None:intergenic | 45.0% | |
| AAAGTAATGAGGGGGTGAAG+TGG | - | tig0006342:1704-1723 | None:intergenic | 45.0% | |
| CAAGGGAACTTCTCTCTTCT+AGG | + | tig0006342:2451-2470 | Msa1343260:CDS | 45.0% | |
| GTTACCGTCTCCACAATGTT+CGG | + | tig0006342:2747-2766 | Msa1343260:three_prime_UTR | 45.0% | |
| GGGAAAGTCGGTGATTGAAT+TGG | + | tig0006342:2819-2838 | Msa1343260:three_prime_UTR | 45.0% | |
| GTTGGGGAAATCAAGGTGAT+TGG | + | tig0006342:2910-2929 | Msa1343260:three_prime_UTR | 45.0% | |
| CACGGTGGAGATGATTACCA+TGG | - | tig0006342:1431-1450 | None:intergenic | 50.0% | |
| TTACGTAGGAACAGACACGG+TGG | - | tig0006342:1446-1465 | None:intergenic | 50.0% | |
| GCATTCCTTGCTCTTGCAGT+AGG | - | tig0006342:1541-1560 | None:intergenic | 50.0% | |
| AAAGATAGCATCGCCGCTCA+AGG | + | tig0006342:1603-1622 | Msa1343260:CDS | 50.0% | |
| GTAACGACGCTTACCTTGAG+CGG | - | tig0006342:1619-1638 | None:intergenic | 50.0% | |
| CGTTACGATCGCAAACAGTC+TGG | + | tig0006342:1633-1652 | Msa1343260:CDS | 50.0% | |
| CGCAAACAGTCTGGTTATGG+TGG | + | tig0006342:1642-1661 | Msa1343260:CDS | 50.0% | |
| !! | TGTTCTGAGGTTGCAATGCC+AGG | + | tig0006342:2241-2260 | Msa1343260:CDS | 50.0% |
| !! | GTTCTGAGGTTGCAATGCCA+GGG | + | tig0006342:2242-2261 | Msa1343260:CDS | 50.0% |
| GAGAAACATGCTTGCAACCC+TGG | - | tig0006342:2262-2281 | None:intergenic | 50.0% | |
| ! | TGGTGGTGATAAGAAGGGCA+AGG | + | tig0006342:2433-2452 | Msa1343260:CDS | 50.0% |
| GGTGGTGATAAGAAGGGCAA+GGG | + | tig0006342:2434-2453 | Msa1343260:CDS | 50.0% | |
| GGGAACTTCTCTCTTCTAGG+TGG | + | tig0006342:2454-2473 | Msa1343260:exon | 50.0% | |
| CACGGTGGAGATGATTACCA+TGG | - | tig0006342:1431-1450 | None:intergenic | 50.0% | |
| TTACGTAGGAACAGACACGG+TGG | - | tig0006342:1446-1465 | None:intergenic | 50.0% | |
| GCATTCCTTGCTCTTGCAGT+AGG | - | tig0006342:1541-1560 | None:intergenic | 50.0% | |
| AAAGATAGCATCGCCGCTCA+AGG | + | tig0006342:1603-1622 | Msa1343260:CDS | 50.0% | |
| GTAACGACGCTTACCTTGAG+CGG | - | tig0006342:1619-1638 | None:intergenic | 50.0% | |
| CGTTACGATCGCAAACAGTC+TGG | + | tig0006342:1633-1652 | Msa1343260:CDS | 50.0% | |
| CGCAAACAGTCTGGTTATGG+TGG | + | tig0006342:1642-1661 | Msa1343260:CDS | 50.0% | |
| !! | TGTTCTGAGGTTGCAATGCC+AGG | + | tig0006342:2241-2260 | Msa1343260:CDS | 50.0% |
| !! | GTTCTGAGGTTGCAATGCCA+GGG | + | tig0006342:2242-2261 | Msa1343260:CDS | 50.0% |
| GAGAAACATGCTTGCAACCC+TGG | - | tig0006342:2262-2281 | None:intergenic | 50.0% | |
| ! | TGGTGGTGATAAGAAGGGCA+AGG | + | tig0006342:2433-2452 | Msa1343260:CDS | 50.0% |
| GGTGGTGATAAGAAGGGCAA+GGG | + | tig0006342:2434-2453 | Msa1343260:CDS | 50.0% | |
| GGGAACTTCTCTCTTCTAGG+TGG | + | tig0006342:2454-2473 | Msa1343260:exon | 50.0% | |
| !! | GCGCGTGGATTGGATCTGAG+AGG | - | tig0006342:1403-1422 | None:intergenic | 60.0% |
| !! | ATTACCATGGTGACGGCGCG+TGG | - | tig0006342:1418-1437 | None:intergenic | 60.0% |
| !! | GCGCGTGGATTGGATCTGAG+AGG | - | tig0006342:1403-1422 | None:intergenic | 60.0% |
| !! | ATTACCATGGTGACGGCGCG+TGG | - | tig0006342:1418-1437 | None:intergenic | 60.0% |
| !! | CATGGTGACGGCGCGTGGAT+TGG | - | tig0006342:1413-1432 | None:intergenic | 65.0% |
| CAATCCACGCGCCGTCACCA+TGG | + | tig0006342:1411-1430 | Msa1343260:exon | 65.0% | |
| !! | CATGGTGACGGCGCGTGGAT+TGG | - | tig0006342:1413-1432 | None:intergenic | 65.0% |
| CAATCCACGCGCCGTCACCA+TGG | + | tig0006342:1411-1430 | Msa1343260:exon | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0006342 | gene | 1339 | 2934 | 1339 | ID=Msa1343260;Name=Msa1343260 |
| tig0006342 | mRNA | 1339 | 2934 | 1339 | ID=Msa1343260-mRNA-1;Parent=Msa1343260;Name=Msa1343260-mRNA-1;_AED=0.09;_eAED=0.09;_QI=91|1|1|1|1|1|4|462|105 |
| tig0006342 | exon | 1339 | 1432 | 1339 | ID=Msa1343260-mRNA-1:exon:4077;Parent=Msa1343260-mRNA-1 |
| tig0006342 | exon | 1513 | 1692 | 1513 | ID=Msa1343260-mRNA-1:exon:4078;Parent=Msa1343260-mRNA-1 |
| tig0006342 | exon | 2221 | 2295 | 2221 | ID=Msa1343260-mRNA-1:exon:4079;Parent=Msa1343260-mRNA-1 |
| tig0006342 | exon | 2413 | 2934 | 2413 | ID=Msa1343260-mRNA-1:exon:4080;Parent=Msa1343260-mRNA-1 |
| tig0006342 | five_prime_UTR | 1339 | 1429 | 1339 | ID=Msa1343260-mRNA-1:five_prime_utr;Parent=Msa1343260-mRNA-1 |
| tig0006342 | CDS | 1430 | 1432 | 1430 | ID=Msa1343260-mRNA-1:cds;Parent=Msa1343260-mRNA-1 |
| tig0006342 | CDS | 1513 | 1692 | 1513 | ID=Msa1343260-mRNA-1:cds;Parent=Msa1343260-mRNA-1 |
| tig0006342 | CDS | 2221 | 2295 | 2221 | ID=Msa1343260-mRNA-1:cds;Parent=Msa1343260-mRNA-1 |
| tig0006342 | CDS | 2413 | 2472 | 2413 | ID=Msa1343260-mRNA-1:cds;Parent=Msa1343260-mRNA-1 |
| tig0006342 | three_prime_UTR | 2473 | 2934 | 2473 | ID=Msa1343260-mRNA-1:three_prime_utr;Parent=Msa1343260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
