Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002790 | XP_003609505.1 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 4.49e-112 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002790 | sp|P17093|RS11_SOYBN | 95.000 | 160 | 7 | 1 | 1 | 160 | 1 | 159 | 1.37e-98 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0002790 | 0.984793 | 1.320177e-161 | -8.615850e-47 |
| Msa0002790 | Msa0003780 | 0.856131 | 3.958238e-62 | -8.615850e-47 |
| Msa0002790 | Msa0019390 | 0.807792 | 4.251802e-50 | -8.615850e-47 |
| Msa0002790 | Msa0022970 | 0.900060 | 1.068926e-77 | -8.615850e-47 |
| Msa0002790 | Msa0027260 | 0.857951 | 1.150160e-62 | -8.615850e-47 |
| Msa0002790 | Msa0029180 | 0.802530 | 5.370957e-49 | -8.615850e-47 |
| Msa0002790 | Msa0032780 | 0.811685 | 6.187665e-51 | -8.615850e-47 |
| Msa0002790 | Msa0032810 | 0.812132 | 4.944778e-51 | -8.615850e-47 |
| Msa0002790 | Msa0040690 | 0.831592 | 1.529915e-55 | -8.615850e-47 |
| Msa0002790 | Msa0042280 | 0.856691 | 2.710178e-62 | -8.615850e-47 |
| Msa0002790 | Msa0043660 | 0.817484 | 3.219676e-52 | -8.615850e-47 |
| Msa0002790 | Msa0044890 | 0.830376 | 3.040814e-55 | -8.615850e-47 |
| Msa0002790 | Msa0045730 | 0.880999 | 3.454461e-70 | -8.615850e-47 |
| Msa0002790 | Msa0047160 | 0.841631 | 4.226230e-58 | -8.615850e-47 |
| Msa0002790 | Msa0048180 | 0.867766 | 1.074439e-65 | -8.615850e-47 |
| Msa0002790 | Msa0049370 | 0.817631 | 2.983913e-52 | -8.615850e-47 |
| Msa0002790 | Msa0055180 | 0.822632 | 2.135238e-53 | -8.615850e-47 |
| Msa0002790 | Msa0056470 | 0.821055 | 4.947778e-53 | -8.615850e-47 |
| Msa0002790 | Msa0068970 | 0.824161 | 9.378631e-54 | -8.615850e-47 |
| Msa0002790 | Msa0074030 | 0.878410 | 2.873764e-69 | -8.615850e-47 |
| Msa0002790 | Msa0077530 | 0.834505 | 2.883587e-56 | -8.615850e-47 |
| Msa0002790 | Msa0086750 | 0.899912 | 1.237849e-77 | -8.615850e-47 |
| Msa0002790 | Msa0091880 | 0.826557 | 2.541069e-54 | -8.615850e-47 |
| Msa0002790 | Msa0094470 | 0.835369 | 1.746888e-56 | -8.615850e-47 |
| Msa0002790 | Msa0097580 | 0.828713 | 7.716545e-55 | -8.615850e-47 |
| Msa0002790 | Msa0097600 | 0.831383 | 1.722446e-55 | -8.615850e-47 |
| Msa0002790 | Msa0100740 | 0.824502 | 7.795460e-54 | -8.615850e-47 |
| Msa0002790 | Msa0116130 | 0.879592 | 1.098687e-69 | -8.615850e-47 |
| Msa0002790 | Msa0116670 | 0.901227 | 3.315513e-78 | -8.615850e-47 |
| Msa0002790 | Msa0118710 | 0.900779 | 5.206430e-78 | -8.615850e-47 |
| Msa0002790 | Msa0128860 | 0.872673 | 2.654577e-67 | -8.615850e-47 |
| Msa0002790 | Msa0129660 | 0.807139 | 5.848666e-50 | -8.615850e-47 |
| Msa0002790 | Msa0133540 | 0.919661 | 3.407499e-87 | -8.615850e-47 |
| Msa0002790 | Msa0137550 | 0.806278 | 8.888962e-50 | -8.615850e-47 |
| Msa0002790 | Msa0146340 | 0.880683 | 4.485874e-70 | -8.615850e-47 |
| Msa0002790 | Msa0163760 | 0.854186 | 1.455166e-61 | -8.615850e-47 |
| Msa0002790 | Msa0167480 | 0.858042 | 1.080983e-62 | -8.615850e-47 |
| Msa0002790 | Msa0172900 | 0.812484 | 4.141485e-51 | -8.615850e-47 |
| Msa0002790 | Msa0173530 | 0.902320 | 1.093259e-78 | -8.615850e-47 |
| Msa0002790 | Msa0174730 | 0.871501 | 6.511809e-67 | -8.615850e-47 |
| Msa0002790 | Msa0180020 | 0.806399 | 8.382409e-50 | -8.615850e-47 |
| Msa0002790 | Msa0181490 | 0.910774 | 1.285796e-82 | -8.615850e-47 |
| Msa0002790 | Msa0183090 | 0.830903 | 2.259963e-55 | -8.615850e-47 |
| Msa0002790 | Msa0187930 | 0.860900 | 1.496238e-63 | -8.615850e-47 |
| Msa0002790 | Msa0188350 | 0.814956 | 1.182686e-51 | -8.615850e-47 |
| Msa0002790 | Msa0189300 | 0.811549 | 6.624304e-51 | -8.615850e-47 |
| Msa0002790 | Msa0189700 | 0.869282 | 3.479311e-66 | -8.615850e-47 |
| Msa0002790 | Msa0192230 | 0.801560 | 8.500353e-49 | -8.615850e-47 |
| Msa0002790 | Msa0194540 | 0.852338 | 4.928546e-61 | -8.615850e-47 |
| Msa0002790 | Msa0202020 | 0.801146 | 1.033448e-48 | -8.615850e-47 |
| Msa0002790 | Msa0210330 | 0.814801 | 1.280436e-51 | -8.615850e-47 |
| Msa0002790 | Msa0210360 | 0.867487 | 1.319496e-65 | -8.615850e-47 |
| Msa0002790 | Msa0218830 | 0.882961 | 6.710880e-71 | -8.615850e-47 |
| Msa0002790 | Msa0219120 | 0.860433 | 2.072326e-63 | -8.615850e-47 |
| Msa0002790 | Msa0221030 | 0.887121 | 1.883941e-72 | -8.615850e-47 |
| Msa0002790 | Msa0222730 | 0.827171 | 1.812729e-54 | -8.615850e-47 |
| Msa0002790 | Msa0224560 | 0.829631 | 4.621124e-55 | -8.615850e-47 |
| Msa0002790 | Msa0230490 | 0.864428 | 1.224470e-64 | -8.615850e-47 |
| Msa0002790 | Msa0230520 | 0.803837 | 2.881420e-49 | -8.615850e-47 |
| Msa0002790 | Msa0231100 | 0.866158 | 3.499283e-65 | -8.615850e-47 |
| Msa0002790 | Msa0231660 | 0.819257 | 1.276991e-52 | -8.615850e-47 |
| Msa0002790 | Msa0232010 | 0.866700 | 2.353167e-65 | -8.615850e-47 |
| Msa0002790 | Msa0232080 | 0.867345 | 1.465387e-65 | -8.615850e-47 |
| Msa0002790 | Msa0243140 | 0.838398 | 2.945143e-57 | -8.615850e-47 |
| Msa0002790 | Msa0244780 | 0.866546 | 2.633967e-65 | -8.615850e-47 |
| Msa0002790 | Msa0250820 | 0.857063 | 2.107000e-62 | -8.615850e-47 |
| Msa0002790 | Msa0250870 | 0.808134 | 3.594886e-50 | -8.615850e-47 |
| Msa0002790 | Msa0257450 | 0.873389 | 1.526875e-67 | -8.615850e-47 |
| Msa0002790 | Msa0258850 | 0.876454 | 1.379147e-68 | -8.615850e-47 |
| Msa0002790 | Msa0262480 | 0.857073 | 2.092118e-62 | -8.615850e-47 |
| Msa0002790 | Msa0264010 | 0.866838 | 2.127900e-65 | -8.615850e-47 |
| Msa0002790 | Msa0268130 | 0.851965 | 6.294232e-61 | -8.615850e-47 |
| Msa0002790 | Msa0269180 | 0.833262 | 5.900704e-56 | -8.615850e-47 |
| Msa0002790 | Msa0289580 | 0.909764 | 3.970644e-82 | -8.615850e-47 |
| Msa0002790 | Msa0289610 | 0.915541 | 5.209082e-85 | -8.615850e-47 |
| Msa0002790 | Msa0296720 | 0.851987 | 6.201210e-61 | -8.615850e-47 |
| Msa0002790 | Msa0297830 | 0.816726 | 4.765667e-52 | -8.615850e-47 |
| Msa0002790 | Msa0298200 | 0.872790 | 2.426128e-67 | -8.615850e-47 |
| Msa0002790 | Msa0298990 | 0.858533 | 7.716387e-63 | -8.615850e-47 |
| Msa0002790 | Msa0300350 | 0.861265 | 1.158801e-63 | -8.615850e-47 |
| Msa0002790 | Msa0304590 | 0.807274 | 5.475595e-50 | -8.615850e-47 |
| Msa0002790 | Msa0304660 | 0.804379 | 2.222592e-49 | -8.615850e-47 |
| Msa0002790 | Msa0306690 | 0.913319 | 7.061596e-84 | -8.615850e-47 |
| Msa0002790 | Msa0313100 | 0.828041 | 1.120450e-54 | -8.615850e-47 |
| Msa0002790 | Msa0317910 | 0.826817 | 2.202350e-54 | -8.615850e-47 |
| Msa0002790 | Msa0321640 | 0.843493 | 1.354406e-58 | -8.615850e-47 |
| Msa0002790 | Msa0327300 | 0.921441 | 3.561965e-88 | -8.615850e-47 |
| Msa0002790 | Msa0327330 | 0.909037 | 8.863780e-82 | -8.615850e-47 |
| Msa0002790 | Msa0331700 | 0.801814 | 7.537721e-49 | -8.615850e-47 |
| Msa0002790 | Msa0335840 | 0.823471 | 1.360901e-53 | -8.615850e-47 |
| Msa0002790 | Msa0336010 | 0.868805 | 4.969328e-66 | -8.615850e-47 |
| Msa0002790 | Msa0337650 | 0.807175 | 5.746506e-50 | -8.615850e-47 |
| Msa0002790 | Msa0337670 | 0.839128 | 1.906573e-57 | -8.615850e-47 |
| Msa0002790 | Msa0341880 | 0.820603 | 6.286347e-53 | -8.615850e-47 |
| Msa0002790 | Msa0342850 | 0.822218 | 2.665024e-53 | -8.615850e-47 |
| Msa0002790 | Msa0348830 | 0.878641 | 2.382152e-69 | -8.615850e-47 |
| Msa0002790 | Msa0348990 | 0.816834 | 4.508077e-52 | -8.615850e-47 |
| Msa0002790 | Msa0357900 | 0.808381 | 3.184724e-50 | -8.615850e-47 |
| Msa0002790 | Msa0366890 | 0.807707 | 4.431029e-50 | -8.615850e-47 |
| Msa0002790 | Msa0369450 | 0.806972 | 6.344883e-50 | -8.615850e-47 |
| Msa0002790 | Msa0393370 | 0.819462 | 1.146923e-52 | -8.615850e-47 |
| Msa0002790 | Msa0395890 | 0.800012 | 1.759687e-48 | -8.615850e-47 |
| Msa0002790 | Msa0414800 | 0.815493 | 8.986123e-52 | -8.615850e-47 |
| Msa0002790 | Msa0443390 | 0.878683 | 2.303235e-69 | -8.615850e-47 |
| Msa0002790 | Msa0458060 | 0.804544 | 2.053359e-49 | -8.615850e-47 |
| Msa0002790 | Msa0462110 | 0.815613 | 8.450434e-52 | -8.615850e-47 |
| Msa0002790 | Msa0471880 | 0.814906 | 1.213279e-51 | -8.615850e-47 |
| Msa0002790 | Msa0481850 | 0.876912 | 9.571947e-69 | -8.615850e-47 |
| Msa0002790 | Msa0483110 | 0.873078 | 1.942177e-67 | -8.615850e-47 |
| Msa0002790 | Msa0486070 | 0.839201 | 1.825445e-57 | -8.615850e-47 |
| Msa0002790 | Msa0488820 | 0.805801 | 1.120118e-49 | -8.615850e-47 |
| Msa0002790 | Msa0521050 | 0.837185 | 6.032969e-57 | -8.615850e-47 |
| Msa0002790 | Msa0526540 | 0.897004 | 2.139302e-76 | -8.615850e-47 |
| Msa0002790 | Msa0527150 | 0.842912 | 1.935121e-58 | -8.615850e-47 |
| Msa0002790 | Msa0531650 | 0.843664 | 1.219562e-58 | -8.615850e-47 |
| Msa0002790 | Msa0534750 | 0.822711 | 2.046379e-53 | -8.615850e-47 |
| Msa0002790 | Msa0571920 | 0.846211 | 2.503723e-59 | -8.615850e-47 |
| Msa0002790 | Msa0576940 | 0.892775 | 1.163006e-74 | -8.615850e-47 |
| Msa0002790 | Msa0581110 | 0.814235 | 1.708159e-51 | -8.615850e-47 |
| Msa0002790 | Msa0584030 | 0.818554 | 1.845154e-52 | -8.615850e-47 |
| Msa0002790 | Msa0586420 | 0.804881 | 1.746329e-49 | -8.615850e-47 |
| Msa0002790 | Msa0588360 | 0.866680 | 2.388161e-65 | -8.615850e-47 |
| Msa0002790 | Msa0603320 | 0.873645 | 1.251895e-67 | -8.615850e-47 |
| Msa0002790 | Msa0612390 | 0.816311 | 5.904771e-52 | -8.615850e-47 |
| Msa0002790 | Msa0615440 | 0.838948 | 2.122771e-57 | -8.615850e-47 |
| Msa0002790 | Msa0615580 | 0.853460 | 2.355609e-61 | -8.615850e-47 |
| Msa0002790 | Msa0620890 | 0.833750 | 4.456202e-56 | -8.615850e-47 |
| Msa0002790 | Msa0621950 | 0.844005 | 9.881140e-59 | -8.615850e-47 |
| Msa0002790 | Msa0622750 | 0.879184 | 1.532684e-69 | -8.615850e-47 |
| Msa0002790 | Msa0623200 | 0.882069 | 1.418145e-70 | -8.615850e-47 |
| Msa0002790 | Msa0642160 | 0.822925 | 1.824426e-53 | -8.615850e-47 |
| Msa0002790 | Msa0644350 | 0.830259 | 3.248540e-55 | -8.615850e-47 |
| Msa0002790 | Msa0661300 | 0.837340 | 5.508704e-57 | -8.615850e-47 |
| Msa0002790 | Msa0664560 | 0.810085 | 1.373353e-50 | -8.615850e-47 |
| Msa0002790 | Msa0666230 | 0.868634 | 5.645462e-66 | -8.615850e-47 |
| Msa0002790 | Msa0688850 | 0.819142 | 1.356745e-52 | -8.615850e-47 |
| Msa0002790 | Msa0698490 | 0.839701 | 1.353440e-57 | -8.615850e-47 |
| Msa0002790 | Msa0698660 | 0.837385 | 5.362226e-57 | -8.615850e-47 |
| Msa0002790 | Msa0698780 | 0.854950 | 8.749453e-62 | -8.615850e-47 |
| Msa0002790 | Msa0709730 | 0.808925 | 2.437622e-50 | -8.615850e-47 |
| Msa0002790 | Msa0712610 | 0.878136 | 3.583709e-69 | -8.615850e-47 |
| Msa0002790 | Msa0719420 | 0.844847 | 5.865101e-59 | -8.615850e-47 |
| Msa0002790 | Msa0729200 | 0.895818 | 6.677074e-76 | -8.615850e-47 |
| Msa0002790 | Msa0738100 | 0.888687 | 4.734381e-73 | -8.615850e-47 |
| Msa0002790 | Msa0752910 | 0.803793 | 2.942277e-49 | -8.615850e-47 |
| Msa0002790 | Msa0753140 | 0.810198 | 1.298766e-50 | -8.615850e-47 |
| Msa0002790 | Msa0769590 | 0.900144 | 9.826831e-78 | -8.615850e-47 |
| Msa0002790 | Msa0780490 | 0.845262 | 4.532333e-59 | -8.615850e-47 |
| Msa0002790 | Msa0781080 | 0.832636 | 8.443500e-56 | -8.615850e-47 |
| Msa0002790 | Msa0785130 | 0.887756 | 1.078795e-72 | -8.615850e-47 |
| Msa0002790 | Msa0789680 | 0.844826 | 5.943600e-59 | -8.615850e-47 |
| Msa0002790 | Msa0792420 | 0.836303 | 1.012554e-56 | -8.615850e-47 |
| Msa0002790 | Msa0792760 | 0.815031 | 1.138411e-51 | -8.615850e-47 |
| Msa0002790 | Msa0802410 | 0.822518 | 2.269104e-53 | -8.615850e-47 |
| Msa0002790 | Msa0806880 | 0.909081 | 8.443983e-82 | -8.615850e-47 |
| Msa0002790 | Msa0817540 | 0.908604 | 1.426110e-81 | -8.615850e-47 |
| Msa0002790 | Msa0827380 | 0.801979 | 6.971865e-49 | -8.615850e-47 |
| Msa0002790 | Msa0844220 | -0.807745 | 4.349874e-50 | -8.615850e-47 |
| Msa0002790 | Msa0867060 | 0.812230 | 4.706692e-51 | -8.615850e-47 |
| Msa0002790 | Msa0876170 | 0.845073 | 5.097868e-59 | -8.615850e-47 |
| Msa0002790 | Msa0881290 | 0.869840 | 2.289671e-66 | -8.615850e-47 |
| Msa0002790 | Msa0888810 | 0.831414 | 1.691988e-55 | -8.615850e-47 |
| Msa0002790 | Msa0902760 | 0.820805 | 5.648446e-53 | -8.615850e-47 |
| Msa0002790 | Msa0930490 | 0.822838 | 1.911488e-53 | -8.615850e-47 |
| Msa0002790 | Msa0945480 | 0.844222 | 8.643405e-59 | -8.615850e-47 |
| Msa0002790 | Msa0953310 | 0.884274 | 2.206493e-71 | -8.615850e-47 |
| Msa0002790 | Msa0989540 | 0.819038 | 1.432748e-52 | -8.615850e-47 |
| Msa0002790 | Msa1006840 | 0.859895 | 3.012435e-63 | -8.615850e-47 |
| Msa0002790 | Msa1010310 | 0.833248 | 5.947783e-56 | -8.615850e-47 |
| Msa0002790 | Msa1012740 | 0.838399 | 2.942942e-57 | -8.615850e-47 |
| Msa0002790 | Msa1013400 | 0.817066 | 3.998722e-52 | -8.615850e-47 |
| Msa0002790 | Msa1019240 | 0.877712 | 5.044061e-69 | -8.615850e-47 |
| Msa0002790 | Msa1019260 | 0.883208 | 5.449494e-71 | -8.615850e-47 |
| Msa0002790 | Msa1039520 | 0.829655 | 4.559595e-55 | -8.615850e-47 |
| Msa0002790 | Msa1043690 | 0.841271 | 5.258953e-58 | -8.615850e-47 |
| Msa0002790 | Msa1072710 | 0.884763 | 1.451638e-71 | -8.615850e-47 |
| Msa0002790 | Msa1078870 | 0.856607 | 2.869529e-62 | -8.615850e-47 |
| Msa0002790 | Msa1078980 | 0.831035 | 2.096909e-55 | -8.615850e-47 |
| Msa0002790 | Msa1080350 | 0.902199 | 1.236779e-78 | -8.615850e-47 |
| Msa0002790 | Msa1081150 | 0.807197 | 5.685379e-50 | -8.615850e-47 |
| Msa0002790 | Msa1088490 | 0.919439 | 4.496944e-87 | -8.615850e-47 |
| Msa0002790 | Msa1093530 | 0.816616 | 5.044465e-52 | -8.615850e-47 |
| Msa0002790 | Msa1094380 | 0.818694 | 1.715209e-52 | -8.615850e-47 |
| Msa0002790 | Msa1100710 | 0.801072 | 1.070135e-48 | -8.615850e-47 |
| Msa0002790 | Msa1104140 | 0.870295 | 1.625801e-66 | -8.615850e-47 |
| Msa0002790 | Msa1104210 | 0.879835 | 9.005370e-70 | -8.615850e-47 |
| Msa0002790 | Msa1125860 | 0.904848 | 7.988934e-80 | -8.615850e-47 |
| Msa0002790 | Msa1126060 | 0.900955 | 4.360913e-78 | -8.615850e-47 |
| Msa0002790 | Msa1126510 | 0.842086 | 3.205690e-58 | -8.615850e-47 |
| Msa0002790 | Msa1126830 | 0.815787 | 7.730430e-52 | -8.615850e-47 |
| Msa0002790 | Msa1128120 | 0.803846 | 2.868779e-49 | -8.615850e-47 |
| Msa0002790 | Msa1135890 | 0.839703 | 1.352419e-57 | -8.615850e-47 |
| Msa0002790 | Msa1138870 | 0.823358 | 1.446026e-53 | -8.615850e-47 |
| Msa0002790 | Msa1165780 | 0.825613 | 4.260542e-54 | -8.615850e-47 |
| Msa0002790 | Msa1166860 | 0.855926 | 4.544985e-62 | -8.615850e-47 |
| Msa0002790 | Msa1166870 | 0.868827 | 4.886667e-66 | -8.615850e-47 |
| Msa0002790 | Msa1167540 | 0.852490 | 4.461805e-61 | -8.615850e-47 |
| Msa0002790 | Msa1167550 | 0.845889 | 3.063999e-59 | -8.615850e-47 |
| Msa0002790 | Msa1169180 | 0.824778 | 6.712227e-54 | -8.615850e-47 |
| Msa0002790 | Msa1181830 | 0.833165 | 6.238153e-56 | -8.615850e-47 |
| Msa0002790 | Msa1181840 | 0.806915 | 6.522515e-50 | -8.615850e-47 |
| Msa0002790 | Msa1181850 | 0.833336 | 5.654407e-56 | -8.615850e-47 |
| Msa0002790 | Msa1181860 | 0.811079 | 8.376365e-51 | -8.615850e-47 |
| Msa0002790 | Msa1188260 | 0.815562 | 8.677123e-52 | -8.615850e-47 |
| Msa0002790 | Msa1207270 | 0.816689 | 4.859409e-52 | -8.615850e-47 |
| Msa0002790 | Msa1208020 | 0.811640 | 6.326957e-51 | -8.615850e-47 |
| Msa0002790 | Msa1215820 | 0.982656 | 1.171200e-155 | -8.615850e-47 |
| Msa0002790 | Msa1218600 | 0.802148 | 6.436483e-49 | -8.615850e-47 |
| Msa0002790 | Msa1230580 | 0.827433 | 1.568974e-54 | -8.615850e-47 |
| Msa0002790 | Msa1241190 | 0.807712 | 4.420122e-50 | -8.615850e-47 |
| Msa0002790 | Msa1256840 | 0.806183 | 9.307275e-50 | -8.615850e-47 |
| Msa0002790 | Msa1257510 | 0.870072 | 1.923544e-66 | -8.615850e-47 |
| Msa0002790 | Msa1260530 | 0.838380 | 2.975953e-57 | -8.615850e-47 |
| Msa0002790 | Msa1262890 | 0.807850 | 4.132917e-50 | -8.615850e-47 |
| Msa0002790 | Msa1265630 | 0.841394 | 4.879375e-58 | -8.615850e-47 |
| Msa0002790 | Msa1266060 | 0.807759 | 4.320486e-50 | -8.615850e-47 |
| Msa0002790 | Msa1273340 | 0.816951 | 4.244427e-52 | -8.615850e-47 |
| Msa0002790 | Msa1295170 | 0.806209 | 9.194291e-50 | -8.615850e-47 |
| Msa0002790 | Msa1299590 | 0.842989 | 1.846418e-58 | -8.615850e-47 |
| Msa0002790 | Msa1305050 | 0.860220 | 2.403467e-63 | -8.615850e-47 |
| Msa0002790 | Msa1311400 | 0.813619 | 2.335083e-51 | -8.615850e-47 |
| Msa0002790 | Msa1321790 | 0.832065 | 1.168971e-55 | -8.615850e-47 |
| Msa0002790 | Msa1331710 | 0.856596 | 2.890292e-62 | -8.615850e-47 |
| Msa0002790 | Msa1332250 | 0.840805 | 6.970659e-58 | -8.615850e-47 |
| Msa0002790 | Msa1338190 | 0.867102 | 1.752340e-65 | -8.615850e-47 |
| Msa0002790 | Msa1343260 | 0.876446 | 1.387458e-68 | -8.615850e-47 |
| Msa0002790 | Msa1349570 | 0.887570 | 1.271134e-72 | -8.615850e-47 |
| Msa0002790 | Msa1356790 | 0.885760 | 6.159343e-72 | -8.615850e-47 |
| Msa0002790 | Msa1362790 | 0.853408 | 2.437388e-61 | -8.615850e-47 |
| Msa0002790 | Msa1363330 | 0.898109 | 7.321754e-77 | -8.615850e-47 |
| Msa0002790 | Msa1366180 | 0.920099 | 1.964198e-87 | -8.615850e-47 |
| Msa0002790 | Msa1369190 | 0.863864 | 1.835772e-64 | -8.615850e-47 |
| Msa0002790 | Msa1374120 | 0.843074 | 1.751965e-58 | -8.615850e-47 |
| Msa0002790 | Msa1379760 | 0.875578 | 2.758700e-68 | -8.615850e-47 |
| Msa0002790 | Msa1386600 | 0.898784 | 3.779019e-77 | -8.615850e-47 |
| Msa0002790 | Msa1387410 | 0.872146 | 3.978136e-67 | -8.615850e-47 |
| Msa0002790 | Msa1392590 | 0.804192 | 2.430404e-49 | -8.615850e-47 |
| Msa0002790 | Msa1394290 | 0.824068 | 9.862613e-54 | -8.615850e-47 |
| Msa0002790 | Msa1397100 | 0.818346 | 2.056492e-52 | -8.615850e-47 |
| Msa0002790 | Msa1399530 | 0.856136 | 3.944812e-62 | -8.615850e-47 |
| Msa0002790 | Msa1403910 | 0.813279 | 2.773664e-51 | -8.615850e-47 |
| Msa0002790 | Msa1406080 | 0.805122 | 1.554864e-49 | -8.615850e-47 |
| Msa0002790 | Msa1407070 | 0.824925 | 6.195941e-54 | -8.615850e-47 |
| Msa0002790 | Msa1410440 | 0.803624 | 3.189433e-49 | -8.615850e-47 |
| Msa0002790 | Msa1413500 | 0.910094 | 2.751211e-82 | -8.615850e-47 |
| Msa0002790 | Msa1418760 | 0.817283 | 3.573408e-52 | -8.615850e-47 |
| Msa0002790 | Msa1426120 | 0.864890 | 8.775755e-65 | -8.615850e-47 |
| Msa0002790 | Msa1426370 | 0.875659 | 2.588648e-68 | -8.615850e-47 |
| Msa0002790 | Msa1426490 | 0.950005 | 4.015744e-108 | -8.615850e-47 |
| Msa0002790 | Msa1427560 | 0.881120 | 3.125340e-70 | -8.615850e-47 |
| Msa0002790 | Msa1432700 | 0.855653 | 5.460768e-62 | -8.615850e-47 |
| Msa0002790 | Msa1433310 | 0.860844 | 1.555851e-63 | -8.615850e-47 |
| Msa0002790 | Msa1448690 | 0.858934 | 5.858001e-63 | -8.615850e-47 |
| Msa0002790 | Msa1450280 | 0.862831 | 3.833793e-64 | -8.615850e-47 |
| Msa0002790 | Msa1456050 | 0.874420 | 6.851633e-68 | -8.615850e-47 |
| Msa0002790 | Msa1457920 | 0.807153 | 5.808462e-50 | -8.615850e-47 |
| Msa0002790 | Msa1465260 | 0.847018 | 1.508156e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002790 | MtrunA17_Chr4g0065131 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 4.13e-116 | 325 |
| Msa0002790 | MtrunA17_Chr8g0372611 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 1.17e-115 | 323 |
| Msa0002790 | MtrunA17_Chr1g0152301 | 93.789 | 161 | 9 | 1 | 1 | 160 | 1 | 161 | 6.37e-100 | 284 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002790 | AT3G48930.1 | 91.250 | 160 | 14 | 0 | 1 | 160 | 1 | 160 | 3.55e-97 | 277 |
| Msa0002790 | AT5G23740.1 | 90.000 | 160 | 15 | 1 | 1 | 160 | 1 | 159 | 2.67e-95 | 273 |
| Msa0002790 | AT4G30800.1 | 90.625 | 160 | 14 | 1 | 1 | 160 | 1 | 159 | 1.41e-93 | 268 |
Find 71 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAAATGGCGAAATAAATT+AGG | 0.187394 | 1_1:+4986688 | Msa0002790:five_prime_UTR |
| AATACAAGCGCTTTCTTATC+AGG | 0.209242 | 1_1:-4988978 | None:intergenic |
| GAAGGAGATCATGTTATTAT+TGG | 0.232109 | 1_1:+4988471 | Msa0002790:CDS |
| ATGGAAACATTGCCAGTAAA+AGG | 0.250015 | 1_1:-4988203 | None:intergenic |
| GGAACCTTCAATGGCTTCTC+TGG | 0.256456 | 1_1:-4987145 | None:intergenic |
| ATTGCTCCGGTCCAGTAAAA+TGG | 0.334230 | 1_1:+4986674 | Msa0002790:five_prime_UTR |
| CCATAGCATTGTAATAAAAT+CGG | 0.339068 | 1_1:+4986644 | Msa0002790:five_prime_UTR |
| TTCTTTAAATCCGTTGGTCT+TGG | 0.342978 | 1_1:+4987111 | Msa0002790:CDS |
| AGATGTGATGAGAGTAATTC+TGG | 0.347310 | 1_1:+4988729 | Msa0002790:exon |
| AAGGAGATCATGTTATTATT+GGG | 0.351302 | 1_1:+4988472 | Msa0002790:CDS |
| GCTGGTTCATCCAGTGGTGC+TGG | 0.354296 | 1_1:+4988682 | Msa0002790:CDS |
| TAAAATGGCGAAATAAATTA+GGG | 0.356524 | 1_1:+4986689 | Msa0002790:five_prime_UTR |
| ACCCTCTCACTGAAATTTGT+TGG | 0.362133 | 1_1:-4986723 | None:intergenic |
| TGAATAGGACTATTATTGTT+AGG | 0.366373 | 1_1:+4988267 | Msa0002790:CDS |
| GCTGGGAAGAAGGCATTTAC+TGG | 0.369417 | 1_1:+4988700 | Msa0002790:CDS |
| AGCAACCTAAAGTGTTTCTA+TGG | 0.384927 | 1_1:+4986939 | Msa0002790:CDS |
| ATCACCCTGCTTCCGTGTTA+AGG | 0.389482 | 1_1:+4988449 | Msa0002790:CDS |
| ACATACCATAGAAACACTTT+AGG | 0.392416 | 1_1:-4986944 | None:intergenic |
| TCCTTCCTTAACACGGAAGC+AGG | 0.400654 | 1_1:-4988454 | None:intergenic |
| TTACTGGCAATGTTTCCATC+CGG | 0.434194 | 1_1:+4988207 | Msa0002790:CDS |
| TACTGGCAATGTTTCCATCC+GGG | 0.437436 | 1_1:+4988208 | Msa0002790:CDS |
| GTCACAGTGCTAAGATGAAT+AGG | 0.443080 | 1_1:+4988252 | Msa0002790:CDS |
| AACCGCTTCTTTAAATCCGT+TGG | 0.460564 | 1_1:+4987105 | Msa0002790:CDS |
| AAAGCAAAACAAAATTGAAC+AGG | 0.460920 | 1_1:-4988778 | None:intergenic |
| AGGGCACTTCTTGTCAATGT+AGG | 0.469506 | 1_1:-4988183 | None:intergenic |
| GACGTTGAACCTCACAGTCT+TGG | 0.472416 | 1_1:-4988644 | None:intergenic |
| TGCCTTCTTCCCAGCACCAC+TGG | 0.477160 | 1_1:-4988692 | None:intergenic |
| TCCAACAAATTTCAGTGAGA+GGG | 0.477757 | 1_1:+4986722 | Msa0002790:five_prime_UTR |
| ATCCAGTGGTGCTGGGAAGA+AGG | 0.479938 | 1_1:+4988690 | Msa0002790:CDS |
| CAGCCATGGTGAAGAAGCTT+CGG | 0.482612 | 1_1:-4986791 | None:intergenic |
| ATGTTATTATTGGGCAATGC+AGG | 0.485129 | 1_1:+4988481 | Msa0002790:CDS |
| TTGAAGTTAAATTCTGTCGT+TGG | 0.486172 | 1_1:+4988800 | Msa0002790:three_prime_UTR |
| CTGGTTCATCCAGTGGTGCT+GGG | 0.492604 | 1_1:+4988683 | Msa0002790:CDS |
| AATCGGGTTCATTATTGCTC+CGG | 0.493717 | 1_1:+4986661 | Msa0002790:five_prime_UTR |
| CATAGCATTGTAATAAAATC+GGG | 0.494684 | 1_1:+4986645 | Msa0002790:five_prime_UTR |
| GTTAATTACTTGTTCAGCCA+TGG | 0.496408 | 1_1:-4986805 | None:intergenic |
| AAAGGAAAGAGGCCTGGAAA+AGG | 0.502986 | 1_1:+4987078 | Msa0002790:CDS |
| AGCTAAAATACGGCCCCGGA+TGG | 0.510722 | 1_1:-4988222 | None:intergenic |
| GACAAGTTCCAGCTAAAATA+CGG | 0.511848 | 1_1:-4988232 | None:intergenic |
| TGTCGTTGGATACAAGTTGA+AGG | 0.514126 | 1_1:+4988814 | Msa0002790:three_prime_UTR |
| TTCCAACAAATTTCAGTGAG+AGG | 0.514757 | 1_1:+4986721 | Msa0002790:five_prime_UTR |
| TGGAAACATTGCCAGTAAAA+GGG | 0.518269 | 1_1:-4988202 | None:intergenic |
| ACTCCCAGAGAAGCCATTGA+AGG | 0.523893 | 1_1:+4987141 | Msa0002790:CDS |
| TTGGTAGCTCAAAGAAGAGT+GGG | 0.529884 | 1_1:+4987055 | Msa0002790:intron |
| GCACCACTGGATGAACCAGC+TGG | 0.536114 | 1_1:-4988679 | None:intergenic |
| AGTGGGAAAGGAAAGAGGCC+TGG | 0.536739 | 1_1:+4987072 | Msa0002790:CDS |
| GAGTAATTCTGGTTTCTGTA+TGG | 0.556390 | 1_1:+4988740 | Msa0002790:three_prime_UTR |
| CCCTGCTTCCGTGTTAAGGA+AGG | 0.558291 | 1_1:+4988453 | Msa0002790:CDS |
| GAACCTTCAATGGCTTCTCT+GGG | 0.562688 | 1_1:-4987144 | None:intergenic |
| GTCTTGAAAGTGATCCCAGC+TGG | 0.565686 | 1_1:+4988664 | Msa0002790:CDS |
| ATCCCAGCTGGTTCATCCAG+TGG | 0.566568 | 1_1:+4988676 | Msa0002790:CDS |
| AGAAGAGTGGGAAAGGAAAG+AGG | 0.567345 | 1_1:+4987067 | Msa0002790:CDS |
| ACTGGCAATGTTTCCATCCG+GGG | 0.570865 | 1_1:+4988209 | Msa0002790:CDS |
| AAGCAGGGTGATACATGAGC+AGG | 0.574164 | 1_1:-4988438 | None:intergenic |
| GGAAAGAGGCCTGGAAAAGG+TGG | 0.575072 | 1_1:+4987081 | Msa0002790:CDS |
| TTGTGTGTTACAGACTGAGA+AGG | 0.577565 | 1_1:+4986907 | Msa0002790:intron |
| TTCCAGCTAAAATACGGCCC+CGG | 0.583185 | 1_1:-4988226 | None:intergenic |
| ATAGGACTATTATTGTTAGG+AGG | 0.587464 | 1_1:+4988270 | Msa0002790:CDS |
| AGCTCAAAGAAGAGTGGGAA+AGG | 0.587623 | 1_1:+4987060 | Msa0002790:intron |
| GACCAACGGATTTAAAGAAG+CGG | 0.587920 | 1_1:-4987107 | None:intergenic |
| TTTGGTAGCTCAAAGAAGAG+TGG | 0.594148 | 1_1:+4987054 | Msa0002790:intron |
| CTCTATTTAGATATGAGAAG+AGG | 0.599289 | 1_1:+4988403 | Msa0002790:intron |
| AACCTCACAGTCTTGGAGAG+AGG | 0.610094 | 1_1:-4988637 | None:intergenic |
| ATTCCGAAGCTTCTTCACCA+TGG | 0.616570 | 1_1:+4986788 | Msa0002790:exon |
| CATGATCTCCTTCCTTAACA+CGG | 0.626861 | 1_1:-4988461 | None:intergenic |
| CACCACTGGATGAACCAGCT+GGG | 0.630037 | 1_1:-4988678 | None:intergenic |
| CCTTCCTTAACACGGAAGCA+GGG | 0.633141 | 1_1:-4988453 | None:intergenic |
| ACTTTATCAAGAAGTATCAG+AGG | 0.634593 | 1_1:+4988303 | Msa0002790:CDS |
| GGCCTCTCTCCAAGACTGTG+AGG | 0.650917 | 1_1:+4988635 | Msa0002790:intron |
| AGTCTTAAATCCAAGACCAA+CGG | 0.666807 | 1_1:-4987121 | None:intergenic |
| GAAGCTTCGGAATTTCGCAG+AGG | 0.714721 | 1_1:-4986778 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTATTTTAAAAAT+AGG | + | chr1_1:4988158-4988177 | Msa0002790:intron | 0.0% |
| !!! | ATTTTTTTTATTTTAAAAAT+AGG | + | chr1_1:4988158-4988177 | Msa0002790:intron | 0.0% |
| !!! | AATTTATTGTGATATTTTAT+TGG | + | chr1_1:4987188-4987207 | Msa0002790:intron | 10.0% |
| !!! | AAAAAAACTTAATTGAATTT+TGG | + | chr1_1:4988898-4988917 | Msa0002790:intron | 10.0% |
| !!! | AATTTATTGTGATATTTTAT+TGG | + | chr1_1:4987188-4987207 | Msa0002790:intron | 10.0% |
| !!! | AAAAAAACTTAATTGAATTT+TGG | + | chr1_1:4988898-4988917 | Msa0002790:intron | 10.0% |
| !!! | AAAAAAGGATAAATCATTTT+GGG | - | chr1_1:4986983-4987002 | None:intergenic | 15.0% |
| !!! | AAAAAAAGGATAAATCATTT+TGG | - | chr1_1:4986984-4987003 | None:intergenic | 15.0% |
| !!! | AAAAAAGGATAAATCATTTT+GGG | - | chr1_1:4986983-4987002 | None:intergenic | 15.0% |
| !!! | AAAAAAAGGATAAATCATTT+TGG | - | chr1_1:4986984-4987003 | None:intergenic | 15.0% |
| !! | TAAAATGGCGAAATAAATTA+GGG | + | chr1_1:4986689-4986708 | Msa0002790:five_prime_UTR | 20.0% |
| !!! | GTTTGTTATTTGATTGAATT+TGG | + | chr1_1:4987036-4987055 | Msa0002790:intron | 20.0% |
| !!! | TGTGCAATAAATGTTTTAAT+TGG | + | chr1_1:4987380-4987399 | Msa0002790:intron | 20.0% |
| !! | ACATCATATATTAAAGACTA+TGG | - | chr1_1:4987561-4987580 | None:intergenic | 20.0% |
| !!! | AATACAAAATGGATTTCAAA+AGG | - | chr1_1:4987858-4987877 | None:intergenic | 20.0% |
| !!! | ATAATTTAAGACACAGAAAA+AGG | - | chr1_1:4988526-4988545 | None:intergenic | 20.0% |
| !!! | AAGGATTTAGATTTTCATTA+TGG | + | chr1_1:4988833-4988852 | Msa0002790:three_prime_UTR | 20.0% |
| !! | TAAAATGGCGAAATAAATTA+GGG | + | chr1_1:4986689-4986708 | Msa0002790:five_prime_UTR | 20.0% |
| !!! | GTTTGTTATTTGATTGAATT+TGG | + | chr1_1:4987036-4987055 | Msa0002790:intron | 20.0% |
| !!! | TGTGCAATAAATGTTTTAAT+TGG | + | chr1_1:4987380-4987399 | Msa0002790:intron | 20.0% |
| !! | ACATCATATATTAAAGACTA+TGG | - | chr1_1:4987561-4987580 | None:intergenic | 20.0% |
| !!! | AATACAAAATGGATTTCAAA+AGG | - | chr1_1:4987858-4987877 | None:intergenic | 20.0% |
| !!! | ATAATTTAAGACACAGAAAA+AGG | - | chr1_1:4988526-4988545 | None:intergenic | 20.0% |
| !!! | AAGGATTTAGATTTTCATTA+TGG | + | chr1_1:4988833-4988852 | Msa0002790:three_prime_UTR | 20.0% |
| ! | CCATAGCATTGTAATAAAAT+CGG | + | chr1_1:4986644-4986663 | Msa0002790:five_prime_UTR | 25.0% |
| ! | CATAGCATTGTAATAAAATC+GGG | + | chr1_1:4986645-4986664 | Msa0002790:five_prime_UTR | 25.0% |
| !!! | AATTTATTTCGCCATTTTAC+TGG | - | chr1_1:4986688-4986707 | None:intergenic | 25.0% |
| ! | GTAAAATGGCGAAATAAATT+AGG | + | chr1_1:4986688-4986707 | Msa0002790:five_prime_UTR | 25.0% |
| !! | TTGTGATATTTTATTGGATC+TGG | + | chr1_1:4987194-4987213 | Msa0002790:intron | 25.0% |
| !! | TCACAAATAGTCAATTTTGT+AGG | + | chr1_1:4987247-4987266 | Msa0002790:intron | 25.0% |
| !!! | TGATGTTTTAATGTATGATG+TGG | + | chr1_1:4987575-4987594 | Msa0002790:intron | 25.0% |
| ! | ACATCAATGCATTTACATTT+CGG | - | chr1_1:4987749-4987768 | None:intergenic | 25.0% |
| ! | AAAGAAACAACAATGTCATT+TGG | - | chr1_1:4988032-4988051 | None:intergenic | 25.0% |
| ! | AAAGAAACAACAAAGTCATT+TGG | - | chr1_1:4988092-4988111 | None:intergenic | 25.0% |
| ! | TGAATAGGACTATTATTGTT+AGG | + | chr1_1:4988267-4988286 | Msa0002790:CDS | 25.0% |
| ! | AAGGAGATCATGTTATTATT+GGG | + | chr1_1:4988472-4988491 | Msa0002790:CDS | 25.0% |
| ! | AAAGCAAAACAAAATTGAAC+AGG | - | chr1_1:4988781-4988800 | None:intergenic | 25.0% |
| !!! | TTTTTGATTTTTTAGACGTG+AGG | - | chr1_1:4988945-4988964 | None:intergenic | 25.0% |
| ! | CCATAGCATTGTAATAAAAT+CGG | + | chr1_1:4986644-4986663 | Msa0002790:five_prime_UTR | 25.0% |
| ! | CATAGCATTGTAATAAAATC+GGG | + | chr1_1:4986645-4986664 | Msa0002790:five_prime_UTR | 25.0% |
| !!! | AATTTATTTCGCCATTTTAC+TGG | - | chr1_1:4986688-4986707 | None:intergenic | 25.0% |
| ! | GTAAAATGGCGAAATAAATT+AGG | + | chr1_1:4986688-4986707 | Msa0002790:five_prime_UTR | 25.0% |
| !! | TTGTGATATTTTATTGGATC+TGG | + | chr1_1:4987194-4987213 | Msa0002790:intron | 25.0% |
| !! | TCACAAATAGTCAATTTTGT+AGG | + | chr1_1:4987247-4987266 | Msa0002790:intron | 25.0% |
| !!! | TGATGTTTTAATGTATGATG+TGG | + | chr1_1:4987575-4987594 | Msa0002790:intron | 25.0% |
| ! | ACATCAATGCATTTACATTT+CGG | - | chr1_1:4987749-4987768 | None:intergenic | 25.0% |
| ! | AAAGAAACAACAATGTCATT+TGG | - | chr1_1:4988032-4988051 | None:intergenic | 25.0% |
| ! | AAAGAAACAACAAAGTCATT+TGG | - | chr1_1:4988092-4988111 | None:intergenic | 25.0% |
| ! | TGAATAGGACTATTATTGTT+AGG | + | chr1_1:4988267-4988286 | Msa0002790:CDS | 25.0% |
| ! | AAGGAGATCATGTTATTATT+GGG | + | chr1_1:4988472-4988491 | Msa0002790:CDS | 25.0% |
| ! | AAAGCAAAACAAAATTGAAC+AGG | - | chr1_1:4988781-4988800 | None:intergenic | 25.0% |
| !!! | TTTTTGATTTTTTAGACGTG+AGG | - | chr1_1:4988945-4988964 | None:intergenic | 25.0% |
| ! | CCGATTTTATTACAATGCTA+TGG | - | chr1_1:4986647-4986666 | None:intergenic | 30.0% |
| !! | TTCCTTTTTCCCTTTTGTTT+CGG | + | chr1_1:4986834-4986853 | Msa0002790:intron | 30.0% |
| TAAGAACAACCGAAACAAAA+GGG | - | chr1_1:4986846-4986865 | None:intergenic | 30.0% | |
| ACATACCATAGAAACACTTT+AGG | - | chr1_1:4986947-4986966 | None:intergenic | 30.0% | |
| CAACAAATCGAAGGAAAAAA+AGG | - | chr1_1:4986998-4987017 | None:intergenic | 30.0% | |
| TCAAAATCACAACAAATCGA+AGG | - | chr1_1:4987007-4987026 | None:intergenic | 30.0% | |
| ACAATAAATTCACAATGCAG+AGG | - | chr1_1:4987178-4987197 | None:intergenic | 30.0% | |
| GAATTTCAACAAAATCACAG+TGG | - | chr1_1:4987433-4987452 | None:intergenic | 30.0% | |
| !! | AAAGTATAGCCTTTGAGTTT+TGG | + | chr1_1:4987453-4987472 | Msa0002790:intron | 30.0% |
| GAAGATTAATCTTTGATAGG+TGG | - | chr1_1:4987511-4987530 | None:intergenic | 30.0% | |
| CAGGAAGATTAATCTTTGAT+AGG | - | chr1_1:4987514-4987533 | None:intergenic | 30.0% | |
| CATGTGGCTGAATTTATTAT+TGG | + | chr1_1:4987600-4987619 | Msa0002790:intron | 30.0% | |
| TTCTGTCATGCAATCATTAT+TGG | + | chr1_1:4987768-4987787 | Msa0002790:intron | 30.0% | |
| !! | AGCATATTATTTTGCTAGCT+AGG | - | chr1_1:4987822-4987841 | None:intergenic | 30.0% |
| CATTGGACTCTAATACAAAA+TGG | - | chr1_1:4987869-4987888 | None:intergenic | 30.0% | |
| ! | CATTTTGTATTAGAGTCCAA+TGG | + | chr1_1:4987867-4987886 | Msa0002790:intron | 30.0% |
| ! | ACAACAATGTCATTTGGATT+TGG | - | chr1_1:4988026-4988045 | None:intergenic | 30.0% |
| CAGAAATAAACATGCACATT+CGG | - | chr1_1:4988055-4988074 | None:intergenic | 30.0% | |
| ATAGGACTATTATTGTTAGG+AGG | + | chr1_1:4988270-4988289 | Msa0002790:CDS | 30.0% | |
| !! | ACTTTATCAAGAAGTATCAG+AGG | + | chr1_1:4988303-4988322 | Msa0002790:CDS | 30.0% |
| CAAATAAAAACAGGACATCA+AGG | - | chr1_1:4988335-4988354 | None:intergenic | 30.0% | |
| CTCTATTTAGATATGAGAAG+AGG | + | chr1_1:4988403-4988422 | Msa0002790:intron | 30.0% | |
| GAAGGAGATCATGTTATTAT+TGG | + | chr1_1:4988471-4988490 | Msa0002790:CDS | 30.0% | |
| GATATAGATGTATGTCTGAT+TGG | + | chr1_1:4988590-4988609 | Msa0002790:intron | 30.0% | |
| !! | TTTATTTGTGCCATTTCATC+AGG | + | chr1_1:4988614-4988633 | Msa0002790:intron | 30.0% |
| TTGAAGTTAAATTCTGTCGT+TGG | + | chr1_1:4988800-4988819 | Msa0002790:three_prime_UTR | 30.0% | |
| ! | CCGATTTTATTACAATGCTA+TGG | - | chr1_1:4986647-4986666 | None:intergenic | 30.0% |
| !! | TTCCTTTTTCCCTTTTGTTT+CGG | + | chr1_1:4986834-4986853 | Msa0002790:intron | 30.0% |
| TAAGAACAACCGAAACAAAA+GGG | - | chr1_1:4986846-4986865 | None:intergenic | 30.0% | |
| ACATACCATAGAAACACTTT+AGG | - | chr1_1:4986947-4986966 | None:intergenic | 30.0% | |
| CAACAAATCGAAGGAAAAAA+AGG | - | chr1_1:4986998-4987017 | None:intergenic | 30.0% | |
| TCAAAATCACAACAAATCGA+AGG | - | chr1_1:4987007-4987026 | None:intergenic | 30.0% | |
| ACAATAAATTCACAATGCAG+AGG | - | chr1_1:4987178-4987197 | None:intergenic | 30.0% | |
| GAATTTCAACAAAATCACAG+TGG | - | chr1_1:4987433-4987452 | None:intergenic | 30.0% | |
| !! | AAAGTATAGCCTTTGAGTTT+TGG | + | chr1_1:4987453-4987472 | Msa0002790:intron | 30.0% |
| GAAGATTAATCTTTGATAGG+TGG | - | chr1_1:4987511-4987530 | None:intergenic | 30.0% | |
| CAGGAAGATTAATCTTTGAT+AGG | - | chr1_1:4987514-4987533 | None:intergenic | 30.0% | |
| CATGTGGCTGAATTTATTAT+TGG | + | chr1_1:4987600-4987619 | Msa0002790:intron | 30.0% | |
| TTCTGTCATGCAATCATTAT+TGG | + | chr1_1:4987768-4987787 | Msa0002790:intron | 30.0% | |
| !! | AGCATATTATTTTGCTAGCT+AGG | - | chr1_1:4987822-4987841 | None:intergenic | 30.0% |
| CATTGGACTCTAATACAAAA+TGG | - | chr1_1:4987869-4987888 | None:intergenic | 30.0% | |
| ! | CATTTTGTATTAGAGTCCAA+TGG | + | chr1_1:4987867-4987886 | Msa0002790:intron | 30.0% |
| ! | ACAACAATGTCATTTGGATT+TGG | - | chr1_1:4988026-4988045 | None:intergenic | 30.0% |
| CAGAAATAAACATGCACATT+CGG | - | chr1_1:4988055-4988074 | None:intergenic | 30.0% | |
| ATAGGACTATTATTGTTAGG+AGG | + | chr1_1:4988270-4988289 | Msa0002790:CDS | 30.0% | |
| !! | ACTTTATCAAGAAGTATCAG+AGG | + | chr1_1:4988303-4988322 | Msa0002790:CDS | 30.0% |
| CAAATAAAAACAGGACATCA+AGG | - | chr1_1:4988335-4988354 | None:intergenic | 30.0% | |
| CTCTATTTAGATATGAGAAG+AGG | + | chr1_1:4988403-4988422 | Msa0002790:intron | 30.0% | |
| GAAGGAGATCATGTTATTAT+TGG | + | chr1_1:4988471-4988490 | Msa0002790:CDS | 30.0% | |
| GATATAGATGTATGTCTGAT+TGG | + | chr1_1:4988590-4988609 | Msa0002790:intron | 30.0% | |
| !! | TTTATTTGTGCCATTTCATC+AGG | + | chr1_1:4988614-4988633 | Msa0002790:intron | 30.0% |
| TTGAAGTTAAATTCTGTCGT+TGG | + | chr1_1:4988800-4988819 | Msa0002790:three_prime_UTR | 30.0% | |
| TTCCAACAAATTTCAGTGAG+AGG | + | chr1_1:4986721-4986740 | Msa0002790:five_prime_UTR | 35.0% | |
| TCCAACAAATTTCAGTGAGA+GGG | + | chr1_1:4986722-4986741 | Msa0002790:five_prime_UTR | 35.0% | |
| GTTAATTACTTGTTCAGCCA+TGG | - | chr1_1:4986808-4986827 | None:intergenic | 35.0% | |
| AACCGAAACAAAAGGGAAAA+AGG | - | chr1_1:4986839-4986858 | None:intergenic | 35.0% | |
| CTAAGAACAACCGAAACAAA+AGG | - | chr1_1:4986847-4986866 | None:intergenic | 35.0% | |
| ! | AGCAACCTAAAGTGTTTCTA+TGG | + | chr1_1:4986939-4986958 | Msa0002790:CDS | 35.0% |
| ! | TTCTTTAAATCCGTTGGTCT+TGG | + | chr1_1:4987111-4987130 | Msa0002790:CDS | 35.0% |
| AGTCTTAAATCCAAGACCAA+CGG | - | chr1_1:4987124-4987143 | None:intergenic | 35.0% | |
| GGTAAAAAAGGAACCTTCAA+TGG | - | chr1_1:4987157-4987176 | None:intergenic | 35.0% | |
| TCACAATGCAGAGGTAAAAA+AGG | - | chr1_1:4987169-4987188 | None:intergenic | 35.0% | |
| AATGTATGATGTGGATCATG+TGG | + | chr1_1:4987584-4987603 | Msa0002790:intron | 35.0% | |
| !!! | AAGCTTTTGATTTCGAAACC+AGG | + | chr1_1:4987643-4987662 | Msa0002790:intron | 35.0% |
| !!! | AGCTTTTGATTTCGAAACCA+GGG | + | chr1_1:4987644-4987663 | Msa0002790:intron | 35.0% |
| AAACACATGATACAAATCCC+TGG | - | chr1_1:4987664-4987683 | None:intergenic | 35.0% | |
| !! | CCTATACTTTCAAGTTGGAT+TGG | - | chr1_1:4987715-4987734 | None:intergenic | 35.0% |
| ! | CCAATCCAACTTGAAAGTAT+AGG | + | chr1_1:4987712-4987731 | Msa0002790:intron | 35.0% |
| ! | GTAGACCTATACTTTCAAGT+TGG | - | chr1_1:4987720-4987739 | None:intergenic | 35.0% |
| GACAACAAGTGTTATGACTA+GGG | - | chr1_1:4987903-4987922 | None:intergenic | 35.0% | |
| TGACAACAAGTGTTATGACT+AGG | - | chr1_1:4987904-4987923 | None:intergenic | 35.0% | |
| TGGAAACATTGCCAGTAAAA+GGG | - | chr1_1:4988205-4988224 | None:intergenic | 35.0% | |
| ATGGAAACATTGCCAGTAAA+AGG | - | chr1_1:4988206-4988225 | None:intergenic | 35.0% | |
| GACAAGTTCCAGCTAAAATA+CGG | - | chr1_1:4988235-4988254 | None:intergenic | 35.0% | |
| !!! | GTCCTGTTTTTATTTGCACT+TGG | + | chr1_1:4988339-4988358 | Msa0002790:intron | 35.0% |
| CTCCAAGTGCAAATAAAAAC+AGG | - | chr1_1:4988344-4988363 | None:intergenic | 35.0% | |
| ATGTTATTATTGGGCAATGC+AGG | + | chr1_1:4988481-4988500 | Msa0002790:CDS | 35.0% | |
| AGATGTGATGAGAGTAATTC+TGG | + | chr1_1:4988729-4988748 | Msa0002790:exon | 35.0% | |
| !! | GAGTAATTCTGGTTTCTGTA+TGG | + | chr1_1:4988740-4988759 | Msa0002790:three_prime_UTR | 35.0% |
| !!! | GATTTTTTAGACGTGAGGTA+AGG | - | chr1_1:4988940-4988959 | None:intergenic | 35.0% |
| AATACAAGCGCTTTCTTATC+AGG | - | chr1_1:4988981-4989000 | None:intergenic | 35.0% | |
| TTCCAACAAATTTCAGTGAG+AGG | + | chr1_1:4986721-4986740 | Msa0002790:five_prime_UTR | 35.0% | |
| TCCAACAAATTTCAGTGAGA+GGG | + | chr1_1:4986722-4986741 | Msa0002790:five_prime_UTR | 35.0% | |
| GTTAATTACTTGTTCAGCCA+TGG | - | chr1_1:4986808-4986827 | None:intergenic | 35.0% | |
| AACCGAAACAAAAGGGAAAA+AGG | - | chr1_1:4986839-4986858 | None:intergenic | 35.0% | |
| CTAAGAACAACCGAAACAAA+AGG | - | chr1_1:4986847-4986866 | None:intergenic | 35.0% | |
| ! | AGCAACCTAAAGTGTTTCTA+TGG | + | chr1_1:4986939-4986958 | Msa0002790:CDS | 35.0% |
| ! | TTCTTTAAATCCGTTGGTCT+TGG | + | chr1_1:4987111-4987130 | Msa0002790:CDS | 35.0% |
| AGTCTTAAATCCAAGACCAA+CGG | - | chr1_1:4987124-4987143 | None:intergenic | 35.0% | |
| GGTAAAAAAGGAACCTTCAA+TGG | - | chr1_1:4987157-4987176 | None:intergenic | 35.0% | |
| TCACAATGCAGAGGTAAAAA+AGG | - | chr1_1:4987169-4987188 | None:intergenic | 35.0% | |
| AATGTATGATGTGGATCATG+TGG | + | chr1_1:4987584-4987603 | Msa0002790:intron | 35.0% | |
| !!! | AAGCTTTTGATTTCGAAACC+AGG | + | chr1_1:4987643-4987662 | Msa0002790:intron | 35.0% |
| !!! | AGCTTTTGATTTCGAAACCA+GGG | + | chr1_1:4987644-4987663 | Msa0002790:intron | 35.0% |
| AAACACATGATACAAATCCC+TGG | - | chr1_1:4987664-4987683 | None:intergenic | 35.0% | |
| !! | CCTATACTTTCAAGTTGGAT+TGG | - | chr1_1:4987715-4987734 | None:intergenic | 35.0% |
| ! | CCAATCCAACTTGAAAGTAT+AGG | + | chr1_1:4987712-4987731 | Msa0002790:intron | 35.0% |
| ! | GTAGACCTATACTTTCAAGT+TGG | - | chr1_1:4987720-4987739 | None:intergenic | 35.0% |
| GACAACAAGTGTTATGACTA+GGG | - | chr1_1:4987903-4987922 | None:intergenic | 35.0% | |
| TGACAACAAGTGTTATGACT+AGG | - | chr1_1:4987904-4987923 | None:intergenic | 35.0% | |
| TGGAAACATTGCCAGTAAAA+GGG | - | chr1_1:4988205-4988224 | None:intergenic | 35.0% | |
| ATGGAAACATTGCCAGTAAA+AGG | - | chr1_1:4988206-4988225 | None:intergenic | 35.0% | |
| GACAAGTTCCAGCTAAAATA+CGG | - | chr1_1:4988235-4988254 | None:intergenic | 35.0% | |
| !!! | GTCCTGTTTTTATTTGCACT+TGG | + | chr1_1:4988339-4988358 | Msa0002790:intron | 35.0% |
| CTCCAAGTGCAAATAAAAAC+AGG | - | chr1_1:4988344-4988363 | None:intergenic | 35.0% | |
| ATGTTATTATTGGGCAATGC+AGG | + | chr1_1:4988481-4988500 | Msa0002790:CDS | 35.0% | |
| AGATGTGATGAGAGTAATTC+TGG | + | chr1_1:4988729-4988748 | Msa0002790:exon | 35.0% | |
| !! | GAGTAATTCTGGTTTCTGTA+TGG | + | chr1_1:4988740-4988759 | Msa0002790:three_prime_UTR | 35.0% |
| !!! | GATTTTTTAGACGTGAGGTA+AGG | - | chr1_1:4988940-4988959 | None:intergenic | 35.0% |
| AATACAAGCGCTTTCTTATC+AGG | - | chr1_1:4988981-4989000 | None:intergenic | 35.0% | |
| AATCGGGTTCATTATTGCTC+CGG | + | chr1_1:4986661-4986680 | Msa0002790:five_prime_UTR | 40.0% | |
| !! | ATTTCGCCATTTTACTGGAC+CGG | - | chr1_1:4986683-4986702 | None:intergenic | 40.0% |
| ACCCTCTCACTGAAATTTGT+TGG | - | chr1_1:4986726-4986745 | None:intergenic | 40.0% | |
| TTGTGTGTTACAGACTGAGA+AGG | + | chr1_1:4986907-4986926 | Msa0002790:intron | 40.0% | |
| ! | TTTGGTAGCTCAAAGAAGAG+TGG | + | chr1_1:4987054-4987073 | Msa0002790:intron | 40.0% |
| ! | TTGGTAGCTCAAAGAAGAGT+GGG | + | chr1_1:4987055-4987074 | Msa0002790:intron | 40.0% |
| AACCGCTTCTTTAAATCCGT+TGG | + | chr1_1:4987105-4987124 | Msa0002790:CDS | 40.0% | |
| ! | GACCAACGGATTTAAAGAAG+CGG | - | chr1_1:4987110-4987129 | None:intergenic | 40.0% |
| !! | GCCTTTGAGTTTTGGCATAA+TGG | + | chr1_1:4987461-4987480 | Msa0002790:intron | 40.0% |
| GCCATTATGCCAAAACTCAA+AGG | - | chr1_1:4987465-4987484 | None:intergenic | 40.0% | |
| CTAGGGATATCGAAAACCAT+TGG | - | chr1_1:4987886-4987905 | None:intergenic | 40.0% | |
| TGTTGTCATTGATCGTGTCA+TGG | + | chr1_1:4987916-4987935 | Msa0002790:intron | 40.0% | |
| TTACTGGCAATGTTTCCATC+CGG | + | chr1_1:4988207-4988226 | Msa0002790:CDS | 40.0% | |
| GTCACAGTGCTAAGATGAAT+AGG | + | chr1_1:4988252-4988271 | Msa0002790:CDS | 40.0% | |
| CATGATCTCCTTCCTTAACA+CGG | - | chr1_1:4988464-4988483 | None:intergenic | 40.0% | |
| TGTGTGTGTGTGTGTGTAAA+CGG | + | chr1_1:4988561-4988580 | Msa0002790:intron | 40.0% | |
| ! | TGTCGTTGGATACAAGTTGA+AGG | + | chr1_1:4988814-4988833 | Msa0002790:three_prime_UTR | 40.0% |
| AATCGGGTTCATTATTGCTC+CGG | + | chr1_1:4986661-4986680 | Msa0002790:five_prime_UTR | 40.0% | |
| !! | ATTTCGCCATTTTACTGGAC+CGG | - | chr1_1:4986683-4986702 | None:intergenic | 40.0% |
| ACCCTCTCACTGAAATTTGT+TGG | - | chr1_1:4986726-4986745 | None:intergenic | 40.0% | |
| TTGTGTGTTACAGACTGAGA+AGG | + | chr1_1:4986907-4986926 | Msa0002790:intron | 40.0% | |
| ! | TTTGGTAGCTCAAAGAAGAG+TGG | + | chr1_1:4987054-4987073 | Msa0002790:intron | 40.0% |
| ! | TTGGTAGCTCAAAGAAGAGT+GGG | + | chr1_1:4987055-4987074 | Msa0002790:intron | 40.0% |
| AACCGCTTCTTTAAATCCGT+TGG | + | chr1_1:4987105-4987124 | Msa0002790:CDS | 40.0% | |
| ! | GACCAACGGATTTAAAGAAG+CGG | - | chr1_1:4987110-4987129 | None:intergenic | 40.0% |
| !! | GCCTTTGAGTTTTGGCATAA+TGG | + | chr1_1:4987461-4987480 | Msa0002790:intron | 40.0% |
| GCCATTATGCCAAAACTCAA+AGG | - | chr1_1:4987465-4987484 | None:intergenic | 40.0% | |
| CTAGGGATATCGAAAACCAT+TGG | - | chr1_1:4987886-4987905 | None:intergenic | 40.0% | |
| TGTTGTCATTGATCGTGTCA+TGG | + | chr1_1:4987916-4987935 | Msa0002790:intron | 40.0% | |
| TTACTGGCAATGTTTCCATC+CGG | + | chr1_1:4988207-4988226 | Msa0002790:CDS | 40.0% | |
| GTCACAGTGCTAAGATGAAT+AGG | + | chr1_1:4988252-4988271 | Msa0002790:CDS | 40.0% | |
| CATGATCTCCTTCCTTAACA+CGG | - | chr1_1:4988464-4988483 | None:intergenic | 40.0% | |
| TGTGTGTGTGTGTGTGTAAA+CGG | + | chr1_1:4988561-4988580 | Msa0002790:intron | 40.0% | |
| ! | TGTCGTTGGATACAAGTTGA+AGG | + | chr1_1:4988814-4988833 | Msa0002790:three_prime_UTR | 40.0% |
| ATTGCTCCGGTCCAGTAAAA+TGG | + | chr1_1:4986674-4986693 | Msa0002790:five_prime_UTR | 45.0% | |
| ATTCCGAAGCTTCTTCACCA+TGG | + | chr1_1:4986788-4986807 | Msa0002790:exon | 45.0% | |
| AGCTCAAAGAAGAGTGGGAA+AGG | + | chr1_1:4987060-4987079 | Msa0002790:intron | 45.0% | |
| AGAAGAGTGGGAAAGGAAAG+AGG | + | chr1_1:4987067-4987086 | Msa0002790:CDS | 45.0% | |
| AAAGGAAAGAGGCCTGGAAA+AGG | + | chr1_1:4987078-4987097 | Msa0002790:CDS | 45.0% | |
| GAACCTTCAATGGCTTCTCT+GGG | - | chr1_1:4987147-4987166 | None:intergenic | 45.0% | |
| CAATCGCAGGTTCATCATTC+AGG | - | chr1_1:4987533-4987552 | None:intergenic | 45.0% | |
| GACTATGGATCTTCAATCGC+AGG | - | chr1_1:4987546-4987565 | None:intergenic | 45.0% | |
| GTGTCATGGCATCATCTACT+TGG | + | chr1_1:4987930-4987949 | Msa0002790:intron | 45.0% | |
| ACACGATCAACGACAACAAG+TGG | - | chr1_1:4987969-4987988 | None:intergenic | 45.0% | |
| TGTTGTCGTTGATCGTGTCA+TGG | + | chr1_1:4987971-4987990 | Msa0002790:intron | 45.0% | |
| GTGTCATGGCATCATCTACT+TGG | + | chr1_1:4987930-4987949 | Msa0002790:intron | 45.0% | |
| ! | AGGGCACTTCTTGTCAATGT+AGG | - | chr1_1:4988186-4988205 | None:intergenic | 45.0% |
| !!! | GACAAGAAGTGCCCTTTTAC+TGG | + | chr1_1:4988191-4988210 | Msa0002790:CDS | 45.0% |
| TACTGGCAATGTTTCCATCC+GGG | + | chr1_1:4988208-4988227 | Msa0002790:CDS | 45.0% | |
| CAATGCAGGTGAGACTCAAT+AGG | + | chr1_1:4988495-4988514 | Msa0002790:intron | 45.0% | |
| ATTGCTCCGGTCCAGTAAAA+TGG | + | chr1_1:4986674-4986693 | Msa0002790:five_prime_UTR | 45.0% | |
| ATTCCGAAGCTTCTTCACCA+TGG | + | chr1_1:4986788-4986807 | Msa0002790:exon | 45.0% | |
| AGCTCAAAGAAGAGTGGGAA+AGG | + | chr1_1:4987060-4987079 | Msa0002790:intron | 45.0% | |
| AGAAGAGTGGGAAAGGAAAG+AGG | + | chr1_1:4987067-4987086 | Msa0002790:CDS | 45.0% | |
| AAAGGAAAGAGGCCTGGAAA+AGG | + | chr1_1:4987078-4987097 | Msa0002790:CDS | 45.0% | |
| GAACCTTCAATGGCTTCTCT+GGG | - | chr1_1:4987147-4987166 | None:intergenic | 45.0% | |
| CAATCGCAGGTTCATCATTC+AGG | - | chr1_1:4987533-4987552 | None:intergenic | 45.0% | |
| GACTATGGATCTTCAATCGC+AGG | - | chr1_1:4987546-4987565 | None:intergenic | 45.0% | |
| GTGTCATGGCATCATCTACT+TGG | + | chr1_1:4987930-4987949 | Msa0002790:intron | 45.0% | |
| ACACGATCAACGACAACAAG+TGG | - | chr1_1:4987969-4987988 | None:intergenic | 45.0% | |
| TGTTGTCGTTGATCGTGTCA+TGG | + | chr1_1:4987971-4987990 | Msa0002790:intron | 45.0% | |
| GTGTCATGGCATCATCTACT+TGG | + | chr1_1:4987930-4987949 | Msa0002790:intron | 45.0% | |
| ! | AGGGCACTTCTTGTCAATGT+AGG | - | chr1_1:4988186-4988205 | None:intergenic | 45.0% |
| !!! | GACAAGAAGTGCCCTTTTAC+TGG | + | chr1_1:4988191-4988210 | Msa0002790:CDS | 45.0% |
| TACTGGCAATGTTTCCATCC+GGG | + | chr1_1:4988208-4988227 | Msa0002790:CDS | 45.0% | |
| CAATGCAGGTGAGACTCAAT+AGG | + | chr1_1:4988495-4988514 | Msa0002790:intron | 45.0% | |
| !! | AAAATAAAAAAAATCATAAA+AGG | - | chr1_1:4988152-4988171 | None:intergenic | 5.0% |
| !! | AAAATAAAAAAAATCATAAA+AGG | - | chr1_1:4988152-4988171 | None:intergenic | 5.0% |
| !!! | AGTGAGAGGGTTTTCGAGTG+CGG | + | chr1_1:4986735-4986754 | Msa0002790:five_prime_UTR | 50.0% |
| GAAGCTTCGGAATTTCGCAG+AGG | - | chr1_1:4986781-4986800 | None:intergenic | 50.0% | |
| CAGCCATGGTGAAGAAGCTT+CGG | - | chr1_1:4986794-4986813 | None:intergenic | 50.0% | |
| ! | AAGCGGTTTCCACCTTTTCC+AGG | - | chr1_1:4987093-4987112 | None:intergenic | 50.0% |
| ACTCCCAGAGAAGCCATTGA+AGG | + | chr1_1:4987141-4987160 | Msa0002790:CDS | 50.0% | |
| GGAACCTTCAATGGCTTCTC+TGG | - | chr1_1:4987148-4987167 | None:intergenic | 50.0% | |
| ACTGGCAATGTTTCCATCCG+GGG | + | chr1_1:4988209-4988228 | Msa0002790:CDS | 50.0% | |
| TTCCAGCTAAAATACGGCCC+CGG | - | chr1_1:4988229-4988248 | None:intergenic | 50.0% | |
| AAGCAGGGTGATACATGAGC+AGG | - | chr1_1:4988441-4988460 | None:intergenic | 50.0% | |
| ATCACCCTGCTTCCGTGTTA+AGG | + | chr1_1:4988449-4988468 | Msa0002790:CDS | 50.0% | |
| CCTTCCTTAACACGGAAGCA+GGG | - | chr1_1:4988456-4988475 | None:intergenic | 50.0% | |
| TCCTTCCTTAACACGGAAGC+AGG | - | chr1_1:4988457-4988476 | None:intergenic | 50.0% | |
| TGCAGGTGAGACTCAATAGG+AGG | + | chr1_1:4988498-4988517 | Msa0002790:intron | 50.0% | |
| TGGAGAGAGGCCTGATGAAA+TGG | - | chr1_1:4988627-4988646 | None:intergenic | 50.0% | |
| AACCTCACAGTCTTGGAGAG+AGG | - | chr1_1:4988640-4988659 | None:intergenic | 50.0% | |
| GACGTTGAACCTCACAGTCT+TGG | - | chr1_1:4988647-4988666 | None:intergenic | 50.0% | |
| GTCTTGAAAGTGATCCCAGC+TGG | + | chr1_1:4988664-4988683 | Msa0002790:CDS | 50.0% | |
| !! | GCTGGGAAGAAGGCATTTAC+TGG | + | chr1_1:4988700-4988719 | Msa0002790:CDS | 50.0% |
| !!! | AGTGAGAGGGTTTTCGAGTG+CGG | + | chr1_1:4986735-4986754 | Msa0002790:five_prime_UTR | 50.0% |
| GAAGCTTCGGAATTTCGCAG+AGG | - | chr1_1:4986781-4986800 | None:intergenic | 50.0% | |
| CAGCCATGGTGAAGAAGCTT+CGG | - | chr1_1:4986794-4986813 | None:intergenic | 50.0% | |
| ! | AAGCGGTTTCCACCTTTTCC+AGG | - | chr1_1:4987093-4987112 | None:intergenic | 50.0% |
| ACTCCCAGAGAAGCCATTGA+AGG | + | chr1_1:4987141-4987160 | Msa0002790:CDS | 50.0% | |
| GGAACCTTCAATGGCTTCTC+TGG | - | chr1_1:4987148-4987167 | None:intergenic | 50.0% | |
| ACTGGCAATGTTTCCATCCG+GGG | + | chr1_1:4988209-4988228 | Msa0002790:CDS | 50.0% | |
| TTCCAGCTAAAATACGGCCC+CGG | - | chr1_1:4988229-4988248 | None:intergenic | 50.0% | |
| AAGCAGGGTGATACATGAGC+AGG | - | chr1_1:4988441-4988460 | None:intergenic | 50.0% | |
| ATCACCCTGCTTCCGTGTTA+AGG | + | chr1_1:4988449-4988468 | Msa0002790:CDS | 50.0% | |
| CCTTCCTTAACACGGAAGCA+GGG | - | chr1_1:4988456-4988475 | None:intergenic | 50.0% | |
| TCCTTCCTTAACACGGAAGC+AGG | - | chr1_1:4988457-4988476 | None:intergenic | 50.0% | |
| TGCAGGTGAGACTCAATAGG+AGG | + | chr1_1:4988498-4988517 | Msa0002790:intron | 50.0% | |
| TGGAGAGAGGCCTGATGAAA+TGG | - | chr1_1:4988627-4988646 | None:intergenic | 50.0% | |
| AACCTCACAGTCTTGGAGAG+AGG | - | chr1_1:4988640-4988659 | None:intergenic | 50.0% | |
| GACGTTGAACCTCACAGTCT+TGG | - | chr1_1:4988647-4988666 | None:intergenic | 50.0% | |
| GTCTTGAAAGTGATCCCAGC+TGG | + | chr1_1:4988664-4988683 | Msa0002790:CDS | 50.0% | |
| !! | GCTGGGAAGAAGGCATTTAC+TGG | + | chr1_1:4988700-4988719 | Msa0002790:CDS | 50.0% |
| AGTGGGAAAGGAAAGAGGCC+TGG | + | chr1_1:4987072-4987091 | Msa0002790:CDS | 55.0% | |
| GGAAAGAGGCCTGGAAAAGG+TGG | + | chr1_1:4987081-4987100 | Msa0002790:CDS | 55.0% | |
| AGCTAAAATACGGCCCCGGA+TGG | - | chr1_1:4988225-4988244 | None:intergenic | 55.0% | |
| !!! | ATCCGGGGCCGTATTTTAGC+TGG | + | chr1_1:4988224-4988243 | Msa0002790:CDS | 55.0% |
| CCCTGCTTCCGTGTTAAGGA+AGG | + | chr1_1:4988453-4988472 | Msa0002790:CDS | 55.0% | |
| ! | ATCCCAGCTGGTTCATCCAG+TGG | + | chr1_1:4988676-4988695 | Msa0002790:CDS | 55.0% |
| CACCACTGGATGAACCAGCT+GGG | - | chr1_1:4988681-4988700 | None:intergenic | 55.0% | |
| CTGGTTCATCCAGTGGTGCT+GGG | + | chr1_1:4988683-4988702 | Msa0002790:CDS | 55.0% | |
| ! | ATCCAGTGGTGCTGGGAAGA+AGG | + | chr1_1:4988690-4988709 | Msa0002790:CDS | 55.0% |
| AGTGGGAAAGGAAAGAGGCC+TGG | + | chr1_1:4987072-4987091 | Msa0002790:CDS | 55.0% | |
| GGAAAGAGGCCTGGAAAAGG+TGG | + | chr1_1:4987081-4987100 | Msa0002790:CDS | 55.0% | |
| AGCTAAAATACGGCCCCGGA+TGG | - | chr1_1:4988225-4988244 | None:intergenic | 55.0% | |
| !!! | ATCCGGGGCCGTATTTTAGC+TGG | + | chr1_1:4988224-4988243 | Msa0002790:CDS | 55.0% |
| CCCTGCTTCCGTGTTAAGGA+AGG | + | chr1_1:4988453-4988472 | Msa0002790:CDS | 55.0% | |
| ! | ATCCCAGCTGGTTCATCCAG+TGG | + | chr1_1:4988676-4988695 | Msa0002790:CDS | 55.0% |
| CACCACTGGATGAACCAGCT+GGG | - | chr1_1:4988681-4988700 | None:intergenic | 55.0% | |
| CTGGTTCATCCAGTGGTGCT+GGG | + | chr1_1:4988683-4988702 | Msa0002790:CDS | 55.0% | |
| ! | ATCCAGTGGTGCTGGGAAGA+AGG | + | chr1_1:4988690-4988709 | Msa0002790:CDS | 55.0% |
| GGCCTCTCTCCAAGACTGTG+AGG | + | chr1_1:4988635-4988654 | Msa0002790:intron | 60.0% | |
| GCACCACTGGATGAACCAGC+TGG | - | chr1_1:4988682-4988701 | None:intergenic | 60.0% | |
| ! | GCTGGTTCATCCAGTGGTGC+TGG | + | chr1_1:4988682-4988701 | Msa0002790:CDS | 60.0% |
| TGCCTTCTTCCCAGCACCAC+TGG | - | chr1_1:4988695-4988714 | None:intergenic | 60.0% | |
| GGCCTCTCTCCAAGACTGTG+AGG | + | chr1_1:4988635-4988654 | Msa0002790:intron | 60.0% | |
| GCACCACTGGATGAACCAGC+TGG | - | chr1_1:4988682-4988701 | None:intergenic | 60.0% | |
| ! | GCTGGTTCATCCAGTGGTGC+TGG | + | chr1_1:4988682-4988701 | Msa0002790:CDS | 60.0% |
| TGCCTTCTTCCCAGCACCAC+TGG | - | chr1_1:4988695-4988714 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 4986644 | 4989003 | 4986644 | ID=Msa0002790;Name=Msa0002790 |
| chr1_1 | mRNA | 4986644 | 4989003 | 4986644 | ID=Msa0002790-mRNA-1;Parent=Msa0002790;Name=Msa0002790-mRNA-1;_AED=0.07;_eAED=0.07;_QI=163|1|1|1|0.83|0.71|7|245|160 |
| chr1_1 | exon | 4986644 | 4986818 | 4986644 | ID=Msa0002790-mRNA-1:exon:1484;Parent=Msa0002790-mRNA-1 |
| chr1_1 | exon | 4986920 | 4986960 | 4986920 | ID=Msa0002790-mRNA-1:exon:1485;Parent=Msa0002790-mRNA-1 |
| chr1_1 | exon | 4987062 | 4987162 | 4987062 | ID=Msa0002790-mRNA-1:exon:1486;Parent=Msa0002790-mRNA-1 |
| chr1_1 | exon | 4988180 | 4988324 | 4988180 | ID=Msa0002790-mRNA-1:exon:1487;Parent=Msa0002790-mRNA-1 |
| chr1_1 | exon | 4988413 | 4988502 | 4988413 | ID=Msa0002790-mRNA-1:exon:1488;Parent=Msa0002790-mRNA-1 |
| chr1_1 | exon | 4988636 | 4988886 | 4988636 | ID=Msa0002790-mRNA-1:exon:1489;Parent=Msa0002790-mRNA-1 |
| chr1_1 | exon | 4988916 | 4989003 | 4988916 | ID=Msa0002790-mRNA-1:exon:1490;Parent=Msa0002790-mRNA-1 |
| chr1_1 | five_prime_UTR | 4986644 | 4986806 | 4986644 | ID=Msa0002790-mRNA-1:five_prime_utr;Parent=Msa0002790-mRNA-1 |
| chr1_1 | CDS | 4986807 | 4986818 | 4986807 | ID=Msa0002790-mRNA-1:cds;Parent=Msa0002790-mRNA-1 |
| chr1_1 | CDS | 4986920 | 4986960 | 4986920 | ID=Msa0002790-mRNA-1:cds;Parent=Msa0002790-mRNA-1 |
| chr1_1 | CDS | 4987062 | 4987162 | 4987062 | ID=Msa0002790-mRNA-1:cds;Parent=Msa0002790-mRNA-1 |
| chr1_1 | CDS | 4988180 | 4988324 | 4988180 | ID=Msa0002790-mRNA-1:cds;Parent=Msa0002790-mRNA-1 |
| chr1_1 | CDS | 4988413 | 4988502 | 4988413 | ID=Msa0002790-mRNA-1:cds;Parent=Msa0002790-mRNA-1 |
| chr1_1 | CDS | 4988636 | 4988729 | 4988636 | ID=Msa0002790-mRNA-1:cds;Parent=Msa0002790-mRNA-1 |
| chr1_1 | three_prime_UTR | 4988730 | 4988886 | 4988730 | ID=Msa0002790-mRNA-1:three_prime_utr;Parent=Msa0002790-mRNA-1 |
| chr1_1 | three_prime_UTR | 4988916 | 4989003 | 4988916 | ID=Msa0002790-mRNA-1:three_prime_utr;Parent=Msa0002790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
