AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0223330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223330 MtrunA17_Chr2g0328671 91.781 438 14 1 1 416 1 438 0.0 787
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223330 AT5G59210.1 61.697 436 142 4 1 415 1 432 3.63e-176 499
Msa0223330 AT5G59210.2 61.009 436 144 4 1 415 1 431 8.91e-174 493

Find 109 sgRNAs with CRISPR-Local

Find 555 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCATTTGTCATCAAATT+AGG 0.183216 2_1:+72868126 None:intergenic
CTCGTGTACCTCGTTCTTAA+TGG 0.224009 2_1:+72868893 None:intergenic
TGAGCTAGCTGGTTTAAAAT+TGG 0.235728 2_1:-72871903 Msa0223330:CDS
ACCTCGTTCTTAATGGATTC+TGG 0.270163 2_1:+72868900 None:intergenic
CATCCTTAAGACGTTTCTTC+AGG 0.287567 2_1:+72872156 None:intergenic
GTTCATTGGTTGTACGATAA+TGG 0.302872 2_1:-72868193 Msa0223330:exon
AAGATGTGTATCCTCGTTAT+AGG 0.306317 2_1:-72867865 Msa0223330:three_prime_UTR
AATTCCCTTCGCCGCCCCTT+TGG 0.307961 2_1:+72875086 None:intergenic
ATTCCCTTCGCCGCCCCTTT+GGG 0.311102 2_1:+72875087 None:intergenic
AGATTGGTTAAAGCCTCTTC+TGG 0.341562 2_1:-72874858 Msa0223330:CDS
CATGCAACTAACTTTGCTTC+AGG 0.352933 2_1:-72875170 Msa0223330:five_prime_UTR
AAAATACGGTACCATCTCTT+AGG 0.354192 2_1:-72872337 Msa0223330:CDS
TAGCTAACTGTTCTTGCCCC+TGG 0.370428 2_1:+72871765 None:intergenic
TGTTCTTTACATATTAATCT+TGG 0.374581 2_1:+72867976 None:intergenic
TGATAAGCAGTTGCATGATA+TGG 0.395775 2_1:-72869948 Msa0223330:CDS
CAAATTCATGTGTATAACAT+AGG 0.403460 2_1:+72868019 None:intergenic
CATCTCTTAGGAAAGCTCTC+AGG 0.408962 2_1:-72872325 Msa0223330:CDS
AGTCCTAATTTGATGACAAA+TGG 0.412547 2_1:-72868129 Msa0223330:three_prime_UTR
CAAACGATGGAAATTGATAA+TGG 0.414063 2_1:-72872566 Msa0223330:CDS
GAGCAGGGTGTTTCAGTAAC+TGG 0.430456 2_1:-72868066 Msa0223330:three_prime_UTR
AATTCATATCAAGAGGCAAT+TGG 0.436621 2_1:-72869730 Msa0223330:CDS
AATGAAGCAAGACAGTTCAT+TGG 0.436705 2_1:-72868207 Msa0223330:CDS
AGATGTGTATCCTCGTTATA+GGG 0.444925 2_1:-72867864 Msa0223330:three_prime_UTR
AAAGAACAGGCACTAACAAA+TGG 0.449730 2_1:-72867961 Msa0223330:three_prime_UTR
TTTGTTCATGCAGAAGTCTC+AGG 0.450124 2_1:-72871190 Msa0223330:intron
AAGAACAGGCACTAACAAAT+GGG 0.450565 2_1:-72867960 Msa0223330:three_prime_UTR
AAGATTAATATGTAAAGAAC+AGG 0.456386 2_1:-72867974 Msa0223330:three_prime_UTR
ATGAGTTGGATGAAGAAAAC+AGG 0.456410 2_1:-72872698 Msa0223330:CDS
TACCCTGAAGAAACGTCTTA+AGG 0.456445 2_1:-72872159 Msa0223330:CDS
TGGTCGGGTGGACCAATAGA+TGG 0.457820 2_1:+72871947 None:intergenic
CAGTAGACAGAAACTTCTAA+TGG 0.462491 2_1:-72869900 Msa0223330:CDS
TGGTTTAAAATTGGAACTAC+AGG 0.466540 2_1:-72871894 Msa0223330:intron
AAAACCCAAAGGGGCGGCGA+AGG 0.466659 2_1:-72875091 Msa0223330:five_prime_UTR
TGCTCAGTTCCTTCACAAGT+TGG 0.467221 2_1:+72868468 None:intergenic
GTTAGTACAATACCATCTAT+TGG 0.468879 2_1:-72871959 Msa0223330:CDS
ATCCTTAAGACGTTTCTTCA+GGG 0.470102 2_1:+72872157 None:intergenic
TGAGTCACTGATGAGGCACC+AGG 0.470593 2_1:-72871783 Msa0223330:CDS
CTTTCAATGTTGCGCAGCAC+TGG 0.474455 2_1:+72868242 None:intergenic
GTCGGAACCTGGCTTAGATC+TGG 0.480545 2_1:+72874834 None:intergenic
AAAGAGAGCACAGGATAGAT+TGG 0.482201 2_1:-72874874 Msa0223330:CDS
ATTCCTGCAGGAGCAAAATA+CGG 0.482916 2_1:-72872351 Msa0223330:intron
GTTGGTTCCTCGACATCTAC+AGG 0.485383 2_1:-72868870 Msa0223330:CDS
GCACAAGCAGTTGAATGAAC+TGG 0.485805 2_1:-72872537 Msa0223330:intron
GTTTCAGTAACTGGCTGTGA+CGG 0.490171 2_1:-72868057 Msa0223330:three_prime_UTR
AATTGGAGCAGCAGCAAGAT+GGG 0.496142 2_1:-72869713 Msa0223330:CDS
AACTCAGAAGACATTCACTA+TGG 0.497995 2_1:-72871161 Msa0223330:intron
CCTCCATTGTTACCCACGAC+GGG 0.500866 2_1:+72875042 None:intergenic
AATATTTGAAGATGGTGGTC+GGG 0.503219 2_1:+72871932 None:intergenic
GGCGTTAGCTGTAGAGAGGT+TGG 0.514417 2_1:-72869927 Msa0223330:CDS
ATCTCTTAGGAAAGCTCTCA+GGG 0.515469 2_1:-72872324 Msa0223330:CDS
GATGTCTGAAAAGCAAGAGT+TGG 0.521117 2_1:-72871717 Msa0223330:CDS
CAATTGGAGCAGCAGCAAGA+TGG 0.521758 2_1:-72869714 Msa0223330:CDS
AAATTCATGTGTATAACATA+GGG 0.523492 2_1:+72868020 None:intergenic
GGGTACGAAGCTGCGCTGAA+AGG 0.526422 2_1:+72872177 None:intergenic
AATGGATTCTGGTAAGCCAT+TGG 0.528969 2_1:+72868911 None:intergenic
AGCAAAATGAAGAGCTGCGT+GGG 0.529017 2_1:-72868962 Msa0223330:CDS
TTTGCATCAGATTTCTTCAT+CGG 0.529569 2_1:-72875118 Msa0223330:five_prime_UTR
CAAGTCAAACAAGCATATGA+TGG 0.532289 2_1:-72868395 Msa0223330:CDS
GCAAAGGAAGAACAATGAGT+TGG 0.533565 2_1:-72872712 Msa0223330:CDS
TATAAAATTGATATGAACAA+TGG 0.536998 2_1:+72868095 None:intergenic
TAATATTTGAAGATGGTGGT+CGG 0.537953 2_1:+72871931 None:intergenic
ATATTAGAAAATGAGCTAGC+TGG 0.539429 2_1:-72871914 Msa0223330:CDS
CTCAAATAAAAGTTCTGCAA+AGG 0.540173 2_1:-72872728 Msa0223330:CDS
TTTCAGTAACTGGCTGTGAC+GGG 0.540362 2_1:-72868056 Msa0223330:three_prime_UTR
GAGGCTCGTCATGCATCTCT+AGG 0.542218 2_1:-72875023 Msa0223330:CDS
TTTCTAATATTTGAAGATGG+TGG 0.548198 2_1:+72871927 None:intergenic
AGCAGCAAGATGGGAAAACC+AGG 0.551181 2_1:-72869704 Msa0223330:intron
AAACCCAAAGGGGCGGCGAA+GGG 0.551283 2_1:-72875090 Msa0223330:five_prime_UTR
TCTCTCAAATTCATATCAAG+AGG 0.556927 2_1:-72869737 Msa0223330:CDS
TTCTGGACCAGATCTAAGCC+AGG 0.557069 2_1:-72874841 Msa0223330:intron
AGGAGAGGTGGCATCTCTGA+AGG 0.562380 2_1:-72868850 Msa0223330:intron
AGCTCTCAGGGATGTTGCAA+TGG 0.563071 2_1:-72872312 Msa0223330:CDS
GTGCTGCGCAACATTGAAAG+TGG 0.568193 2_1:-72868239 Msa0223330:CDS
CTGAGAGCTTTCCTAAGAGA+TGG 0.572357 2_1:+72872326 None:intergenic
TTGGCAGGGCCAACTTGTGA+AGG 0.574471 2_1:-72868477 Msa0223330:intron
ACCTGCAGCCTCTCTTGACA+TGG 0.574630 2_1:+72871679 None:intergenic
ACGTCTTAAGGATGCTGAAG+AGG 0.580391 2_1:-72872147 Msa0223330:CDS
AAACAGGAAAATAACTTCGA+AGG 0.586204 2_1:-72872682 Msa0223330:intron
AAGAACGAGGTACACGAGGT+TGG 0.590666 2_1:-72868888 Msa0223330:CDS
AATTCGTCAAAAGAGAGCAC+AGG 0.597702 2_1:-72874883 Msa0223330:CDS
ATTTGAAGATGGTGGTCGGG+TGG 0.600067 2_1:+72871935 None:intergenic
TTACCCTCTAGTTTAATACC+AGG 0.600543 2_1:-72867800 Msa0223330:three_prime_UTR
GCTTAGATCTGGTCCAGAAG+AGG 0.601055 2_1:+72874845 None:intergenic
ATTAAACTCCATGTCAAGAG+AGG 0.604029 2_1:-72871687 Msa0223330:CDS
CTCGACATCTACAGGAGAGG+TGG 0.609171 2_1:-72868862 Msa0223330:CDS
CACCTCTCCTGTAGATGTCG+AGG 0.610163 2_1:+72868863 None:intergenic
ACTTCCTGGTATTAAACTAG+AGG 0.610877 2_1:+72867796 None:intergenic
CCCGTCGTGGGTAACAATGG+AGG 0.617638 2_1:-72875042 Msa0223330:exon
ATTGTTGCAGCTTCAAACGA+TGG 0.618151 2_1:-72872579 Msa0223330:intron
TTACGAGTGGAACAGGCCAA+TGG 0.620799 2_1:-72868927 Msa0223330:CDS
CTCCATTGTTACCCACGACG+GGG 0.625665 2_1:+72875043 None:intergenic
GCCTCCATTGTTACCCACGA+CGG 0.628775 2_1:+72875041 None:intergenic
GAAGGAACTGAGCAGAGCAG+AGG 0.632473 2_1:-72868459 Msa0223330:CDS
GAGTCACTGATGAGGCACCA+GGG 0.634929 2_1:-72871782 Msa0223330:CDS
AGTCACTGATGAGGCACCAG+GGG 0.636835 2_1:-72871781 Msa0223330:CDS
CTTCCTGGTATTAAACTAGA+GGG 0.644502 2_1:+72867797 None:intergenic
TGCATCTCTAGGTCGACGAA+CGG 0.654276 2_1:-72875012 Msa0223330:intron
CATTAAGAACGAGGTACACG+AGG 0.655744 2_1:-72868892 Msa0223330:CDS
TAGACAGAAACTTCTAATGG+AGG 0.657126 2_1:-72869897 Msa0223330:intron
AAGCAAAATGAAGAGCTGCG+TGG 0.661738 2_1:-72868963 Msa0223330:CDS
TCCATGTCAAGAGAGGCTGC+AGG 0.662258 2_1:-72871680 Msa0223330:intron
TTGTTATGCACCCTATAACG+AGG 0.668672 2_1:+72867854 None:intergenic
TCCATTGTTACCCACGACGG+GGG 0.669445 2_1:+72875044 None:intergenic
CAGACATCAGTGATGCAATG+CGG 0.670305 2_1:+72871732 None:intergenic
AGAACAGGCACTAACAAATG+GGG 0.676074 2_1:-72867959 Msa0223330:three_prime_UTR
TTCCTCGACATCTACAGGAG+AGG 0.677582 2_1:-72868865 Msa0223330:CDS
ATATGGCGTTAGCTGTAGAG+AGG 0.679585 2_1:-72869931 Msa0223330:CDS
ACCAGAATCCATTAAGAACG+AGG 0.708984 2_1:-72868901 Msa0223330:CDS
TACAGCGTGAGTCACTGATG+AGG 0.718845 2_1:-72871790 Msa0223330:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAAAAAATAAAAA+TGG + chr2_1:72870006-72870025 None:intergenic 0.0%
!!! TTTTTTTTCTTTTTTCTTTT+TGG + chr2_1:72867848-72867867 None:intergenic 10.0%
!! TAAAAATTGAAAGAATAAAA+TGG + chr2_1:72869297-72869316 None:intergenic 10.0%
!! AAAAAGGAAATTAAATTAAA+GGG + chr2_1:72871150-72871169 None:intergenic 10.0%
!! AAAAAAGGAAATTAAATTAA+AGG + chr2_1:72871151-72871170 None:intergenic 10.0%
!!! GATAAAATCTAAAATTATAA+AGG + chr2_1:72872509-72872528 None:intergenic 10.0%
!! TTTCTACTAAATAATAAATA+GGG + chr2_1:72873428-72873447 None:intergenic 10.0%
!!! TTTTCTACTAAATAATAAAT+AGG + chr2_1:72873429-72873448 None:intergenic 10.0%
!! AGTGATATATTATATTATTA+TGG - chr2_1:72873738-72873757 Msa0223330:intron 10.0%
!!! TCATATCAATTTTATAAAAA+TGG - chr2_1:72874900-72874919 Msa0223330:intron 10.0%
!!! TTACATTTCTTTTTAAGTTA+CGG - chr2_1:72868546-72868565 Msa0223330:intron 15.0%
!!! TACTTTTGTACTTTAAATTA+CGG + chr2_1:72869539-72869558 None:intergenic 15.0%
!!! AACTTTTATTTGAGATAATA+GGG + chr2_1:72870254-72870273 None:intergenic 15.0%
!! AAAAGGAAATTAAATTAAAG+GGG + chr2_1:72871149-72871168 None:intergenic 15.0%
!!! TTTAGTGAATTTTCAATATT+TGG - chr2_1:72871868-72871887 Msa0223330:intron 15.0%
!! ATGTATTCTTCAAAAAAAAA+AGG + chr2_1:72872105-72872124 None:intergenic 15.0%
!!! CACAAAATATTTTAAGAAAA+TGG + chr2_1:72872229-72872248 None:intergenic 15.0%
!!! CATTTTCTTAAAATATTTTG+TGG - chr2_1:72872227-72872246 Msa0223330:intron 15.0%
!!! TCTAATATGTTTTTGTTTAA+TGG - chr2_1:72872978-72872997 Msa0223330:intron 15.0%
!! TCAAATAAAATATTAAACCA+AGG + chr2_1:72873379-72873398 None:intergenic 15.0%
!! ATTATTTAGTAGAAAAATAC+TGG - chr2_1:72873433-72873452 Msa0223330:intron 15.0%
!! TTAAAAATGAAATCTATTCT+GGG - chr2_1:72873587-72873606 Msa0223330:intron 15.0%
!! CATAAATATATAAACATTGT+CGG + chr2_1:72873884-72873903 None:intergenic 15.0%
!! TTTCAAAAAAAAACATGAAT+TGG + chr2_1:72874209-72874228 None:intergenic 15.0%
!!! TTCATGTTTTTTTTTGAAAA+TGG - chr2_1:72874210-72874229 Msa0223330:intron 15.0%
!! TATAAAATTGATATGAACAA+TGG + chr2_1:72874896-72874915 None:intergenic 15.0%
!! AATCAAAAATTGAAGATGAA+AGG + chr2_1:72868038-72868057 None:intergenic 20.0%
!! TAAAATAAAACAAGTGTGAT+TGG - chr2_1:72868804-72868823 Msa0223330:intron 20.0%
!!! TTTAAAACTTGAAACAAACA+TGG + chr2_1:72869833-72869852 None:intergenic 20.0%
!! AAAATGGAAATAAATGTTGA+TGG + chr2_1:72869990-72870009 None:intergenic 20.0%
!!! TTAATTTCTAAAACATTCCA+AGG - chr2_1:72870025-72870044 Msa0223330:intron 20.0%
!!! TAAATTTTTACCAAACACAT+GGG - chr2_1:72870053-72870072 Msa0223330:intron 20.0%
!!! GAACTTTTATTTGAGATAAT+AGG + chr2_1:72870255-72870274 None:intergenic 20.0%
!! TGATTAGTAATTACTAACTA+TGG + chr2_1:72870538-72870557 None:intergenic 20.0%
!!! TTTTGTTCTCAAAATCTTAT+TGG - chr2_1:72870923-72870942 Msa0223330:intron 20.0%
!!! CATTTTCTAATATTTGAAGA+TGG + chr2_1:72871067-72871086 None:intergenic 20.0%
!! TAAATAAGAACTTGAATTTG+TGG + chr2_1:72871472-72871491 None:intergenic 20.0%
!!! AAATTCAAGTTCTTATTTAG+TGG - chr2_1:72871473-72871492 Msa0223330:intron 20.0%
!!! TATAAGGCATGTATTTTTTA+AGG + chr2_1:72871559-72871578 None:intergenic 20.0%
!! AAACAGTAAAGTAAATTTCT+TGG + chr2_1:72871917-72871936 None:intergenic 20.0%
!!! TTCTTAAAATATTTTGTGGA+AGG - chr2_1:72872231-72872250 Msa0223330:intron 20.0%
!!! TCTTAAAATATTTTGTGGAA+GGG - chr2_1:72872232-72872251 Msa0223330:intron 20.0%
!! TCGTATATAAACTGTAAAAA+TGG + chr2_1:72872482-72872501 None:intergenic 20.0%
!! TAAACAAAAACATATTAGAC+AGG + chr2_1:72872977-72872996 None:intergenic 20.0%
!! TTCTGACTAAATGTAATTTA+TGG - chr2_1:72873325-72873344 Msa0223330:intron 20.0%
!! TAAATGTAATTTATGGTTTC+TGG - chr2_1:72873332-72873351 Msa0223330:intron 20.0%
!! CTTAAAAATGAAATCTATTC+TGG - chr2_1:72873586-72873605 Msa0223330:intron 20.0%
!! TATTAATAAAAGCAAAAGGA+GGG + chr2_1:72873716-72873735 None:intergenic 20.0%
!! ATATTAATAAAAGCAAAAGG+AGG + chr2_1:72873717-72873736 None:intergenic 20.0%
!! CTGATATTAATAAAAGCAAA+AGG + chr2_1:72873720-72873739 None:intergenic 20.0%
!! AGAAACAAAAAAATTCAGTA+TGG + chr2_1:72873958-72873977 None:intergenic 20.0%
!! TTTATCTATAAGAAACTTCA+AGG - chr2_1:72874414-72874433 Msa0223330:intron 20.0%
!!! AATTTTATAAAAATGGAGCA+GGG - chr2_1:72874907-72874926 Msa0223330:intron 20.0%
!! AAATTCATGTGTATAACATA+GGG + chr2_1:72874971-72874990 None:intergenic 20.0%
!! TGTTCTTTACATATTAATCT+TGG + chr2_1:72875015-72875034 None:intergenic 20.0%
!! AAGATTAATATGTAAAGAAC+AGG - chr2_1:72875014-72875033 Msa0223330:CDS 20.0%
!! ACGACAAACAAAATTGATTT+GGG + chr2_1:72868246-72868265 None:intergenic 25.0%
! AACGACAAACAAAATTGATT+TGG + chr2_1:72868247-72868266 None:intergenic 25.0%
! TACTCAACAATTAAAAAGGA+GGG + chr2_1:72868339-72868358 None:intergenic 25.0%
! AGTACTTATCATAGGAAAAA+TGG - chr2_1:72868443-72868462 Msa0223330:CDS 25.0%
!!! AGTTTTAAAAATTTGTTCCC+AGG - chr2_1:72869844-72869863 Msa0223330:intron 25.0%
! GGTAAAAATTTAGATTTCCT+TGG + chr2_1:72870045-72870064 None:intergenic 25.0%
!! CTAAATTTTTACCAAACACA+TGG - chr2_1:72870052-72870071 Msa0223330:intron 25.0%
! TTTCTAATATTTGAAGATGG+TGG + chr2_1:72871064-72871083 None:intergenic 25.0%
! ATTTAAATTGCCATTAGACA+AGG + chr2_1:72871177-72871196 None:intergenic 25.0%
! TTTAATATAGAATGTCCACA+AGG + chr2_1:72871348-72871367 None:intergenic 25.0%
!! TATCATTTAAGATCAAAGGA+TGG + chr2_1:72871446-72871465 None:intergenic 25.0%
! TCCTTTGATCTTAAATGATA+TGG - chr2_1:72871446-72871465 Msa0223330:intron 25.0%
!!! CTGCTTTTTAAACTAGTAAA+TGG - chr2_1:72871503-72871522 Msa0223330:intron 25.0%
!!! TGTATTTTTTAAGGAGAACA+CGG + chr2_1:72871550-72871569 None:intergenic 25.0%
!! TGATCAATCACGTAAATTTT+TGG - chr2_1:72872180-72872199 Msa0223330:CDS 25.0%
!! CTTAAAATATTTTGTGGAAG+GGG - chr2_1:72872233-72872252 Msa0223330:intron 25.0%
!! TTAAAATATTTTGTGGAAGG+GGG - chr2_1:72872234-72872253 Msa0223330:intron 25.0%
! ATCTCTTTCAATCTTCTTTA+AGG - chr2_1:72872739-72872758 Msa0223330:CDS 25.0%
! GCTTGATATATAAAACACAT+GGG + chr2_1:72872838-72872857 None:intergenic 25.0%
! TGCTTGATATATAAAACACA+TGG + chr2_1:72872839-72872858 None:intergenic 25.0%
! AAAACATATTAGACAGGAAA+TGG + chr2_1:72872971-72872990 None:intergenic 25.0%
!!! AATTTATGGTTTCTGGTTTA+AGG - chr2_1:72873339-72873358 Msa0223330:intron 25.0%
!!! GTTCCTATCATTTTTCTTTT+GGG - chr2_1:72873455-72873474 Msa0223330:intron 25.0%
!!! TTCCTATCATTTTTCTTTTG+GGG - chr2_1:72873456-72873475 Msa0223330:intron 25.0%
!!! CAAGATTTTTTGAACAAACA+AGG + chr2_1:72873656-72873675 None:intergenic 25.0%
!! ATTATATTATTATGGCTTGC+TGG - chr2_1:72873746-72873765 Msa0223330:intron 25.0%
!!! TTTTTTCCTGCATTCTATTT+TGG - chr2_1:72873824-72873843 Msa0223330:intron 25.0%
! AGAACAAATACATTATGAGT+GGG + chr2_1:72874177-72874196 None:intergenic 25.0%
! TAGAACAAATACATTATGAG+TGG + chr2_1:72874178-72874197 None:intergenic 25.0%
!!! TCAGTTGTTATTTTTGTTTG+AGG - chr2_1:72874246-72874265 Msa0223330:intron 25.0%
!!! CAGTTGTTATTTTTGTTTGA+GGG - chr2_1:72874247-72874266 Msa0223330:intron 25.0%
!!! ATTATAGTTTTGAGAACAGA+GGG + chr2_1:72874459-72874478 None:intergenic 25.0%
!!! AATTATAGTTTTGAGAACAG+AGG + chr2_1:72874460-72874479 None:intergenic 25.0%
! GATACAATGAAAAAATAGAG+AGG + chr2_1:72874638-72874657 None:intergenic 25.0%
!! ATTGTGGATTACATTAACAA+AGG + chr2_1:72874712-72874731 None:intergenic 25.0%
! AATCCATTTGTCATCAAATT+AGG + chr2_1:72874865-72874884 None:intergenic 25.0%
!! CAATTTTATAAAAATGGAGC+AGG - chr2_1:72874906-72874925 Msa0223330:intron 25.0%
! CAAATTCATGTGTATAACAT+AGG + chr2_1:72874972-72874991 None:intergenic 25.0%
!!! CTTTTGTAGTTTGATTTTTG+AGG - chr2_1:72875163-72875182 Msa0223330:five_prime_UTR 25.0%
TTTGCATCAGATTTCTTCAT+CGG - chr2_1:72867870-72867889 Msa0223330:three_prime_UTR 30.0%
CTACTCAACAATTAAAAAGG+AGG + chr2_1:72868340-72868359 None:intergenic 30.0%
ACGCTACTCAACAATTAAAA+AGG + chr2_1:72868343-72868362 None:intergenic 30.0%
TAATGTGTGGTAAGAATAGT+CGG - chr2_1:72868386-72868405 Msa0223330:CDS 30.0%
ACTTATCATAGGAAAAATGG+TGG - chr2_1:72868446-72868465 Msa0223330:CDS 30.0%
! AGTGTGATTGGAGTATTATA+TGG - chr2_1:72868816-72868835 Msa0223330:intron 30.0%
ACTTCAAGCAACAATTAAAG+AGG + chr2_1:72869147-72869166 None:intergenic 30.0%
ATCTAATCTATTCTCCTTAC+TGG + chr2_1:72869618-72869637 None:intergenic 30.0%
AGTAAGGAGAATAGATTAGA+TGG - chr2_1:72869617-72869636 Msa0223330:intron 30.0%
AGGTTTGTAATATAATTCCC+TGG - chr2_1:72869772-72869791 Msa0223330:CDS 30.0%
! TGAAACAAACATGGTATTGA+TGG + chr2_1:72869824-72869843 None:intergenic 30.0%
! TTTCTTCTATTGTTATTCCC+AGG - chr2_1:72869902-72869921 Msa0223330:CDS 30.0%
! ATTGTTATTCCCAGGTTTAA+AGG - chr2_1:72869910-72869929 Msa0223330:CDS 30.0%
ATTCCAACAACAAAAACCAA+GGG + chr2_1:72870128-72870147 None:intergenic 30.0%
AATTCCAACAACAAAAACCA+AGG + chr2_1:72870129-72870148 None:intergenic 30.0%
TGTGTGTATACTCTTAATAC+AGG - chr2_1:72870216-72870235 Msa0223330:intron 30.0%
CTCAAATAAAAGTTCTGCAA+AGG - chr2_1:72870260-72870279 Msa0223330:intron 30.0%
AAACAGGAAAATAACTTCGA+AGG - chr2_1:72870306-72870325 Msa0223330:intron 30.0%
CATACATAAAACAAATGCGT+AGG - chr2_1:72870369-72870388 Msa0223330:intron 30.0%
CAAACGATGGAAATTGATAA+TGG - chr2_1:72870422-72870441 Msa0223330:intron 30.0%
CAATTACAATCTCCATATTG+TGG + chr2_1:72870580-72870599 None:intergenic 30.0%
ACCTATTGTAACTTACACAT+TGG - chr2_1:72870778-72870797 Msa0223330:intron 30.0%
ACCAATGTGTAAGTTACAAT+AGG + chr2_1:72870782-72870801 None:intergenic 30.0%
! TCAAAATCTTATTGGCTATC+TGG - chr2_1:72870931-72870950 Msa0223330:intron 30.0%
GTTAGTACAATACCATCTAT+TGG - chr2_1:72871029-72871048 Msa0223330:intron 30.0%
! TAATATTTGAAGATGGTGGT+CGG + chr2_1:72871060-72871079 None:intergenic 30.0%
ATATTAGAAAATGAGCTAGC+TGG - chr2_1:72871074-72871093 Msa0223330:intron 30.0%
! TGGTTTAAAATTGGAACTAC+AGG - chr2_1:72871094-72871113 Msa0223330:intron 30.0%
CATTAGACAAGGAACAAAAA+AGG + chr2_1:72871166-72871185 None:intergenic 30.0%
!!! CTTTTTTGTTCCTTGTCTAA+TGG - chr2_1:72871164-72871183 Msa0223330:CDS 30.0%
! GCCATATCATTTAAGATCAA+AGG + chr2_1:72871450-72871469 None:intergenic 30.0%
TAGGTATCAAGAAGATTTCA+TGG + chr2_1:72871657-72871676 None:intergenic 30.0%
GTGTTTATGAACTCAATATC+TGG - chr2_1:72871698-72871717 Msa0223330:CDS 30.0%
TACTGTTTCATTTAAATCGC+TGG - chr2_1:72871929-72871948 Msa0223330:CDS 30.0%
! TTTCATTTAAATCGCTGGTT+AGG - chr2_1:72871934-72871953 Msa0223330:CDS 30.0%
TCAAGTATTTAGTACTTCAG+AGG + chr2_1:72872159-72872178 None:intergenic 30.0%
GGGGGAAATTATTATTAAAG+TGG - chr2_1:72872252-72872271 Msa0223330:intron 30.0%
GACAGTTGTAAAATGATGAT+TGG + chr2_1:72872280-72872299 None:intergenic 30.0%
AAAAATACCGTGCAATAATC+AGG - chr2_1:72872561-72872580 Msa0223330:CDS 30.0%
AAATCATCCTGATTATTGCA+CGG + chr2_1:72872571-72872590 None:intergenic 30.0%
!!! ATCAGGATGATTTTTAGTGA+TGG - chr2_1:72872578-72872597 Msa0223330:intron 30.0%
! ACTTGTTTGAGACTTTAAGT+AGG - chr2_1:72872637-72872656 Msa0223330:intron 30.0%
TAAGTAGGTGGAAAATAACA+CGG - chr2_1:72872652-72872671 Msa0223330:intron 30.0%
! CTTGGAAGACTAATTTTTAC+TGG - chr2_1:72872697-72872716 Msa0223330:CDS 30.0%
!!! TAGTAGTCACCAAACTTTTT+TGG - chr2_1:72872765-72872784 Msa0223330:intron 30.0%
CAATCTAGTCCAAAAAAGTT+TGG + chr2_1:72872777-72872796 None:intergenic 30.0%
GATATATAAAACACATGGGA+CGG + chr2_1:72872834-72872853 None:intergenic 30.0%
TCTCTCAAATTCATATCAAG+AGG - chr2_1:72873251-72873270 Msa0223330:intron 30.0%
AATTCATATCAAGAGGCAAT+TGG - chr2_1:72873258-72873277 Msa0223330:intron 30.0%
!! ATTTGACTTGTCTTCCAAAT+TGG - chr2_1:72873393-72873412 Msa0223330:intron 30.0%
!! TTTGACTTGTCTTCCAAATT+GGG - chr2_1:72873394-72873413 Msa0223330:intron 30.0%
!! GGTTCCTATCATTTTTCTTT+TGG - chr2_1:72873454-72873473 Msa0223330:intron 30.0%
TGACTTAGAATTTAGTGATG+TGG - chr2_1:72873534-72873553 Msa0223330:intron 30.0%
TTTATCTGGGAATAGTTCAA+AGG - chr2_1:72873561-72873580 Msa0223330:intron 30.0%
CACTTGACAAATTAATACAC+TGG - chr2_1:72873679-72873698 Msa0223330:intron 30.0%
! GATTCTAGAAAAATTACGAG+TGG - chr2_1:72874048-72874067 Msa0223330:intron 30.0%
GAACAAATACATTATGAGTG+GGG + chr2_1:72874176-72874195 None:intergenic 30.0%
TAACAACTGACTACTAACAT+TGG + chr2_1:72874236-72874255 None:intergenic 30.0%
!!! TTGTTATTTTTGTTTGAGGG+AGG - chr2_1:72874250-72874269 Msa0223330:intron 30.0%
! AGTCCTAATTTGATGACAAA+TGG - chr2_1:72874859-72874878 Msa0223330:CDS 30.0%
!!! TATTGTGAAACCCTTTTTTC+TGG - chr2_1:72875100-72875119 Msa0223330:five_prime_UTR 30.0%
TACACATCTTCCAGAAAAAA+GGG + chr2_1:72875113-72875132 None:intergenic 30.0%
ATACACATCTTCCAGAAAAA+AGG + chr2_1:72875114-72875133 None:intergenic 30.0%
TGAAGATGAAAGGTGAGAAA+TGG + chr2_1:72868028-72868047 None:intergenic 35.0%
TTGAATGCGTTTATAGCTTG+AGG - chr2_1:72868081-72868100 Msa0223330:three_prime_UTR 35.0%
! TGATTTGGGAAACGAAAAAG+TGG + chr2_1:72868232-72868251 None:intergenic 35.0%
!!! TTGTCGTTTTCATTCAGAGA+CGG - chr2_1:72868259-72868278 Msa0223330:intron 35.0%
AAGATGTTGCGTTTAATGTG+TGG - chr2_1:72868373-72868392 Msa0223330:intron 35.0%
AATGTGTGGTAAGAATAGTC+GGG - chr2_1:72868387-72868406 Msa0223330:CDS 35.0%
TATCATAGGAAAAATGGTGG+AGG - chr2_1:72868449-72868468 Msa0223330:CDS 35.0%
TCTCCTTACTAGAGAATCTA+AGG + chr2_1:72868959-72868978 None:intergenic 35.0%
AGTAAGGAGAATAGATCAGA+TGG - chr2_1:72868969-72868988 Msa0223330:CDS 35.0%
CAAAGATGAGAATGTTGTGT+TGG - chr2_1:72869179-72869198 Msa0223330:intron 35.0%
!! CTAAACACAAGGGTTTGTTA+GGG + chr2_1:72869369-72869388 None:intergenic 35.0%
TTTAGATTGAGGGTTTAGGA+GGG + chr2_1:72869579-72869598 None:intergenic 35.0%
TGTGTTTAGATTGAGGGTTT+AGG + chr2_1:72869583-72869602 None:intergenic 35.0%
! TAAGGGTGTGTTTAGATTGA+GGG + chr2_1:72869589-72869608 None:intergenic 35.0%
ATTTCCAATCTCACATTCCA+GGG + chr2_1:72869792-72869811 None:intergenic 35.0%
TCATGTGTAAATGACATTCC+CGG + chr2_1:72869882-72869901 None:intergenic 35.0%
TTATTCCCAGGTTTAAAGGA+TGG - chr2_1:72869914-72869933 Msa0223330:CDS 35.0%
TATTCCCAGGTTTAAAGGAT+GGG - chr2_1:72869915-72869934 Msa0223330:CDS 35.0%
AATTCCCATCCTTTAAACCT+GGG + chr2_1:72869922-72869941 None:intergenic 35.0%
AAATTCCCATCCTTTAAACC+TGG + chr2_1:72869923-72869942 None:intergenic 35.0%
!!! GCAACTTTAGTTTTATTCCC+AGG + chr2_1:72869952-72869971 None:intergenic 35.0%
! TTTTTACCAAACACATGGGT+AGG - chr2_1:72870057-72870076 Msa0223330:intron 35.0%
AGGCAAAAACTTACATTCCA+AGG + chr2_1:72870092-72870111 None:intergenic 35.0%
! ATGAGTTGGATGAAGAAAAC+AGG - chr2_1:72870290-72870309 Msa0223330:intron 35.0%
GAAAATAACTTCGAAGGTGA+AGG - chr2_1:72870312-72870331 Msa0223330:intron 35.0%
AATGAACTGGTAAGCAGAAA+GGG - chr2_1:72870464-72870483 Msa0223330:intron 35.0%
TTGTGGAGTGAGAAGTAATT+AGG + chr2_1:72870563-72870582 None:intergenic 35.0%
TTACTTCTCACTCCACAATA+TGG - chr2_1:72870565-72870584 Msa0223330:intron 35.0%
AAAATACGGTACCATCTCTT+AGG - chr2_1:72870651-72870670 Msa0223330:intron 35.0%
ATCCTTAAGACGTTTCTTCA+GGG + chr2_1:72870834-72870853 None:intergenic 35.0%
! AATATTTGAAGATGGTGGTC+GGG + chr2_1:72871059-72871078 None:intergenic 35.0%
! TGAGCTAGCTGGTTTAAAAT+TGG - chr2_1:72871085-72871104 Msa0223330:intron 35.0%
ATTAAACTCCATGTCAAGAG+AGG - chr2_1:72871301-72871320 Msa0223330:intron 35.0%
GCAATCAGTTATGTAAGTTG+TGG - chr2_1:72871400-72871419 Msa0223330:intron 35.0%
! ATGTAAGTTGTGGCTCTTTT+TGG - chr2_1:72871410-72871429 Msa0223330:intron 35.0%
!!! ATTTTTTAAGGAGAACACGG+TGG + chr2_1:72871547-72871566 None:intergenic 35.0%
ATGCCTTATACTTACTAGCT+AGG - chr2_1:72871569-72871588 Msa0223330:intron 35.0%
ACTCCTAGCTAGTAAGTATA+AGG + chr2_1:72871575-72871594 None:intergenic 35.0%
TTATACTTACTAGCTAGGAG+TGG - chr2_1:72871574-72871593 Msa0223330:intron 35.0%
TAGTTGAAATCACCAGTTAC+CGG + chr2_1:72871603-72871622 None:intergenic 35.0%
AAGGCAAATGCAATGAGAAA+TGG + chr2_1:72871726-72871745 None:intergenic 35.0%
ATTTGCCTTGTAATTCCTTC+TGG - chr2_1:72871737-72871756 Msa0223330:CDS 35.0%
TACAACCAGAAGGAATTACA+AGG + chr2_1:72871745-72871764 None:intergenic 35.0%
! GTAATTCCTTCTGGTTGTAT+TGG - chr2_1:72871746-72871765 Msa0223330:CDS 35.0%
! TGTATTGGTGCACTATAACA+TGG - chr2_1:72871761-72871780 Msa0223330:CDS 35.0%
TATAACATGGAATTGACCCT+GGG - chr2_1:72871774-72871793 Msa0223330:CDS 35.0%
AACTCAGAAGACATTCACTA+TGG - chr2_1:72871827-72871846 Msa0223330:intron 35.0%
AATCTTCACATTCAAGAGTG+AGG + chr2_1:72871985-72872004 None:intergenic 35.0%
GATTAAGAAAAATCCCCATG+CGG + chr2_1:72872034-72872053 None:intergenic 35.0%
! TCATTTTACAACTGTCTCCT+AGG - chr2_1:72872284-72872303 Msa0223330:intron 35.0%
ATTATTGAAAGCTGTCCAAG+AGG + chr2_1:72872375-72872394 None:intergenic 35.0%
TTTACTGCCATCTAGTCATA+AGG - chr2_1:72872609-72872628 Msa0223330:intron 35.0%
GTTGTAACCTTATGACTAGA+TGG + chr2_1:72872619-72872638 None:intergenic 35.0%
! TGTTTGAGACTTTAAGTAGG+TGG - chr2_1:72872640-72872659 Msa0223330:intron 35.0%
! ACTAATTTTTACTGGTCGTC+TGG - chr2_1:72872705-72872724 Msa0223330:CDS 35.0%
! GTCTTCTTGTTATCCATCAT+TGG - chr2_1:72872901-72872920 Msa0223330:intron 35.0%
!! GTTATCCATCATTGGTGTTT+TGG - chr2_1:72872909-72872928 Msa0223330:intron 35.0%
ATTAGACAGGAAATGGTGTT+GGG + chr2_1:72872964-72872983 None:intergenic 35.0%
TATTAGACAGGAAATGGTGT+TGG + chr2_1:72872965-72872984 None:intergenic 35.0%
CTTCCTGAAATTCAGGAAAA+GGG + chr2_1:72873007-72873026 None:intergenic 35.0%
TCTTCCTGAAATTCAGGAAA+AGG + chr2_1:72873008-72873027 None:intergenic 35.0%
TGATAAGCAGTTGCATGATA+TGG - chr2_1:72873040-72873059 Msa0223330:intron 35.0%
CAGTAGACAGAAACTTCTAA+TGG - chr2_1:72873088-72873107 Msa0223330:intron 35.0%
TAGACAGAAACTTCTAATGG+AGG - chr2_1:72873091-72873110 Msa0223330:intron 35.0%
GTATATTCCATCTGATAGAG+TGG - chr2_1:72873155-72873174 Msa0223330:intron 35.0%
ACCAGGTAACAATCAATATC+TGG - chr2_1:72873301-72873320 Msa0223330:intron 35.0%
! TCCAGATATTGATTGTTACC+TGG + chr2_1:72873305-72873324 None:intergenic 35.0%
TAGGGAAGAATATCCCAATT+TGG + chr2_1:72873410-72873429 None:intergenic 35.0%
GACCCCAAAAGAAAAATGAT+AGG + chr2_1:72873461-72873480 None:intergenic 35.0%
AGTGATGTGGTAGATTTATC+TGG - chr2_1:72873547-72873566 Msa0223330:intron 35.0%
GTGATGTGGTAGATTTATCT+GGG - chr2_1:72873548-72873567 Msa0223330:intron 35.0%
CAAACAAGGATATTCATCTC+TGG + chr2_1:72873642-72873661 None:intergenic 35.0%
! CTTTCTATTACTGTGTTGAC+CGG - chr2_1:72873976-72873995 Msa0223330:intron 35.0%
AGAAAAATTACGAGTGGAAC+AGG - chr2_1:72874054-72874073 Msa0223330:intron 35.0%
! ACATATGGATTGAAGAGCTA+AGG + chr2_1:72874293-72874312 None:intergenic 35.0%
AATTGACAACAGGAGTCATA+AGG + chr2_1:72874330-72874349 None:intergenic 35.0%
GGATAACATGAATTGACAAC+AGG + chr2_1:72874340-72874359 None:intergenic 35.0%
AATTCATGTTATCCCCTTGT+TGG - chr2_1:72874346-72874365 Msa0223330:intron 35.0%
ATTCATGTTATCCCCTTGTT+GGG - chr2_1:72874347-72874366 Msa0223330:intron 35.0%
AATTGAACGGGAGTAGAATA+AGG + chr2_1:72874489-72874508 None:intergenic 35.0%
CAAGTCAAACAAGCATATGA+TGG - chr2_1:72874593-72874612 Msa0223330:intron 35.0%
GGCATATAACTGCAAAATTG+TGG + chr2_1:72874728-72874747 None:intergenic 35.0%
AATGAAGCAAGACAGTTCAT+TGG - chr2_1:72874781-72874800 Msa0223330:intron 35.0%
! GTTCATTGGTTGTACGATAA+TGG - chr2_1:72874795-72874814 Msa0223330:intron 35.0%
AAAGAACAGGCACTAACAAA+TGG - chr2_1:72875027-72875046 Msa0223330:CDS 35.0%
AAGAACAGGCACTAACAAAT+GGG - chr2_1:72875028-72875047 Msa0223330:CDS 35.0%
AAGATGTGTATCCTCGTTAT+AGG - chr2_1:72875123-72875142 Msa0223330:five_prime_UTR 35.0%
AGATGTGTATCCTCGTTATA+GGG - chr2_1:72875124-72875143 Msa0223330:five_prime_UTR 35.0%
CATGCAACTAACTTTGCTTC+AGG - chr2_1:72867818-72867837 Msa0223330:three_prime_UTR 40.0%
TCATCGGTAGAAAAACCCAA+AGG - chr2_1:72867886-72867905 Msa0223330:three_prime_UTR 40.0%
CATCGGTAGAAAAACCCAAA+GGG - chr2_1:72867887-72867906 Msa0223330:three_prime_UTR 40.0%
ATCGGTAGAAAAACCCAAAG+GGG - chr2_1:72867888-72867907 Msa0223330:three_prime_UTR 40.0%
TGGAAGAGAGATGAAGAAAG+AGG + chr2_1:72868008-72868027 None:intergenic 40.0%
! AATTCGTCAAAAGAGAGCAC+AGG - chr2_1:72868105-72868124 Msa0223330:three_prime_UTR 40.0%
! AAAGAGAGCACAGGATAGAT+TGG - chr2_1:72868114-72868133 Msa0223330:three_prime_UTR 40.0%
! AGATTGGTTAAAGCCTCTTC+TGG - chr2_1:72868130-72868149 Msa0223330:three_prime_UTR 40.0%
!!! AACTCGACTTAGCTGGTTTT+GGG + chr2_1:72868499-72868518 None:intergenic 40.0%
!! AAACTCGACTTAGCTGGTTT+TGG + chr2_1:72868500-72868519 None:intergenic 40.0%
!! TTTCCATGGAGCATTTTGGA+GGG - chr2_1:72868517-72868536 Msa0223330:intron 40.0%
!!! TTTTTTCGGATGGGTGACTA+TGG + chr2_1:72868677-72868696 None:intergenic 40.0%
!!! TTGTTTGGGAGGGGTTTTTT+CGG + chr2_1:72868691-72868710 None:intergenic 40.0%
TCAATCCAAACACTCCCTAA+GGG + chr2_1:72868715-72868734 None:intergenic 40.0%
!! TTAGGGAGTGTTTGGATTGA+GGG - chr2_1:72868715-72868734 Msa0223330:intron 40.0%
AGTGTTTGGATTGAGGGTTT+AGG - chr2_1:72868721-72868740 Msa0223330:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG - chr2_1:72868725-72868744 Msa0223330:intron 40.0%
AATCTAAGGACGTGTTTGGA+TGG + chr2_1:72868945-72868964 None:intergenic 40.0%
AGAGAATCTAAGGACGTGTT+TGG + chr2_1:72868949-72868968 None:intergenic 40.0%
CGTCCTTAGATTCTCTAGTA+AGG - chr2_1:72868953-72868972 Msa0223330:CDS 40.0%
TGATAGAACAAGCCTGAGAA+CGG - chr2_1:72869088-72869107 Msa0223330:intron 40.0%
GAGAATCTATTTCCGTTCTC+AGG + chr2_1:72869103-72869122 None:intergenic 40.0%
GAGAGTAGAAATTACCTGAG+AGG + chr2_1:72869125-72869144 None:intergenic 40.0%
TGAGAATGTTGTGTTGGATG+TGG - chr2_1:72869185-72869204 Msa0223330:intron 40.0%
GAGAATGTTGTGTTGGATGT+GGG - chr2_1:72869186-72869205 Msa0223330:intron 40.0%
AGAATGTTGTGTTGGATGTG+GGG - chr2_1:72869187-72869206 Msa0223330:intron 40.0%
! CCTAAACACAAGGGTTTGTT+AGG + chr2_1:72869370-72869389 None:intergenic 40.0%
CCTAACAAACCCTTGTGTTT+AGG - chr2_1:72869367-72869386 Msa0223330:intron 40.0%
AACAAACCCTTGTGTTTAGG+AGG - chr2_1:72869370-72869389 Msa0223330:intron 40.0%
ACAAACCCTTGTGTTTAGGA+GGG - chr2_1:72869371-72869390 Msa0223330:intron 40.0%
TTAGATTGAGGGTTTAGGAG+GGG + chr2_1:72869578-72869597 None:intergenic 40.0%
GTTTAGATTGAGGGTTTAGG+AGG + chr2_1:72869580-72869599 None:intergenic 40.0%
! CTAAGGGTGTGTTTAGATTG+AGG + chr2_1:72869590-72869609 None:intergenic 40.0%
CTCCTTACTGGAGAATCTAA+GGG + chr2_1:72869606-72869625 None:intergenic 40.0%
TCTCCTTACTGGAGAATCTA+AGG + chr2_1:72869607-72869626 None:intergenic 40.0%
! AAGTTTTACCCCACTAAGTG+GGG + chr2_1:72869735-72869754 None:intergenic 40.0%
! CAAGTTTTACCCCACTAAGT+GGG + chr2_1:72869736-72869755 None:intergenic 40.0%
CACTTAGTGGGGTAAAACTT+GGG - chr2_1:72869735-72869754 Msa0223330:CDS 40.0%
ACTTAGTGGGGTAAAACTTG+GGG - chr2_1:72869736-72869755 Msa0223330:CDS 40.0%
AATTCCCTGGAATGTGAGAT+TGG - chr2_1:72869785-72869804 Msa0223330:CDS 40.0%
CATTTCCAATCTCACATTCC+AGG + chr2_1:72869793-72869812 None:intergenic 40.0%
TCCCAGGAATGTTATATTCC+CGG - chr2_1:72869860-72869879 Msa0223330:intron 40.0%
CATGTGTAAATGACATTCCC+GGG + chr2_1:72869881-72869900 None:intergenic 40.0%
GATGGGAATTTGACATTCCT+GGG - chr2_1:72869932-72869951 Msa0223330:CDS 40.0%
AACATTCCTACCCATGTGTT+TGG + chr2_1:72870066-72870085 None:intergenic 40.0%
TGGGTAGGAATGTTATTCCT+TGG - chr2_1:72870072-72870091 Msa0223330:intron 40.0%
!! ACACCCTTGGTTTTTGTTGT+TGG - chr2_1:72870122-72870141 Msa0223330:intron 40.0%
GCAAAGGAAGAACAATGAGT+TGG - chr2_1:72870276-72870295 Msa0223330:intron 40.0%
ATTGTTGCAGCTTCAAACGA+TGG - chr2_1:72870409-72870428 Msa0223330:intron 40.0%
GAATGAACTGGTAAGCAGAA+AGG - chr2_1:72870463-72870482 Msa0223330:intron 40.0%
! AAAGGGTTGACAGCGAATTT+TGG - chr2_1:72870481-72870500 Msa0223330:intron 40.0%
ATTCCTGCAGGAGCAAAATA+CGG - chr2_1:72870637-72870656 Msa0223330:intron 40.0%
ATCTCTTAGGAAAGCTCTCA+GGG - chr2_1:72870664-72870683 Msa0223330:intron 40.0%
TGTAACTTACACATTGGTGC+AGG - chr2_1:72870784-72870803 Msa0223330:intron 40.0%
TACCCTGAAGAAACGTCTTA+AGG - chr2_1:72870829-72870848 Msa0223330:intron 40.0%
CATCCTTAAGACGTTTCTTC+AGG + chr2_1:72870835-72870854 None:intergenic 40.0%
AAGAGGAGCAATATCGTGTA+TGG - chr2_1:72870858-72870877 Msa0223330:intron 40.0%
AGAGGAGCAATATCGTGTAT+GGG - chr2_1:72870859-72870878 Msa0223330:intron 40.0%
!! CTTATTGGCTATCTGGTTCT+AGG - chr2_1:72870938-72870957 Msa0223330:intron 40.0%
GATGTCTGAAAAGCAAGAGT+TGG - chr2_1:72871271-72871290 Msa0223330:intron 40.0%
GTTCTGCTCATAAATCCTTG+TGG - chr2_1:72871330-72871349 Msa0223330:intron 40.0%
AGTTGAAATCACCAGTTACC+GGG + chr2_1:72871602-72871621 None:intergenic 40.0%
TTGCTAGAGAAAAGGACTCT+AGG + chr2_1:72871676-72871695 None:intergenic 40.0%
! TAGAGTCCTTTTCTCTAGCA+AGG - chr2_1:72871675-72871694 Msa0223330:intron 40.0%
! AGAGTCCTTTTCTCTAGCAA+GGG - chr2_1:72871676-72871695 Msa0223330:intron 40.0%
AAACACCCTTGCTAGAGAAA+AGG + chr2_1:72871684-72871703 None:intergenic 40.0%
CTATAACATGGAATTGACCC+TGG - chr2_1:72871773-72871792 Msa0223330:CDS 40.0%
TTCTGCATGAACAAAACCCA+GGG + chr2_1:72871793-72871812 None:intergenic 40.0%
TTTGTTCATGCAGAAGTCTC+AGG - chr2_1:72871798-72871817 Msa0223330:intron 40.0%
AGAAGACATTCACTATGGTG+AGG - chr2_1:72871832-72871851 Msa0223330:intron 40.0%
GCTTGACTTTGTAACCTCAA+CGG + chr2_1:72872325-72872344 None:intergenic 40.0%
GTGTGAGTTTAGTAGCTTAG+TGG + chr2_1:72872353-72872372 None:intergenic 40.0%
TAGGTGGAAAATAACACGGA+GGG - chr2_1:72872656-72872675 Msa0223330:intron 40.0%
GAGTCAAAATGAAGTCAGCT+TGG - chr2_1:72872679-72872698 Msa0223330:intron 40.0%
AGTTGCCAAAACACCAATGA+TGG + chr2_1:72872917-72872936 None:intergenic 40.0%
!!! ATCATTGGTGTTTTGGCAAC+TGG - chr2_1:72872916-72872935 Msa0223330:intron 40.0%
! TTAGACAGGAAATGGTGTTG+GGG + chr2_1:72872963-72872982 None:intergenic 40.0%
! TCACCCTTTTCCTGAATTTC+AGG - chr2_1:72873001-72873020 Msa0223330:intron 40.0%
TGCTTGTCTTCCTGAAATTC+AGG + chr2_1:72873014-72873033 None:intergenic 40.0%
ATTCCATCTGATAGAGTGGT+TGG - chr2_1:72873159-72873178 Msa0223330:intron 40.0%
AAACCAACCACTCTATCAGA+TGG + chr2_1:72873165-72873184 None:intergenic 40.0%
!! TGGTTGGTTTGTCATCTTGT+TGG - chr2_1:72873175-72873194 Msa0223330:intron 40.0%
GAAAACCACCTCTCAGAATA+AGG + chr2_1:72873791-72873810 None:intergenic 40.0%
TCTTGGCCAAAATAGAATGC+AGG + chr2_1:72873833-72873852 None:intergenic 40.0%
!!! CATTCTATTTTGGCCAAGAC+TGG - chr2_1:72873834-72873853 Msa0223330:intron 40.0%
CTGTGCTGAGATCTTTGTTA+GGG - chr2_1:72873904-72873923 Msa0223330:intron 40.0%
! AATGGATTCTGGTAAGCCAT+TGG + chr2_1:72874080-72874099 None:intergenic 40.0%
ACCAGAATCCATTAAGAACG+AGG - chr2_1:72874087-72874106 Msa0223330:intron 40.0%
!! ACCTCGTTCTTAATGGATTC+TGG + chr2_1:72874091-72874110 None:intergenic 40.0%
! TATGGATTGAAGAGCTAAGG+AGG + chr2_1:72874290-72874309 None:intergenic 40.0%
CAAGGAACTGTGTTTCATTG+AGG - chr2_1:72874432-72874451 Msa0223330:intron 40.0%
AACGGGAGTAGAATAAGGAA+CGG + chr2_1:72874484-72874503 None:intergenic 40.0%
AGAACAGGCACTAACAAATG+GGG - chr2_1:72875029-72875048 Msa0223330:CDS 40.0%
TTGTTATGCACCCTATAACG+AGG + chr2_1:72875137-72875156 None:intergenic 40.0%
TTCGCAGCGATAATACTGAC+CGG + chr2_1:72868185-72868204 None:intergenic 45.0%
GTGGTAAGAATAGTCGGGAT+AGG - chr2_1:72868392-72868411 Msa0223330:CDS 45.0%
GTCGTGGCAGTACTTATCAT+AGG - chr2_1:72868435-72868454 Msa0223330:CDS 45.0%
!!! ACTCGACTTAGCTGGTTTTG+GGG + chr2_1:72868498-72868517 None:intergenic 45.0%
!! CGAGTTTCCATGGAGCATTT+TGG - chr2_1:72868513-72868532 Msa0223330:intron 45.0%
!! GTTTCCATGGAGCATTTTGG+AGG - chr2_1:72868516-72868535 Msa0223330:intron 45.0%
!! TTCCATGGAGCATTTTGGAG+GGG - chr2_1:72868518-72868537 Msa0223330:intron 45.0%
! CACTCCCTAAGGGTTTGTTT+GGG + chr2_1:72868705-72868724 None:intergenic 45.0%
! ACACTCCCTAAGGGTTTGTT+TGG + chr2_1:72868706-72868725 None:intergenic 45.0%
!! ACAAACCCTTAGGGAGTGTT+TGG - chr2_1:72868707-72868726 Msa0223330:intron 45.0%
CTCAATCCAAACACTCCCTA+AGG + chr2_1:72868716-72868735 None:intergenic 45.0%
!! CTTAGGGAGTGTTTGGATTG+AGG - chr2_1:72868714-72868733 Msa0223330:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG - chr2_1:72868724-72868743 Msa0223330:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - chr2_1:72868726-72868745 Msa0223330:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + chr2_1:72868931-72868950 None:intergenic 45.0%
TAAGGACGTGTTTGGATGGA+GGG + chr2_1:72868941-72868960 None:intergenic 45.0%
CGGAAATAGATTCTCCTCTC+AGG - chr2_1:72869108-72869127 Msa0223330:intron 45.0%
! TGTTAGGGAGCATATGGCTA+TGG + chr2_1:72869354-72869373 None:intergenic 45.0%
!! AGGGTTTGTTAGGGAGCATA+TGG + chr2_1:72869360-72869379 None:intergenic 45.0%
CAAACCCTTGTGTTTAGGAG+GGG - chr2_1:72869372-72869391 Msa0223330:intron 45.0%
CACCCTTAGATTCTCCAGTA+AGG - chr2_1:72869601-72869620 Msa0223330:intron 45.0%
ATTAAGTCTTCCTCTGCGTC+AGG + chr2_1:72869657-72869676 None:intergenic 45.0%
CAGAGGAAGACTTAATGAGC+TGG - chr2_1:72869661-72869680 Msa0223330:intron 45.0%
! CCAAGTTTTACCCCACTAAG+TGG + chr2_1:72869737-72869756 None:intergenic 45.0%
CCACTTAGTGGGGTAAAACT+TGG - chr2_1:72869734-72869753 Msa0223330:CDS 45.0%
CTTGGGGTGTGTTTGTTTCA+AGG - chr2_1:72869752-72869771 Msa0223330:CDS 45.0%
CCCGGGAATATAACATTCCT+GGG + chr2_1:72869864-72869883 None:intergenic 45.0%
CCCAGGAATGTTATATTCCC+GGG - chr2_1:72869861-72869880 Msa0223330:intron 45.0%
TCCCGGGAATATAACATTCC+TGG + chr2_1:72869865-72869884 None:intergenic 45.0%
GGATGGGAATTTGACATTCC+TGG - chr2_1:72869931-72869950 Msa0223330:CDS 45.0%
! CCAAGGGTGTGTTTGTTTCA+AGG + chr2_1:72870112-72870131 None:intergenic 45.0%
CCTTGAAACAAACACACCCT+TGG - chr2_1:72870109-72870128 Msa0223330:intron 45.0%
GCACAAGCAGTTGAATGAAC+TGG - chr2_1:72870451-72870470 Msa0223330:intron 45.0%
AAGCCCAATTTGATTCCTGC+AGG - chr2_1:72870625-72870644 Msa0223330:intron 45.0%
GCTCCTGCAGGAATCAAATT+GGG + chr2_1:72870631-72870650 None:intergenic 45.0%
TGCTCCTGCAGGAATCAAAT+TGG + chr2_1:72870632-72870651 None:intergenic 45.0%
CTGAGAGCTTTCCTAAGAGA+TGG + chr2_1:72870665-72870684 None:intergenic 45.0%
CATCTCTTAGGAAAGCTCTC+AGG - chr2_1:72870663-72870682 Msa0223330:intron 45.0%
AACTTACACATTGGTGCAGG+AGG - chr2_1:72870787-72870806 Msa0223330:intron 45.0%
ACGTCTTAAGGATGCTGAAG+AGG - chr2_1:72870841-72870860 Msa0223330:intron 45.0%
!! ATTGGCTATCTGGTTCTAGG+CGG - chr2_1:72870941-72870960 Msa0223330:intron 45.0%
CAGACATCAGTGATGCAATG+CGG + chr2_1:72871259-72871278 None:intergenic 45.0%
GTTGAAATCACCAGTTACCG+GGG + chr2_1:72871601-72871620 None:intergenic 45.0%
AGTGCACCAATACAACCAGA+AGG + chr2_1:72871755-72871774 None:intergenic 45.0%
CTTCTGCATGAACAAAACCC+AGG + chr2_1:72871794-72871813 None:intergenic 45.0%
! CTCCTTTTAATGTGCCGCAT+GGG - chr2_1:72872017-72872036 Msa0223330:CDS 45.0%
! TCCTTTTAATGTGCCGCATG+GGG - chr2_1:72872018-72872037 Msa0223330:CDS 45.0%
! CTCCTTTTTAATGTGCCGCA+TGG - chr2_1:72872056-72872075 Msa0223330:intron 45.0%
AGCCATGCGGCACATTAAAA+AGG + chr2_1:72872061-72872080 None:intergenic 45.0%
ACGACGTAGAATAAGCCATG+CGG + chr2_1:72872074-72872093 None:intergenic 45.0%
GGACAGAGAACAAATCACCT+AGG + chr2_1:72872304-72872323 None:intergenic 45.0%
! GATTTGTTCTCTGTCCGTTG+AGG - chr2_1:72872308-72872327 Msa0223330:CDS 45.0%
GCTACTAAACTCACACCTCT+TGG - chr2_1:72872357-72872376 Msa0223330:intron 45.0%
GTAGGTGGAAAATAACACGG+AGG - chr2_1:72872655-72872674 Msa0223330:intron 45.0%
AGGTGGAAAATAACACGGAG+GGG - chr2_1:72872657-72872676 Msa0223330:intron 45.0%
! TTTTACTGGTCGTCTGGTTG+AGG - chr2_1:72872711-72872730 Msa0223330:CDS 45.0%
TTTACTGGTCGTCTGGTTGA+GGG - chr2_1:72872712-72872731 Msa0223330:CDS 45.0%
! TAGACAGGAAATGGTGTTGG+GGG + chr2_1:72872962-72872981 None:intergenic 45.0%
ATATGGCGTTAGCTGTAGAG+AGG - chr2_1:72873057-72873076 Msa0223330:intron 45.0%
AATTGGAGCAGCAGCAAGAT+GGG - chr2_1:72873275-72873294 Msa0223330:intron 45.0%
AGGTCTCATATATGCAGCCT+TGG - chr2_1:72873359-72873378 Msa0223330:intron 45.0%
!! ATGCAGAGCCTTATTCTGAG+AGG - chr2_1:72873780-72873799 Msa0223330:intron 45.0%
TCTAACAATCACGCCAGTCT+TGG + chr2_1:72873850-72873869 None:intergenic 45.0%
GCTGTGCTGAGATCTTTGTT+AGG - chr2_1:72873903-72873922 Msa0223330:intron 45.0%
AAGCAAAATGAAGAGCTGCG+TGG - chr2_1:72874025-72874044 Msa0223330:intron 45.0%
AGCAAAATGAAGAGCTGCGT+GGG - chr2_1:72874026-72874045 Msa0223330:intron 45.0%
CTCGTGTACCTCGTTCTTAA+TGG + chr2_1:72874098-72874117 None:intergenic 45.0%
CATTAAGAACGAGGTACACG+AGG - chr2_1:72874096-72874115 Msa0223330:intron 45.0%
! GTGGTTTGGGGAGAAACATA+TGG + chr2_1:72874308-72874327 None:intergenic 45.0%
AGGAGTCATAAGGTGGTTTG+GGG + chr2_1:72874320-72874339 None:intergenic 45.0%
CAGGAGTCATAAGGTGGTTT+GGG + chr2_1:72874321-72874340 None:intergenic 45.0%
ACAGGAGTCATAAGGTGGTT+TGG + chr2_1:72874322-72874341 None:intergenic 45.0%
TGACAACAGGAGTCATAAGG+TGG + chr2_1:72874327-72874346 None:intergenic 45.0%
TCTACTCCCGTTCAATTGCT+TGG - chr2_1:72874492-72874511 Msa0223330:intron 45.0%
TGCTCAGTTCCTTCACAAGT+TGG + chr2_1:72874523-72874542 None:intergenic 45.0%
GTTTCAGTAACTGGCTGTGA+CGG - chr2_1:72874931-72874950 Msa0223330:intron 45.0%
TTTCAGTAACTGGCTGTGAC+GGG - chr2_1:72874932-72874951 Msa0223330:intron 45.0%
!! TCAAATATAAAAATAATAAA+AGG + chr2_1:72872132-72872151 None:intergenic 5.0%
GGTAGAAAAACCCAAAGGGG+CGG - chr2_1:72867891-72867910 Msa0223330:three_prime_UTR 50.0%
TGCATCTCTAGGTCGACGAA+CGG - chr2_1:72867976-72867995 Msa0223330:three_prime_UTR 50.0%
GCTTAGATCTGGTCCAGAAG+AGG + chr2_1:72868146-72868165 None:intergenic 50.0%
TTCTGGACCAGATCTAAGCC+AGG - chr2_1:72868147-72868166 Msa0223330:three_prime_UTR 50.0%
TAATACTGACCGGGGATGGT+CGG + chr2_1:72868175-72868194 None:intergenic 50.0%
TCGCAGCGATAATACTGACC+GGG + chr2_1:72868184-72868203 None:intergenic 50.0%
! CGTTTTCATTCAGAGACGGC+TGG - chr2_1:72868263-72868282 Msa0223330:intron 50.0%
GGAGAGTCTATTTCCGCTCT+CGG + chr2_1:72868300-72868319 None:intergenic 50.0%
CGGAAATAGACTCTCCTCTC+AGG - chr2_1:72868304-72868323 Msa0223330:intron 50.0%
GAAACGACAGAGTTGAGTCG+TGG - chr2_1:72868419-72868438 Msa0223330:CDS 50.0%
!!! TCGACTTAGCTGGTTTTGGG+GGG + chr2_1:72868496-72868515 None:intergenic 50.0%
!!! CTCGACTTAGCTGGTTTTGG+GGG + chr2_1:72868497-72868516 None:intergenic 50.0%
CCATGGAAACTCGACTTAGC+TGG + chr2_1:72868506-72868525 None:intergenic 50.0%
CCAGCTAAGTCGAGTTTCCA+TGG - chr2_1:72868503-72868522 Msa0223330:intron 50.0%
!! ATGGAGCATTTTGGAGGGGA+GGG - chr2_1:72868522-72868541 Msa0223330:intron 50.0%
!!! TGGGAGGGGTTTTTTCGGAT+GGG + chr2_1:72868686-72868705 None:intergenic 50.0%
!!! TTGGGAGGGGTTTTTTCGGA+TGG + chr2_1:72868687-72868706 None:intergenic 50.0%
! CCTAAGGGTTTGTTTGGGAG+GGG + chr2_1:72868700-72868719 None:intergenic 50.0%
! CCCTAAGGGTTTGTTTGGGA+GGG + chr2_1:72868701-72868720 None:intergenic 50.0%
CCCTCCCAAACAAACCCTTA+GGG - chr2_1:72868698-72868717 Msa0223330:intron 50.0%
! TCCCTAAGGGTTTGTTTGGG+AGG + chr2_1:72868702-72868721 None:intergenic 50.0%
TTGAGGGTTTAGGAGGGGAA+AGG - chr2_1:72868731-72868750 Msa0223330:intron 50.0%
TGAGGGTTTAGGAGGGGAAA+GGG - chr2_1:72868732-72868751 Msa0223330:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG + chr2_1:72868930-72868949 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + chr2_1:72868932-72868951 None:intergenic 50.0%
CGTGTTTGGATGGAGGGTTT+AGG + chr2_1:72868935-72868954 None:intergenic 50.0%
CTAAGGACGTGTTTGGATGG+AGG + chr2_1:72868942-72868961 None:intergenic 50.0%
GGATGTGGGGTAAGACTAGT+CGG - chr2_1:72869200-72869219 Msa0223330:intron 50.0%
! GATGTGGGGTAAGACTAGTC+GGG - chr2_1:72869201-72869220 Msa0223330:intron 50.0%
! GGGTAAGACTAGTCGGGATA+GGG - chr2_1:72869207-72869226 Msa0223330:intron 50.0%
CCTTCCCCTCCTAAACACAA+GGG + chr2_1:72869379-72869398 None:intergenic 50.0%
CCTTGTGTTTAGGAGGGGAA+GGG - chr2_1:72869377-72869396 Msa0223330:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG + chr2_1:72868731-72868750 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + chr2_1:72868730-72868749 None:intergenic 50.0%
AGTCAAATCACCTGACGCAG+AGG - chr2_1:72869644-72869663 Msa0223330:intron 50.0%
TTTACCCCACTAAGTGGGGT+CGG + chr2_1:72869731-72869750 None:intergenic 50.0%
! GTACCGTATTTTGCTCCTGC+AGG + chr2_1:72870643-72870662 None:intergenic 50.0%
AGCTCTCAGGGATGTTGCAA+TGG - chr2_1:72870676-72870695 Msa0223330:intron 50.0%
! ATTTGAAGATGGTGGTCGGG+TGG + chr2_1:72871056-72871075 None:intergenic 50.0%
TACAGCGTGAGTCACTGATG+AGG - chr2_1:72871198-72871217 Msa0223330:intron 50.0%
TAGCTAACTGTTCTTGCCCC+TGG + chr2_1:72871226-72871245 None:intergenic 50.0%
! GCTCCTTTTAATGTGCCGCA+TGG - chr2_1:72872016-72872035 Msa0223330:CDS 50.0%
TCCCCATGCGGCACATTAAA+AGG + chr2_1:72872022-72872041 None:intergenic 50.0%
TTACTGGTCGTCTGGTTGAG+GGG - chr2_1:72872713-72872732 Msa0223330:CDS 50.0%
CAATTGGAGCAGCAGCAAGA+TGG - chr2_1:72873274-72873293 Msa0223330:intron 50.0%
AGCAGCAAGATGGGAAAACC+AGG - chr2_1:72873284-72873303 Msa0223330:intron 50.0%
!! CAGAGCCTTATTCTGAGAGG+TGG - chr2_1:72873783-72873802 Msa0223330:intron 50.0%
TCCATCACCTGCAGAATCAC+CGG + chr2_1:72873998-72874017 None:intergenic 50.0%
TTACGAGTGGAACAGGCCAA+TGG - chr2_1:72874061-72874080 Msa0223330:intron 50.0%
AAGAACGAGGTACACGAGGT+TGG - chr2_1:72874100-72874119 Msa0223330:intron 50.0%
! GTTGGTTCCTCGACATCTAC+AGG - chr2_1:72874118-72874137 Msa0223330:intron 50.0%
TTCCTCGACATCTACAGGAG+AGG - chr2_1:72874123-72874142 Msa0223330:intron 50.0%
TGAAGAGCTAAGGAGGCCAT+GGG + chr2_1:72874283-72874302 None:intergenic 50.0%
TTGAAGAGCTAAGGAGGCCA+TGG + chr2_1:72874284-72874303 None:intergenic 50.0%
ATCCCCTTGTTGGGTCTTCT+TGG - chr2_1:72874356-72874375 Msa0223330:intron 50.0%
TCCCCTTGTTGGGTCTTCTT+GGG - chr2_1:72874357-72874376 Msa0223330:intron 50.0%
ACCCAAGAAGACCCAACAAG+GGG + chr2_1:72874361-72874380 None:intergenic 50.0%
GACCCAAGAAGACCCAACAA+GGG + chr2_1:72874362-72874381 None:intergenic 50.0%
TGACCCAAGAAGACCCAACA+AGG + chr2_1:72874363-72874382 None:intergenic 50.0%
TCCCGTTCAATTGCTTGGCA+GGG - chr2_1:72874497-72874516 Msa0223330:intron 50.0%
CTTTCAATGTTGCGCAGCAC+TGG + chr2_1:72874749-72874768 None:intergenic 50.0%
GTGCTGCGCAACATTGAAAG+TGG - chr2_1:72874749-72874768 Msa0223330:intron 50.0%
! GAGCAGGGTGTTTCAGTAAC+TGG - chr2_1:72874922-72874941 Msa0223330:intron 50.0%
TCCATTGTTACCCACGACGG+GGG + chr2_1:72867947-72867966 None:intergenic 55.0%
CTCCATTGTTACCCACGACG+GGG + chr2_1:72867948-72867967 None:intergenic 55.0%
CCTCCATTGTTACCCACGAC+GGG + chr2_1:72867949-72867968 None:intergenic 55.0%
GCCTCCATTGTTACCCACGA+CGG + chr2_1:72867950-72867969 None:intergenic 55.0%
GAGGCTCGTCATGCATCTCT+AGG - chr2_1:72867965-72867984 Msa0223330:three_prime_UTR 55.0%
GTCGGAACCTGGCTTAGATC+TGG + chr2_1:72868157-72868176 None:intergenic 55.0%
GCGATAATACTGACCGGGGA+TGG + chr2_1:72868179-72868198 None:intergenic 55.0%
CGCAGCGATAATACTGACCG+GGG + chr2_1:72868183-72868202 None:intergenic 55.0%
GGAATGAGCAAGTCCGAGAG+CGG - chr2_1:72868284-72868303 Msa0223330:intron 55.0%
GAGGGTAGACGTTACCTGAG+AGG + chr2_1:72868321-72868340 None:intergenic 55.0%
CTCCCCTCCAAAATGCTCCA+TGG + chr2_1:72868523-72868542 None:intergenic 55.0%
!! CATGGAGCATTTTGGAGGGG+AGG - chr2_1:72868521-72868540 Msa0223330:intron 55.0%
CCCCTCCCAAACAAACCCTT+AGG - chr2_1:72868697-72868716 Msa0223330:intron 55.0%
GAGGGTTTAGGAGGGGAAAG+GGG - chr2_1:72868733-72868752 Msa0223330:intron 55.0%
GTTTAGGAGGGGAAAGGGGA+GGG - chr2_1:72868737-72868756 Msa0223330:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG + chr2_1:72868925-72868944 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG + chr2_1:72868926-72868945 None:intergenic 55.0%
! GGGGTAAGACTAGTCGGGAT+AGG - chr2_1:72869206-72869225 Msa0223330:intron 55.0%
CCCTTGTGTTTAGGAGGGGA+AGG - chr2_1:72869376-72869395 Msa0223330:intron 55.0%
CCCTTCCCCTCCTAAACACA+AGG + chr2_1:72869380-72869399 None:intergenic 55.0%
TGTGTTTAGGAGGGGAAGGG+AGG - chr2_1:72869380-72869399 Msa0223330:intron 55.0%
GTGTTTAGGAGGGGAAGGGA+GGG - chr2_1:72869381-72869400 Msa0223330:intron 55.0%
TGTTTAGGAGGGGAAGGGAG+GGG - chr2_1:72869382-72869401 Msa0223330:intron 55.0%
ATGTTGCCGACCCCACTTAG+TGG - chr2_1:72869722-72869741 Msa0223330:CDS 55.0%
TGTTGCCGACCCCACTTAGT+GGG - chr2_1:72869723-72869742 Msa0223330:CDS 55.0%
TGGTCGGGTGGACCAATAGA+TGG + chr2_1:72871044-72871063 None:intergenic 55.0%
! TGAGTCACTGATGAGGCACC+AGG - chr2_1:72871205-72871224 Msa0223330:intron 55.0%
! GAGTCACTGATGAGGCACCA+GGG - chr2_1:72871206-72871225 Msa0223330:intron 55.0%
! AGTCACTGATGAGGCACCAG+GGG - chr2_1:72871207-72871226 Msa0223330:intron 55.0%
TCCATGTCAAGAGAGGCTGC+AGG - chr2_1:72871308-72871327 Msa0223330:intron 55.0%
ACCTGCAGCCTCTCTTGACA+TGG + chr2_1:72871312-72871331 None:intergenic 55.0%
TACTAGCTAGGAGTGGTCCC+CGG - chr2_1:72871581-72871600 Msa0223330:intron 55.0%
TACTGGTCGTCTGGTTGAGG+GGG - chr2_1:72872714-72872733 Msa0223330:CDS 55.0%
! ATGGTGTTGGGGGTAACGAC+AGG + chr2_1:72872952-72872971 None:intergenic 55.0%
GGCGTTAGCTGTAGAGAGGT+TGG - chr2_1:72873061-72873080 Msa0223330:intron 55.0%
! GTGTTGACCGGTGATTCTGC+AGG - chr2_1:72873988-72874007 Msa0223330:intron 55.0%
ACCGGTGATTCTGCAGGTGA+TGG - chr2_1:72873994-72874013 Msa0223330:intron 55.0%
CACCTCTCCTGTAGATGTCG+AGG + chr2_1:72874128-72874147 None:intergenic 55.0%
CTCGACATCTACAGGAGAGG+TGG - chr2_1:72874126-72874145 Msa0223330:intron 55.0%
AGGAGAGGTGGCATCTCTGA+AGG - chr2_1:72874138-72874157 Msa0223330:intron 55.0%
!! TGAGGGAGGTGTTGAACCCA+TGG - chr2_1:72874264-72874283 Msa0223330:intron 55.0%
CTCCCGTTCAATTGCTTGGC+AGG - chr2_1:72874496-72874515 Msa0223330:intron 55.0%
GCCCTGCCAAGCAATTGAAC+GGG + chr2_1:72874501-72874520 None:intergenic 55.0%
GGCCCTGCCAAGCAATTGAA+CGG + chr2_1:72874502-72874521 None:intergenic 55.0%
TTGGCAGGGCCAACTTGTGA+AGG - chr2_1:72874511-72874530 Msa0223330:intron 55.0%
GAAGGAACTGAGCAGAGCAG+AGG - chr2_1:72874529-72874548 Msa0223330:intron 55.0%
AAAACCCAAAGGGGCGGCGA+AGG - chr2_1:72867897-72867916 Msa0223330:three_prime_UTR 60.0%
AAACCCAAAGGGGCGGCGAA+GGG - chr2_1:72867898-72867917 Msa0223330:three_prime_UTR 60.0%
ATTCCCTTCGCCGCCCCTTT+GGG + chr2_1:72867904-72867923 None:intergenic 60.0%
AATTCCCTTCGCCGCCCCTT+TGG + chr2_1:72867905-72867924 None:intergenic 60.0%
ATTGTTACCCACGACGGGGG+CGG + chr2_1:72867944-72867963 None:intergenic 60.0%
CCCGTCGTGGGTAACAATGG+AGG - chr2_1:72867946-72867965 Msa0223330:three_prime_UTR 60.0%
GGTTTAGGAGGGGAAAGGGG+AGG - chr2_1:72868736-72868755 Msa0223330:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr2_1:72868920-72868939 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr2_1:72868921-72868940 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr2_1:72868922-72868941 None:intergenic 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr2_1:72868920-72868939 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr2_1:72868921-72868940 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr2_1:72868922-72868941 None:intergenic 60.0%
GTTGCCGACCCCACTTAGTG+GGG - chr2_1:72869724-72869743 Msa0223330:CDS 60.0%
GGGTACGAAGCTGCGCTGAA+AGG + chr2_1:72870814-72870833 None:intergenic 60.0%
!! GGCTATCTGGTTCTAGGCGG+AGG - chr2_1:72870944-72870963 Msa0223330:intron 60.0%
TAGGAGTGGTCCCCGGTAAC+TGG - chr2_1:72871588-72871607 Msa0223330:intron 60.0%
AACATCACCGCCCCCGTCGT+GGG - chr2_1:72867934-72867953 Msa0223330:three_prime_UTR 65.0%
GCCCCCGTCGTGGGTAACAA+TGG - chr2_1:72867943-72867962 Msa0223330:three_prime_UTR 65.0%
AGCCAGGTTCCGACCATCCC+CGG - chr2_1:72868163-72868182 Msa0223330:three_prime_UTR 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr2_1:72869386-72869405 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr2_1:72869385-72869404 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr2_1:72869385-72869404 Msa0223330:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - chr2_1:72869386-72869405 Msa0223330:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr2_1:72869386-72869405 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr2_1:72869385-72869404 None:intergenic 65.0%
GAACATCACCGCCCCCGTCG+TGG - chr2_1:72867933-72867952 Msa0223330:three_prime_UTR 70.0%
GACCGGGGATGGTCGGAACC+TGG + chr2_1:72868168-72868187 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72867800 72875210 72867800 ID=Msa0223330;Name=Msa0223330
chr2_1 mRNA 72867800 72875210 72867800 ID=Msa0223330-mRNA-1;Parent=Msa0223330;Name=Msa0223330-mRNA-1;_AED=0.18;_eAED=0.18;_QI=162|0.92|0.92|1|0.92|1|14|396|416
chr2_1 exon 72867800 72868271 72867800 ID=Msa0223330-mRNA-1:exon:21188;Parent=Msa0223330-mRNA-1
chr2_1 exon 72868383 72868492 72868383 ID=Msa0223330-mRNA-1:exon:21187;Parent=Msa0223330-mRNA-1
chr2_1 exon 72868851 72869000 72868851 ID=Msa0223330-mRNA-1:exon:21186;Parent=Msa0223330-mRNA-1
chr2_1 exon 72869705 72869809 72869705 ID=Msa0223330-mRNA-1:exon:21185;Parent=Msa0223330-mRNA-1
chr2_1 exon 72869898 72869987 72869898 ID=Msa0223330-mRNA-1:exon:21184;Parent=Msa0223330-mRNA-1
chr2_1 exon 72871162 72871199 72871162 ID=Msa0223330-mRNA-1:exon:21183;Parent=Msa0223330-mRNA-1
chr2_1 exon 72871681 72871807 72871681 ID=Msa0223330-mRNA-1:exon:21182;Parent=Msa0223330-mRNA-1
chr2_1 exon 72871895 72872050 72871895 ID=Msa0223330-mRNA-1:exon:21181;Parent=Msa0223330-mRNA-1
chr2_1 exon 72872136 72872204 72872136 ID=Msa0223330-mRNA-1:exon:21180;Parent=Msa0223330-mRNA-1
chr2_1 exon 72872286 72872363 72872286 ID=Msa0223330-mRNA-1:exon:21179;Parent=Msa0223330-mRNA-1
chr2_1 exon 72872538 72872591 72872538 ID=Msa0223330-mRNA-1:exon:21178;Parent=Msa0223330-mRNA-1
chr2_1 exon 72872683 72872772 72872683 ID=Msa0223330-mRNA-1:exon:21177;Parent=Msa0223330-mRNA-1
chr2_1 exon 72874842 72874913 72874842 ID=Msa0223330-mRNA-1:exon:21176;Parent=Msa0223330-mRNA-1
chr2_1 exon 72875013 72875210 72875013 ID=Msa0223330-mRNA-1:exon:21175;Parent=Msa0223330-mRNA-1
chr2_1 five_prime_UTR 72875049 72875210 72875049 ID=Msa0223330-mRNA-1:five_prime_utr;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72875013 72875048 72875013 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72874842 72874913 72874842 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72872683 72872772 72872683 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72872538 72872591 72872538 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72872286 72872363 72872286 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72872136 72872204 72872136 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72871895 72872050 72871895 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72871681 72871807 72871681 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72871162 72871199 72871162 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72869898 72869987 72869898 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72869705 72869809 72869705 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72868851 72869000 72868851 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72868383 72868492 72868383 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 CDS 72868196 72868271 72868196 ID=Msa0223330-mRNA-1:cds;Parent=Msa0223330-mRNA-1
chr2_1 three_prime_UTR 72867800 72868195 72867800 ID=Msa0223330-mRNA-1:three_prime_utr;Parent=Msa0223330-mRNA-1
Gene Sequence

>Msa0223330

ATGGAGGCTCGTCATGCATCTCTAGGTCGACGAACGCTTGAGGAAATTCGTCAAAAGAGAGCACAGGATAGATTGGTTAAAGCCTCTTCTGGACCAGATCTAAGCCAGGCAGATGTTAGTTCCCTATTATCTCAAATAAAAGTTCTGCAAAGGAAGAACAATGAGTTGGATGAAGAAAACAGGAAAATAACTTCGAAGCTTCAAACGATGGAAATTGATAATGGTGCAATGCACAAGCAGTTGAATGAACTGGAGCAAAATACGGTACCATCTCTTAGGAAAGCTCTCAGGGATGTTGCAATGGAGAAAGATGCTGCAGTTGTTGCACGAGAGGACCTTTCAGCGCAGCTTCGTACCCTGAAGAAACGTCTTAAGGATGCTGAAGAGGAGCAATATCGTGCGGAGGAAGATGCAGCAGCATTGCGAGCAGAATTGAACTCAATTCAGCAACAATCAATGACTAACACAGTTAGTACAATACCATCTATTGGTCCACCCGACCACCATCTTCAAATATTAGAAAATGAGCTAGCTGGTTTAAAATTGGAACTACAGCGTGAGTCACTGATGAGGCACCAGGGGCAAGAACAGTTAGCTAAAGAGCAAAGCCGCATTGCATCACTGATGTCTGAAAAGCAAGAGTTGGAAGAAAAATTAAACTCCATGTCAAGAGAGGCTGCAGAAGTCTCAGGTAAAGCAACTCAGAAGACATTCACTATGGAAGACAAGCAGAAACTTGATAAGCAGTTGCATGATATGGCGTTAGCTGTAGAGAGGTTGGAAAACAGTAGACAGAAACTTCTAATGGAGATTGATTCGCAATCTACAGAAATAGAGAAACTTTTTGATGAAAATTCTACTCTCTCAAATTCATATCAAGAGGCAATTGGAGCAGCAGCAAGATGGGAAAACCAGGTGATGGAGTGTCTTAAGCAAAATGAAGAGCTGCGTGGGATTCTAGAAAAATTACGAGTGGAACAGGCCAATGGCTTACCAGAATCCATTAAGAACGAGGTACACGAGGTTGGTTCCTCGACATCTACAGGAGAGGTGGCATCTCTGAAGGGCCAACTTGTGAAGGAACTGAGCAGAGCAGAGGCACTGTCAGCAGAAGTCATGCAGCTCTCTGCACAACTTGAACAAGTCAAACAAGCATATGATGGTCTTGCACGCTTTTATATGCCAGTGCTGCGCAACATTGAAAGTGGTCTCATAAAAATGAAGCAAGACAGTTCATTGGTTGTACGATAA

Protein sequence

>Msa0223330

MEARHASLGRRTLEEIRQKRAQDRLVKASSGPDLSQADVSSLLSQIKVLQRKNNELDEENRKITSKLQTMEIDNGAMHKQLNELEQNTVPSLRKALRDVAMEKDAAVVAREDLSAQLRTLKKRLKDAEEEQYRAEEDAAALRAELNSIQQQSMTNTVSTIPSIGPPDHHLQILENELAGLKLELQRESLMRHQGQEQLAKEQSRIASLMSEKQELEEKLNSMSREAAEVSGKATQKTFTMEDKQKLDKQLHDMALAVERLENSRQKLLMEIDSQSTEIEKLFDENSTLSNSYQEAIGAAARWENQVMECLKQNEELRGILEKLRVEQANGLPESIKNEVHEVGSSTSTGEVASLKGQLVKELSRAEALSAEVMQLSAQLEQVKQAYDGLARFYMPVLRNIESGLIKMKQDSSLVVR*