AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1329020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329020 MtrunA17_Chr4g0053441 96.382 608 12 1 40 637 222 829 0.0 1191
Msa1329020 MtrunA17_Chr2g0297871 29.338 559 345 11 47 599 27 541 2.18e-60 213
Msa1329020 MtrunA17_Chr4g0050431 30.368 517 324 13 84 588 391 883 1.80e-55 203
Msa1329020 MtrunA17_Chr4g0071991 27.641 568 351 12 39 594 176 695 2.23e-50 188
Msa1329020 MtrunA17_Chr5g0397621 32.193 497 297 14 100 577 385 860 6.64e-49 184
Msa1329020 MtrunA17_Chr3g0136331 29.651 516 317 12 83 573 354 848 1.48e-43 167
Msa1329020 MtrunA17_Chr8g0339181 29.679 529 317 14 66 573 420 914 1.77e-42 164
Msa1329020 MtrunA17_Chr2g0297051 25.980 612 370 15 19 577 407 988 1.38e-40 159
Msa1329020 MtrunA17_Chr4g0052521 25.522 623 364 17 19 577 370 956 2.30e-40 158
Msa1329020 MtrunA17_Chr8g0374321 32.661 248 151 5 45 283 429 669 5.14e-24 107
Msa1329020 MtrunA17_Chr8g0374391 32.955 176 108 4 409 577 30 202 1.37e-16 79.7
Msa1329020 MtrunA17_Chr8g0374331 32.955 176 108 4 409 577 37 209 1.51e-16 79.7
Msa1329020 MtrunA17_Chr8g0374371 34.014 147 88 3 100 238 42 187 3.49e-13 69.7
Msa1329020 MtrunA17_Chr7g0263361 27.982 218 113 8 406 580 616 832 7.20e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329020 AT4G37270.1 76.401 589 128 2 40 618 218 805 0.0 907
Msa1329020 AT5G21930.2 31.022 548 311 14 64 573 322 840 4.08e-51 190
Msa1329020 AT5G21930.1 31.022 548 311 14 64 573 322 840 4.08e-51 190
Msa1329020 AT4G30110.1 27.481 524 344 11 82 599 203 696 9.20e-51 189
Msa1329020 AT4G30110.2 27.481 524 344 11 82 599 203 696 9.20e-51 189
Msa1329020 AT2G19110.2 28.488 516 326 15 93 599 224 705 1.71e-50 189
Msa1329020 AT2G19110.3 28.488 516 326 15 93 599 224 705 1.71e-50 189
Msa1329020 AT2G19110.1 28.488 516 326 15 93 599 224 705 1.71e-50 189
Msa1329020 AT4G33520.2 29.559 521 321 15 84 588 402 892 1.32e-48 183
Msa1329020 AT4G33520.3 29.767 514 321 15 84 580 402 892 1.76e-48 183
Msa1329020 AT5G21930.4 31.311 511 285 13 64 536 322 804 5.90e-48 181
Msa1329020 AT1G63440.1 31.548 504 292 15 100 577 478 954 4.61e-47 179
Msa1329020 AT5G44790.1 28.488 516 317 14 89 575 464 956 1.04e-44 172
Msa1329020 AT5G21930.3 29.380 548 297 16 64 573 322 817 1.23e-40 159
Msa1329020 AT4G30120.2 25.616 406 252 10 39 436 19 382 2.27e-30 123
Msa1329020 AT4G30120.1 25.616 406 252 10 39 436 178 541 2.22e-29 123

Find 199 sgRNAs with CRISPR-Local

Find 638 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAGAGGTTTGATAGAAAT+TGG 0.118156 8_4:+47115186 None:intergenic
GGCTTCCCTTCCGTCAGTTT+TGG 0.178850 8_4:-47106733 Msa1329020:CDS
GGACGCTATCTTAAAATAAT+AGG 0.188756 8_4:+47105951 None:intergenic
TCAATTGCTATTGCTGTTCT+TGG 0.210359 8_4:-47112349 Msa1329020:CDS
TATGATTATGATTATGAGTA+TGG 0.221106 8_4:+47115091 None:intergenic
GGCATTGTCTAGCATATTCT+TGG 0.228426 8_4:-47106754 Msa1329020:CDS
TGAGAGAATCAGAGTTTATT+AGG 0.252527 8_4:+47115382 None:intergenic
CAAAGGTGGCTGGATGAATT+TGG 0.281364 8_4:-47112403 Msa1329020:CDS
TCCAGCCACCTTTGAAGTTT+AGG 0.293991 8_4:+47112412 None:intergenic
CGACCAGAATGAACGAGTTT+TGG 0.294272 8_4:+47114827 None:intergenic
GCTATTAATGCATCTTCTTA+TGG 0.295250 8_4:-47109412 Msa1329020:CDS
TTTCAAATGGAATAATAAAA+TGG 0.300476 8_4:-47105909 Msa1329020:three_prime_UTR
AACAACTGCACCACAATAAA+AGG 0.302467 8_4:-47115413 Msa1329020:five_prime_UTR
ACTTCTCGTGCTGTTATAAC+AGG 0.312428 8_4:+47105853 None:intergenic
ACCATTGCATTTGATAAAAC+AGG 0.313148 8_4:-47110482 Msa1329020:CDS
GTCAATCCATTTGGTAGCTT+TGG 0.315025 8_4:+47114960 None:intergenic
GCAACTTATCTTCAGGCTTC+AGG 0.315496 8_4:+47108251 None:intergenic
TATTTGAAATCAAATGTATT+AGG 0.327072 8_4:+47113769 None:intergenic
TCAAGAACAAGTGCAAATTC+TGG 0.329012 8_4:+47113811 None:intergenic
TGGTCGCATTTCCGTTGGTT+GGG 0.332817 8_4:-47114810 Msa1329020:CDS
ACTCAAAGGTGGACATGTTC+TGG 0.334899 8_4:-47110525 Msa1329020:CDS
AGAGAGGTTTGATAGAAATT+GGG 0.342658 8_4:+47115187 None:intergenic
AAGGCAATTGAGCCTGTTTA+CGG 0.342799 8_4:-47110431 Msa1329020:CDS
AAAGGATATCTCAAGAGATA+TGG 0.345113 8_4:-47108221 Msa1329020:CDS
TGTCCAAAACTCGTTCATTC+TGG 0.352789 8_4:-47114830 Msa1329020:CDS
GGTTCTATCTACAGAGCCTT+AGG 0.363004 8_4:-47111597 Msa1329020:CDS
GACAGGTTTGATGAGTGATT+TGG 0.363726 8_4:+47114849 None:intergenic
TTCCATTTGAAAGGCAAAAC+GGG 0.367247 8_4:+47105920 None:intergenic
AAAGTTGGAGATAGAGTTCC+TGG 0.368979 8_4:-47113296 Msa1329020:CDS
CACTTGCTGCTGCAACTGTT+GGG 0.374065 8_4:-47107038 Msa1329020:CDS
CTGTAATATATCATGCTTCC+AGG 0.374765 8_4:+47106193 None:intergenic
TGAAGTTGTCTGCCGAGATT+TGG 0.379930 8_4:+47106921 None:intergenic
GACGCTATCTTAAAATAATA+GGG 0.379983 8_4:+47105952 None:intergenic
CATGATATATTACAGTTGAT+TGG 0.380717 8_4:-47106185 Msa1329020:CDS
TGCCTTGGCTGTGGCTCCAT+TGG 0.384104 8_4:-47111550 Msa1329020:CDS
AATCTAGACTCTCCTCTCTT+AGG 0.385080 8_4:-47106154 Msa1329020:CDS
TATGATTATGAGTATGGTTA+TGG 0.386196 8_4:+47115097 None:intergenic
ATGATGGAGAATGAGGAATT+TGG 0.390636 8_4:+47115158 None:intergenic
CTGGTCGCATTTCCGTTGGT+TGG 0.392485 8_4:-47114811 Msa1329020:CDS
AATACCCCTTGTAAATGTAT+AGG 0.402784 8_4:-47106005 Msa1329020:three_prime_UTR
ACATGACGCAACTTATCTTC+AGG 0.418228 8_4:+47108244 None:intergenic
ATTCGCTAGGTCAATCCATT+TGG 0.420166 8_4:+47114951 None:intergenic
GCACTTGCTGCTGCAACTGT+TGG 0.421771 8_4:-47107039 Msa1329020:CDS
TCTCTTAGGACAAATATAAC+AGG 0.423503 8_4:-47106140 Msa1329020:CDS
ATAGGGAATGTCCAATACTT+TGG 0.425078 8_4:+47105969 None:intergenic
TAGGGAATGTCCAATACTTT+GGG 0.426341 8_4:+47105970 None:intergenic
AGTGATTTGGGCAAAGTATG+AGG 0.430434 8_4:+47114862 None:intergenic
ATTACCATTGAGCACTTGAC+AGG 0.431899 8_4:-47113341 Msa1329020:CDS
ACAGGTTTGATGAGTGATTT+GGG 0.433483 8_4:+47114850 None:intergenic
AGTGAATGGAATTTGGTAGA+TGG 0.440192 8_4:+47115273 None:intergenic
TGTTGCGGCAGCCATGGAAA+AGG 0.442091 8_4:-47110336 Msa1329020:CDS
CTAATGCGATGACCGTAAAC+AGG 0.447398 8_4:+47110419 None:intergenic
ACAGTTGCAGCAGCAAGTGC+TGG 0.448739 8_4:+47107042 None:intergenic
ATTCCATTTGAAAGGCAAAA+CGG 0.453876 8_4:+47105919 None:intergenic
TTGGTCCACTTGTATTTAAG+TGG 0.454297 8_4:-47112330 Msa1329020:CDS
TTGTGTGGGTGTGAAGTGAA+TGG 0.454372 8_4:+47115259 None:intergenic
TTTGAGTACTTTCCTGGTAG+AGG 0.454663 8_4:-47109898 Msa1329020:CDS
TACTGGTGGACTTGTATTCA+AGG 0.458170 8_4:-47110450 Msa1329020:CDS
ACCCAAGTGATGCTTTCAAT+AGG 0.465409 8_4:+47109494 None:intergenic
AGGAACTCTATCTCCAACTT+TGG 0.466602 8_4:+47113298 None:intergenic
GGTTGATGTTAAAGAGTTGA+AGG 0.467608 8_4:-47113842 Msa1329020:CDS
CTGGAGGATAGGCCTCGTCC+AGG 0.469698 8_4:-47108400 Msa1329020:CDS
TCAAAATGATACCTTCCAAT+GGG 0.470455 8_4:+47110302 None:intergenic
ACCTAAACTTCAAAGGTGGC+TGG 0.472188 8_4:-47112413 Msa1329020:CDS
TTGCATTCCCACCTGTGAAA+AGG 0.475193 8_4:-47110369 Msa1329020:CDS
ATTTCTTCCATTGTGGATAA+CGG 0.475920 8_4:-47106709 Msa1329020:intron
GGTCGCATTTCCGTTGGTTG+GGG 0.477467 8_4:-47114809 Msa1329020:intron
AAACCTCTGGAGGCCAAAGT+TGG 0.479488 8_4:-47113311 Msa1329020:CDS
TGCAGCATCACCATGTGCCT+TGG 0.480763 8_4:-47111565 Msa1329020:CDS
GTATTTCACAAGTCGTTCAA+TGG 0.480835 8_4:-47113863 Msa1329020:CDS
TGGAGGATAGGCCTCGTCCA+GGG 0.482722 8_4:-47108399 Msa1329020:CDS
TTCCGTGTGATGATGTTAAC+TGG 0.483577 8_4:-47108337 Msa1329020:CDS
ATCACCATGTGCCTTGGCTG+TGG 0.483615 8_4:-47111559 Msa1329020:CDS
AACAACGAAGTTTATGATGA+TGG 0.484541 8_4:+47115142 None:intergenic
GTTTCGCCAAAGCTACCAAA+TGG 0.487686 8_4:-47114966 Msa1329020:five_prime_UTR
GGCGGTGCAAGGAACATAGA+TGG 0.488667 8_4:-47113275 Msa1329020:CDS
TCCAAAACTTGTTACCTCTC+CGG 0.488744 8_4:+47113693 None:intergenic
GTGGGATCATATGTCCTTGT+TGG 0.491264 8_4:-47113718 Msa1329020:CDS
CGTTGATTCACCTGGAGGAT+AGG 0.491810 8_4:-47108411 Msa1329020:CDS
CATTCTGGTCGCATTTCCGT+TGG 0.493184 8_4:-47114815 Msa1329020:CDS
TAAATGAACCATCCTGGTCC+TGG 0.493505 8_4:-47106211 Msa1329020:CDS
GAAATTGGGGATGTGCGAAT+AGG 0.494228 8_4:+47115201 None:intergenic
GGCTTAATTATGGTTGGTGA+AGG 0.494682 8_4:-47107078 Msa1329020:CDS
ATCGATGATGCGAATCTCAC+TGG 0.494904 8_4:-47115009 Msa1329020:five_prime_UTR
TGGTTCATTTAAACCACGTA+TGG 0.495446 8_4:+47106223 None:intergenic
AATAGGAAAAGCGAGGTTAG+AGG 0.496704 8_4:+47115218 None:intergenic
TAATAAAATGGCAAATATCA+AGG 0.499878 8_4:-47105897 Msa1329020:three_prime_UTR
GTTGCGGCAGCCATGGAAAA+GGG 0.505287 8_4:-47110335 Msa1329020:CDS
TTCAAAATGATACCTTCCAA+TGG 0.509760 8_4:+47110301 None:intergenic
TCATATGTCCTTGTTGGTGC+CGG 0.510228 8_4:-47113712 Msa1329020:CDS
GTGAATGGAATTTGGTAGAT+GGG 0.511154 8_4:+47115274 None:intergenic
AGGAATTTGGAAGAATAGAG+AGG 0.513522 8_4:+47115171 None:intergenic
GATTAAGCAAAATGTAGCTC+TGG 0.514025 8_4:-47106775 Msa1329020:CDS
AAGGATATCTCAAGAGATAT+GGG 0.514882 8_4:-47108220 Msa1329020:intron
TGCTGTTAACAGTAGCAGTA+AGG 0.516956 8_4:+47109875 None:intergenic
AACCTATTGAAAGCATCACT+TGG 0.517138 8_4:-47109496 Msa1329020:CDS
CTACAGAGCCTTAGGGCTCA+TGG 0.522521 8_4:-47111589 Msa1329020:CDS
CGGTCATCGCATTAGAAACA+AGG 0.525626 8_4:-47110411 Msa1329020:CDS
AAAGGAAGCTCTTGCTGTTG+CGG 0.526765 8_4:-47110351 Msa1329020:CDS
TTCCCCTGTCAAGTGCTCAA+TGG 0.526856 8_4:+47113337 None:intergenic
GGTGTGAAGTGAATGGAATT+TGG 0.527710 8_4:+47115266 None:intergenic
AGATAAGTTGCGTCATGTAA+AGG 0.529752 8_4:-47108239 Msa1329020:CDS
TCTTGCTGTTGCGGCAGCCA+TGG 0.531269 8_4:-47110342 Msa1329020:CDS
TGTTATAACAGCACGAGAAG+TGG 0.532474 8_4:-47105851 Msa1329020:three_prime_UTR
GTTATGATCGGTGTGATTTG+CGG 0.532890 8_4:+47115119 None:intergenic
GAGAGGTTTGATAGAAATTG+GGG 0.535581 8_4:+47115188 None:intergenic
GTTTATGATGATGGAGAATG+AGG 0.537798 8_4:+47115151 None:intergenic
TCTCCAACTTTGGCCTCCAG+AGG 0.537839 8_4:+47113308 None:intergenic
GTGATTTGGGCAAAGTATGA+GGG 0.538012 8_4:+47114863 None:intergenic
TTTGTTGATGCAGCTTGCAG+AGG 0.543905 8_4:-47111618 Msa1329020:intron
TATCGTGGACAGGAACCCTC+TGG 0.544668 8_4:+47113746 None:intergenic
TATATCATGCTTCCAGGACC+AGG 0.545479 8_4:+47106199 None:intergenic
GACAGGGGAAGTCAAACCTC+TGG 0.545837 8_4:-47113324 Msa1329020:CDS
GCAGGTCACGTTGATTCACC+TGG 0.549731 8_4:-47108419 Msa1329020:intron
TGGAAAACTTCACAATCTAC+AGG 0.552595 8_4:+47113377 None:intergenic
AAGATGCCTATACATTTACA+AGG 0.555098 8_4:+47105999 None:intergenic
ATCTCGGCAGACAACTTCAC+TGG 0.558427 8_4:-47106917 Msa1329020:intron
AAGGGCACTACCCACCCCAT+TGG 0.559044 8_4:-47110317 Msa1329020:CDS
CATTCTGTATTGCCAAATCT+CGG 0.561945 8_4:-47106933 Msa1329020:CDS
TATATTACAGTTGATTGGCA+AGG 0.564000 8_4:-47106180 Msa1329020:CDS
TGAATAGACCTAAACTTCAA+AGG 0.565264 8_4:-47112420 Msa1329020:CDS
GTACCTGGTGTACTAAAGAA+TGG 0.569445 8_4:+47112307 None:intergenic
CGAGATTTGGCAATACAGAA+TGG 0.570862 8_4:+47106934 None:intergenic
ATGATACCTTCCAATGGGGT+GGG 0.570870 8_4:+47110307 None:intergenic
AATGATACCTTCCAATGGGG+TGG 0.571569 8_4:+47110306 None:intergenic
CCCACAGTTATATCGTGGAC+AGG 0.573819 8_4:+47113736 None:intergenic
GTTCTATCTACAGAGCCTTA+GGG 0.574940 8_4:-47111596 Msa1329020:CDS
GTTAGAGGATTTGATCCTTG+TGG 0.578477 8_4:+47115233 None:intergenic
CCATTGCATTTGATAAAACA+GGG 0.581955 8_4:-47110481 Msa1329020:CDS
ATAGAGTTCCTGGCGGTGCA+AGG 0.582278 8_4:-47113286 Msa1329020:CDS
GTTTGTCTCAACTCCATACG+TGG 0.582771 8_4:-47106236 Msa1329020:CDS
TCTATGTTCCTTGCACCGCC+AGG 0.583235 8_4:+47113278 None:intergenic
TGCTGCAACCATGAGCCCTA+AGG 0.586386 8_4:+47111581 None:intergenic
TGCTACTGTTAACAGCATTG+AGG 0.587811 8_4:-47109869 Msa1329020:intron
TGCACAGGAGCTGATTGCTG+TGG 0.588322 8_4:+47111521 None:intergenic
AAAACAGGGACATTGACTAC+TGG 0.589422 8_4:-47110467 Msa1329020:CDS
TCCATTTGAAAGGCAAAACG+GGG 0.589547 8_4:+47105921 None:intergenic
TAAAATGAATTGCAGGGCTG+TGG 0.592347 8_4:-47109968 Msa1329020:intron
TGGCCATTCTTTAGTACACC+AGG 0.592719 8_4:-47112310 Msa1329020:intron
GAAATCCCAAAACTGACGGA+AGG 0.592946 8_4:+47106727 None:intergenic
TTACCATTGAGCACTTGACA+GGG 0.593656 8_4:-47113340 Msa1329020:CDS
ACAGGGACATTGACTACTGG+TGG 0.595895 8_4:-47110464 Msa1329020:CDS
TTGTTATAGTCAGGAGCTGG+AGG 0.596664 8_4:-47109523 Msa1329020:intron
GTGGTTTAAATGAACCATCC+TGG 0.596951 8_4:-47106217 Msa1329020:CDS
AATGGCCACTTAAATACAAG+TGG 0.597154 8_4:+47112325 None:intergenic
GCTCTCTCAAGAAATTCGCT+AGG 0.601109 8_4:+47114938 None:intergenic
TAGTTTCTTACCCCAACCAA+CGG 0.601581 8_4:+47114799 None:intergenic
TGGTAATTGTGGCACCGCCG+TGG 0.601583 8_4:+47113357 None:intergenic
GTAGCAGTAAGGCCTCTACC+AGG 0.601894 8_4:+47109886 None:intergenic
ACCTATTGAAAGCATCACTT+GGG 0.602175 8_4:-47109495 Msa1329020:CDS
CTTGTTACGGGTCATTACAG+TGG 0.604049 8_4:+47115444 None:intergenic
TGCCAATGGAGCCACAGCCA+AGG 0.608775 8_4:+47111548 None:intergenic
TGTTATATTTGTCCTAAGAG+AGG 0.609994 8_4:+47106142 None:intergenic
CATCACAGGTAACAAAGACA+TGG 0.612204 8_4:-47112492 Msa1329020:intron
ATTGCTGTGGCATATGCCAA+TGG 0.613253 8_4:+47111534 None:intergenic
CTGTGGTTGAACATAGTGAA+GGG 0.614550 8_4:-47109951 Msa1329020:CDS
TGATTTGGGCAAAGTATGAG+GGG 0.620042 8_4:+47114864 None:intergenic
GCACTACCCACCCCATTGGA+AGG 0.620348 8_4:-47110313 Msa1329020:intron
ATTTGATTTCAAATACCAGA+GGG 0.624066 8_4:-47113761 Msa1329020:CDS
AAATCCCAAAACTGACGGAA+GGG 0.625234 8_4:+47106728 None:intergenic
ATGCAGGTTCTCTTACATGA+AGG 0.625523 8_4:-47106272 Msa1329020:intron
GGAGCCACAGCCAAGGCACA+TGG 0.627092 8_4:+47111555 None:intergenic
TGTCATACCGTTATCCACAA+TGG 0.627678 8_4:+47106702 None:intergenic
CTACACACATCACAAATTCG+CGG 0.629168 8_4:+47106100 None:intergenic
AGATGCCTATACATTTACAA+GGG 0.630095 8_4:+47106000 None:intergenic
GCGTTACAGCAAAGTTGTTG+TGG 0.631820 8_4:-47112377 Msa1329020:CDS
AAGAGAGTTGCAAGTGCTGT+GGG 0.633487 8_4:-47108295 Msa1329020:CDS
TTGCAGGGCATATTACTCAA+AGG 0.636255 8_4:-47110539 Msa1329020:intron
AAAGAGAGTTGCAAGTGCTG+TGG 0.636430 8_4:-47108296 Msa1329020:CDS
GCTGTGGTTGAACATAGTGA+AGG 0.636595 8_4:-47109952 Msa1329020:CDS
ACAGGTAACAAAGACATGGA+AGG 0.636600 8_4:-47112488 Msa1329020:intron
TTACCTCTCCGGCACCAACA+AGG 0.637057 8_4:+47113704 None:intergenic
CAGGGCATATTACTCAAAGG+TGG 0.637638 8_4:-47110536 Msa1329020:CDS
TCCTGTCCACGATATAACTG+TGG 0.638620 8_4:-47113737 Msa1329020:CDS
CCTGTCCACGATATAACTGT+GGG 0.640509 8_4:-47113736 Msa1329020:CDS
TGTCCTTGTTGGTGCCGGAG+AGG 0.641083 8_4:-47113707 Msa1329020:intron
AGATGGTAGAATAATTGTGA+AGG 0.643350 8_4:-47113258 Msa1329020:intron
TCATGCTTCCAGGACCAGGA+TGG 0.644114 8_4:+47106203 None:intergenic
ATGATCCCACAGTTATATCG+TGG 0.648538 8_4:+47113731 None:intergenic
GTTACGGGTCATTACAGTGG+AGG 0.648616 8_4:+47115447 None:intergenic
AGTATGGTTATGGTTATGAT+CGG 0.651815 8_4:+47115107 None:intergenic
GGAAGAAATCCCAAAACTGA+CGG 0.653538 8_4:+47106723 None:intergenic
CTTCTCGTGCTGTTATAACA+GGG 0.657074 8_4:+47105854 None:intergenic
CACCAGTTAACATCATCACA+CGG 0.657313 8_4:+47108335 None:intergenic
CATTTGATTTCAAATACCAG+AGG 0.660551 8_4:-47113762 Msa1329020:CDS
TACCATTGAGCACTTGACAG+GGG 0.669528 8_4:-47113339 Msa1329020:CDS
GGAGTTGAGACAAACAAGCA+AGG 0.669963 8_4:+47106244 None:intergenic
ATAGACCTAAACTTCAAAGG+TGG 0.670685 8_4:-47112417 Msa1329020:CDS
AGGGGAAGTCAAACCTCTGG+AGG 0.671091 8_4:-47113321 Msa1329020:CDS
CAGGTTCTCTTACATGAAGG+CGG 0.671593 8_4:-47106269 Msa1329020:CDS
AGTAGAGAAATAGTGTATTG+CGG 0.672392 8_4:-47106066 Msa1329020:three_prime_UTR
GATGCCTATACATTTACAAG+GGG 0.678179 8_4:+47106001 None:intergenic
CAAGTGCTCAATGGTAATTG+TGG 0.696113 8_4:+47113346 None:intergenic
CAAAATGATACCTTCCAATG+GGG 0.711661 8_4:+47110303 None:intergenic
CCATTTGAAAGGCAAAACGG+GGG 0.719580 8_4:+47105922 None:intergenic
TTTCAACAGAGACAGAAGGG+AGG 0.724915 8_4:+47109923 None:intergenic
GGTCACGTTGATTCACCTGG+AGG 0.730026 8_4:-47108416 Msa1329020:CDS
ATGTGCGAATAGGAAAAGCG+AGG 0.738586 8_4:+47115211 None:intergenic
GTTGGAGATAGAGTTCCTGG+CGG 0.796828 8_4:-47113293 Msa1329020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAAAATATATTTTTTA+AGG + chr8_4:47112550-47112569 None:intergenic 0.0%
!! AAAGAAAAAAATAATTTACA+TGG - chr8_4:47109231-47109250 Msa1329020:intron 10.0%
!! AAGAAAAAAATAATTTACAT+GGG - chr8_4:47109232-47109251 Msa1329020:intron 10.0%
!!! TTATTCAAAATTTTAAACAT+GGG - chr8_4:47110691-47110710 Msa1329020:intron 10.0%
!!! TACCTTTTTATTAATTATAA+GGG + chr8_4:47111924-47111943 None:intergenic 10.0%
!!! AAATAATTTTCAAAATAAAC+AGG + chr8_4:47112358-47112377 None:intergenic 10.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr8_4:47112578-47112597 Msa1329020:intron 10.0%
!! TTTAGTAAAAATTATTATTG+TGG - chr8_4:47113320-47113339 Msa1329020:CDS 10.0%
!! TTAGTAAAAATTATTATTGT+GGG - chr8_4:47113321-47113340 Msa1329020:CDS 10.0%
!! TACAAAATTATTATAAAATG+AGG - chr8_4:47113409-47113428 Msa1329020:intron 10.0%
!! AGTATTAAGAATTTAAAAAA+AGG + chr8_4:47113444-47113463 None:intergenic 10.0%
!! AGGATATTTAAAAATAAATT+AGG + chr8_4:47113522-47113541 None:intergenic 10.0%
!! AAAAAAATAAAAATTGAGAA+AGG - chr8_4:47113828-47113847 Msa1329020:CDS 10.0%
!! AAAAAATAAAAATTGAGAAA+GGG - chr8_4:47113829-47113848 Msa1329020:CDS 10.0%
!!! TTTTAAAGAAAAAAAAAATG+TGG - chr8_4:47114415-47114434 Msa1329020:intron 10.0%
!!! TTTATTTTCTTTAGAAATTA+TGG - chr8_4:47114720-47114739 Msa1329020:intron 10.0%
!! AGAAAAATAATACTTTATTA+GGG + chr8_4:47114893-47114912 None:intergenic 10.0%
!! AAGAAAAATAATACTTTATT+AGG + chr8_4:47114894-47114913 None:intergenic 10.0%
!!! ACATTCAACTTTTATAATAA+TGG - chr8_4:47105936-47105955 Msa1329020:three_prime_UTR 15.0%
!! TTAATCAAACAAATACATTA+TGG - chr8_4:47106787-47106806 Msa1329020:intron 15.0%
!!! TATTTGAAATCAAATGTATT+AGG + chr8_4:47107524-47107543 None:intergenic 15.0%
!!! TCAATATATATTATTTTAGG+AGG - chr8_4:47108348-47108367 Msa1329020:CDS 15.0%
!!! TATAATGGAGATATTTATAA+TGG + chr8_4:47108514-47108533 None:intergenic 15.0%
!! TTAAATGATAATTAAAGGAA+AGG + chr8_4:47109113-47109132 None:intergenic 15.0%
!! TTCCTTTAATTATCATTTAA+TGG - chr8_4:47109113-47109132 Msa1329020:intron 15.0%
!! TTCCATTAAATGATAATTAA+AGG + chr8_4:47109118-47109137 None:intergenic 15.0%
!!! GGAAAAAAAAAACTTTATTT+TGG - chr8_4:47110130-47110149 Msa1329020:intron 15.0%
!!! CTTATTCAAAATTTTAAACA+TGG - chr8_4:47110690-47110709 Msa1329020:intron 15.0%
!! CTATATTTATATATTTGAGA+TGG + chr8_4:47111248-47111267 None:intergenic 15.0%
!!! CTACCTTTTTATTAATTATA+AGG + chr8_4:47111925-47111944 None:intergenic 15.0%
!!! AGAAATGATATTTTTTATGT+TGG - chr8_4:47112046-47112065 Msa1329020:intron 15.0%
!! ACCAATTTCTAAATTTAATA+AGG - chr8_4:47112175-47112194 Msa1329020:intron 15.0%
!! ACCTTATTAAATTTAGAAAT+TGG + chr8_4:47112179-47112198 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG - chr8_4:47112701-47112720 Msa1329020:intron 15.0%
!!! AAAATTTTAGGTGAAAAAAA+AGG + chr8_4:47112727-47112746 None:intergenic 15.0%
!! TGTTAGAAATAATGTAAATA+GGG - chr8_4:47113169-47113188 Msa1329020:intron 15.0%
!!! TATATTTATTCATTAGTCTA+CGG + chr8_4:47113375-47113394 None:intergenic 15.0%
!! TAAGAATTTAAAAAAAGGAA+TGG + chr8_4:47113439-47113458 None:intergenic 15.0%
!! GTGTTTATATAACAAAAAAA+GGG + chr8_4:47113493-47113512 None:intergenic 15.0%
!! TGTGTTTATATAACAAAAAA+AGG + chr8_4:47113494-47113513 None:intergenic 15.0%
!! AAAAATAAAAATTGAGAAAG+GGG - chr8_4:47113830-47113849 Msa1329020:CDS 15.0%
!! GAAAAATAATACTTTATTAG+GGG + chr8_4:47114892-47114911 None:intergenic 15.0%
!!! ATTTTATTATTCCATTTGAA+AGG + chr8_4:47115382-47115401 None:intergenic 15.0%
!! TTTCAAATGGAATAATAAAA+TGG - chr8_4:47115381-47115400 Msa1329020:five_prime_UTR 15.0%
!!! TTGTTTGTTTTTTCTTGTTA+CGG + chr8_4:47105862-47105881 None:intergenic 20.0%
!! TATGATTATGATTATGAGTA+TGG + chr8_4:47106202-47106221 None:intergenic 20.0%
!!! GTTTTTTTCATATACTATCA+TGG - chr8_4:47107194-47107213 Msa1329020:intron 20.0%
!!! AATAAGTTGAAAACAACTTA+TGG - chr8_4:47107234-47107253 Msa1329020:intron 20.0%
!!! TTTGATTCGTTTAATTTGAA+TGG - chr8_4:47107388-47107407 Msa1329020:intron 20.0%
!!! TTTTGGAATTTTAATTGCTT+GGG - chr8_4:47107613-47107632 Msa1329020:intron 20.0%
!!! TTTTTACTACAATTGTTAGT+TGG - chr8_4:47107724-47107743 Msa1329020:intron 20.0%
!! TGAAACTTGGTTAATTATAA+TGG + chr8_4:47108529-47108548 None:intergenic 20.0%
!! TTGACAAAGATTGAAAAATA+AGG - chr8_4:47108591-47108610 Msa1329020:intron 20.0%
!! ATTATCATTTAATGGAAATG+TGG - chr8_4:47109121-47109140 Msa1329020:intron 20.0%
!! GCTGAAATATAATTATATGA+AGG + chr8_4:47109642-47109661 None:intergenic 20.0%
!!! TTTTATTACACTGTTGAATA+TGG - chr8_4:47110440-47110459 Msa1329020:CDS 20.0%
!! TGCTAACTATATGTTATAAT+GGG - chr8_4:47111634-47111653 Msa1329020:intron 20.0%
!!! GTTTTTATTTTGTTATAGTC+AGG - chr8_4:47111758-47111777 Msa1329020:intron 20.0%
!! TGCCCTTATAATTAATAAAA+AGG - chr8_4:47111919-47111938 Msa1329020:intron 20.0%
!!! AGATTTAATGTGTTTTGTTT+GGG + chr8_4:47112404-47112423 None:intergenic 20.0%
!! GTGTTAGAAATAATGTAAAT+AGG - chr8_4:47113168-47113187 Msa1329020:intron 20.0%
!!! TTTTCTTATTTCTCTCAATA+CGG - chr8_4:47113243-47113262 Msa1329020:intron 20.0%
!!! ATATTTATTCATTAGTCTAC+GGG + chr8_4:47113374-47113393 None:intergenic 20.0%
!! TATGCAAAATTGGAAAAATT+AGG + chr8_4:47113553-47113572 None:intergenic 20.0%
!! AGGAAATAATTATGCAAAAT+TGG + chr8_4:47113563-47113582 None:intergenic 20.0%
!! CACAAAACAAAAATTGAATT+AGG + chr8_4:47113583-47113602 None:intergenic 20.0%
!! TTTCAAAAAACTATAAGAGT+GGG + chr8_4:47113746-47113765 None:intergenic 20.0%
!!! TTTTCAAAAAACTATAAGAG+TGG + chr8_4:47113747-47113766 None:intergenic 20.0%
!! TGAAAAATAACCATAGAATA+AGG + chr8_4:47114967-47114986 None:intergenic 20.0%
!! TAATAAAATGGCAAATATCA+AGG - chr8_4:47115393-47115412 Msa1329020:five_prime_UTR 20.0%
!!! TGTTTGTTTTTTCTTGTTAC+GGG + chr8_4:47105861-47105880 None:intergenic 25.0%
!!! ATGAAATTGCTTCCATTTTT+GGG + chr8_4:47105989-47106008 None:intergenic 25.0%
!! TATGAAATTGCTTCCATTTT+TGG + chr8_4:47105990-47106009 None:intergenic 25.0%
! TATGATTATGAGTATGGTTA+TGG + chr8_4:47106196-47106215 None:intergenic 25.0%
!!! AGCTTTTGCAACTATTTTTA+TGG - chr8_4:47106699-47106718 Msa1329020:intron 25.0%
!!! GCTTTTGCAACTATTTTTAT+GGG - chr8_4:47106700-47106719 Msa1329020:intron 25.0%
!!! CTTTTGCAACTATTTTTATG+GGG - chr8_4:47106701-47106720 Msa1329020:intron 25.0%
! ATGTTTAATCTTGCACATAT+TGG - chr8_4:47106754-47106773 Msa1329020:CDS 25.0%
! AAATACATTATGGTCGTATT+TGG - chr8_4:47106797-47106816 Msa1329020:intron 25.0%
!!! TTCTAAGATAGAATCAATTC+CGG - chr8_4:47107002-47107021 Msa1329020:CDS 25.0%
!! TTTTCATATACTATCATGGA+CGG - chr8_4:47107198-47107217 Msa1329020:intron 25.0%
!! TCTTATTTGAGTTTATCTAC+AGG + chr8_4:47107319-47107338 None:intergenic 25.0%
!! ATTTGATTTCAAATACCAGA+GGG - chr8_4:47107529-47107548 Msa1329020:intron 25.0%
!!! GTTTTGGAATTTTAATTGCT+TGG - chr8_4:47107612-47107631 Msa1329020:intron 25.0%
!! GAAATCATTTCAACTTTTGA+TGG - chr8_4:47107746-47107765 Msa1329020:intron 25.0%
!!! AATTTTAGCCTTTGTTAAAG+TGG - chr8_4:47108099-47108118 Msa1329020:intron 25.0%
! AAACTTATCCACTTTAACAA+AGG + chr8_4:47108110-47108129 None:intergenic 25.0%
! GTGGATAAGTTTATTAATGT+TGG - chr8_4:47108118-47108137 Msa1329020:intron 25.0%
! GATAAGTTTATTAATGTTGG+TGG - chr8_4:47108121-47108140 Msa1329020:intron 25.0%
! AGAATGGCAATAATAGTATT+TGG - chr8_4:47108164-47108183 Msa1329020:intron 25.0%
! GAATGGCAATAATAGTATTT+GGG - chr8_4:47108165-47108184 Msa1329020:intron 25.0%
! AATGGCAATAATAGTATTTG+GGG - chr8_4:47108166-47108185 Msa1329020:intron 25.0%
! CAATATTAATAATGTGTCAG+TGG - chr8_4:47108280-47108299 Msa1329020:CDS 25.0%
!!! TATTATTTTAGGAGGATTAC+TGG - chr8_4:47108356-47108375 Msa1329020:CDS 25.0%
! AAAATGAAACTTCCAAACAT+AGG + chr8_4:47108569-47108588 None:intergenic 25.0%
! GTACAAAATTATTTCATCAC+AGG - chr8_4:47108784-47108803 Msa1329020:intron 25.0%
!!! AAAAGAATTTAAGAAGTACC+TGG + chr8_4:47109001-47109020 None:intergenic 25.0%
! ATTTGTAAACTAATCATCTG+TGG - chr8_4:47109062-47109081 Msa1329020:intron 25.0%
! TTTGTAAACTAATCATCTGT+GGG - chr8_4:47109063-47109082 Msa1329020:intron 25.0%
! AGTATAGTATTAATGAACTG+CGG + chr8_4:47109578-47109597 None:intergenic 25.0%
! AGTGTATTTAGATTAGATAC+TGG + chr8_4:47109819-47109838 None:intergenic 25.0%
! AAATTCGTGCTTATATTTCT+GGG - chr8_4:47110030-47110049 Msa1329020:intron 25.0%
! AAAACTTCACTTATCATTTG+TGG + chr8_4:47110216-47110235 None:intergenic 25.0%
! GAAATAAAGGGAAAAGAAAA+TGG + chr8_4:47110290-47110309 None:intergenic 25.0%
!!! AAAGAGATGATGGAAATAAA+GGG + chr8_4:47110302-47110321 None:intergenic 25.0%
!!! AAAAGAGATGATGGAAATAA+AGG + chr8_4:47110303-47110322 None:intergenic 25.0%
!! ACTGTTAATAATGCTTTGTT+TGG + chr8_4:47110337-47110356 None:intergenic 25.0%
! TATCAATAAGCTGAATTGAA+TGG - chr8_4:47110506-47110525 Msa1329020:CDS 25.0%
! AATTCTAAACTTCAGAAAGT+GGG + chr8_4:47110575-47110594 None:intergenic 25.0%
!!! TTCTGAAGTTTAGAATTGAA+TGG - chr8_4:47110578-47110597 Msa1329020:intron 25.0%
!! TTTTATCAAATGCAATGGTA+TGG + chr8_4:47110807-47110826 None:intergenic 25.0%
! CATCATTCATCTATTTATTG+AGG - chr8_4:47111082-47111101 Msa1329020:intron 25.0%
! ACATTCAAGATTGAATTGAA+TGG + chr8_4:47111216-47111235 None:intergenic 25.0%
!! TTTTCTGTAAAATGAATTGC+AGG - chr8_4:47111315-47111334 Msa1329020:intron 25.0%
! TTTCTGTAAAATGAATTGCA+GGG - chr8_4:47111316-47111335 Msa1329020:intron 25.0%
! AAGTGTACCATGAAAAAAAT+GGG + chr8_4:47111549-47111568 None:intergenic 25.0%
! AAAGTGTACCATGAAAAAAA+TGG + chr8_4:47111550-47111569 None:intergenic 25.0%
! GTGCTAACTATATGTTATAA+TGG - chr8_4:47111633-47111652 Msa1329020:intron 25.0%
! CTTATAACTGAATACTTCAT+AGG + chr8_4:47111661-47111680 None:intergenic 25.0%
! ATCTGAAGATGAATCAAAAA+AGG - chr8_4:47111847-47111866 Msa1329020:intron 25.0%
! TTTGATATGCTAAAAAACAG+AGG + chr8_4:47112226-47112245 None:intergenic 25.0%
!!! GAGATTTAATGTGTTTTGTT+TGG + chr8_4:47112405-47112424 None:intergenic 25.0%
!!! CACATCAATTTTTTTGCTTT+AGG + chr8_4:47112526-47112545 None:intergenic 25.0%
! CTAAAGCAAAAAAATTGATG+TGG - chr8_4:47112524-47112543 Msa1329020:intron 25.0%
!! TTGACCATGAATTCAAATTT+TGG + chr8_4:47112607-47112626 None:intergenic 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG + chr8_4:47112707-47112726 None:intergenic 25.0%
!! TTTCTTATTTCTCTCAATAC+GGG - chr8_4:47113244-47113263 Msa1329020:intron 25.0%
!! TTATTATTGTGGGTACTTTT+TGG - chr8_4:47113331-47113350 Msa1329020:CDS 25.0%
!!! TATTATTGTGGGTACTTTTT+GGG - chr8_4:47113332-47113351 Msa1329020:CDS 25.0%
! ATCTAACATAAAAACATACG+AGG + chr8_4:47113631-47113650 None:intergenic 25.0%
!!! GGGATTTTTTTTATCAACAA+CGG - chr8_4:47113850-47113869 Msa1329020:CDS 25.0%
! GCTTGATTTAATAACTTCAA+CGG + chr8_4:47113929-47113948 None:intergenic 25.0%
!!! AACAATATCGGTTTTACTTT+GGG + chr8_4:47114063-47114082 None:intergenic 25.0%
! AAAAAGGACGTCATTTAATT+CGG + chr8_4:47114145-47114164 None:intergenic 25.0%
!!! ACTGTTTTTACTTTTGTAAC+AGG - chr8_4:47114185-47114204 Msa1329020:intron 25.0%
!!! CTGTTTTTACTTTTGTAACA+GGG - chr8_4:47114186-47114205 Msa1329020:intron 25.0%
!!! TGTTTTTACTTTTGTAACAG+GGG - chr8_4:47114187-47114206 Msa1329020:intron 25.0%
! ATGTCTTCAAATTTCGTTTA+GGG + chr8_4:47114806-47114825 None:intergenic 25.0%
! TTCTTCAATTTACGAAAAAC+TGG + chr8_4:47114844-47114863 None:intergenic 25.0%
! CATGATATATTACAGTTGAT+TGG - chr8_4:47115105-47115124 Msa1329020:five_prime_UTR 25.0%
! GACGCTATCTTAAAATAATA+GGG + chr8_4:47115341-47115360 None:intergenic 25.0%
TGAGAGAATCAGAGTTTATT+AGG + chr8_4:47105911-47105930 None:intergenic 30.0%
AGAGAGGTTTGATAGAAATT+GGG + chr8_4:47106106-47106125 None:intergenic 30.0%
TAGAGAGGTTTGATAGAAAT+TGG + chr8_4:47106107-47106126 None:intergenic 30.0%
AACAACGAAGTTTATGATGA+TGG + chr8_4:47106151-47106170 None:intergenic 30.0%
AGTATGGTTATGGTTATGAT+CGG + chr8_4:47106186-47106205 None:intergenic 30.0%
!!! AAACTGATAATCGCTTTTTG+AGG + chr8_4:47106308-47106327 None:intergenic 30.0%
! AATTTGAAGTTGTTTGCGTT+TGG - chr8_4:47106899-47106918 Msa1329020:intron 30.0%
!! TGTAGCTTTGAGTTTAAACA+TGG + chr8_4:47106973-47106992 None:intergenic 30.0%
TTGATTCTATCTTAGAAGCT+AGG + chr8_4:47106999-47107018 None:intergenic 30.0%
CACTTAATTAAGCCTATGTT+AGG + chr8_4:47107114-47107133 None:intergenic 30.0%
TTTCATATACTATCATGGAC+GGG - chr8_4:47107199-47107218 Msa1329020:intron 30.0%
!! GCACTTAACTTGTTAAACTA+GGG + chr8_4:47107357-47107376 None:intergenic 30.0%
!! AGCACTTAACTTGTTAAACT+AGG + chr8_4:47107358-47107377 None:intergenic 30.0%
! CATTTGATTTCAAATACCAG+AGG - chr8_4:47107528-47107547 Msa1329020:intron 30.0%
GCAGATTATTGAAGTGTAAT+CGG - chr8_4:47107867-47107886 Msa1329020:intron 30.0%
TTATTGAAGTGTAATCGGAA+TGG - chr8_4:47107872-47107891 Msa1329020:intron 30.0%
AGATGGTAGAATAATTGTGA+AGG - chr8_4:47108032-47108051 Msa1329020:intron 30.0%
! GAATAATTGTGAAGGTATGT+TGG - chr8_4:47108040-47108059 Msa1329020:intron 30.0%
!! TTATTAATGTTGGTGGTATG+AGG - chr8_4:47108128-47108147 Msa1329020:intron 30.0%
GTCAAACTAGTGATGTTAAT+GGG - chr8_4:47108241-47108260 Msa1329020:CDS 30.0%
TATTAATAATGTGTCAGTGG+CGG - chr8_4:47108283-47108302 Msa1329020:CDS 30.0%
AAACTTCCAAACATAGGTAT+TGG + chr8_4:47108563-47108582 None:intergenic 30.0%
! TGTTTACAGTGCAATTTTGT+TGG - chr8_4:47108747-47108766 Msa1329020:intron 30.0%
! GTTTACAGTGCAATTTTGTT+GGG - chr8_4:47108748-47108767 Msa1329020:intron 30.0%
TGAATAGACCTAAACTTCAA+AGG - chr8_4:47108870-47108889 Msa1329020:intron 30.0%
TTCCTTTGTGATTCAGTATT+AGG + chr8_4:47109201-47109220 None:intergenic 30.0%
AATAATAAGTGGAGTGATTC+AGG + chr8_4:47109343-47109362 None:intergenic 30.0%
ATGAATGGGGAAATAATAAG+TGG + chr8_4:47109354-47109373 None:intergenic 30.0%
TCTTCATCCTTGTATAGATT+TGG - chr8_4:47109535-47109554 Msa1329020:intron 30.0%
CTTCATCCTTGTATAGATTT+GGG - chr8_4:47109536-47109555 Msa1329020:intron 30.0%
!!! AACTTATACCTTTTTTGCAC+AGG + chr8_4:47109787-47109806 None:intergenic 30.0%
! ACCATTTCATTCTAGCTAAA+GGG + chr8_4:47109905-47109924 None:intergenic 30.0%
! TACCATTTCATTCTAGCTAA+AGG + chr8_4:47109906-47109925 None:intergenic 30.0%
GAAATTCGTGCTTATATTTC+TGG - chr8_4:47110029-47110048 Msa1329020:intron 30.0%
ATAGTTCTCTCTTCAAATGT+AGG - chr8_4:47110090-47110109 Msa1329020:intron 30.0%
TAGGAAGAGAAAAGATAGAA+AGG - chr8_4:47110109-47110128 Msa1329020:intron 30.0%
ACTTATCATTTGTGGTTGAA+TGG + chr8_4:47110208-47110227 None:intergenic 30.0%
!! GTTTTAACCAAGTGTAAACT+TGG - chr8_4:47110355-47110374 Msa1329020:CDS 30.0%
! TACTGATTAAAGAAACGTTC+CGG - chr8_4:47110475-47110494 Msa1329020:CDS 30.0%
GCTTATTGATAGATCTATTC+CGG + chr8_4:47110497-47110516 None:intergenic 30.0%
ATTCTAAACTTCAGAAAGTG+GGG + chr8_4:47110574-47110593 None:intergenic 30.0%
CAATTCTAAACTTCAGAAAG+TGG + chr8_4:47110576-47110595 None:intergenic 30.0%
AAACACAAACTTCAGAAAGT+GGG + chr8_4:47110647-47110666 None:intergenic 30.0%
!! TTTCTGAAGTTTGTGTTTGT+CGG - chr8_4:47110649-47110668 Msa1329020:intron 30.0%
ATGGGATGTTTGTTTATTTG+TGG - chr8_4:47110709-47110728 Msa1329020:intron 30.0%
TGGGATGTTTGTTTATTTGT+GGG - chr8_4:47110710-47110729 Msa1329020:intron 30.0%
ACCATTGCATTTGATAAAAC+AGG - chr8_4:47110808-47110827 Msa1329020:intron 30.0%
CCATTGCATTTGATAAAACA+GGG - chr8_4:47110809-47110828 Msa1329020:intron 30.0%
TCAAAATGATACCTTCCAAT+GGG + chr8_4:47110991-47111010 None:intergenic 30.0%
TTCAAAATGATACCTTCCAA+TGG + chr8_4:47110992-47111011 None:intergenic 30.0%
! CTTTTGTATGTTTCTCGATT+TGG - chr8_4:47111128-47111147 Msa1329020:intron 30.0%
!! TATGTTTCTCGATTTGGTAT+TGG - chr8_4:47111134-47111153 Msa1329020:intron 30.0%
! AATTTTCAACAGAGACAGAA+GGG + chr8_4:47111373-47111392 None:intergenic 30.0%
! AAATTTTCAACAGAGACAGA+AGG + chr8_4:47111374-47111393 None:intergenic 30.0%
!! GAAAATTTTGAGTACTTTCC+TGG - chr8_4:47111386-47111405 Msa1329020:intron 30.0%
GTAGTGTAAACTATAATGCT+TGG + chr8_4:47111474-47111493 None:intergenic 30.0%
! ACTAACATTAGTTTCAGACT+CGG + chr8_4:47111615-47111634 None:intergenic 30.0%
ACAAGTAGAATGACTCAAAT+TGG - chr8_4:47111736-47111755 Msa1329020:intron 30.0%
AGATGAATCAAAAAAGGTCA+AGG - chr8_4:47111853-47111872 Msa1329020:intron 30.0%
GCTATTAATGCATCTTCTTA+TGG - chr8_4:47111878-47111897 Msa1329020:intron 30.0%
GTCATATACTTAGTCTCTTA+CGG - chr8_4:47111951-47111970 Msa1329020:intron 30.0%
!! AATTTTGATGGTTTGTACTC+TGG - chr8_4:47112091-47112110 Msa1329020:intron 30.0%
!! TCAAAAGCACCTATATTTGT+TGG - chr8_4:47112241-47112260 Msa1329020:intron 30.0%
!! CAAAAGCACCTATATTTGTT+GGG - chr8_4:47112242-47112261 Msa1329020:intron 30.0%
!! AAAAGCACCTATATTTGTTG+GGG - chr8_4:47112243-47112262 Msa1329020:intron 30.0%
CTGTAGAAGTTGAAAAACTT+TGG + chr8_4:47112335-47112354 None:intergenic 30.0%
! TTGTTATTGTTGTTGTGAAC+TGG - chr8_4:47112478-47112497 Msa1329020:CDS 30.0%
! TGTTATTGTTGTTGTGAACT+GGG - chr8_4:47112479-47112498 Msa1329020:CDS 30.0%
GAGACCAAAATTTGAATTCA+TGG - chr8_4:47112600-47112619 Msa1329020:intron 30.0%
! AACAGTAATTGAGACCTTTT+TGG - chr8_4:47112625-47112644 Msa1329020:intron 30.0%
AGCTTAACTGATTACCAAAA+AGG + chr8_4:47112642-47112661 None:intergenic 30.0%
AAAGGATATCTCAAGAGATA+TGG - chr8_4:47113069-47113088 Msa1329020:intron 30.0%
AAGGATATCTCAAGAGATAT+GGG - chr8_4:47113070-47113089 Msa1329020:intron 30.0%
! ATCTTTTGTCTCTGATAACA+TGG - chr8_4:47113121-47113140 Msa1329020:intron 30.0%
GGAAAAATTAGGATTGTAAG+AGG + chr8_4:47113542-47113561 None:intergenic 30.0%
GATTTAATAACTTCAACGGA+CGG + chr8_4:47113925-47113944 None:intergenic 30.0%
AAAACACGAAAAAGTCCAAA+AGG + chr8_4:47113970-47113989 None:intergenic 30.0%
!!! CAACAATATCGGTTTTACTT+TGG + chr8_4:47114064-47114083 None:intergenic 30.0%
CTAAGGTAGAACAACAATAT+CGG + chr8_4:47114075-47114094 None:intergenic 30.0%
AAAAGGACGTCATTTAATTC+GGG + chr8_4:47114144-47114163 None:intergenic 30.0%
TTGAGCACAAAACTGTAAAA+AGG + chr8_4:47114161-47114180 None:intergenic 30.0%
!! GTTTTTACTTTTGTAACAGG+GGG - chr8_4:47114188-47114207 Msa1329020:intron 30.0%
AGAAAAAAAAAATGTGGCTC+TGG - chr8_4:47114421-47114440 Msa1329020:intron 30.0%
! TACGTAATCTTTTCAGCAAT+TGG - chr8_4:47114460-47114479 Msa1329020:intron 30.0%
ATTTCTTCCATTGTGGATAA+CGG - chr8_4:47114581-47114600 Msa1329020:intron 30.0%
ATTCTGTTAACAAGGACAAA+TGG + chr8_4:47114677-47114696 None:intergenic 30.0%
TCACATTCATTCTGTTAACA+AGG + chr8_4:47114685-47114704 None:intergenic 30.0%
! TGTTCAAGTTATTCACTACA+TGG + chr8_4:47114748-47114767 None:intergenic 30.0%
TGTAAACACAGAAAAGAAGA+GGG + chr8_4:47114779-47114798 None:intergenic 30.0%
ATGTAAACACAGAAAAGAAG+AGG + chr8_4:47114780-47114799 None:intergenic 30.0%
GATGTCTTCAAATTTCGTTT+AGG + chr8_4:47114807-47114826 None:intergenic 30.0%
TATATTACAGTTGATTGGCA+AGG - chr8_4:47115110-47115129 Msa1329020:five_prime_UTR 30.0%
TGTTATATTTGTCCTAAGAG+AGG + chr8_4:47115151-47115170 None:intergenic 30.0%
TCTCTTAGGACAAATATAAC+AGG - chr8_4:47115150-47115169 Msa1329020:five_prime_UTR 30.0%
AGTAGAGAAATAGTGTATTG+CGG - chr8_4:47115224-47115243 Msa1329020:five_prime_UTR 30.0%
AATACCCCTTGTAAATGTAT+AGG - chr8_4:47115285-47115304 Msa1329020:five_prime_UTR 30.0%
AGATGCCTATACATTTACAA+GGG + chr8_4:47115293-47115312 None:intergenic 30.0%
AAGATGCCTATACATTTACA+AGG + chr8_4:47115294-47115313 None:intergenic 30.0%
GGACGCTATCTTAAAATAAT+AGG + chr8_4:47115342-47115361 None:intergenic 30.0%
ATTCCATTTGAAAGGCAAAA+CGG + chr8_4:47115374-47115393 None:intergenic 30.0%
AACAACTGCACCACAATAAA+AGG - chr8_4:47105877-47105896 Msa1329020:three_prime_UTR 35.0%
! GGACATATGACCTTTTATTG+TGG + chr8_4:47105890-47105909 None:intergenic 35.0%
CGAATTTCAACTCCCAAAAA+TGG - chr8_4:47105974-47105993 Msa1329020:three_prime_UTR 35.0%
GTGAATGGAATTTGGTAGAT+GGG + chr8_4:47106019-47106038 None:intergenic 35.0%
AGTGAATGGAATTTGGTAGA+TGG + chr8_4:47106020-47106039 None:intergenic 35.0%
GAGAGGTTTGATAGAAATTG+GGG + chr8_4:47106105-47106124 None:intergenic 35.0%
AGGAATTTGGAAGAATAGAG+AGG + chr8_4:47106122-47106141 None:intergenic 35.0%
! ATGATGGAGAATGAGGAATT+TGG + chr8_4:47106135-47106154 None:intergenic 35.0%
!! GTTTATGATGATGGAGAATG+AGG + chr8_4:47106142-47106161 None:intergenic 35.0%
! GATGATGATGATGATGATGA+TGG + chr8_4:47106244-47106263 None:intergenic 35.0%
ACAGGTTTGATGAGTGATTT+GGG + chr8_4:47106443-47106462 None:intergenic 35.0%
ACTTGATGTGTATCAGGTTT+CGG - chr8_4:47106609-47106628 Msa1329020:intron 35.0%
GATGCTCTAATTGAAATGAG+TGG - chr8_4:47106640-47106659 Msa1329020:intron 35.0%
!! TATTTTTATGGGGAACGCTT+TGG - chr8_4:47106711-47106730 Msa1329020:CDS 35.0%
TAAGATAGAATCAATTCCGG+AGG - chr8_4:47107005-47107024 Msa1329020:CDS 35.0%
! GTAGTCAAAATTGATTCTGG+AGG + chr8_4:47107078-47107097 None:intergenic 35.0%
! GGAGTAGTCAAAATTGATTC+TGG + chr8_4:47107081-47107100 None:intergenic 35.0%
!!! AATTTTGACTACTCCAAACG+TGG - chr8_4:47107086-47107105 Msa1329020:CDS 35.0%
GTTAAACTAGGGCATATGTT+TGG + chr8_4:47107346-47107365 None:intergenic 35.0%
GTATTTCACAAGTCGTTCAA+TGG - chr8_4:47107427-47107446 Msa1329020:intron 35.0%
! GGTTGATGTTAAAGAGTTGA+AGG - chr8_4:47107448-47107467 Msa1329020:intron 35.0%
TCAAGAACAAGTGCAAATTC+TGG + chr8_4:47107482-47107501 None:intergenic 35.0%
ATATGATTGCTTCCTTGTGT+TGG - chr8_4:47107671-47107690 Msa1329020:intron 35.0%
TATGATTGCTTCCTTGTGTT+GGG - chr8_4:47107672-47107691 Msa1329020:intron 35.0%
!!! TGGGTTTTGAGGTTTTCAAA+TGG - chr8_4:47107691-47107710 Msa1329020:intron 35.0%
!! TTTGAGGTTTTCAAATGGCT+AGG - chr8_4:47107696-47107715 Msa1329020:intron 35.0%
!! CATTTCAACTTTTGATGGCT+TGG - chr8_4:47107751-47107770 Msa1329020:intron 35.0%
TGGAAAACTTCACAATCTAC+AGG + chr8_4:47107916-47107935 None:intergenic 35.0%
! GTAGATTGTGAAGTTTTCCA+CGG - chr8_4:47107916-47107935 Msa1329020:intron 35.0%
!! TTGTGATGGATGAAACAGTT+AGG - chr8_4:47108210-47108229 Msa1329020:intron 35.0%
ATGAAACAGTTAGGAGAAGA+AGG - chr8_4:47108219-47108238 Msa1329020:intron 35.0%
GGTCAAACTAGTGATGTTAA+TGG - chr8_4:47108240-47108259 Msa1329020:CDS 35.0%
AAACTAGTGATGTTAATGGG+TGG - chr8_4:47108244-47108263 Msa1329020:CDS 35.0%
! AACTAGTGATGTTAATGGGT+GGG - chr8_4:47108245-47108264 Msa1329020:CDS 35.0%
!! TGTGTAAATCGTTAGTTCTG+AGG - chr8_4:47108387-47108406 Msa1329020:CDS 35.0%
!! GAATTGCTGTATGTTTTTGC+TGG - chr8_4:47108476-47108495 Msa1329020:intron 35.0%
AACTTATCCTTAGACATGCT+TGG + chr8_4:47108631-47108650 None:intergenic 35.0%
TTGCTAGAGATTGTAATGCT+AGG - chr8_4:47108649-47108668 Msa1329020:intron 35.0%
! CATTGCTGACAGTCTAAAAT+TGG + chr8_4:47108678-47108697 None:intergenic 35.0%
ATAGACCTAAACTTCAAAGG+TGG - chr8_4:47108873-47108892 Msa1329020:intron 35.0%
! TCAATTGCTATTGCTGTTCT+TGG - chr8_4:47108941-47108960 Msa1329020:intron 35.0%
TTGGTCCACTTGTATTTAAG+TGG - chr8_4:47108960-47108979 Msa1329020:intron 35.0%
AATGGCCACTTAAATACAAG+TGG + chr8_4:47108968-47108987 None:intergenic 35.0%
TGTGATTCAGTATTAGGAGA+GGG + chr8_4:47109195-47109214 None:intergenic 35.0%
TTGTGATTCAGTATTAGGAG+AGG + chr8_4:47109196-47109215 None:intergenic 35.0%
CTCCTAATACTGAATCACAA+AGG - chr8_4:47109196-47109215 Msa1329020:intron 35.0%
! TAGAGAAATGGTGAGGTTTT+GGG + chr8_4:47109292-47109311 None:intergenic 35.0%
! ATAGAGAAATGGTGAGGTTT+TGG + chr8_4:47109293-47109312 None:intergenic 35.0%
GAAAGAATAGAGAAATGGTG+AGG + chr8_4:47109299-47109318 None:intergenic 35.0%
CAGTGAGCACTATATAAAGT+TGG + chr8_4:47109614-47109633 None:intergenic 35.0%
GGGCTAACAAAAATTCAAAG+CGG + chr8_4:47109885-47109904 None:intergenic 35.0%
TACTTCACAACTTAAACACC+AGG + chr8_4:47109930-47109949 None:intergenic 35.0%
AAGAACACAAACTGTACAGA+TGG + chr8_4:47109959-47109978 None:intergenic 35.0%
TGGGTTTATCAGTTTAGTTG+AGG - chr8_4:47110049-47110068 Msa1329020:intron 35.0%
ATCAGTTTAGTTGAGGAAAG+CGG - chr8_4:47110056-47110075 Msa1329020:intron 35.0%
AAGAATACATGTTTGCATGC+AGG + chr8_4:47110257-47110276 None:intergenic 35.0%
GCAGAAAGAAAAAGAGATGA+TGG + chr8_4:47110312-47110331 None:intergenic 35.0%
TCAGTTTCCAAGTTTACACT+TGG + chr8_4:47110365-47110384 None:intergenic 35.0%
AACACAAACTTCAGAAAGTG+GGG + chr8_4:47110646-47110665 None:intergenic 35.0%
CAAACACAAACTTCAGAAAG+TGG + chr8_4:47110648-47110667 None:intergenic 35.0%
! CCCTGTTTTATCAAATGCAA+TGG + chr8_4:47110812-47110831 None:intergenic 35.0%
CAAAATGATACCTTCCAATG+GGG + chr8_4:47110990-47111009 None:intergenic 35.0%
! GATTTGGTATTGGACTATTG+TGG - chr8_4:47111144-47111163 Msa1329020:intron 35.0%
CTCAAAATACTGACAATGCA+TGG + chr8_4:47111496-47111515 None:intergenic 35.0%
CCAAGAGAAATGTATGCAAT+AGG + chr8_4:47111521-47111540 None:intergenic 35.0%
CCTATTGCATACATTTCTCT+TGG - chr8_4:47111518-47111537 Msa1329020:CDS 35.0%
!!! GGAGAATCCCATTTTTTTCA+TGG - chr8_4:47111539-47111558 Msa1329020:CDS 35.0%
!! ATTTTGTTATAGTCAGGAGC+TGG - chr8_4:47111764-47111783 Msa1329020:intron 35.0%
!! AACCTATTGAAAGCATCACT+TGG - chr8_4:47111794-47111813 Msa1329020:intron 35.0%
!! ACCTATTGAAAGCATCACTT+GGG - chr8_4:47111795-47111814 Msa1329020:intron 35.0%
TAAACAGAACAGTACAAGAC+AGG - chr8_4:47112003-47112022 Msa1329020:intron 35.0%
AAACAGAACAGTACAAGACA+GGG - chr8_4:47112004-47112023 Msa1329020:intron 35.0%
!! GCGTACTTTGGTAATTTTGA+TGG - chr8_4:47112079-47112098 Msa1329020:intron 35.0%
TATGCTAAAAAACAGAGGAC+TGG + chr8_4:47112221-47112240 None:intergenic 35.0%
!! ATATCTCCAGCTTTAGAAGT+TGG - chr8_4:47112302-47112321 Msa1329020:intron 35.0%
!!! ATGTGTTTTGTTTGGGAAGA+GGG + chr8_4:47112397-47112416 None:intergenic 35.0%
!!! AATGTGTTTTGTTTGGGAAG+AGG + chr8_4:47112398-47112417 None:intergenic 35.0%
TTTAGGCCTCTTAATCTGTT+AGG + chr8_4:47112509-47112528 None:intergenic 35.0%
!! GCTTTAGGTCGCAAAATTTT+AGG + chr8_4:47112739-47112758 None:intergenic 35.0%
! CTTGTCAACATTTTCCTTCT+GGG - chr8_4:47112826-47112845 Msa1329020:intron 35.0%
TGAATAACATCAAAAACCCC+TGG + chr8_4:47112911-47112930 None:intergenic 35.0%
AGATAAGTTGCGTCATGTAA+AGG - chr8_4:47113051-47113070 Msa1329020:intron 35.0%
TCCATAATTCATGTCATACC+CGG - chr8_4:47113270-47113289 Msa1329020:CDS 35.0%
AGGTACTTAACCATAAGTAC+CGG + chr8_4:47113292-47113311 None:intergenic 35.0%
AACAACGGTGACACTTATAA+TGG - chr8_4:47113865-47113884 Msa1329020:CDS 35.0%
TAAGACAACAGAGTCAACTA+AGG + chr8_4:47114092-47114111 None:intergenic 35.0%
CATTCTGTATTGCCAAATCT+CGG - chr8_4:47114357-47114376 Msa1329020:intron 35.0%
GATTAAGCAAAATGTAGCTC+TGG - chr8_4:47114515-47114534 Msa1329020:intron 35.0%
!!! TTTTGGGATTTCTTCCATTG+TGG - chr8_4:47114574-47114593 Msa1329020:intron 35.0%
CGATCTTGTTACTATTTGTC+AGG - chr8_4:47114630-47114649 Msa1329020:intron 35.0%
GTAAACACAGAAAAGAAGAG+GGG + chr8_4:47114778-47114797 None:intergenic 35.0%
TTCTCTCGAACCTTATTCTA+TGG - chr8_4:47114954-47114973 Msa1329020:five_prime_UTR 35.0%
TCAATATGTAACATGCATGC+AGG - chr8_4:47115002-47115021 Msa1329020:five_prime_UTR 35.0%
TGGTTCATTTAAACCACGTA+TGG + chr8_4:47115070-47115089 None:intergenic 35.0%
CTGTAATATATCATGCTTCC+AGG + chr8_4:47115100-47115119 None:intergenic 35.0%
GATGCCTATACATTTACAAG+GGG + chr8_4:47115292-47115311 None:intergenic 35.0%
!! TCTTTTTCGTCCCAAAGTAT+TGG - chr8_4:47115310-47115329 Msa1329020:five_prime_UTR 35.0%
TAGGGAATGTCCAATACTTT+GGG + chr8_4:47115323-47115342 None:intergenic 35.0%
ATAGGGAATGTCCAATACTT+TGG + chr8_4:47115324-47115343 None:intergenic 35.0%
TTCCATTTGAAAGGCAAAAC+GGG + chr8_4:47115373-47115392 None:intergenic 35.0%
GGTGTGAAGTGAATGGAATT+TGG + chr8_4:47106027-47106046 None:intergenic 40.0%
! GATCCTTGTGGTTTTTGTGT+GGG + chr8_4:47106048-47106067 None:intergenic 40.0%
! TGATCCTTGTGGTTTTTGTG+TGG + chr8_4:47106049-47106068 None:intergenic 40.0%
GTTAGAGGATTTGATCCTTG+TGG + chr8_4:47106060-47106079 None:intergenic 40.0%
AATAGGAAAAGCGAGGTTAG+AGG + chr8_4:47106075-47106094 None:intergenic 40.0%
GTTATGATCGGTGTGATTTG+CGG + chr8_4:47106174-47106193 None:intergenic 40.0%
! GTCAATCCATTTGGTAGCTT+TGG + chr8_4:47106333-47106352 None:intergenic 40.0%
ATTCGCTAGGTCAATCCATT+TGG + chr8_4:47106342-47106361 None:intergenic 40.0%
! TGATTTGGGCAAAGTATGAG+GGG + chr8_4:47106429-47106448 None:intergenic 40.0%
! GTGATTTGGGCAAAGTATGA+GGG + chr8_4:47106430-47106449 None:intergenic 40.0%
! AGTGATTTGGGCAAAGTATG+AGG + chr8_4:47106431-47106450 None:intergenic 40.0%
GACAGGTTTGATGAGTGATT+TGG + chr8_4:47106444-47106463 None:intergenic 40.0%
!!! AGAATGAACGAGTTTTGGAC+AGG + chr8_4:47106461-47106480 None:intergenic 40.0%
TGTCCAAAACTCGTTCATTC+TGG - chr8_4:47106460-47106479 Msa1329020:intron 40.0%
TAGTTTCTTACCCCAACCAA+CGG + chr8_4:47106494-47106513 None:intergenic 40.0%
ATGCTCACTTGATGTGTATC+AGG - chr8_4:47106603-47106622 Msa1329020:intron 40.0%
GCTCTAATTGAAATGAGTGG+TGG - chr8_4:47106643-47106662 Msa1329020:intron 40.0%
AGTGAGCATCCATGTGTTAA+TGG - chr8_4:47106669-47106688 Msa1329020:intron 40.0%
CATCCATGTGTTAATGGCAA+TGG - chr8_4:47106675-47106694 Msa1329020:intron 40.0%
!!! AGTGGCATTGATTTTTCCTC+CGG + chr8_4:47107024-47107043 None:intergenic 40.0%
TTGACATGTTTGTTCTCGAG+TGG + chr8_4:47107042-47107061 None:intergenic 40.0%
GCTTGGGAGAGTTTATTTAC+AGG + chr8_4:47107279-47107298 None:intergenic 40.0%
ATGATCCCACAGTTATATCG+TGG + chr8_4:47107562-47107581 None:intergenic 40.0%
!! TCCAAAACTTGTTACCTCTC+CGG + chr8_4:47107600-47107619 None:intergenic 40.0%
AAACCTCAAAACCCAACACA+AGG + chr8_4:47107686-47107705 None:intergenic 40.0%
CAAGTGCTCAATGGTAATTG+TGG + chr8_4:47107947-47107966 None:intergenic 40.0%
ATTACCATTGAGCACTTGAC+AGG - chr8_4:47107949-47107968 Msa1329020:intron 40.0%
TTACCATTGAGCACTTGACA+GGG - chr8_4:47107950-47107969 Msa1329020:intron 40.0%
AGGAACTCTATCTCCAACTT+TGG + chr8_4:47107995-47108014 None:intergenic 40.0%
AAAGTTGGAGATAGAGTTCC+TGG - chr8_4:47107994-47108013 Msa1329020:intron 40.0%
TAGTACAGCAAGAGCTGAAA+TGG + chr8_4:47108066-47108085 None:intergenic 40.0%
AGGAAGTGGAACAGAAAGAA+TGG - chr8_4:47108148-47108167 Msa1329020:intron 40.0%
! TATTTGGGGTTTGTGTACCA+TGG - chr8_4:47108180-47108199 Msa1329020:intron 40.0%
ACCATGGTGACTAATTGTGA+TGG - chr8_4:47108196-47108215 Msa1329020:intron 40.0%
TCCATCACAATTAGTCACCA+TGG + chr8_4:47108200-47108219 None:intergenic 40.0%
CAAGCTTCAGAAGAGTAACA+AGG + chr8_4:47108324-47108343 None:intergenic 40.0%
!! CTTGTTACTCTTCTGAAGCT+TGG - chr8_4:47108322-47108341 Msa1329020:CDS 40.0%
GTGATTGAGATGAATGGAGT+TGG - chr8_4:47108419-47108438 Msa1329020:intron 40.0%
CACTGACCAATACCTATGTT+TGG - chr8_4:47108554-47108573 Msa1329020:intron 40.0%
TCAAGTTCCAAGCATGTCTA+AGG - chr8_4:47108621-47108640 Msa1329020:intron 40.0%
CATCACAGGTAACAAAGACA+TGG - chr8_4:47108798-47108817 Msa1329020:intron 40.0%
ACAGGTAACAAAGACATGGA+AGG - chr8_4:47108802-47108821 Msa1329020:intron 40.0%
GTACCTGGTGTACTAAAGAA+TGG + chr8_4:47108986-47109005 None:intergenic 40.0%
GGTGGGAAAGAATAGAGAAA+TGG + chr8_4:47109304-47109323 None:intergenic 40.0%
!! GCACACAAGATAGTATTGGT+GGG + chr8_4:47109321-47109340 None:intergenic 40.0%
TCAGGCACACAAGATAGTAT+TGG + chr8_4:47109325-47109344 None:intergenic 40.0%
AAGGACTGTGTATGTATGCA+AGG + chr8_4:47109479-47109498 None:intergenic 40.0%
AACAAGAGCTATGCTCAAGT+AGG + chr8_4:47109515-47109534 None:intergenic 40.0%
TCCTTGTATAGATTTGGGCA+AGG - chr8_4:47109541-47109560 Msa1329020:intron 40.0%
CCTTGTATAGATTTGGGCAA+GGG - chr8_4:47109542-47109561 Msa1329020:intron 40.0%
TAATGAACTGCGGAAGTCAA+GGG + chr8_4:47109568-47109587 None:intergenic 40.0%
TTAATGAACTGCGGAAGTCA+AGG + chr8_4:47109569-47109588 None:intergenic 40.0%
GTTCTATCTACAGAGCCTTA+GGG - chr8_4:47109694-47109713 Msa1329020:intron 40.0%
AATCAGCTCCTGTGCAAAAA+AGG - chr8_4:47109776-47109795 Msa1329020:intron 40.0%
GCCCTTTAGCTAGAATGAAA+TGG - chr8_4:47109901-47109920 Msa1329020:CDS 40.0%
GCTAGAATGAAATGGTATCC+TGG - chr8_4:47109909-47109928 Msa1329020:CDS 40.0%
TCAGTTTAGTTGAGGAAAGC+GGG - chr8_4:47110057-47110076 Msa1329020:intron 40.0%
ATGCAGGTAAGAGGAAAGAA+AGG + chr8_4:47110241-47110260 None:intergenic 40.0%
TTGCAGGGCATATTACTCAA+AGG - chr8_4:47110751-47110770 Msa1329020:intron 40.0%
! AAAACAGGGACATTGACTAC+TGG - chr8_4:47110823-47110842 Msa1329020:intron 40.0%
!! TACTGGTGGACTTGTATTCA+AGG - chr8_4:47110840-47110859 Msa1329020:intron 40.0%
AAGGCAATTGAGCCTGTTTA+CGG - chr8_4:47110859-47110878 Msa1329020:intron 40.0%
GTAACAATTGTGGCTGTCAT+TGG - chr8_4:47111052-47111071 Msa1329020:intron 40.0%
ATATAGCACGAACTGCAACA+TGG - chr8_4:47111262-47111281 Msa1329020:intron 40.0%
TAAAATGAATTGCAGGGCTG+TGG - chr8_4:47111322-47111341 Msa1329020:intron 40.0%
CTGTGGTTGAACATAGTGAA+GGG - chr8_4:47111339-47111358 Msa1329020:intron 40.0%
TTTGAGTACTTTCCTGGTAG+AGG - chr8_4:47111392-47111411 Msa1329020:intron 40.0%
TGCTGTTAACAGTAGCAGTA+AGG + chr8_4:47111418-47111437 None:intergenic 40.0%
TGCTACTGTTAACAGCATTG+AGG - chr8_4:47111421-47111440 Msa1329020:intron 40.0%
ACCCAAGTGATGCTTTCAAT+AGG + chr8_4:47111799-47111818 None:intergenic 40.0%
! GGAACATGAAAAGCGTACTT+TGG - chr8_4:47112067-47112086 Msa1329020:intron 40.0%
CTTGTCTCACTGTTTAGTGA+AGG - chr8_4:47112121-47112140 Msa1329020:intron 40.0%
ATTCCTGCCCCAACAAATAT+AGG + chr8_4:47112253-47112272 None:intergenic 40.0%
!! ATGAAGCCAACTTCTAAAGC+TGG + chr8_4:47112311-47112330 None:intergenic 40.0%
!!! TGTGTTTTGTTTGGGAAGAG+GGG + chr8_4:47112396-47112415 None:intergenic 40.0%
AGAGATGATGTTCACAACCA+GGG + chr8_4:47112793-47112812 None:intergenic 40.0%
CCAGAAGGAAAATGTTGACA+AGG + chr8_4:47112828-47112847 None:intergenic 40.0%
! CCTTGTCAACATTTTCCTTC+TGG - chr8_4:47112825-47112844 Msa1329020:intron 40.0%
! CATCAAGTGGTTAGTCAGTA+AGG + chr8_4:47112852-47112871 None:intergenic 40.0%
! TTCCGTGTGATGATGTTAAC+TGG - chr8_4:47112953-47112972 Msa1329020:intron 40.0%
CACCAGTTAACATCATCACA+CGG + chr8_4:47112958-47112977 None:intergenic 40.0%
ACATGACGCAACTTATCTTC+AGG + chr8_4:47113049-47113068 None:intergenic 40.0%
ACCGGGTATGACATGAATTA+TGG + chr8_4:47113274-47113293 None:intergenic 40.0%
GGTACTTAACCATAAGTACC+GGG + chr8_4:47113291-47113310 None:intergenic 40.0%
!!! GGGTACTTTTTGGGTAAGTA+CGG - chr8_4:47113341-47113360 Msa1329020:CDS 40.0%
!!! GGTACTTTTTGGGTAAGTAC+GGG - chr8_4:47113342-47113361 Msa1329020:CDS 40.0%
! CTTTTGTAGCGACACACTAT+TGG - chr8_4:47113990-47114009 Msa1329020:intron 40.0%
TGCATGAACCTACACTGAAA+CGG + chr8_4:47114017-47114036 None:intergenic 40.0%
TTTCAGTGTAGGTTCATGCA+GGG - chr8_4:47114017-47114036 Msa1329020:intron 40.0%
!! TTTACTTTTGTAACAGGGGG+AGG - chr8_4:47114191-47114210 Msa1329020:intron 40.0%
!! GGCTTAATTATGGTTGGTGA+AGG - chr8_4:47114212-47114231 Msa1329020:intron 40.0%
CGAGATTTGGCAATACAGAA+TGG + chr8_4:47114359-47114378 None:intergenic 40.0%
GGCATTGTCTAGCATATTCT+TGG - chr8_4:47114536-47114555 Msa1329020:intron 40.0%
AAATCCCAAAACTGACGGAA+GGG + chr8_4:47114565-47114584 None:intergenic 40.0%
GGAAGAAATCCCAAAACTGA+CGG + chr8_4:47114570-47114589 None:intergenic 40.0%
TGTCATACCGTTATCCACAA+TGG + chr8_4:47114591-47114610 None:intergenic 40.0%
TTACTATTTGTCAGGCTGTC+AGG - chr8_4:47114638-47114657 Msa1329020:intron 40.0%
GAGCTTGAGGATATTTACTG+AGG + chr8_4:47114923-47114942 None:intergenic 40.0%
CAGTAAATATCCTCAAGCTC+TGG - chr8_4:47114923-47114942 Msa1329020:exon 40.0%
ATGCAGGTTCTCTTACATGA+AGG - chr8_4:47115018-47115037 Msa1329020:five_prime_UTR 40.0%
GTGGTTTAAATGAACCATCC+TGG - chr8_4:47115073-47115092 Msa1329020:five_prime_UTR 40.0%
AATCTAGACTCTCCTCTCTT+AGG - chr8_4:47115136-47115155 Msa1329020:five_prime_UTR 40.0%
CTACACACATCACAAATTCG+CGG + chr8_4:47115193-47115212 None:intergenic 40.0%
TCCATTTGAAAGGCAAAACG+GGG + chr8_4:47115372-47115391 None:intergenic 40.0%
! CTTCTCGTGCTGTTATAACA+GGG + chr8_4:47115439-47115458 None:intergenic 40.0%
! ACTTCTCGTGCTGTTATAAC+AGG + chr8_4:47115440-47115459 None:intergenic 40.0%
TGTTATAACAGCACGAGAAG+TGG - chr8_4:47115439-47115458 Msa1329020:five_prime_UTR 40.0%
CTTGTTACGGGTCATTACAG+TGG + chr8_4:47105849-47105868 None:intergenic 45.0%
TTGTGTGGGTGTGAAGTGAA+TGG + chr8_4:47106034-47106053 None:intergenic 45.0%
ACACCCACACAAAAACCACA+AGG - chr8_4:47106042-47106061 Msa1329020:three_prime_UTR 45.0%
ATGTGCGAATAGGAAAAGCG+AGG + chr8_4:47106082-47106101 None:intergenic 45.0%
GAAATTGGGGATGTGCGAAT+AGG + chr8_4:47106092-47106111 None:intergenic 45.0%
ATCGATGATGCGAATCTCAC+TGG - chr8_4:47106281-47106300 Msa1329020:intron 45.0%
GTTTCGCCAAAGCTACCAAA+TGG - chr8_4:47106324-47106343 Msa1329020:intron 45.0%
GCTCTCTCAAGAAATTCGCT+AGG + chr8_4:47106355-47106374 None:intergenic 45.0%
! CGACCAGAATGAACGAGTTT+TGG + chr8_4:47106466-47106485 None:intergenic 45.0%
CTGCCATTGCCATTAACACA+TGG + chr8_4:47106681-47106700 None:intergenic 45.0%
! TTTATGGGGAACGCTTTGGA+AGG - chr8_4:47106715-47106734 Msa1329020:CDS 45.0%
CCTATGTTAGGTTCCACGTT+TGG + chr8_4:47107102-47107121 None:intergenic 45.0%
CCAAACGTGGAACCTAACAT+AGG - chr8_4:47107099-47107118 Msa1329020:intron 45.0%
ATCATGGACGGGAGAGTTAA+TGG - chr8_4:47107210-47107229 Msa1329020:intron 45.0%
TAAACTCTCCCAAGCAGTCT+CGG - chr8_4:47107284-47107303 Msa1329020:intron 45.0%
ATAAGTACCCGAGACTGCTT+GGG + chr8_4:47107295-47107314 None:intergenic 45.0%
TATAAGTACCCGAGACTGCT+TGG + chr8_4:47107296-47107315 None:intergenic 45.0%
TCCTGTCCACGATATAACTG+TGG - chr8_4:47107553-47107572 Msa1329020:intron 45.0%
CCTGTCCACGATATAACTGT+GGG - chr8_4:47107554-47107573 Msa1329020:intron 45.0%
GTGGGATCATATGTCCTTGT+TGG - chr8_4:47107572-47107591 Msa1329020:intron 45.0%
TCATATGTCCTTGTTGGTGC+CGG - chr8_4:47107578-47107597 Msa1329020:intron 45.0%
! CTTCCTTGTGTTGGGTTTTG+AGG - chr8_4:47107680-47107699 Msa1329020:intron 45.0%
TTGCAATCCACAAATGCCAC+GGG + chr8_4:47107787-47107806 None:intergenic 45.0%
GTTGCAATCCACAAATGCCA+CGG + chr8_4:47107788-47107807 None:intergenic 45.0%
! GATTGTGAAGTTTTCCACGG+CGG - chr8_4:47107919-47107938 Msa1329020:intron 45.0%
TACCATTGAGCACTTGACAG+GGG - chr8_4:47107951-47107970 Msa1329020:intron 45.0%
!! ATGTTGGTGGTATGAGGAAG+TGG - chr8_4:47108134-47108153 Msa1329020:intron 45.0%
!! ATCGTTAGTTCTGAGGTTGC+TGG - chr8_4:47108394-47108413 Msa1329020:CDS 45.0%
! CTGGTGGTGATTGAGATGAA+TGG - chr8_4:47108413-47108432 Msa1329020:CDS 45.0%
GAGATGAATGGAGTTGGAGT+TGG - chr8_4:47108425-47108444 Msa1329020:intron 45.0%
!! AATGGAGTTGGAGTTGGTGT+TGG - chr8_4:47108431-47108450 Msa1329020:intron 45.0%
GGTCAGTGTCATGTGAAACT+TGG + chr8_4:47108542-47108561 None:intergenic 45.0%
ACCTAAACTTCAAAGGTGGC+TGG - chr8_4:47108877-47108896 Msa1329020:intron 45.0%
!! TCCAGCCACCTTTGAAGTTT+AGG + chr8_4:47108881-47108900 None:intergenic 45.0%
CAAAGGTGGCTGGATGAATT+TGG - chr8_4:47108887-47108906 Msa1329020:intron 45.0%
GCGTTACAGCAAAGTTGTTG+TGG - chr8_4:47108913-47108932 Msa1329020:intron 45.0%
TGGCCATTCTTTAGTACACC+AGG - chr8_4:47108980-47108999 Msa1329020:intron 45.0%
GAGGGAAATCTCTGCTTGTA+AGG + chr8_4:47109177-47109196 None:intergenic 45.0%
! GGCACACAAGATAGTATTGG+TGG + chr8_4:47109322-47109341 None:intergenic 45.0%
ACAGCTGGTGCAGTATGAAT+GGG + chr8_4:47109368-47109387 None:intergenic 45.0%
AACAGCTGGTGCAGTATGAA+TGG + chr8_4:47109369-47109388 None:intergenic 45.0%
TTGTTAACAGCCTGAACAGC+TGG + chr8_4:47109383-47109402 None:intergenic 45.0%
ACCCTGCAATTCCTCTCTTA+TGG - chr8_4:47109451-47109470 Msa1329020:CDS 45.0%
GCCATAAGAGAGGAATTGCA+GGG + chr8_4:47109455-47109474 None:intergenic 45.0%
AGCCATAAGAGAGGAATTGC+AGG + chr8_4:47109456-47109475 None:intergenic 45.0%
TATGCAAGGAGCCATAAGAG+AGG + chr8_4:47109465-47109484 None:intergenic 45.0%
CCCTTGCCCAAATCTATACA+AGG + chr8_4:47109545-47109564 None:intergenic 45.0%
TTTGTTGATGCAGCTTGCAG+AGG - chr8_4:47109672-47109691 Msa1329020:intron 45.0%
GGTTCTATCTACAGAGCCTT+AGG - chr8_4:47109693-47109712 Msa1329020:intron 45.0%
ATTGCTGTGGCATATGCCAA+TGG + chr8_4:47109759-47109778 None:intergenic 45.0%
GCACGAATTTCAGAAGATGC+TGG + chr8_4:47110020-47110039 None:intergenic 45.0%
CATGTTTGCATGCAGGTAAG+AGG + chr8_4:47110250-47110269 None:intergenic 45.0%
TGACAGTTACCTCAACTTGC+AGG - chr8_4:47110735-47110754 Msa1329020:intron 45.0%
GACAGTTACCTCAACTTGCA+GGG - chr8_4:47110736-47110755 Msa1329020:intron 45.0%
GTAATATGCCCTGCAAGTTG+AGG + chr8_4:47110747-47110766 None:intergenic 45.0%
CAGGGCATATTACTCAAAGG+TGG - chr8_4:47110754-47110773 Msa1329020:intron 45.0%
ACTCAAAGGTGGACATGTTC+TGG - chr8_4:47110765-47110784 Msa1329020:intron 45.0%
CTAATGCGATGACCGTAAAC+AGG + chr8_4:47110874-47110893 None:intergenic 45.0%
CGGTCATCGCATTAGAAACA+AGG - chr8_4:47110879-47110898 Msa1329020:intron 45.0%
TTGCATTCCCACCTGTGAAA+AGG - chr8_4:47110921-47110940 Msa1329020:intron 45.0%
! AGAGCTTCCTTTTCACAGGT+GGG + chr8_4:47110931-47110950 None:intergenic 45.0%
! AAGAGCTTCCTTTTCACAGG+TGG + chr8_4:47110932-47110951 None:intergenic 45.0%
! AGCAAGAGCTTCCTTTTCAC+AGG + chr8_4:47110935-47110954 None:intergenic 45.0%
!! AAAGGAAGCTCTTGCTGTTG+CGG - chr8_4:47110939-47110958 Msa1329020:intron 45.0%
ATGATACCTTCCAATGGGGT+GGG + chr8_4:47110986-47111005 None:intergenic 45.0%
AATGATACCTTCCAATGGGG+TGG + chr8_4:47110987-47111006 None:intergenic 45.0%
GCTGTGGTTGAACATAGTGA+AGG - chr8_4:47111338-47111357 Msa1329020:intron 45.0%
TTTCAACAGAGACAGAAGGG+AGG + chr8_4:47111370-47111389 None:intergenic 45.0%
TTGTCAAGCACGCAATAGTC+AGG + chr8_4:47111449-47111468 None:intergenic 45.0%
TTGTTATAGTCAGGAGCTGG+AGG - chr8_4:47111767-47111786 Msa1329020:intron 45.0%
! TTAGTGGGATAAGGCTTGGT+TGG - chr8_4:47112450-47112469 Msa1329020:CDS 45.0%
! ATTGTTGTTGTGAACTGGGC+CGG - chr8_4:47112483-47112502 Msa1329020:CDS 45.0%
CAGAGATGATGTTCACAACC+AGG + chr8_4:47112794-47112813 None:intergenic 45.0%
ACTGACTAACCACTTGATGC+AGG - chr8_4:47112853-47112872 Msa1329020:intron 45.0%
! AAAGAGAGTTGCAAGTGCTG+TGG - chr8_4:47112994-47113013 Msa1329020:intron 45.0%
! AAGAGAGTTGCAAGTGCTGT+GGG - chr8_4:47112995-47113014 Msa1329020:intron 45.0%
GCAACTTATCTTCAGGCTTC+AGG + chr8_4:47113042-47113061 None:intergenic 45.0%
CATGTCATACCCGGTACTTA+TGG - chr8_4:47113279-47113298 Msa1329020:CDS 45.0%
CTATTGGTCCGTTTCAGTGT+AGG - chr8_4:47114006-47114025 Msa1329020:intron 45.0%
GTTTCAGTGTAGGTTCATGC+AGG - chr8_4:47114016-47114035 Msa1329020:intron 45.0%
AACAGGGGGAGGCTTAATTA+TGG - chr8_4:47114202-47114221 Msa1329020:intron 45.0%
TGAAGTTGTCTGCCGAGATT+TGG + chr8_4:47114372-47114391 None:intergenic 45.0%
GAAATCCCAAAACTGACGGA+AGG + chr8_4:47114566-47114585 None:intergenic 45.0%
! AAATATCCTCAAGCTCTGGC+TGG - chr8_4:47114927-47114946 Msa1329020:exon 45.0%
CAGGTTCTCTTACATGAAGG+CGG - chr8_4:47115021-47115040 Msa1329020:five_prime_UTR 45.0%
GGAGTTGAGACAAACAAGCA+AGG + chr8_4:47115049-47115068 None:intergenic 45.0%
GTTTGTCTCAACTCCATACG+TGG - chr8_4:47115054-47115073 Msa1329020:five_prime_UTR 45.0%
TAAATGAACCATCCTGGTCC+TGG - chr8_4:47115079-47115098 Msa1329020:five_prime_UTR 45.0%
TATATCATGCTTCCAGGACC+AGG + chr8_4:47115094-47115113 None:intergenic 45.0%
AAGGCAAAACGGGGGTTAAA+GGG + chr8_4:47115363-47115382 None:intergenic 45.0%
AAAGGCAAAACGGGGGTTAA+AGG + chr8_4:47115364-47115383 None:intergenic 45.0%
CCATTTGAAAGGCAAAACGG+GGG + chr8_4:47115371-47115390 None:intergenic 45.0%
!!! TTTTCAATATATATTATTTT+AGG - chr8_4:47108345-47108364 Msa1329020:CDS 5.0%
!!! ATTTTTACTAAATAAATAAT+AGG + chr8_4:47113312-47113331 None:intergenic 5.0%
CATTCTGGTCGCATTTCCGT+TGG - chr8_4:47106475-47106494 Msa1329020:intron 50.0%
! TGGTCGCATTTCCGTTGGTT+GGG - chr8_4:47106480-47106499 Msa1329020:intron 50.0%
AAACTCTCCCAAGCAGTCTC+GGG - chr8_4:47107285-47107304 Msa1329020:intron 50.0%
CCCACAGTTATATCGTGGAC+AGG + chr8_4:47107557-47107576 None:intergenic 50.0%
! GCCGGAGAGGTAACAAGTTT+TGG - chr8_4:47107596-47107615 Msa1329020:intron 50.0%
GCTTGGATATGCTAAACCCG+TGG - chr8_4:47107768-47107787 Msa1329020:intron 50.0%
TGCTAAACCCGTGGCATTTG+TGG - chr8_4:47107777-47107796 Msa1329020:intron 50.0%
TTCCCCTGTCAAGTGCTCAA+TGG + chr8_4:47107956-47107975 None:intergenic 50.0%
! AAACCTCTGGAGGCCAAAGT+TGG - chr8_4:47107979-47107998 Msa1329020:intron 50.0%
GTTGGAGATAGAGTTCCTGG+CGG - chr8_4:47107997-47108016 Msa1329020:intron 50.0%
!! GTTAGTTCTGAGGTTGCTGG+TGG - chr8_4:47108397-47108416 Msa1329020:CDS 50.0%
!! GGAGTTGGTGTTGGTGTTGT+TGG - chr8_4:47108440-47108459 Msa1329020:intron 50.0%
CAGCTGGTGCAGTATGAATG+GGG + chr8_4:47109367-47109386 None:intergenic 50.0%
TCATACTGCACCAGCTGTTC+AGG - chr8_4:47109370-47109389 Msa1329020:intron 50.0%
TTCTCTGCTCATCTGCTGTG+AGG - chr8_4:47109417-47109436 Msa1329020:CDS 50.0%
CTCATCTGCTGTGAGGATTG+AGG - chr8_4:47109424-47109443 Msa1329020:CDS 50.0%
AGTAGGCTGCAGGAGTAGAA+AGG + chr8_4:47109498-47109517 None:intergenic 50.0%
! ACAGGGACATTGACTACTGG+TGG - chr8_4:47110826-47110845 Msa1329020:intron 50.0%
ACAGGGCAGTACAACTGTAC+TGG - chr8_4:47112021-47112040 Msa1329020:intron 50.0%
! GCACCTATATTTGTTGGGGC+AGG - chr8_4:47112247-47112266 Msa1329020:intron 50.0%
TGGGAAGAGGGGCAGAAAAA+GGG + chr8_4:47112385-47112404 None:intergenic 50.0%
TTGGGAAGAGGGGCAGAAAA+AGG + chr8_4:47112386-47112405 None:intergenic 50.0%
ATCTGCTAACCCCGCTTAGT+GGG - chr8_4:47112435-47112454 Msa1329020:CDS 50.0%
TAACCCCGCTTAGTGGGATA+AGG - chr8_4:47112441-47112460 Msa1329020:CDS 50.0%
! AAGCCTTATCCCACTAAGCG+GGG + chr8_4:47112447-47112466 None:intergenic 50.0%
! CAAGCCTTATCCCACTAAGC+GGG + chr8_4:47112448-47112467 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+CGG + chr8_4:47112449-47112468 None:intergenic 50.0%
GGCCTCTTAATCTGTTAGGC+CGG + chr8_4:47112505-47112524 None:intergenic 50.0%
ATGATGTTCACAACCAGGGC+CGG + chr8_4:47112789-47112808 None:intergenic 50.0%
GTTAGTCAGTAAGGCCCAGA+AGG + chr8_4:47112843-47112862 None:intergenic 50.0%
TCAACGTGACCTGCATCAAG+TGG + chr8_4:47112865-47112884 None:intergenic 50.0%
!! CGTTGATTCACCTGGAGGAT+AGG - chr8_4:47112879-47112898 Msa1329020:intron 50.0%
ACATCAAAAACCCCTGGACG+AGG + chr8_4:47112905-47112924 None:intergenic 50.0%
! TGCAACTGCGCTACACCTTT+TGG - chr8_4:47113952-47113971 Msa1329020:intron 50.0%
GGGGGAGGCTTAATTATGGT+TGG - chr8_4:47114206-47114225 Msa1329020:intron 50.0%
! CACTTGCTGCTGCAACTGTT+GGG - chr8_4:47114252-47114271 Msa1329020:intron 50.0%
ATCTCGGCAGACAACTTCAC+TGG - chr8_4:47114373-47114392 Msa1329020:intron 50.0%
!! TGGCTCTGGCATACATCTGT+TGG - chr8_4:47114435-47114454 Msa1329020:intron 50.0%
! GGCTCTGGCATACATCTGTT+GGG - chr8_4:47114436-47114455 Msa1329020:intron 50.0%
! GCTTCCCTTCCGTCAGTTTT+GGG - chr8_4:47114558-47114577 Msa1329020:intron 50.0%
! CCCCCGTTTTGCCTTTCAAA+TGG - chr8_4:47115368-47115387 Msa1329020:five_prime_UTR 50.0%
CTGGTCGCATTTCCGTTGGT+TGG - chr8_4:47106479-47106498 Msa1329020:intron 55.0%
! GGTCGCATTTCCGTTGGTTG+GGG - chr8_4:47106481-47106500 Msa1329020:intron 55.0%
!! ATGGGGAACGCTTTGGAAGG+AGG - chr8_4:47106718-47106737 Msa1329020:CDS 55.0%
!! TGGGGAACGCTTTGGAAGGA+GGG - chr8_4:47106719-47106738 Msa1329020:CDS 55.0%
TATCGTGGACAGGAACCCTC+TGG + chr8_4:47107547-47107566 None:intergenic 55.0%
TTACCTCTCCGGCACCAACA+AGG + chr8_4:47107589-47107608 None:intergenic 55.0%
GACAGGGGAAGTCAAACCTC+TGG - chr8_4:47107966-47107985 Msa1329020:intron 55.0%
AGGGGAAGTCAAACCTCTGG+AGG - chr8_4:47107969-47107988 Msa1329020:intron 55.0%
TCTCCAACTTTGGCCTCCAG+AGG + chr8_4:47107985-47108004 None:intergenic 55.0%
ATAGAGTTCCTGGCGGTGCA+AGG - chr8_4:47108004-47108023 Msa1329020:intron 55.0%
TCTATGTTCCTTGCACCGCC+AGG + chr8_4:47108015-47108034 None:intergenic 55.0%
GGCGGTGCAAGGAACATAGA+TGG - chr8_4:47108015-47108034 Msa1329020:intron 55.0%
GCTATGCTCAAGTAGGCTGC+AGG + chr8_4:47109508-47109527 None:intergenic 55.0%
CTACAGAGCCTTAGGGCTCA+TGG - chr8_4:47109701-47109720 Msa1329020:intron 55.0%
TGCTGCAACCATGAGCCCTA+AGG + chr8_4:47109712-47109731 None:intergenic 55.0%
TGCAGCATCACCATGTGCCT+TGG - chr8_4:47109725-47109744 Msa1329020:intron 55.0%
ATCACCATGTGCCTTGGCTG+TGG - chr8_4:47109731-47109750 Msa1329020:intron 55.0%
TGCACAGGAGCTGATTGCTG+TGG + chr8_4:47109772-47109791 None:intergenic 55.0%
TGTTGCGGCAGCCATGGAAA+AGG - chr8_4:47110954-47110973 Msa1329020:intron 55.0%
GTTGCGGCAGCCATGGAAAA+GGG - chr8_4:47110955-47110974 Msa1329020:intron 55.0%
! GTGGGTAGTGCCCTTTTCCA+TGG + chr8_4:47110968-47110987 None:intergenic 55.0%
GTAGCAGTAAGGCCTCTACC+AGG + chr8_4:47111407-47111426 None:intergenic 55.0%
GATCTGCTAACCCCGCTTAG+TGG - chr8_4:47112434-47112453 Msa1329020:CDS 55.0%
CCGCTTAGTGGGATAAGGCT+TGG - chr8_4:47112446-47112465 Msa1329020:CDS 55.0%
GGCCGGCCTAACAGATTAAG+AGG - chr8_4:47112500-47112519 Msa1329020:intron 55.0%
TGCGACCTAAAGCCCTTGCT+TGG - chr8_4:47112746-47112765 Msa1329020:intron 55.0%
GCGACCTAAAGCCCTTGCTT+GGG - chr8_4:47112747-47112766 Msa1329020:intron 55.0%
GCAACCCAAGCAAGGGCTTT+AGG + chr8_4:47112754-47112773 None:intergenic 55.0%
!! GCAGGTCACGTTGATTCACC+TGG - chr8_4:47112871-47112890 Msa1329020:intron 55.0%
!! GGTCACGTTGATTCACCTGG+AGG - chr8_4:47112874-47112893 Msa1329020:intron 55.0%
ACAGTTGCAGCAGCAAGTGC+TGG + chr8_4:47114251-47114270 None:intergenic 55.0%
! GCACTTGCTGCTGCAACTGT+TGG - chr8_4:47114251-47114270 Msa1329020:intron 55.0%
! GGCTTCCCTTCCGTCAGTTT+TGG - chr8_4:47114557-47114576 Msa1329020:intron 55.0%
AAGCAACCAGCCAGAGCTTG+AGG + chr8_4:47114936-47114955 None:intergenic 55.0%
TCATGCTTCCAGGACCAGGA+TGG + chr8_4:47115090-47115109 None:intergenic 55.0%
!! TGTCCTTGTTGGTGCCGGAG+AGG - chr8_4:47107583-47107602 Msa1329020:intron 60.0%
TGGTAATTGTGGCACCGCCG+TGG + chr8_4:47107936-47107955 None:intergenic 60.0%
TGCCTTGGCTGTGGCTCCAT+TGG - chr8_4:47109740-47109759 Msa1329020:intron 60.0%
TGCCAATGGAGCCACAGCCA+AGG + chr8_4:47109745-47109764 None:intergenic 60.0%
!! TCTTGCTGTTGCGGCAGCCA+TGG - chr8_4:47110948-47110967 Msa1329020:intron 60.0%
!! AAGGGCACTACCCACCCCAT+TGG - chr8_4:47110973-47110992 Msa1329020:intron 60.0%
GCACTACCCACCCCATTGGA+AGG - chr8_4:47110977-47110996 Msa1329020:intron 60.0%
! AAGCCCTTGCTTGGGTTGCC+TGG - chr8_4:47112755-47112774 Msa1329020:intron 60.0%
CACAACCAGGGCCGGTCTAA+GGG + chr8_4:47112781-47112800 None:intergenic 60.0%
TCACAACCAGGGCCGGTCTA+AGG + chr8_4:47112782-47112801 None:intergenic 60.0%
TGGAGGATAGGCCTCGTCCA+GGG - chr8_4:47112891-47112910 Msa1329020:intron 60.0%
GGAGCCACAGCCAAGGCACA+TGG + chr8_4:47109738-47109757 None:intergenic 65.0%
GGGCCAGGCAACCCAAGCAA+GGG + chr8_4:47112761-47112780 None:intergenic 65.0%
AGGGCCAGGCAACCCAAGCA+AGG + chr8_4:47112762-47112781 None:intergenic 65.0%
GGGTTGCCTGGCCCTTAGAC+CGG - chr8_4:47112767-47112786 Msa1329020:intron 65.0%
CTGGACGAGGCCTATCCTCC+AGG + chr8_4:47112892-47112911 None:intergenic 65.0%
CTGGAGGATAGGCCTCGTCC+AGG - chr8_4:47112890-47112909 Msa1329020:intron 65.0%
GGAGGATAGGCCTCGTCCAG+GGG - chr8_4:47112892-47112911 Msa1329020:intron 65.0%
CCAGGGCCGGTCTAAGGGCC+AGG + chr8_4:47112776-47112795 None:intergenic 75.0%
CCTGGCCCTTAGACCGGCCC+TGG - chr8_4:47112773-47112792 Msa1329020:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 47105844 47115468 47105844 ID=Msa1329020;Name=Msa1329020
chr8_4 mRNA 47105844 47115468 47105844 ID=Msa1329020-mRNA-1;Parent=Msa1329020;Name=Msa1329020-mRNA-1;_AED=0.17;_eAED=0.17;_QI=541|0.81|0.91|1|0.90|0.83|12|265|637
chr8_4 exon 47105844 47106288 47105844 ID=Msa1329020-mRNA-1:exon:13547;Parent=Msa1329020-mRNA-1
chr8_4 exon 47106710 47106796 47106710 ID=Msa1329020-mRNA-1:exon:13546;Parent=Msa1329020-mRNA-1
chr8_4 exon 47106918 47107105 47106918 ID=Msa1329020-mRNA-1:exon:13545;Parent=Msa1329020-mRNA-1
chr8_4 exon 47108221 47108437 47108221 ID=Msa1329020-mRNA-1:exon:13544;Parent=Msa1329020-mRNA-1
chr8_4 exon 47109402 47109536 47109402 ID=Msa1329020-mRNA-1:exon:13543;Parent=Msa1329020-mRNA-1
chr8_4 exon 47109870 47109975 47109870 ID=Msa1329020-mRNA-1:exon:13542;Parent=Msa1329020-mRNA-1
chr8_4 exon 47110314 47110555 47110314 ID=Msa1329020-mRNA-1:exon:13541;Parent=Msa1329020-mRNA-1
chr8_4 exon 47111515 47111627 47111515 ID=Msa1329020-mRNA-1:exon:13540;Parent=Msa1329020-mRNA-1
chr8_4 exon 47112311 47112506 47112311 ID=Msa1329020-mRNA-1:exon:13539;Parent=Msa1329020-mRNA-1
chr8_4 exon 47113259 47113405 47113259 ID=Msa1329020-mRNA-1:exon:13538;Parent=Msa1329020-mRNA-1
chr8_4 exon 47113708 47113892 47113708 ID=Msa1329020-mRNA-1:exon:13537;Parent=Msa1329020-mRNA-1
chr8_4 exon 47114810 47115468 47114810 ID=Msa1329020-mRNA-1:exon:13536;Parent=Msa1329020-mRNA-1
chr8_4 five_prime_UTR 47114928 47115468 47114928 ID=Msa1329020-mRNA-1:five_prime_utr;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47114810 47114927 47114810 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47113708 47113892 47113708 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47113259 47113405 47113259 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47112311 47112506 47112311 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47111515 47111627 47111515 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47110314 47110555 47110314 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47109870 47109975 47109870 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47109402 47109536 47109402 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47108221 47108437 47108221 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47106918 47107105 47106918 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47106710 47106796 47106710 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 CDS 47106109 47106288 47106109 ID=Msa1329020-mRNA-1:cds;Parent=Msa1329020-mRNA-1
chr8_4 three_prime_UTR 47105844 47106108 47105844 ID=Msa1329020-mRNA-1:three_prime_utr;Parent=Msa1329020-mRNA-1
Gene Sequence

>Msa1329020

ATGTTGCGTATCAACTGCTTTGTTTGTTGCTGCAGCTATTTCCCCTCATACTTTGCCCAAATCACTCATCAAACCTGTCCAAAACTCGTTCATTCTGGTCGCATTTCCGTTGGTTGGGCTGAAGAGTATTTCACAAGTCGTTCAATGGTTGATGTTAAAGAGTTGAAGGAGAACAATCCAGAATTTGCACTTGTTCTTGATACAAAAGATAATAAACTTCCTAATACATTTGATTTCAAATACCAGAGGGTTCCTGTCCACGATATAACTGTGGGATCATATGTCCTTGTTGGTGCCGGAGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCACGGCGGTGCCACAATTACCATTGAGCACTTGACAGGGGAAGTCAAACCTCTGGAGGCCAAAGTTGGAGATAGAGTTCCTGGCGGTGCAAGGAACATAGATGGTAGAATAATTGTGAAGGTAACAAAGACATGGAAGGAATCAACTCTAAGCAAAATTGTGCAGTTGACTGAAGAAGCTCAGTTGAATAGACCTAAACTTCAAAGGTGGCTGGATGAATTTGGTGAGCGTTACAGCAAAGTTGTTGTGGTGTTATCAATTGCTATTGCTGTTCTTGGTCCACTTGTATTTAAGTGGCCATTCTTTAGTACACCAGCTTGCAGAGGTTCTATCTACAGAGCCTTAGGGCTCATGGTTGCAGCATCACCATGTGCCTTGGCTGTGGCTCCATTGGCATATGCCACAGCAATCAGCTCCTGTGCAAAAAAGGGCATATTACTCAAAGGTGGACATGTTCTGGATGCACTAGCTTCATGCCATACCATTGCATTTGATAAAACAGGGACATTGACTACTGGTGGACTTGTATTCAAGGCAATTGAGCCTGTTTACGGTCATCGCATTAGAAACAAGGAATCAAACATATCTTCTTGTTGCATTCCCACCTGTGAAAAGGAAGCTCTTGCTGTTGCGGCAGCCATGGAAAAGGGCACTACCCACCCCATTGGAAGGGCTGTGGTTGAACATAGTGAAGGGAAAGACCTCCCTTCTGTCTCTGTTGAAAATTTTGAGTACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAACAGCATTGAGTCAGGAGCTGGAGGTGCTAACCTATTGAAAGCATCACTTGGGTCTATAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAATCAAAAAAGGTCAAGGAAGCTATTAATGCATCTTCTTATGGCAGTGAATTTGTCACGTTGATTCACCTGGAGGATAGGCCTCGTCCAGGGGTTTTTGATGTTATTCAAGAATTGCAAGATGAAGCAAAGTTCCGTGTGATGATGTTAACTGGTGATCATGAATATAGTGCAAAGAGAGTTGCAAGTGCTGTGGGTATCAGAGAGTTTCATTGCAACCTGAAGCCTGAAGATAAGTTGCGTCATGTAAAGGATATCTCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATTAATGATGCTCCAGCACTTGCTGCTGCAACTGTTGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCTATAGCTGTTGCAGATGTGCTGTTGCTTCGTGAAAATATTTCTGCAGTGCCATTCTGTATTGCCAAATCTCGGCAGACAACTTCACTGATTAAGCAAAATGTAGCTCTGGCATTGTCTAGCATATTCTTGGCTTCCCTTCCGTCAGTTTTGGGATTTCTTCCATTGTGGATAACGGTTCTCTTACATGAAGGCGGAACCTTGCTTGTTTGTCTCAACTCCATACGTGGTTTAAATGAACCATCCTGGTCCTGGAAGCATGATATATTACAGTTGATTGGCAAGGTTAAATCTAGACTCTCCTCTCTTAGGACAAATATAACAGGCTCAAGTAGCATTACAACCGCGAATTTGTGA
Protein sequence

>Msa1329020

MLRINCFVCCCSYFPSYFAQITHQTCPKLVHSGRISVGWAEEYFTSRSMVDVKELKENNPEFALVLDTKDNKLPNTFDFKYQRVPVHDITVGSYVLVGAGESVPVDCEVFHGGATITIEHLTGEVKPLEAKVGDRVPGGARNIDGRIIVKVTKTWKESTLSKIVQLTEEAQLNRPKLQRWLDEFGERYSKVVVVLSIAIAVLGPLVFKWPFFSTPACRGSIYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLVFKAIEPVYGHRIRNKESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVEHSEGKDLPSVSVENFEYFPGRGLTATVNSIESGAGGANLLKASLGSIDFITSFCQSEDESKKVKEAINASSYGSEFVTLIHLEDRPRPGVFDVIQELQDEAKFRVMMLTGDHEYSAKRVASAVGIREFHCNLKPEDKLRHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFLASLPSVLGFLPLWITVLLHEGGTLLVCLNSIRGLNEPSWSWKHDILQLIGKVKSRLSSLRTNITGSSSITTANL*