AlfalfaGEDB | Msa0714930

M. sativa cultivar zhongmu-4 / Msa0714930

KEGG: -
GO: -
PFAM: PF03763.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0714930	XP_003611736.1	96.560	407	8	3	1	404	1	404	0.0	793

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0714930	G7K6N7	96.560	407	8	3	1	404	1	404	0.0	793

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0021980	Msa0714930	0.841504	4.564764e-58	-8.615850e-47
Msa0053480	Msa0714930	0.840411	8.835982e-58	-8.615850e-47
Msa0070090	Msa0714930	0.851057	1.136981e-60	-8.615850e-47
Msa0089410	Msa0714930	0.814616	1.406976e-51	-8.615850e-47
Msa0090350	Msa0714930	0.819982	8.725894e-53	-8.615850e-47
Msa0099090	Msa0714930	0.805380	1.372677e-49	-8.615850e-47
Msa0117300	Msa0714930	0.834230	3.380168e-56	-8.615850e-47
Msa0607620	Msa0714930	0.812492	4.126542e-51	-8.615850e-47
Msa0619670	Msa0714930	-0.821343	4.246295e-53	-8.615850e-47
Msa0636750	Msa0714930	0.804408	2.191253e-49	-8.615850e-47
Msa0636760	Msa0714930	0.806518	7.911285e-50	-8.615850e-47
Msa0648300	Msa0714930	0.809278	2.047845e-50	-8.615850e-47
Msa0649530	Msa0714930	0.808563	2.911921e-50	-8.615850e-47
Msa0657860	Msa0714930	0.802056	6.724955e-49	-8.615850e-47
Msa0664110	Msa0714930	0.852947	3.304341e-61	-8.615850e-47
Msa0664130	Msa0714930	0.852966	3.262131e-61	-8.615850e-47
Msa0684910	Msa0714930	0.819313	1.239981e-52	-8.615850e-47
Msa0691140	Msa0714930	0.821090	4.856224e-53	-8.615850e-47
Msa0714060	Msa0714930	0.809660	1.695087e-50	-8.615850e-47
Msa0714200	Msa0714930	0.807512	4.875057e-50	-8.615850e-47
Msa0714930	Msa0729780	0.803769	2.976637e-49	-8.615850e-47
Msa0714930	Msa0748980	0.814043	1.883079e-51	-8.615850e-47
Msa0714930	Msa0753330	0.849353	3.414590e-60	-8.615850e-47
Msa0714930	Msa0756940	0.942480	6.676340e-102	-8.615850e-47
Msa0714930	Msa0795400	0.805944	1.044992e-49	-8.615850e-47
Msa0714930	Msa0797210	0.805621	1.222093e-49	-8.615850e-47
Msa0714930	Msa0825520	0.808432	3.105534e-50	-8.615850e-47
Msa0714930	Msa0832560	0.819012	1.451874e-52	-8.615850e-47
Msa0714930	Msa0835550	0.804599	1.999182e-49	-8.615850e-47
Msa0714930	Msa0836510	0.945710	1.832462e-104	-8.615850e-47
Msa0714930	Msa0864730	0.806317	8.722630e-50	-8.615850e-47
Msa0714930	Msa0864750	0.805231	1.475142e-49	-8.615850e-47
Msa0714930	Msa0887000	0.809262	2.064504e-50	-8.615850e-47
Msa0714930	Msa0930090	0.827385	1.611286e-54	-8.615850e-47
Msa0714930	Msa0984820	0.803765	2.981339e-49	-8.615850e-47
Msa0714930	Msa1008960	0.831100	2.021779e-55	-8.615850e-47
Msa0714930	Msa1018720	0.821236	4.494332e-53	-8.615850e-47
Msa0714930	Msa1031220	0.828703	7.756773e-55	-8.615850e-47
Msa0714930	Msa1044450	0.854432	1.235608e-61	-8.615850e-47
Msa0714930	Msa1050320	0.850885	1.271110e-60	-8.615850e-47
Msa0714930	Msa1078810	0.814273	1.675209e-51	-8.615850e-47
Msa0714930	Msa1147190	0.824092	9.734112e-54	-8.615850e-47
Msa0714930	Msa1169640	0.801015	1.098854e-48	-8.615850e-47
Msa0714930	Msa1182400	0.809872	1.526482e-50	-8.615850e-47
Msa0714930	Msa1190980	0.808928	2.433314e-50	-8.615850e-47
Msa0714930	Msa1194170	-0.821574	3.755330e-53	-8.615850e-47
Msa0714930	Msa1204390	0.830338	3.107536e-55	-8.615850e-47
Msa0714930	Msa1211280	0.811234	7.750707e-51	-8.615850e-47
Msa0714930	Msa1211370	0.805303	1.424885e-49	-8.615850e-47
Msa0714930	Msa1230190	0.816646	4.967482e-52	-8.615850e-47
Msa0714930	Msa1244300	0.805185	1.508015e-49	-8.615850e-47
Msa0714930	Msa1272770	0.806546	7.806295e-50	-8.615850e-47
Msa0714930	Msa1287160	0.802116	6.534876e-49	-8.615850e-47
Msa0714930	Msa1287340	0.805695	1.178927e-49	-8.615850e-47
Msa0714930	Msa1293580	0.803284	3.751633e-49	-8.615850e-47
Msa0714930	Msa1296610	0.820512	6.596353e-53	-8.615850e-47
Msa0714930	Msa1326900	0.806972	6.343380e-50	-8.615850e-47
Msa0714930	Msa1328600	0.804046	2.607147e-49	-8.615850e-47
Msa0714930	Msa1329020	0.825344	4.934403e-54	-8.615850e-47
Msa0714930	Msa1329820	0.814120	1.811554e-51	-8.615850e-47
Msa0714930	Msa1339310	0.807124	5.891920e-50	-8.615850e-47
Msa0714930	Msa1346920	0.831742	1.404935e-55	-8.615850e-47
Msa0714930	Msa1356730	0.815711	8.038613e-52	-8.615850e-47
Msa0714930	Msa1358030	0.820526	6.548893e-53	-8.615850e-47
Msa0714930	Msa1368660	0.809947	1.470832e-50	-8.615850e-47
Msa0714930	Msa1384620	0.809529	1.809112e-50	-8.615850e-47
Msa0714930	Msa1388270	0.812715	3.687170e-51	-8.615850e-47
Msa0714930	Msa1391600	0.808358	3.221802e-50	-8.615850e-47
Msa0714930	Msa1397540	0.800618	1.324675e-48	-8.615850e-47
Msa0714930	Msa1397550	0.818502	1.896195e-52	-8.615850e-47
Msa0714930	Msa1413880	0.815350	9.671513e-52	-8.615850e-47
Msa0714930	Msa1432250	0.819993	8.673944e-53	-8.615850e-47
Msa0714930	Msa1433380	0.828952	6.754668e-55	-8.615850e-47
Msa0714930	Msa1439160	0.803226	3.856666e-49	-8.615850e-47
Msa0714930	Msa1445700	0.803236	3.838870e-49	-8.615850e-47
Msa0714930	Msa1450850	0.820904	5.361515e-53	-8.615850e-47
Msa0714930	Msa1457070	0.821323	4.292829e-53	-8.615850e-47
Msa0714930	Msa1459630	0.821181	4.627379e-53	-8.615850e-47
Msa0714930	Msa1460310	-0.814497	1.494740e-51	-8.615850e-47
Msa0714930	Msa1460530	0.815109	1.094077e-51	-8.615850e-47
Msa0131090	Msa0714930	0.822700	2.059316e-53	-8.615850e-47
Msa0136520	Msa0714930	0.815983	6.988338e-52	-8.615850e-47
Msa0148430	Msa0714930	0.809503	1.832172e-50	-8.615850e-47
Msa0155500	Msa0714930	0.801204	1.005209e-48	-8.615850e-47
Msa0160650	Msa0714930	0.846541	2.035673e-59	-8.615850e-47
Msa0163530	Msa0714930	0.807808	4.217841e-50	-8.615850e-47
Msa0184030	Msa0714930	0.835309	1.808497e-56	-8.615850e-47
Msa0201910	Msa0714930	0.819847	9.369270e-53	-8.615850e-47
Msa0207220	Msa0714930	0.817473	3.238851e-52	-8.615850e-47
Msa0208400	Msa0714930	0.803363	3.612312e-49	-8.615850e-47
Msa0208560	Msa0714930	0.803985	2.684350e-49	-8.615850e-47
Msa0365360	Msa0714930	0.815361	9.615691e-52	-8.615850e-47
Msa0373110	Msa0714930	0.802809	4.703810e-49	-8.615850e-47
Msa0379720	Msa0714930	0.809512	1.824077e-50	-8.615850e-47
Msa0387180	Msa0714930	-0.805750	1.148189e-49	-8.615850e-47
Msa0412660	Msa0714930	0.811972	5.358459e-51	-8.615850e-47
Msa0421390	Msa0714930	0.820975	5.163199e-53	-8.615850e-47
Msa0429100	Msa0714930	0.824640	7.233894e-54	-8.615850e-47
Msa0429130	Msa0714930	0.813822	2.107025e-51	-8.615850e-47
Msa0431250	Msa0714930	0.809582	1.761852e-50	-8.615850e-47
Msa0431390	Msa0714930	0.842836	2.026771e-58	-8.615850e-47
Msa0431940	Msa0714930	0.810126	1.345993e-50	-8.615850e-47
Msa0441780	Msa0714930	-0.833259	5.908347e-56	-8.615850e-47
Msa0451370	Msa0714930	0.800254	1.570737e-48	-8.615850e-47
Msa0467550	Msa0714930	0.812636	3.837852e-51	-8.615850e-47
Msa0468050	Msa0714930	-0.837012	6.680332e-57	-8.615850e-47
Msa0244370	Msa0714930	0.819630	1.050136e-52	-8.615850e-47
Msa0251140	Msa0714930	0.809245	2.081870e-50	-8.615850e-47
Msa0264940	Msa0714930	-0.815409	9.381898e-52	-8.615850e-47
Msa0282880	Msa0714930	0.820677	6.044023e-53	-8.615850e-47
Msa0288270	Msa0714930	0.818533	1.865323e-52	-8.615850e-47
Msa0288280	Msa0714930	0.822172	2.730615e-53	-8.615850e-47
Msa0302990	Msa0714930	-0.814038	1.888508e-51	-8.615850e-47
Msa0321180	Msa0714930	0.811098	8.298179e-51	-8.615850e-47
Msa0321200	Msa0714930	0.811706	6.123255e-51	-8.615850e-47
Msa0324390	Msa0714930	0.835011	2.150167e-56	-8.615850e-47
Msa0324430	Msa0714930	0.834626	2.688752e-56	-8.615850e-47
Msa0338610	Msa0714930	0.819691	1.016974e-52	-8.615850e-47
Msa0343200	Msa0714930	0.943649	8.223894e-103	-8.615850e-47
Msa0343460	Msa0714930	0.813644	2.305898e-51	-8.615850e-47
Msa0359230	Msa0714930	0.809270	2.055707e-50	-8.615850e-47
Msa0520810	Msa0714930	0.820249	7.580085e-53	-8.615850e-47
Msa0525940	Msa0714930	0.826516	2.599477e-54	-8.615850e-47
Msa0535020	Msa0714930	0.821670	3.568328e-53	-8.615850e-47
Msa0535050	Msa0714930	0.825670	4.129573e-54	-8.615850e-47
Msa0555510	Msa0714930	0.814573	1.438285e-51	-8.615850e-47
Msa0563230	Msa0714930	0.813576	2.386745e-51	-8.615850e-47
Msa0575540	Msa0714930	0.837013	6.676915e-57	-8.615850e-47
Msa0584590	Msa0714930	0.804839	1.781397e-49	-8.615850e-47
Msa0585930	Msa0714930	0.825758	3.936008e-54	-8.615850e-47
Msa0591780	Msa0714930	0.819072	1.406890e-52	-8.615850e-47
Msa0595240	Msa0714930	0.801741	7.802144e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0714930	MtrunA17_Chr5g0402201	96.560	407	8	3	1	404	1	404	0.0	793
Msa0714930	MtrunA17_Chr8g0375091	54.265	422	153	14	9	402	27	436	2.69e-136	397
Msa0714930	MtrunA17_Chr1g0153281	40.436	413	198	15	14	403	232	619	9.52e-62	209

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0714930	AT1G45207.3	37.799	418	206	13	1	403	170	548	1.16e-61	208
Msa0714930	AT1G45207.2	37.352	423	206	14	1	403	171	554	2.58e-59	202
Msa0714930	AT4G36970.1	37.694	451	200	24	1	403	1	418	1.99e-44	159
Msa0714930	AT1G30320.1	25.926	351	221	12	64	399	175	501	1.44e-11	66.6

Find 101 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCTTCTTCATCCCCAATTT+TGG	0.168705	5_1:-7770958	Msa0714930:CDS
ATTGGGGATGAAGAAGATTT+TGG	0.174293	5_1:+7770963	None:intergenic
CCATATATCACACATGTTTA+AGG	0.174717	5_1:-7772024	Msa0714930:five_prime_UTR
TTTGGATTCATGGCCAAAAT+TGG	0.186250	5_1:+7770945	None:intergenic
CAGTCTCTGGAGAGCTCATT+TGG	0.224216	5_1:+7771006	None:intergenic
GAAGGACAATACCTTCTAAA+TGG	0.237584	5_1:-7771709	Msa0714930:CDS
TGTAGTCCAGTTTCTTCTTC+AGG	0.280909	5_1:-7771665	Msa0714930:CDS
TCTCTGAGTTCCACCCCTTT+TGG	0.282160	5_1:+7771810	None:intergenic
CCTTAAACATGTGTGATATA+TGG	0.302786	5_1:+7772024	None:intergenic
TCTCTGTAGTTTGGTTCCTT+TGG	0.307911	5_1:+7771848	None:intergenic
TTAGAAAGTTGGGAGATAAA+AGG	0.308842	5_1:+7769893	None:intergenic
CTGATATTGCTGCTAGTTGT+TGG	0.319510	5_1:+7771773	None:intergenic
TTCACTCATTGCTATACTAT+TGG	0.320190	5_1:-7772148	Msa0714930:five_prime_UTR
ATCTAAATTTCTTATCATAT+TGG	0.340386	5_1:-7771978	Msa0714930:five_prime_UTR
TTAAGGAACAAAATCAGTTT+TGG	0.343547	5_1:-7772007	Msa0714930:five_prime_UTR
TGAAAATACTTTCCAAGTCT+TGG	0.346095	5_1:+7770238	None:intergenic
GGTACAGAAGCCCAAGCTTC+AGG	0.348971	5_1:-7770795	Msa0714930:CDS
GCCAACACACCAGTTGTAAA+AGG	0.362730	5_1:+7771506	None:intergenic
GTTGTTCCTTGTGGCACAAT+TGG	0.366877	5_1:+7771602	None:intergenic
TATCCACATGACAATTTGTA+TGG	0.371024	5_1:-7771455	Msa0714930:CDS
AACTTCATACCATGGGAATT+AGG	0.371290	5_1:+7771320	None:intergenic
TCACCAAATATGGCAAAATA+TGG	0.373430	5_1:-7770214	Msa0714930:CDS
TTGGATTCATGGCCAAAATT+GGG	0.373749	5_1:+7770946	None:intergenic
GTGGAAAATACAAGTAGAAT+AGG	0.375128	5_1:+7772231	None:intergenic
TTCAATTCATAGGCCCTACT+TGG	0.382267	5_1:-7770077	Msa0714930:three_prime_UTR
AAATGCAATGTTCACTATCT+AGG	0.385709	5_1:+7770027	None:intergenic
AGTCTCTGGAGAGCTCATTT+GGG	0.405064	5_1:+7771007	None:intergenic
CTGTGTCGAACGCGCCTTCG+TGG	0.408576	5_1:-7771370	Msa0714930:CDS
ACATAGCCTGAAGAAGAAAC+TGG	0.409259	5_1:+7771659	None:intergenic
TATTGTCCTTCCACTGTTGA+AGG	0.414027	5_1:+7771721	None:intergenic
GATTCCACTGCGAAATGGTT+TGG	0.415097	5_1:-7771555	Msa0714930:CDS
AAGTGTTTGACAGATGAAAT+TGG	0.415236	5_1:-7770372	Msa0714930:intron
AGTTTGGTTCCTTTGGACTT+AGG	0.416458	5_1:+7771855	None:intergenic
ACATGCTGCTCCTGTTGAAC+TGG	0.418177	5_1:+7770263	None:intergenic
TGTTGAAGAGAAACAATATC+TGG	0.419812	5_1:+7771482	None:intergenic
AAGCTTAACACCAGTTCAAC+AGG	0.423673	5_1:-7770273	Msa0714930:CDS
TTATCTAACATACTTGGAAC+TGG	0.427894	5_1:+7770740	None:intergenic
CCTACGATTCCACTGCGAAA+TGG	0.433016	5_1:-7771560	Msa0714930:CDS
AGCAGCATGTTTCCAAGACT+TGG	0.435400	5_1:-7770250	Msa0714930:CDS
TCTGCATCATCCCATTTAGA+AGG	0.438875	5_1:+7771698	None:intergenic
ATTGTCATATTTCAATTCAT+AGG	0.439553	5_1:-7770087	Msa0714930:three_prime_UTR
AGAAGCCCAAGCTTCAGGTT+TGG	0.453435	5_1:-7770790	Msa0714930:CDS
AGTTATGTGTGGACAAGTAT+AGG	0.455548	5_1:+7772105	None:intergenic
TGTTGCTTGTATCAAAAGTC+AGG	0.456167	5_1:-7769942	Msa0714930:three_prime_UTR
CAATATCCAAACCTGAAGCT+TGG	0.467995	5_1:+7770784	None:intergenic
TGGAAAATACAAGTAGAATA+GGG	0.473619	5_1:+7772232	None:intergenic
ACCATTGAAAGAGCTTAGCT+TGG	0.475821	5_1:+7770836	None:intergenic
AAAGAAGAAATCGTCATCAA+TGG	0.476995	5_1:-7770348	Msa0714930:CDS
TAGCTTGGATGCATAACTCT+TGG	0.477663	5_1:+7770851	None:intergenic
AATATCCAAACCTGAAGCTT+GGG	0.478511	5_1:+7770785	None:intergenic
GTTAGAGATCAAAGATGTGC+AGG	0.480685	5_1:-7770904	Msa0714930:CDS
AAGGACAATACCTTCTAAAT+GGG	0.483996	5_1:-7771708	Msa0714930:CDS
TGGCTTGCAAAGCAGCTGCT+TGG	0.488792	5_1:+7770188	None:intergenic
AGTTCAGTGGTTAATGAGAA+TGG	0.504775	5_1:-7771407	Msa0714930:CDS
GGTTTAATTAATCTTTGTCA+AGG	0.506522	5_1:+7772045	None:intergenic
GGGTGAAACGCCAGCTACAT+AGG	0.507328	5_1:+7771742	None:intergenic
GATAAGAACAATTTGCATTG+AGG	0.516713	5_1:+7772186	None:intergenic
GTCAAGCTAATGTTATTAAG+TGG	0.521945	5_1:-7770875	Msa0714930:CDS
CTCTCCAGAGACTGAAAATG+AGG	0.524292	5_1:-7770997	Msa0714930:CDS
GGCGTTTCACCCTTCAACAG+TGG	0.525088	5_1:-7771731	Msa0714930:CDS
ATGAAGCTAAAATCATTGCA+TGG	0.527368	5_1:-7770612	Msa0714930:CDS
GTTTAATTAATCTTTGTCAA+GGG	0.528274	5_1:+7772046	None:intergenic
GGTAAAGAGTTGAAGAAAAG+TGG	0.529522	5_1:-7770816	Msa0714930:CDS
TGGATTCATGGCCAAAATTG+GGG	0.539740	5_1:+7770947	None:intergenic
AGAAGACAAGCCTATGTAGC+TGG	0.554075	5_1:-7771752	Msa0714930:CDS
CCATGGGAATTAGGCGAAGA+CGG	0.554746	5_1:+7771329	None:intergenic
AAGAACAATTTGCATTGAGG+TGG	0.556675	5_1:+7772189	None:intergenic
TTTACAGATGAGAAATGTGA+TGG	0.559064	5_1:-7771074	Msa0714930:intron
GCAGAAGGCTATTCCAAGTA+GGG	0.562327	5_1:+7770064	None:intergenic
ATACAAGCAACACGTGTGAA+AGG	0.564835	5_1:+7769953	None:intergenic
TCTGGTACCTCTCAGAAACT+AGG	0.565236	5_1:-7771884	Msa0714930:CDS
TCCAAGCTAAGCTCTTTCAA+TGG	0.565430	5_1:-7770837	Msa0714930:CDS
GTATAAATGTAAAGTGCAGA+AGG	0.566880	5_1:+7770049	None:intergenic
AATGGGATGATGCAGAGAGA+TGG	0.567472	5_1:-7771691	Msa0714930:CDS
GTCACATAGTGTTTCTCAAG+AGG	0.574885	5_1:-7771953	Msa0714930:five_prime_UTR
TCCACTGCGAAATGGTTTGG+TGG	0.575404	5_1:-7771552	Msa0714930:CDS
ATTGTCCTTCCACTGTTGAA+GGG	0.580321	5_1:+7771722	None:intergenic
CCGTCTTCGCCTAATTCCCA+TGG	0.580829	5_1:-7771329	Msa0714930:intron
TCACATAGTGTTTCTCAAGA+GGG	0.581172	5_1:-7771952	Msa0714930:five_prime_UTR
TTTCACCCTTCAACAGTGGA+AGG	0.582839	5_1:-7771727	Msa0714930:CDS
CCATTTCGCAGTGGAATCGT+AGG	0.587518	5_1:+7771560	None:intergenic
ATGAGATTGATCACGGAACA+TGG	0.590432	5_1:+7770168	None:intergenic
AACAATGAGCGCGGTGAATG+TGG	0.592370	5_1:+7772212	None:intergenic
TGAAGCTAAAATCATTGCAT+GGG	0.598593	5_1:-7770611	Msa0714930:CDS
TGCAGAAGGCTATTCCAAGT+AGG	0.600471	5_1:+7770063	None:intergenic
GAGTAGTAAGTTGTTCCTTG+TGG	0.607210	5_1:+7771593	None:intergenic
AGCTGCAATTAGAAAACTTG+AGG	0.609648	5_1:-7770563	Msa0714930:intron
CATTGATGATAATAGTTCAG+TGG	0.616824	5_1:-7771420	Msa0714930:CDS
AAAAGAACAAAAGTTATGTG+TGG	0.617990	5_1:+7772094	None:intergenic
AAAACATTGAAAACCAAAAG+GGG	0.619520	5_1:-7771823	Msa0714930:CDS
TGTGTATATGAGATTGATCA+CGG	0.635634	5_1:+7770161	None:intergenic
ACATTGAAAACCAAAAGGGG+TGG	0.639810	5_1:-7771820	Msa0714930:CDS
AGGTTCATTCCTAAGTCCAA+AGG	0.641804	5_1:-7771864	Msa0714930:CDS
ACCACCAAACCATTTCGCAG+TGG	0.646392	5_1:+7771551	None:intergenic
GGACCATACAAATTGTCATG+TGG	0.647753	5_1:+7771452	None:intergenic
AGTGGTCCAATTGTGCCACA+AGG	0.667585	5_1:-7771608	Msa0714930:CDS
GAATGAACCTAGTTTCTGAG+AGG	0.673385	5_1:+7771877	None:intergenic
TTATCATCAATGTCATAACG+TGG	0.704902	5_1:+7771431	None:intergenic
TTACAGATGAGAAATGTGAT+GGG	0.707865	5_1:-7771073	Msa0714930:intron
GAGAGAAGTTCTGACCACGA+AGG	0.753003	5_1:+7771356	None:intergenic
TTGAGGTGGAACAATGAGCG+CGG	0.764126	5_1:+7772203	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATCTAAATTTCTTATCATAT+TGG	-	chr5_1:7770187-7770206	Msa0714930:CDS	15.0%
!!	ATCTAAATTTCTTATCATAT+TGG	-	chr5_1:7770187-7770206	Msa0714930:CDS	15.0%
!!!	TTTGTTCTTTTATATATCGA+TGG	-	chr5_1:7770083-7770102	Msa0714930:three_prime_UTR	20.0%
!!	GTTTAATTAATCTTTGTCAA+GGG	+	chr5_1:7770122-7770141	None:intergenic	20.0%
!!	GTTAATATGAAAAAGAATTC+TGG	-	chr5_1:7770263-7770282	Msa0714930:CDS	20.0%
!!	AAAAAACATTGAAAACCAAA+AGG	-	chr5_1:7770340-7770359	Msa0714930:CDS	20.0%
!!	AAAAACATTGAAAACCAAAA+GGG	-	chr5_1:7770341-7770360	Msa0714930:CDS	20.0%
!!	ACAAAAATACTAAACGTTTA+GGG	+	chr5_1:7771072-7771091	None:intergenic	20.0%
!!	AACAAAAATACTAAACGTTT+AGG	+	chr5_1:7771073-7771092	None:intergenic	20.0%
!!	TAAATACATAAACACAACAA+TGG	+	chr5_1:7771494-7771513	None:intergenic	20.0%
!!	AAAAAAACTACAATGAACAT+GGG	+	chr5_1:7772031-7772050	None:intergenic	20.0%
!!	AAAAAAAACTACAATGAACA+TGG	+	chr5_1:7772032-7772051	None:intergenic	20.0%
!!!	TGTTCATTGTAGTTTTTTTT+AGG	-	chr5_1:7772032-7772051	Msa0714930:five_prime_UTR	20.0%
!!!	AGTTTTTTTTAGGTTTTTTC+AGG	-	chr5_1:7772042-7772061	Msa0714930:five_prime_UTR	20.0%
!!	ATTGTCATATTTCAATTCAT+AGG	-	chr5_1:7772078-7772097	Msa0714930:five_prime_UTR	20.0%
!!!	TTTGTTCTTTTATATATCGA+TGG	-	chr5_1:7770083-7770102	Msa0714930:three_prime_UTR	20.0%
!!	GTTTAATTAATCTTTGTCAA+GGG	+	chr5_1:7770122-7770141	None:intergenic	20.0%
!!	GTTAATATGAAAAAGAATTC+TGG	-	chr5_1:7770263-7770282	Msa0714930:CDS	20.0%
!!	AAAAAACATTGAAAACCAAA+AGG	-	chr5_1:7770340-7770359	Msa0714930:CDS	20.0%
!!	AAAAACATTGAAAACCAAAA+GGG	-	chr5_1:7770341-7770360	Msa0714930:CDS	20.0%
!!	ACAAAAATACTAAACGTTTA+GGG	+	chr5_1:7771072-7771091	None:intergenic	20.0%
!!	AACAAAAATACTAAACGTTT+AGG	+	chr5_1:7771073-7771092	None:intergenic	20.0%
!!	TAAATACATAAACACAACAA+TGG	+	chr5_1:7771494-7771513	None:intergenic	20.0%
!!	AAAAAAACTACAATGAACAT+GGG	+	chr5_1:7772031-7772050	None:intergenic	20.0%
!!	AAAAAAAACTACAATGAACA+TGG	+	chr5_1:7772032-7772051	None:intergenic	20.0%
!!!	TGTTCATTGTAGTTTTTTTT+AGG	-	chr5_1:7772032-7772051	Msa0714930:five_prime_UTR	20.0%
!!!	AGTTTTTTTTAGGTTTTTTC+AGG	-	chr5_1:7772042-7772061	Msa0714930:five_prime_UTR	20.0%
!!	ATTGTCATATTTCAATTCAT+AGG	-	chr5_1:7772078-7772097	Msa0714930:five_prime_UTR	20.0%
!	TGGAAAATACAAGTAGAATA+GGG	+	chr5_1:7769936-7769955	None:intergenic	25.0%
!	AAAAGAACAAAAGTTATGTG+TGG	+	chr5_1:7770074-7770093	None:intergenic	25.0%
!	GGTTTAATTAATCTTTGTCA+AGG	+	chr5_1:7770123-7770142	None:intergenic	25.0%
!!	TTAAGGAACAAAATCAGTTT+TGG	-	chr5_1:7770158-7770177	Msa0714930:three_prime_UTR	25.0%
!!!	ATGTTTTTTTCTCTGTAGTT+TGG	+	chr5_1:7770329-7770348	None:intergenic	25.0%
!	AAAACATTGAAAACCAAAAG+GGG	-	chr5_1:7770342-7770361	Msa0714930:CDS	25.0%
!	GTCAATGAATTAACTTTCAT+TGG	-	chr5_1:7770937-7770956	Msa0714930:CDS	25.0%
!	CAAAAATACTAAACGTTTAG+GGG	+	chr5_1:7771071-7771090	None:intergenic	25.0%
!!	CCTTTATCAATTTTTGACAT+AGG	+	chr5_1:7771136-7771155	None:intergenic	25.0%
!	CCTATGTCAAAAATTGATAA+AGG	-	chr5_1:7771133-7771152	Msa0714930:intron	25.0%
!	CATCTATTATCTAACATACT+TGG	+	chr5_1:7771434-7771453	None:intergenic	25.0%
!!	GTATTTTCATTCACCAAATA+TGG	-	chr5_1:7771941-7771960	Msa0714930:five_prime_UTR	25.0%
!	AAAAAACTACAATGAACATG+GGG	+	chr5_1:7772030-7772049	None:intergenic	25.0%
!!!	TTTTTTCAGGTAAACACAAT+AGG	-	chr5_1:7772055-7772074	Msa0714930:five_prime_UTR	25.0%
!	TGGAAAATACAAGTAGAATA+GGG	+	chr5_1:7769936-7769955	None:intergenic	25.0%
!	AAAAGAACAAAAGTTATGTG+TGG	+	chr5_1:7770074-7770093	None:intergenic	25.0%
!	GGTTTAATTAATCTTTGTCA+AGG	+	chr5_1:7770123-7770142	None:intergenic	25.0%
!!	TTAAGGAACAAAATCAGTTT+TGG	-	chr5_1:7770158-7770177	Msa0714930:three_prime_UTR	25.0%
!!!	ATGTTTTTTTCTCTGTAGTT+TGG	+	chr5_1:7770329-7770348	None:intergenic	25.0%
!	AAAACATTGAAAACCAAAAG+GGG	-	chr5_1:7770342-7770361	Msa0714930:CDS	25.0%
!	GTCAATGAATTAACTTTCAT+TGG	-	chr5_1:7770937-7770956	Msa0714930:CDS	25.0%
!	CAAAAATACTAAACGTTTAG+GGG	+	chr5_1:7771071-7771090	None:intergenic	25.0%
!!	CCTTTATCAATTTTTGACAT+AGG	+	chr5_1:7771136-7771155	None:intergenic	25.0%
!	CCTATGTCAAAAATTGATAA+AGG	-	chr5_1:7771133-7771152	Msa0714930:intron	25.0%
!	CATCTATTATCTAACATACT+TGG	+	chr5_1:7771434-7771453	None:intergenic	25.0%
!!	GTATTTTCATTCACCAAATA+TGG	-	chr5_1:7771941-7771960	Msa0714930:five_prime_UTR	25.0%
!	AAAAAACTACAATGAACATG+GGG	+	chr5_1:7772030-7772049	None:intergenic	25.0%
!!!	TTTTTTCAGGTAAACACAAT+AGG	-	chr5_1:7772055-7772074	Msa0714930:five_prime_UTR	25.0%
	GTGGAAAATACAAGTAGAAT+AGG	+	chr5_1:7769937-7769956	None:intergenic	30.0%
	GATAAGAACAATTTGCATTG+AGG	+	chr5_1:7769982-7770001	None:intergenic	30.0%
	TTCACTCATTGCTATACTAT+TGG	-	chr5_1:7770017-7770036	Msa0714930:three_prime_UTR	30.0%
	CCTTAAACATGTGTGATATA+TGG	+	chr5_1:7770144-7770163	None:intergenic	30.0%
	CCATATATCACACATGTTTA+AGG	-	chr5_1:7770141-7770160	Msa0714930:three_prime_UTR	30.0%
	AAGGACAATACCTTCTAAAT+GGG	-	chr5_1:7770457-7770476	Msa0714930:intron	30.0%
	AGAAATCCCAAATCAAAAAG+TGG	-	chr5_1:7770539-7770558	Msa0714930:intron	30.0%
!!!	ATTGGACCACTTTTTGATTT+GGG	+	chr5_1:7770548-7770567	None:intergenic	30.0%
!!!	AATTGGACCACTTTTTGATT+TGG	+	chr5_1:7770549-7770568	None:intergenic	30.0%
	TGTTGAAGAGAAACAATATC+TGG	+	chr5_1:7770686-7770705	None:intergenic	30.0%
	TATCCACATGACAATTTGTA+TGG	-	chr5_1:7770710-7770729	Msa0714930:intron	30.0%
	TTATCATCAATGTCATAACG+TGG	+	chr5_1:7770737-7770756	None:intergenic	30.0%
!	CATTGATGATAATAGTTCAG+TGG	-	chr5_1:7770745-7770764	Msa0714930:intron	30.0%
	TTTACAGATGAGAAATGTGA+TGG	-	chr5_1:7771091-7771110	Msa0714930:intron	30.0%
	TTACAGATGAGAAATGTGAT+GGG	-	chr5_1:7771092-7771111	Msa0714930:intron	30.0%
!!	AAGAAGATTTTGGAGATGAA+TGG	+	chr5_1:7771195-7771214	None:intergenic	30.0%
!	TTTTCTGAATGGCAACTTTT+TGG	+	chr5_1:7771241-7771260	None:intergenic	30.0%
!	TGATCTCTAACTTTTCTGAA+TGG	+	chr5_1:7771252-7771271	None:intergenic	30.0%
	GTCAAGCTAATGTTATTAAG+TGG	-	chr5_1:7771290-7771309	Msa0714930:intron	30.0%
	TTATCTAACATACTTGGAAC+TGG	+	chr5_1:7771428-7771447	None:intergenic	30.0%
	TTTCATTGAGTCAACAAAAG+AGG	-	chr5_1:7771462-7771481	Msa0714930:CDS	30.0%
	TTCATTGAGTCAACAAAAGA+GGG	-	chr5_1:7771463-7771482	Msa0714930:CDS	30.0%
!!!	ATGAACTTTCATTTTGAAGC+AGG	-	chr5_1:7771517-7771536	Msa0714930:CDS	30.0%
	ATGAAGCTAAAATCATTGCA+TGG	-	chr5_1:7771553-7771572	Msa0714930:CDS	30.0%
	TGAAGCTAAAATCATTGCAT+GGG	-	chr5_1:7771554-7771573	Msa0714930:CDS	30.0%
!!	TAATGAAATTGAGTTGGGTT+AGG	+	chr5_1:7771667-7771686	None:intergenic	30.0%
	TAACCCAACTCAATTTCATT+AGG	-	chr5_1:7771666-7771685	Msa0714930:CDS	30.0%
	GTTCCTAATGAAATTGAGTT+GGG	+	chr5_1:7771672-7771691	None:intergenic	30.0%
	TGTTCCTAATGAAATTGAGT+TGG	+	chr5_1:7771673-7771692	None:intergenic	30.0%
	AAGTGTTTGACAGATGAAAT+TGG	-	chr5_1:7771793-7771812	Msa0714930:CDS	30.0%
	AAAGAAGAAATCGTCATCAA+TGG	-	chr5_1:7771817-7771836	Msa0714930:CDS	30.0%
	TGAAAATACTTTCCAAGTCT+TGG	+	chr5_1:7771930-7771949	None:intergenic	30.0%
	TCACCAAATATGGCAAAATA+TGG	-	chr5_1:7771951-7771970	Msa0714930:five_prime_UTR	30.0%
!	AGACCATATTTTGCCATATT+TGG	+	chr5_1:7771957-7771976	None:intergenic	30.0%
	TGTGTATATGAGATTGATCA+CGG	+	chr5_1:7772007-7772026	None:intergenic	30.0%
	GTATAAATGTAAAGTGCAGA+AGG	+	chr5_1:7772119-7772138	None:intergenic	30.0%
	AAATGCAATGTTCACTATCT+AGG	+	chr5_1:7772141-7772160	None:intergenic	30.0%
	GTGGAAAATACAAGTAGAAT+AGG	+	chr5_1:7769937-7769956	None:intergenic	30.0%
	GATAAGAACAATTTGCATTG+AGG	+	chr5_1:7769982-7770001	None:intergenic	30.0%
	TTCACTCATTGCTATACTAT+TGG	-	chr5_1:7770017-7770036	Msa0714930:three_prime_UTR	30.0%
	CCTTAAACATGTGTGATATA+TGG	+	chr5_1:7770144-7770163	None:intergenic	30.0%
	CCATATATCACACATGTTTA+AGG	-	chr5_1:7770141-7770160	Msa0714930:three_prime_UTR	30.0%
	AAGGACAATACCTTCTAAAT+GGG	-	chr5_1:7770457-7770476	Msa0714930:intron	30.0%
	AGAAATCCCAAATCAAAAAG+TGG	-	chr5_1:7770539-7770558	Msa0714930:intron	30.0%
!!!	ATTGGACCACTTTTTGATTT+GGG	+	chr5_1:7770548-7770567	None:intergenic	30.0%
!!!	AATTGGACCACTTTTTGATT+TGG	+	chr5_1:7770549-7770568	None:intergenic	30.0%
	TGTTGAAGAGAAACAATATC+TGG	+	chr5_1:7770686-7770705	None:intergenic	30.0%
	TATCCACATGACAATTTGTA+TGG	-	chr5_1:7770710-7770729	Msa0714930:intron	30.0%
	TTATCATCAATGTCATAACG+TGG	+	chr5_1:7770737-7770756	None:intergenic	30.0%
!	CATTGATGATAATAGTTCAG+TGG	-	chr5_1:7770745-7770764	Msa0714930:intron	30.0%
	TTTACAGATGAGAAATGTGA+TGG	-	chr5_1:7771091-7771110	Msa0714930:intron	30.0%
	TTACAGATGAGAAATGTGAT+GGG	-	chr5_1:7771092-7771111	Msa0714930:intron	30.0%
!!	AAGAAGATTTTGGAGATGAA+TGG	+	chr5_1:7771195-7771214	None:intergenic	30.0%
!	TTTTCTGAATGGCAACTTTT+TGG	+	chr5_1:7771241-7771260	None:intergenic	30.0%
!	TGATCTCTAACTTTTCTGAA+TGG	+	chr5_1:7771252-7771271	None:intergenic	30.0%
	GTCAAGCTAATGTTATTAAG+TGG	-	chr5_1:7771290-7771309	Msa0714930:intron	30.0%
	TTATCTAACATACTTGGAAC+TGG	+	chr5_1:7771428-7771447	None:intergenic	30.0%
	TTTCATTGAGTCAACAAAAG+AGG	-	chr5_1:7771462-7771481	Msa0714930:CDS	30.0%
	TTCATTGAGTCAACAAAAGA+GGG	-	chr5_1:7771463-7771482	Msa0714930:CDS	30.0%
!!!	ATGAACTTTCATTTTGAAGC+AGG	-	chr5_1:7771517-7771536	Msa0714930:CDS	30.0%
	ATGAAGCTAAAATCATTGCA+TGG	-	chr5_1:7771553-7771572	Msa0714930:CDS	30.0%
	TGAAGCTAAAATCATTGCAT+GGG	-	chr5_1:7771554-7771573	Msa0714930:CDS	30.0%
!!	TAATGAAATTGAGTTGGGTT+AGG	+	chr5_1:7771667-7771686	None:intergenic	30.0%
	TAACCCAACTCAATTTCATT+AGG	-	chr5_1:7771666-7771685	Msa0714930:CDS	30.0%
	GTTCCTAATGAAATTGAGTT+GGG	+	chr5_1:7771672-7771691	None:intergenic	30.0%
	TGTTCCTAATGAAATTGAGT+TGG	+	chr5_1:7771673-7771692	None:intergenic	30.0%
	AAGTGTTTGACAGATGAAAT+TGG	-	chr5_1:7771793-7771812	Msa0714930:CDS	30.0%
	AAAGAAGAAATCGTCATCAA+TGG	-	chr5_1:7771817-7771836	Msa0714930:CDS	30.0%
	TGAAAATACTTTCCAAGTCT+TGG	+	chr5_1:7771930-7771949	None:intergenic	30.0%
	TCACCAAATATGGCAAAATA+TGG	-	chr5_1:7771951-7771970	Msa0714930:five_prime_UTR	30.0%
!	AGACCATATTTTGCCATATT+TGG	+	chr5_1:7771957-7771976	None:intergenic	30.0%
	TGTGTATATGAGATTGATCA+CGG	+	chr5_1:7772007-7772026	None:intergenic	30.0%
	GTATAAATGTAAAGTGCAGA+AGG	+	chr5_1:7772119-7772138	None:intergenic	30.0%
	AAATGCAATGTTCACTATCT+AGG	+	chr5_1:7772141-7772160	None:intergenic	30.0%
	AAGAACAATTTGCATTGAGG+TGG	+	chr5_1:7769979-7769998	None:intergenic	35.0%
	AGTTATGTGTGGACAAGTAT+AGG	+	chr5_1:7770063-7770082	None:intergenic	35.0%
	TCACATAGTGTTTCTCAAGA+GGG	-	chr5_1:7770213-7770232	Msa0714930:CDS	35.0%
	GAAGGACAATACCTTCTAAA+TGG	-	chr5_1:7770456-7770475	Msa0714930:intron	35.0%
	TGGAATCGTAGGTGAAAAAT+TGG	+	chr5_1:7770597-7770616	None:intergenic	35.0%
!	ATGAGTTCTCCTTTTACAAC+TGG	-	chr5_1:7770650-7770669	Msa0714930:intron	35.0%
	AGTTCAGTGGTTAATGAGAA+TGG	-	chr5_1:7770758-7770777	Msa0714930:CDS	35.0%
	AACTTCATACCATGGGAATT+AGG	+	chr5_1:7770848-7770867	None:intergenic	35.0%
	AGACTAGAACTTCATACCAT+GGG	+	chr5_1:7770855-7770874	None:intergenic	35.0%
	AAGACTAGAACTTCATACCA+TGG	+	chr5_1:7770856-7770875	None:intergenic	35.0%
!	ATTGGGGATGAAGAAGATTT+TGG	+	chr5_1:7771205-7771224	None:intergenic	35.0%
!	ATCTTCTTCATCCCCAATTT+TGG	-	chr5_1:7771207-7771226	Msa0714930:intron	35.0%
	TTGGATTCATGGCCAAAATT+GGG	+	chr5_1:7771222-7771241	None:intergenic	35.0%
	TTTGGATTCATGGCCAAAAT+TGG	+	chr5_1:7771223-7771242	None:intergenic	35.0%
!	ATGGCAACTTTTTGGATTCA+TGG	+	chr5_1:7771233-7771252	None:intergenic	35.0%
	GGTAAAGAGTTGAAGAAAAG+TGG	-	chr5_1:7771349-7771368	Msa0714930:CDS	35.0%
	AATATCCAAACCTGAAGCTT+GGG	+	chr5_1:7771383-7771402	None:intergenic	35.0%
	AGCTGCAATTAGAAAACTTG+AGG	-	chr5_1:7771602-7771621	Msa0714930:CDS	35.0%
	CTGAACTGAACATTCTTACA+TGG	-	chr5_1:7771633-7771652	Msa0714930:CDS	35.0%
	AAAGAAACCTCTGCATTTGT+CGG	+	chr5_1:7771752-7771771	None:intergenic	35.0%
	TGTCAAACACTTGCATAATC+AGG	+	chr5_1:7771785-7771804	None:intergenic	35.0%
!	TGTATTTTGCATCGTACATG+AGG	-	chr5_1:7772177-7772196	Msa0714930:five_prime_UTR	35.0%
!	TGTTGCTTGTATCAAAAGTC+AGG	-	chr5_1:7772223-7772242	Msa0714930:five_prime_UTR	35.0%
	AAGAACAATTTGCATTGAGG+TGG	+	chr5_1:7769979-7769998	None:intergenic	35.0%
	AGTTATGTGTGGACAAGTAT+AGG	+	chr5_1:7770063-7770082	None:intergenic	35.0%
	TCACATAGTGTTTCTCAAGA+GGG	-	chr5_1:7770213-7770232	Msa0714930:CDS	35.0%
	GAAGGACAATACCTTCTAAA+TGG	-	chr5_1:7770456-7770475	Msa0714930:intron	35.0%
	TGGAATCGTAGGTGAAAAAT+TGG	+	chr5_1:7770597-7770616	None:intergenic	35.0%
!	ATGAGTTCTCCTTTTACAAC+TGG	-	chr5_1:7770650-7770669	Msa0714930:intron	35.0%
	AGTTCAGTGGTTAATGAGAA+TGG	-	chr5_1:7770758-7770777	Msa0714930:CDS	35.0%
	AACTTCATACCATGGGAATT+AGG	+	chr5_1:7770848-7770867	None:intergenic	35.0%
	AGACTAGAACTTCATACCAT+GGG	+	chr5_1:7770855-7770874	None:intergenic	35.0%
	AAGACTAGAACTTCATACCA+TGG	+	chr5_1:7770856-7770875	None:intergenic	35.0%
!	ATTGGGGATGAAGAAGATTT+TGG	+	chr5_1:7771205-7771224	None:intergenic	35.0%
!	ATCTTCTTCATCCCCAATTT+TGG	-	chr5_1:7771207-7771226	Msa0714930:intron	35.0%
	TTGGATTCATGGCCAAAATT+GGG	+	chr5_1:7771222-7771241	None:intergenic	35.0%
	TTTGGATTCATGGCCAAAAT+TGG	+	chr5_1:7771223-7771242	None:intergenic	35.0%
!	ATGGCAACTTTTTGGATTCA+TGG	+	chr5_1:7771233-7771252	None:intergenic	35.0%
	GGTAAAGAGTTGAAGAAAAG+TGG	-	chr5_1:7771349-7771368	Msa0714930:CDS	35.0%
	AATATCCAAACCTGAAGCTT+GGG	+	chr5_1:7771383-7771402	None:intergenic	35.0%
	AGCTGCAATTAGAAAACTTG+AGG	-	chr5_1:7771602-7771621	Msa0714930:CDS	35.0%
	CTGAACTGAACATTCTTACA+TGG	-	chr5_1:7771633-7771652	Msa0714930:CDS	35.0%
	AAAGAAACCTCTGCATTTGT+CGG	+	chr5_1:7771752-7771771	None:intergenic	35.0%
	TGTCAAACACTTGCATAATC+AGG	+	chr5_1:7771785-7771804	None:intergenic	35.0%
!	TGTATTTTGCATCGTACATG+AGG	-	chr5_1:7772177-7772196	Msa0714930:five_prime_UTR	35.0%
!	TGTTGCTTGTATCAAAAGTC+AGG	-	chr5_1:7772223-7772242	Msa0714930:five_prime_UTR	35.0%
	GTCACATAGTGTTTCTCAAG+AGG	-	chr5_1:7770212-7770231	Msa0714930:CDS	40.0%
	GAATGAACCTAGTTTCTGAG+AGG	+	chr5_1:7770291-7770310	None:intergenic	40.0%
	AGGTTCATTCCTAAGTCCAA+AGG	-	chr5_1:7770301-7770320	Msa0714930:CDS	40.0%
!	AGTTTGGTTCCTTTGGACTT+AGG	+	chr5_1:7770313-7770332	None:intergenic	40.0%
!	TCTCTGTAGTTTGGTTCCTT+TGG	+	chr5_1:7770320-7770339	None:intergenic	40.0%
	ACATTGAAAACCAAAAGGGG+TGG	-	chr5_1:7770345-7770364	Msa0714930:CDS	40.0%
	CTGATATTGCTGCTAGTTGT+TGG	+	chr5_1:7770395-7770414	None:intergenic	40.0%
	ATTGTCCTTCCACTGTTGAA+GGG	+	chr5_1:7770446-7770465	None:intergenic	40.0%
	TATTGTCCTTCCACTGTTGA+AGG	+	chr5_1:7770447-7770466	None:intergenic	40.0%
	TCTGCATCATCCCATTTAGA+AGG	+	chr5_1:7770470-7770489	None:intergenic	40.0%
	TGTAGTCCAGTTTCTTCTTC+AGG	-	chr5_1:7770500-7770519	Msa0714930:intron	40.0%
	ACATAGCCTGAAGAAGAAAC+TGG	+	chr5_1:7770509-7770528	None:intergenic	40.0%
	GAGTAGTAAGTTGTTCCTTG+TGG	+	chr5_1:7770575-7770594	None:intergenic	40.0%
!	TCCTTTTACAACTGGTGTGT+TGG	-	chr5_1:7770658-7770677	Msa0714930:intron	40.0%
	GGACCATACAAATTGTCATG+TGG	+	chr5_1:7770716-7770735	None:intergenic	40.0%
!	GAAGTTCTAGTCTTCTCAGT+TGG	-	chr5_1:7770862-7770881	Msa0714930:CDS	40.0%
	TACTAAACGTTTAGGGGACT+TGG	+	chr5_1:7771065-7771084	None:intergenic	40.0%
	TGGATTCATGGCCAAAATTG+GGG	+	chr5_1:7771221-7771240	None:intergenic	40.0%
	GTTAGAGATCAAAGATGTGC+AGG	-	chr5_1:7771261-7771280	Msa0714930:intron	40.0%
	TAGCTTGGATGCATAACTCT+TGG	+	chr5_1:7771317-7771336	None:intergenic	40.0%
	TCCAAGCTAAGCTCTTTCAA+TGG	-	chr5_1:7771328-7771347	Msa0714930:intron	40.0%
	ACCATTGAAAGAGCTTAGCT+TGG	+	chr5_1:7771332-7771351	None:intergenic	40.0%
	CAATATCCAAACCTGAAGCT+TGG	+	chr5_1:7771384-7771403	None:intergenic	40.0%
	GGAGAGTTTGCAAAAAGCAA+AGG	-	chr5_1:7771575-7771594	Msa0714930:CDS	40.0%
	AAGCTTAACACCAGTTCAAC+AGG	-	chr5_1:7771892-7771911	Msa0714930:CDS	40.0%
	ATGAGATTGATCACGGAACA+TGG	+	chr5_1:7772000-7772019	None:intergenic	40.0%
	TTCAATTCATAGGCCCTACT+TGG	-	chr5_1:7772088-7772107	Msa0714930:five_prime_UTR	40.0%
	ATACAAGCAACACGTGTGAA+AGG	+	chr5_1:7772215-7772234	None:intergenic	40.0%
	GTCACATAGTGTTTCTCAAG+AGG	-	chr5_1:7770212-7770231	Msa0714930:CDS	40.0%
	GAATGAACCTAGTTTCTGAG+AGG	+	chr5_1:7770291-7770310	None:intergenic	40.0%
	AGGTTCATTCCTAAGTCCAA+AGG	-	chr5_1:7770301-7770320	Msa0714930:CDS	40.0%
!	AGTTTGGTTCCTTTGGACTT+AGG	+	chr5_1:7770313-7770332	None:intergenic	40.0%
!	TCTCTGTAGTTTGGTTCCTT+TGG	+	chr5_1:7770320-7770339	None:intergenic	40.0%
	ACATTGAAAACCAAAAGGGG+TGG	-	chr5_1:7770345-7770364	Msa0714930:CDS	40.0%
	CTGATATTGCTGCTAGTTGT+TGG	+	chr5_1:7770395-7770414	None:intergenic	40.0%
	ATTGTCCTTCCACTGTTGAA+GGG	+	chr5_1:7770446-7770465	None:intergenic	40.0%
	TATTGTCCTTCCACTGTTGA+AGG	+	chr5_1:7770447-7770466	None:intergenic	40.0%
	TCTGCATCATCCCATTTAGA+AGG	+	chr5_1:7770470-7770489	None:intergenic	40.0%
	TGTAGTCCAGTTTCTTCTTC+AGG	-	chr5_1:7770500-7770519	Msa0714930:intron	40.0%
	ACATAGCCTGAAGAAGAAAC+TGG	+	chr5_1:7770509-7770528	None:intergenic	40.0%
	GAGTAGTAAGTTGTTCCTTG+TGG	+	chr5_1:7770575-7770594	None:intergenic	40.0%
!	TCCTTTTACAACTGGTGTGT+TGG	-	chr5_1:7770658-7770677	Msa0714930:intron	40.0%
	GGACCATACAAATTGTCATG+TGG	+	chr5_1:7770716-7770735	None:intergenic	40.0%
!	GAAGTTCTAGTCTTCTCAGT+TGG	-	chr5_1:7770862-7770881	Msa0714930:CDS	40.0%
	TACTAAACGTTTAGGGGACT+TGG	+	chr5_1:7771065-7771084	None:intergenic	40.0%
	TGGATTCATGGCCAAAATTG+GGG	+	chr5_1:7771221-7771240	None:intergenic	40.0%
	GTTAGAGATCAAAGATGTGC+AGG	-	chr5_1:7771261-7771280	Msa0714930:intron	40.0%
	TAGCTTGGATGCATAACTCT+TGG	+	chr5_1:7771317-7771336	None:intergenic	40.0%
	TCCAAGCTAAGCTCTTTCAA+TGG	-	chr5_1:7771328-7771347	Msa0714930:intron	40.0%
	ACCATTGAAAGAGCTTAGCT+TGG	+	chr5_1:7771332-7771351	None:intergenic	40.0%
	CAATATCCAAACCTGAAGCT+TGG	+	chr5_1:7771384-7771403	None:intergenic	40.0%
	GGAGAGTTTGCAAAAAGCAA+AGG	-	chr5_1:7771575-7771594	Msa0714930:CDS	40.0%
	AAGCTTAACACCAGTTCAAC+AGG	-	chr5_1:7771892-7771911	Msa0714930:CDS	40.0%
	ATGAGATTGATCACGGAACA+TGG	+	chr5_1:7772000-7772019	None:intergenic	40.0%
	TTCAATTCATAGGCCCTACT+TGG	-	chr5_1:7772088-7772107	Msa0714930:five_prime_UTR	40.0%
	ATACAAGCAACACGTGTGAA+AGG	+	chr5_1:7772215-7772234	None:intergenic	40.0%
	TCTGGTACCTCTCAGAAACT+AGG	-	chr5_1:7770281-7770300	Msa0714930:CDS	45.0%
	AGAAGACAAGCCTATGTAGC+TGG	-	chr5_1:7770413-7770432	Msa0714930:intron	45.0%
	TTTCACCCTTCAACAGTGGA+AGG	-	chr5_1:7770438-7770457	Msa0714930:intron	45.0%
	AATGGGATGATGCAGAGAGA+TGG	-	chr5_1:7770474-7770493	Msa0714930:intron	45.0%
	GTTGTTCCTTGTGGCACAAT+TGG	+	chr5_1:7770566-7770585	None:intergenic	45.0%
	GATTCCACTGCGAAATGGTT+TGG	-	chr5_1:7770610-7770629	Msa0714930:CDS	45.0%
	GCCAACACACCAGTTGTAAA+AGG	+	chr5_1:7770662-7770681	None:intergenic	45.0%
	TTGAACATCGAAGTCTGCTC+TGG	-	chr5_1:7771019-7771038	Msa0714930:CDS	45.0%
!	AGTCTCTGGAGAGCTCATTT+GGG	+	chr5_1:7771161-7771180	None:intergenic	45.0%
	CTCTCCAGAGACTGAAAATG+AGG	-	chr5_1:7771168-7771187	Msa0714930:intron	45.0%
!	TGGTCCTCATTTTCAGTCTC+TGG	+	chr5_1:7771175-7771194	None:intergenic	45.0%
	CATTAGACCGACAAATGCAG+AGG	-	chr5_1:7771742-7771761	Msa0714930:CDS	45.0%
	AGCAGCATGTTTCCAAGACT+TGG	-	chr5_1:7771915-7771934	Msa0714930:exon	45.0%
	GCAGAAGGCTATTCCAAGTA+GGG	+	chr5_1:7772104-7772123	None:intergenic	45.0%
	TGCAGAAGGCTATTCCAAGT+AGG	+	chr5_1:7772105-7772124	None:intergenic	45.0%
	TCTGGTACCTCTCAGAAACT+AGG	-	chr5_1:7770281-7770300	Msa0714930:CDS	45.0%
	AGAAGACAAGCCTATGTAGC+TGG	-	chr5_1:7770413-7770432	Msa0714930:intron	45.0%
	TTTCACCCTTCAACAGTGGA+AGG	-	chr5_1:7770438-7770457	Msa0714930:intron	45.0%
	AATGGGATGATGCAGAGAGA+TGG	-	chr5_1:7770474-7770493	Msa0714930:intron	45.0%
	GTTGTTCCTTGTGGCACAAT+TGG	+	chr5_1:7770566-7770585	None:intergenic	45.0%
	GATTCCACTGCGAAATGGTT+TGG	-	chr5_1:7770610-7770629	Msa0714930:CDS	45.0%
	GCCAACACACCAGTTGTAAA+AGG	+	chr5_1:7770662-7770681	None:intergenic	45.0%
	TTGAACATCGAAGTCTGCTC+TGG	-	chr5_1:7771019-7771038	Msa0714930:CDS	45.0%
!	AGTCTCTGGAGAGCTCATTT+GGG	+	chr5_1:7771161-7771180	None:intergenic	45.0%
	CTCTCCAGAGACTGAAAATG+AGG	-	chr5_1:7771168-7771187	Msa0714930:intron	45.0%
!	TGGTCCTCATTTTCAGTCTC+TGG	+	chr5_1:7771175-7771194	None:intergenic	45.0%
	CATTAGACCGACAAATGCAG+AGG	-	chr5_1:7771742-7771761	Msa0714930:CDS	45.0%
	AGCAGCATGTTTCCAAGACT+TGG	-	chr5_1:7771915-7771934	Msa0714930:exon	45.0%
	GCAGAAGGCTATTCCAAGTA+GGG	+	chr5_1:7772104-7772123	None:intergenic	45.0%
	TGCAGAAGGCTATTCCAAGT+AGG	+	chr5_1:7772105-7772124	None:intergenic	45.0%
	AACAATGAGCGCGGTGAATG+TGG	+	chr5_1:7769956-7769975	None:intergenic	50.0%
	TTGAGGTGGAACAATGAGCG+CGG	+	chr5_1:7769965-7769984	None:intergenic	50.0%
!	TCTCTGAGTTCCACCCCTTT+TGG	+	chr5_1:7770358-7770377	None:intergenic	50.0%
	AGTGGTCCAATTGTGCCACA+AGG	-	chr5_1:7770557-7770576	Msa0714930:intron	50.0%
	CCATTTCGCAGTGGAATCGT+AGG	+	chr5_1:7770608-7770627	None:intergenic	50.0%
	CCTACGATTCCACTGCGAAA+TGG	-	chr5_1:7770605-7770624	Msa0714930:CDS	50.0%
!	TCCACTGCGAAATGGTTTGG+TGG	-	chr5_1:7770613-7770632	Msa0714930:CDS	50.0%
	ACCACCAAACCATTTCGCAG+TGG	+	chr5_1:7770617-7770636	None:intergenic	50.0%
!	GAGAGAAGTTCTGACCACGA+AGG	+	chr5_1:7770812-7770831	None:intergenic	50.0%
	CCATGGGAATTAGGCGAAGA+CGG	+	chr5_1:7770839-7770858	None:intergenic	50.0%
!	CAGTCTCTGGAGAGCTCATT+TGG	+	chr5_1:7771162-7771181	None:intergenic	50.0%
!	AGAAGCCCAAGCTTCAGGTT+TGG	-	chr5_1:7771375-7771394	Msa0714930:CDS	50.0%
	ACATGCTGCTCCTGTTGAAC+TGG	+	chr5_1:7771905-7771924	None:intergenic	50.0%
	AACAATGAGCGCGGTGAATG+TGG	+	chr5_1:7769956-7769975	None:intergenic	50.0%
	TTGAGGTGGAACAATGAGCG+CGG	+	chr5_1:7769965-7769984	None:intergenic	50.0%
!	TCTCTGAGTTCCACCCCTTT+TGG	+	chr5_1:7770358-7770377	None:intergenic	50.0%
	AGTGGTCCAATTGTGCCACA+AGG	-	chr5_1:7770557-7770576	Msa0714930:intron	50.0%
	CCATTTCGCAGTGGAATCGT+AGG	+	chr5_1:7770608-7770627	None:intergenic	50.0%
	CCTACGATTCCACTGCGAAA+TGG	-	chr5_1:7770605-7770624	Msa0714930:CDS	50.0%
!	TCCACTGCGAAATGGTTTGG+TGG	-	chr5_1:7770613-7770632	Msa0714930:CDS	50.0%
	ACCACCAAACCATTTCGCAG+TGG	+	chr5_1:7770617-7770636	None:intergenic	50.0%
!	GAGAGAAGTTCTGACCACGA+AGG	+	chr5_1:7770812-7770831	None:intergenic	50.0%
	CCATGGGAATTAGGCGAAGA+CGG	+	chr5_1:7770839-7770858	None:intergenic	50.0%
!	CAGTCTCTGGAGAGCTCATT+TGG	+	chr5_1:7771162-7771181	None:intergenic	50.0%
!	AGAAGCCCAAGCTTCAGGTT+TGG	-	chr5_1:7771375-7771394	Msa0714930:CDS	50.0%
	ACATGCTGCTCCTGTTGAAC+TGG	+	chr5_1:7771905-7771924	None:intergenic	50.0%
	GGGTGAAACGCCAGCTACAT+AGG	+	chr5_1:7770426-7770445	None:intergenic	55.0%
	GGCGTTTCACCCTTCAACAG+TGG	-	chr5_1:7770434-7770453	Msa0714930:intron	55.0%
	CCGTCTTCGCCTAATTCCCA+TGG	-	chr5_1:7770836-7770855	Msa0714930:CDS	55.0%
	GGTACAGAAGCCCAAGCTTC+AGG	-	chr5_1:7771370-7771389	Msa0714930:CDS	55.0%
!	TGGCTTGCAAAGCAGCTGCT+TGG	+	chr5_1:7771980-7771999	None:intergenic	55.0%
	GGGTGAAACGCCAGCTACAT+AGG	+	chr5_1:7770426-7770445	None:intergenic	55.0%
	GGCGTTTCACCCTTCAACAG+TGG	-	chr5_1:7770434-7770453	Msa0714930:intron	55.0%
	CCGTCTTCGCCTAATTCCCA+TGG	-	chr5_1:7770836-7770855	Msa0714930:CDS	55.0%
	GGTACAGAAGCCCAAGCTTC+AGG	-	chr5_1:7771370-7771389	Msa0714930:CDS	55.0%
!	TGGCTTGCAAAGCAGCTGCT+TGG	+	chr5_1:7771980-7771999	None:intergenic	55.0%
	CTGTGTCGAACGCGCCTTCG+TGG	-	chr5_1:7770795-7770814	Msa0714930:CDS	65.0%
	CTGTGTCGAACGCGCCTTCG+TGG	-	chr5_1:7770795-7770814	Msa0714930:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_1	gene	7769906	7772281	7769906	ID=Msa0714930;Name=Msa0714930
chr5_1	mRNA	7769906	7772281	7769906	ID=Msa0714930-mRNA-1;Parent=Msa0714930;Name=Msa0714930-mRNA-1;_AED=0.05;_eAED=0.05;_QI=363\|1\|1\|1\|1\|1\|4\|272\|404
chr5_1	exon	7769906	7770381	7769906	ID=Msa0714930-mRNA-1:exon:3260;Parent=Msa0714930-mRNA-1
chr5_1	exon	7770564	7770648	7770564	ID=Msa0714930-mRNA-1:exon:3259;Parent=Msa0714930-mRNA-1
chr5_1	exon	7770753	7771089	7770753	ID=Msa0714930-mRNA-1:exon:3258;Parent=Msa0714930-mRNA-1
chr5_1	exon	7771330	7772281	7771330	ID=Msa0714930-mRNA-1:exon:3257;Parent=Msa0714930-mRNA-1
chr5_1	five_prime_UTR	7771919	7772281	7771919	ID=Msa0714930-mRNA-1:five_prime_utr;Parent=Msa0714930-mRNA-1
chr5_1	CDS	7771330	7771918	7771330	ID=Msa0714930-mRNA-1:cds;Parent=Msa0714930-mRNA-1
chr5_1	CDS	7770753	7771089	7770753	ID=Msa0714930-mRNA-1:cds;Parent=Msa0714930-mRNA-1
chr5_1	CDS	7770564	7770648	7770564	ID=Msa0714930-mRNA-1:cds;Parent=Msa0714930-mRNA-1
chr5_1	CDS	7770178	7770381	7770178	ID=Msa0714930-mRNA-1:cds;Parent=Msa0714930-mRNA-1
chr5_1	three_prime_UTR	7769906	7770177	7769906	ID=Msa0714930-mRNA-1:three_prime_utr;Parent=Msa0714930-mRNA-1

Gene Sequence

>Msa0714930

ATGAAAAAGAATTCTGGTACCTCTCAGAAACTAGGTTCATTCCTAAGTCCAAAGGAACCAAACTACAGAGAAAAAAACATTGAAAACCAAAAGGGGTGGAACTCAGAGAGAGTATTGTTGCATCCAACAACTAGCAGCAATATCAGAAGACAAGCCTATGTAGCTGGCGTTTCACCCTTCAACAGTGGAAGGACAATACCTTCTAAATGGGATGATGCAGAGAGATGGATTTGTAGTCCAGTTTCTTCTTCAGGCTATGTTCAACATCAGAGAAATCCCAAATCAAAAAGTGGTCCAATTGTGCCACAAGGAACAACTTACTACTCCAATTTTTCACCTACGATTCCACTGCGAAATGGTTTGGTGGTGAAAAACTTAATGATGAGTTCTCCTTTTACAACTGGTGTGTTGGCACCAGATATTGTTTCTCTTCAACATTATTATCCACATGACAATTTGTATGGTCCACGTTATGACATTGATGATAATAGTTCAGTGGTTAATGAGAATGGTGTTGCTCGTACATCTGTGTCGAACGCGCCTTCGTGGTCAGAACTTCTCTCTGATCCGTCTTCGCCTAATTCCCATGATGAGAAATGTGATGGGACTACGACTGTGATGTCTCCTATGTCAAAAATTGATAAAGGTACCCAAATGAGCTCTCCAGAGACTGAAAATGAGGACCATTCATCTCCAAAATCTTCTTCATCCCCAATTTTGGCCATGAATCCAAAAAGTTGCCATTCAGAAAAGTTAGAGATCAAAGATGTGCAGGTAGACTGTCAAGCTAATGTTATTAAGTGGTCCAAGAGTTATGCATCCAAGCTAAGCTCTTTCAATGGTAAAGAGTTGAAGAAAAGTGGTACAGAAGCCCAAGCTTCAGGTTTGGATATTGCAGAGACAACATCAGACACTTCCAGTTCCAAGTTTGAGAGAGATGATGAAGCTAAAATCATTGCATGGGAGAGTTTGCAAAAAGCAAAGGCTGAAGCTGCAATTAGAAAACTTGAGATGAAATTGGAAAAGAAGAAATCGTCATCAATGGATAAGATTCTAAACAAACTGAGAAGAGCACAGATGAAAGCTGAAAAGATGAGAAGCTTAACACCAGTTCAACAGGAGCAGCATGTTTCCAAGACTTGGAAAGTATTTTCATTCACCAAATATGGCAAAATATGGTCTCCAAGCAGCTGCTTTGCAAGCCATGTTCCGTGA

Protein sequence

>Msa0714930

MKKNSGTSQKLGSFLSPKEPNYREKNIENQKGWNSERVLLHPTTSSNIRRQAYVAGVSPFNSGRTIPSKWDDAERWICSPVSSSGYVQHQRNPKSKSGPIVPQGTTYYSNFSPTIPLRNGLVVKNLMMSSPFTTGVLAPDIVSLQHYYPHDNLYGPRYDIDDNSSVVNENGVARTSVSNAPSWSELLSDPSSPNSHDEKCDGTTTVMSPMSKIDKGTQMSSPETENEDHSSPKSSSSPILAMNPKSCHSEKLEIKDVQVDCQANVIKWSKSYASKLSSFNGKELKKSGTEAQASGLDIAETTSDTSSSKFERDDEAKIIAWESLQKAKAEAAIRKLEMKLEKKKSSSMDKILNKLRRAQMKAEKMRSLTPVQQEQHVSKTWKVFSFTKYGKIWSPSSCFASHVP*