Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472620 | XP_003602435.1 | 96.394 | 416 | 11 | 2 | 1 | 412 | 1 | 416 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472620 | sp|Q9FLU1|BIN4_ARATH | 63.934 | 183 | 55 | 4 | 228 | 409 | 271 | 443 | 1.27e-63 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472620 | G7J9P4 | 96.394 | 416 | 11 | 2 | 1 | 412 | 1 | 416 | 0.0 | 797 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032090 | Msa0472620 | 0.807793 | 4.248194e-50 | -8.615850e-47 |
| Msa0032430 | Msa0472620 | 0.824967 | 6.056391e-54 | -8.615850e-47 |
| Msa0061290 | Msa0472620 | 0.810162 | 1.322041e-50 | -8.615850e-47 |
| Msa0070700 | Msa0472620 | 0.801782 | 7.652561e-49 | -8.615850e-47 |
| Msa0079380 | Msa0472620 | 0.812507 | 4.095841e-51 | -8.615850e-47 |
| Msa0105370 | Msa0472620 | 0.806588 | 7.648780e-50 | -8.615850e-47 |
| Msa0115080 | Msa0472620 | 0.816812 | 4.558908e-52 | -8.615850e-47 |
| Msa0118590 | Msa0472620 | 0.806003 | 1.015708e-49 | -8.615850e-47 |
| Msa0144370 | Msa0472620 | 0.806644 | 7.442094e-50 | -8.615850e-47 |
| Msa0152350 | Msa0472620 | 0.803813 | 2.914821e-49 | -8.615850e-47 |
| Msa0170200 | Msa0472620 | 0.806376 | 8.476292e-50 | -8.615850e-47 |
| Msa0172070 | Msa0472620 | 0.822388 | 2.433015e-53 | -8.615850e-47 |
| Msa0449210 | Msa0472620 | 0.801517 | 8.676424e-49 | -8.615850e-47 |
| Msa0472550 | Msa0472620 | 0.971308 | 5.841331e-133 | -8.615850e-47 |
| Msa0472620 | Msa0517070 | 0.920097 | 1.968496e-87 | -8.615850e-47 |
| Msa0472620 | Msa0649050 | 0.802205 | 6.265381e-49 | -8.615850e-47 |
| Msa0472620 | Msa0891710 | 0.803363 | 3.613056e-49 | -8.615850e-47 |
| Msa0472620 | Msa1012740 | 0.819462 | 1.146794e-52 | -8.615850e-47 |
| Msa0472620 | Msa1148910 | 0.813444 | 2.552175e-51 | -8.615850e-47 |
| Msa0472620 | Msa1170670 | 0.970562 | 8.316074e-132 | -8.615850e-47 |
| Msa0472620 | Msa1298220 | 0.809459 | 1.872859e-50 | -8.615850e-47 |
| Msa0472620 | Msa1382620 | 0.800680 | 1.286689e-48 | -8.615850e-47 |
| Msa0472620 | Msa1390440 | 0.819100 | 1.386650e-52 | -8.615850e-47 |
| Msa0472620 | Msa1405930 | 0.971081 | 1.321878e-132 | -8.615850e-47 |
| Msa0472620 | Msa1440310 | 0.805893 | 1.071561e-49 | -8.615850e-47 |
| Msa0240900 | Msa0472620 | 0.801459 | 8.916897e-49 | -8.615850e-47 |
| Msa0258390 | Msa0472620 | 0.852132 | 5.643127e-61 | -8.615850e-47 |
| Msa0297610 | Msa0472620 | 0.836518 | 8.929760e-57 | -8.615850e-47 |
| Msa0335730 | Msa0472620 | 0.870181 | 1.771180e-66 | -8.615850e-47 |
| Msa0357900 | Msa0472620 | 0.802444 | 5.593800e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472620 | MtrunA17_Chr3g0128321 | 96.394 | 416 | 11 | 2 | 1 | 412 | 1 | 416 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472620 | AT5G24630.5 | 59.804 | 204 | 70 | 5 | 208 | 409 | 242 | 435 | 1.72e-65 | 216 |
| Msa0472620 | AT5G24630.12 | 63.934 | 183 | 55 | 4 | 228 | 409 | 225 | 397 | 3.81e-65 | 214 |
| Msa0472620 | AT5G24630.11 | 63.934 | 183 | 55 | 4 | 228 | 409 | 225 | 397 | 3.81e-65 | 214 |
| Msa0472620 | AT5G24630.8 | 63.934 | 183 | 55 | 4 | 228 | 409 | 225 | 397 | 3.81e-65 | 214 |
| Msa0472620 | AT5G24630.10 | 63.934 | 183 | 55 | 4 | 228 | 409 | 261 | 433 | 7.85e-65 | 214 |
| Msa0472620 | AT5G24630.2 | 63.934 | 183 | 55 | 4 | 228 | 409 | 249 | 421 | 9.29e-65 | 214 |
| Msa0472620 | AT5G24630.9 | 63.934 | 183 | 55 | 4 | 228 | 409 | 265 | 437 | 1.14e-64 | 214 |
| Msa0472620 | AT5G24630.4 | 63.934 | 183 | 55 | 4 | 228 | 409 | 267 | 439 | 1.20e-64 | 214 |
| Msa0472620 | AT5G24630.7 | 63.934 | 183 | 55 | 4 | 228 | 409 | 267 | 439 | 1.20e-64 | 214 |
| Msa0472620 | AT5G24630.3 | 63.934 | 183 | 55 | 4 | 228 | 409 | 267 | 439 | 1.20e-64 | 214 |
| Msa0472620 | AT5G24630.1 | 63.934 | 183 | 55 | 4 | 228 | 409 | 268 | 440 | 1.23e-64 | 214 |
| Msa0472620 | AT5G24630.6 | 63.934 | 183 | 55 | 4 | 228 | 409 | 271 | 443 | 1.29e-64 | 214 |
Find 111 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCACTACCCTTGTTCTTAT+TGG | 0.135839 | 3_3:+75026683 | None:intergenic |
| GCTTTCTTCTTTGCTGTCTT+TGG | 0.190175 | 3_3:+75023844 | None:intergenic |
| GAAGACTGCACACCAGTAAA+AGG | 0.264190 | 3_3:-75025999 | Msa0472620:CDS |
| CTTTCTTTGACTCATTTCTT+AGG | 0.266328 | 3_3:+75023799 | None:intergenic |
| TTATTATGTTCCTCATTATC+AGG | 0.269735 | 3_3:-75023584 | Msa0472620:three_prime_UTR |
| CATAGATCTGAGTGGTGATA+TGG | 0.271690 | 3_3:-75025223 | Msa0472620:CDS |
| GACAGTGTCACCGGCGAATT+AGG | 0.285567 | 3_3:+75026804 | None:intergenic |
| TTTCTTAGGCTTTGCCCTCT+TGG | 0.289065 | 3_3:+75023813 | None:intergenic |
| CGGAAAATCTCCATCCAAAA+AGG | 0.297047 | 3_3:-75026060 | Msa0472620:CDS |
| TTATTGGCCTTAAGATTCTT+AGG | 0.303993 | 3_3:+75026699 | None:intergenic |
| AGATTGGTTGCGTTCTTATC+AGG | 0.332376 | 3_3:-75026971 | Msa0472620:intron |
| TGATAATGAGGAACATAATA+AGG | 0.341133 | 3_3:+75023586 | None:intergenic |
| AAATTCTCCTGCTCGGGGTT+TGG | 0.345340 | 3_3:+75023644 | None:intergenic |
| TGTTTATGAAGCTGAAACTA+TGG | 0.348887 | 3_3:-75024286 | Msa0472620:CDS |
| GGCTTTGCCCTCTTGGAACT+TGG | 0.354261 | 3_3:+75023820 | None:intergenic |
| CATATCACCACTCAGATCTA+TGG | 0.355840 | 3_3:+75025224 | None:intergenic |
| GAAACTAAACCTCAACCTTC+TGG | 0.374230 | 3_3:-75026107 | Msa0472620:CDS |
| AGATTCCCCGTCCGGGGATC+AGG | 0.383118 | 3_3:-75025175 | Msa0472620:CDS |
| TTTATGCTCTGCTTCCTTGT+CGG | 0.385678 | 3_3:+75026382 | None:intergenic |
| GTGTACAGTTTCTTTCTTGT+GGG | 0.388627 | 3_3:+75026600 | None:intergenic |
| TTAAGATTCTTAGGTGACTT+AGG | 0.394502 | 3_3:+75026708 | None:intergenic |
| ATTCTTACATTAGGTACAAC+AGG | 0.403661 | 3_3:+75025775 | None:intergenic |
| CGATTTACCATCTCTGTCAT+TGG | 0.404669 | 3_3:+75023700 | None:intergenic |
| CACAATGAGTGTATCGAAAC+AGG | 0.406956 | 3_3:+75023561 | None:intergenic |
| GACATACAACGCAAAACGTC+CGG | 0.449657 | 3_3:+75024715 | None:intergenic |
| AAAACAAAGGTTAATGCAAA+GGG | 0.449941 | 3_3:-75025972 | Msa0472620:CDS |
| ATTATCTCAGATTCCCCGTC+CGG | 0.450226 | 3_3:-75025183 | Msa0472620:CDS |
| CCTCAACCTTCTGGTGAAGA+TGG | 0.453566 | 3_3:-75026098 | Msa0472620:CDS |
| CAGCTCCCACATTGAATGAA+TGG | 0.455114 | 3_3:+75026193 | None:intergenic |
| ACCTTTATGACGGAGGGAAA+AGG | 0.461841 | 3_3:+75027265 | None:intergenic |
| TGATAAGAACGCAACCAATC+TGG | 0.466147 | 3_3:+75026973 | None:intergenic |
| CGTGTACAGTTTCTTTCTTG+TGG | 0.470835 | 3_3:+75026599 | None:intergenic |
| AACTGAAGATCATATTGATC+AGG | 0.477695 | 3_3:-75026132 | Msa0472620:CDS |
| CTGGAGATAGTTCGCCAGAT+TGG | 0.481862 | 3_3:-75026987 | Msa0472620:CDS |
| TTATCTCAGATTCCCCGTCC+GGG | 0.484353 | 3_3:-75025182 | Msa0472620:CDS |
| TAAGTCACCTAAGAATCTTA+AGG | 0.484727 | 3_3:-75026706 | Msa0472620:CDS |
| CCATCTTCACCAGAAGGTTG+AGG | 0.485121 | 3_3:+75026098 | None:intergenic |
| GAAGCTGAAACTATGGTTGA+AGG | 0.487381 | 3_3:-75024279 | Msa0472620:intron |
| ATAGATCTGAGTGGTGATAT+GGG | 0.488389 | 3_3:-75025222 | Msa0472620:CDS |
| GTACTATGATGCAGGAAAGA+AGG | 0.488549 | 3_3:-75026435 | Msa0472620:intron |
| TTTGATTCTGACGAGGAAGA+TGG | 0.492638 | 3_3:-75024101 | Msa0472620:CDS |
| CAATGACAGAGATGGTAAAT+CGG | 0.497969 | 3_3:-75023699 | Msa0472620:three_prime_UTR |
| ATGTGAAAAGGGACATTGGA+TGG | 0.498992 | 3_3:-75024131 | Msa0472620:intron |
| CAGGCTCTTGTTGAGTGTCA+AGG | 0.504953 | 3_3:-75025252 | Msa0472620:CDS |
| ACATTTCCTGATCCCCGGAC+GGG | 0.507819 | 3_3:+75025169 | None:intergenic |
| CGAAATGGGACAGGTGGTGA+TGG | 0.508948 | 3_3:-75025835 | Msa0472620:intron |
| GTGATATGGGAGCTGTAGGG+AGG | 0.516201 | 3_3:-75025209 | Msa0472620:CDS |
| CTGACGAGGAAGATGGTAAG+AGG | 0.521899 | 3_3:-75024094 | Msa0472620:CDS |
| AGACACCTGGTAAATCCAAA+AGG | 0.527784 | 3_3:-75024025 | Msa0472620:CDS |
| ATCTTCCTCGTCAGAATCAA+AGG | 0.528675 | 3_3:+75024103 | None:intergenic |
| TTTCATGTGAAAAGGGACAT+TGG | 0.535477 | 3_3:-75024135 | Msa0472620:intron |
| GAAAACAAAGGTTAATGCAA+AGG | 0.535733 | 3_3:-75025973 | Msa0472620:CDS |
| AAGACTGCACACCAGTAAAA+GGG | 0.542093 | 3_3:-75025998 | Msa0472620:CDS |
| AAGGTTAATGCAAAGGGGAA+AGG | 0.542305 | 3_3:-75025966 | Msa0472620:intron |
| TACAGTTTCTTTCTTGTGGG+TGG | 0.543570 | 3_3:+75026603 | None:intergenic |
| TCTGGTGAAGATGGACTTCG+TGG | 0.547152 | 3_3:-75026089 | Msa0472620:CDS |
| CTAATTACCTTTATGACGGA+GGG | 0.548331 | 3_3:+75027259 | None:intergenic |
| TCGAAACAGGCCTGATAATG+AGG | 0.550571 | 3_3:+75023574 | None:intergenic |
| GATGGACTTCGTGGCAATGA+CGG | 0.550838 | 3_3:-75026080 | Msa0472620:CDS |
| ACAACGCAAAACGTCCGGCT+AGG | 0.551306 | 3_3:+75024720 | None:intergenic |
| AGTGGTGATATGGGAGCTGT+AGG | 0.551651 | 3_3:-75025213 | Msa0472620:CDS |
| ATTCTTACCAAACCCCGAGC+AGG | 0.555541 | 3_3:-75023651 | Msa0472620:three_prime_UTR |
| CATTTCCTGATCCCCGGACG+GGG | 0.562368 | 3_3:+75025170 | None:intergenic |
| AGATCTAATTACCTTTATGA+CGG | 0.566384 | 3_3:+75027255 | None:intergenic |
| GGTAAATGAAGATGAGAAAG+CGG | 0.573759 | 3_3:+75027026 | None:intergenic |
| CACATTTCCTGATCCCCGGA+CGG | 0.578180 | 3_3:+75025168 | None:intergenic |
| GAATCAGATGACAGTGTCAC+CGG | 0.579458 | 3_3:+75026795 | None:intergenic |
| AGAAAGCTCCAAGTTCCAAG+AGG | 0.587132 | 3_3:-75023828 | Msa0472620:CDS |
| CTGTATGAAGTCGTTCATGA+TGG | 0.587502 | 3_3:+75024326 | None:intergenic |
| TAAGCACATTTCCTGATCCC+CGG | 0.588249 | 3_3:+75025164 | None:intergenic |
| CACGCTGAGGAACAGACACC+TGG | 0.588572 | 3_3:-75024038 | Msa0472620:CDS |
| CAGGGTGCTGAAAAGAAAAG+AGG | 0.588839 | 3_3:-75023892 | Msa0472620:CDS |
| CTTTGGGCAGACAGAGGCAA+AGG | 0.589063 | 3_3:-75024549 | Msa0472620:intron |
| TCTAATTACCTTTATGACGG+AGG | 0.590426 | 3_3:+75027258 | None:intergenic |
| GCTATGATCACGACATGACT+CGG | 0.590906 | 3_3:+75026160 | None:intergenic |
| TCTTAAGGCCAATAAGAACA+AGG | 0.596455 | 3_3:-75026691 | Msa0472620:CDS |
| GGTGCCCACTCCTAATTCGC+CGG | 0.598921 | 3_3:-75026814 | Msa0472620:CDS |
| ACTTTCTCAGAAAGCATCAA+AGG | 0.599098 | 3_3:+75025590 | None:intergenic |
| GCGACTATCATGTAAATACT+CGG | 0.599318 | 3_3:+75026773 | None:intergenic |
| TATCTCAGATTCCCCGTCCG+GGG | 0.600901 | 3_3:-75025181 | Msa0472620:CDS |
| ACCTGGTAAATCCAAAAGGA+AGG | 0.601971 | 3_3:-75024021 | Msa0472620:CDS |
| AAGCATCAAAGGCAATATTG+AGG | 0.602144 | 3_3:+75025601 | None:intergenic |
| GTGGTGATATGGGAGCTGTA+GGG | 0.605513 | 3_3:-75025212 | Msa0472620:CDS |
| GAAATGTGCTTAGATTTGAA+AGG | 0.606376 | 3_3:-75025153 | Msa0472620:intron |
| GAAAGCTCCAAGTTCCAAGA+GGG | 0.606806 | 3_3:-75023827 | Msa0472620:CDS |
| TCAGCTTCATAAACATCAGA+CGG | 0.609363 | 3_3:+75024294 | None:intergenic |
| CGAAGTCCATCTTCACCAGA+AGG | 0.616356 | 3_3:+75026092 | None:intergenic |
| AAAGAAACTGTACACGCGGA+AGG | 0.621325 | 3_3:-75026592 | Msa0472620:CDS |
| AGGAATCCATTCATTCAATG+TGG | 0.621403 | 3_3:-75026199 | Msa0472620:CDS |
| AAACATCTATAGTTCCTAGC+CGG | 0.625002 | 3_3:-75024734 | Msa0472620:CDS |
| TGATATGGGAGCTGTAGGGA+GGG | 0.625544 | 3_3:-75025208 | Msa0472620:CDS |
| GGAATCCATTCATTCAATGT+GGG | 0.629446 | 3_3:-75026198 | Msa0472620:CDS |
| CAATTTACCAATGACAGAGA+TGG | 0.633181 | 3_3:-75023707 | Msa0472620:three_prime_UTR |
| TTTATGACGGAGGGAAAAGG+CGG | 0.633259 | 3_3:+75027268 | None:intergenic |
| GGTTAGCTTTGGGCAGACAG+AGG | 0.635444 | 3_3:-75024555 | Msa0472620:CDS |
| CAAGAAAGAAACTGTACACG+CGG | 0.635708 | 3_3:-75026596 | Msa0472620:CDS |
| CTATGATGCAGGAAAGAAGG+AGG | 0.639245 | 3_3:-75026432 | Msa0472620:intron |
| CATCAAAGGCAATATTGAGG+AGG | 0.641549 | 3_3:+75025604 | None:intergenic |
| TGTCACCGGCGAATTAGGAG+TGG | 0.641843 | 3_3:+75026809 | None:intergenic |
| GTCACCGGCGAATTAGGAGT+GGG | 0.658496 | 3_3:+75026810 | None:intergenic |
| CTTAAGGCCAATAAGAACAA+GGG | 0.659601 | 3_3:-75026690 | Msa0472620:CDS |
| TGAGAAAGTTCATCGCACAA+AGG | 0.671129 | 3_3:-75025576 | Msa0472620:intron |
| TTATGACGGAGGGAAAAGGC+GGG | 0.671583 | 3_3:+75027269 | None:intergenic |
| AAGGAAGGCGGACAAAACAT+CGG | 0.672092 | 3_3:-75024006 | Msa0472620:intron |
| AGTAAAAGGGAAGAAAACAA+AGG | 0.673109 | 3_3:-75025985 | Msa0472620:CDS |
| TGATCAAAACGAGCACGCTG+AGG | 0.690459 | 3_3:-75024051 | Msa0472620:CDS |
| GCTTCATAAACATCAGACGG+TGG | 0.691289 | 3_3:+75024297 | None:intergenic |
| TGGTAAATCCAAAAGGAAGG+CGG | 0.692323 | 3_3:-75024018 | Msa0472620:CDS |
| GCTCGATTCAGACACCGACA+AGG | 0.693845 | 3_3:-75026396 | Msa0472620:CDS |
| AAACAAAGGTTAATGCAAAG+GGG | 0.698410 | 3_3:-75025971 | Msa0472620:CDS |
| GGTGACTCCATAGATCTGAG+TGG | 0.759776 | 3_3:-75025231 | Msa0472620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAACTTTTAAGAAAAAA+AGG | - | chr3_3:75024873-75024892 | Msa0472620:intron | 10.0% |
| !! | ATAAGTAAATTAAATAAATG+AGG | + | chr3_3:75026373-75026392 | None:intergenic | 10.0% |
| !!! | CTTGATATTTGATTTTAATT+TGG | - | chr3_3:75024246-75024265 | Msa0472620:intron | 15.0% |
| !!! | ATATTATTTTACCGAAAAAA+AGG | - | chr3_3:75026602-75026621 | Msa0472620:CDS | 15.0% |
| !!! | TCATATTTTTTCCTTTTTTT+CGG | + | chr3_3:75026616-75026635 | None:intergenic | 15.0% |
| !!! | TTATCTTTCAGATTTTAGTT+CGG | - | chr3_3:75023618-75023637 | Msa0472620:three_prime_UTR | 20.0% |
| !!! | GCTTATAATTTTGTTTTGAA+TGG | - | chr3_3:75025407-75025426 | Msa0472620:intron | 20.0% |
| !!! | TTTTTCATGAAAAAAGGAAA+TGG | + | chr3_3:75025493-75025512 | None:intergenic | 20.0% |
| !!! | ATTTCCTTTTTTCATGAAAA+AGG | - | chr3_3:75025492-75025511 | Msa0472620:intron | 20.0% |
| !!! | ATCTTACCTGTTTTAAAAAA+AGG | - | chr3_3:75025848-75025867 | Msa0472620:intron | 20.0% |
| !!! | TCTTACCTGTTTTAAAAAAA+GGG | - | chr3_3:75025849-75025868 | Msa0472620:intron | 20.0% |
| !! | ACATTAGAACAAATATAACT+TGG | + | chr3_3:75025945-75025964 | None:intergenic | 20.0% |
| !! | AAGAAAATTACGACTTATAA+TGG | + | chr3_3:75025970-75025989 | None:intergenic | 20.0% |
| !! | AAATAAAGATTTGAACAATC+AGG | + | chr3_3:75026026-75026045 | None:intergenic | 20.0% |
| !!! | CAAATCTTTATTTTCTTTTC+AGG | - | chr3_3:75026033-75026052 | Msa0472620:CDS | 20.0% |
| !! | AAAGCAATATTTAAAAGGTA+TGG | + | chr3_3:75026196-75026215 | None:intergenic | 20.0% |
| !! | GTATGAAAGCAATATTTAAA+AGG | + | chr3_3:75026201-75026220 | None:intergenic | 20.0% |
| !! | AGTTACAGGTTAAATATTAA+TGG | + | chr3_3:75026439-75026458 | None:intergenic | 20.0% |
| !!! | TCTATTATTTTCATGTGAAA+AGG | - | chr3_3:75026658-75026677 | Msa0472620:CDS | 20.0% |
| !!! | CTATTATTTTCATGTGAAAA+GGG | - | chr3_3:75026659-75026678 | Msa0472620:CDS | 20.0% |
| ! | AGATCTAATTACCTTTATGA+CGG | + | chr3_3:75023549-75023568 | None:intergenic | 25.0% |
| ! | ATAATCACAATACAAATAGC+AGG | + | chr3_3:75024558-75024577 | None:intergenic | 25.0% |
| !!! | TATACCAAATGTTTTTGCAT+AGG | - | chr3_3:75024582-75024601 | Msa0472620:intron | 25.0% |
| !! | CAATATGATCTTCAGTTTTT+GGG | + | chr3_3:75024666-75024685 | None:intergenic | 25.0% |
| !! | TCAATATGATCTTCAGTTTT+TGG | + | chr3_3:75024667-75024686 | None:intergenic | 25.0% |
| ! | AAAACAAAGGTTAATGCAAA+GGG | - | chr3_3:75024829-75024848 | Msa0472620:intron | 25.0% |
| ! | AGAAACATGTATAAATGGTA+AGG | + | chr3_3:75024946-75024965 | None:intergenic | 25.0% |
| ! | TTTCGAGAAACATGTATAAA+TGG | + | chr3_3:75024951-75024970 | None:intergenic | 25.0% |
| ! | TTTATACATGTTTCTCGAAA+TGG | - | chr3_3:75024951-75024970 | Msa0472620:intron | 25.0% |
| ! | TTATACATGTTTCTCGAAAT+GGG | - | chr3_3:75024952-75024971 | Msa0472620:intron | 25.0% |
| ! | AACAATGTCATTCTTACATT+AGG | + | chr3_3:75025038-75025057 | None:intergenic | 25.0% |
| !! | CCATGCTGTAAAATATTTTT+AGG | + | chr3_3:75025071-75025090 | None:intergenic | 25.0% |
| !! | CCTAAAAATATTTTACAGCA+TGG | - | chr3_3:75025068-75025087 | Msa0472620:intron | 25.0% |
| !!! | TGTTTGGTTTTATAGTTGTA+TGG | - | chr3_3:75025289-75025308 | Msa0472620:intron | 25.0% |
| !!! | GTTTGGTTTTATAGTTGTAT+GGG | - | chr3_3:75025290-75025309 | Msa0472620:intron | 25.0% |
| ! | TCGAAAACATATAAATTTCG+TGG | - | chr3_3:75025365-75025384 | Msa0472620:intron | 25.0% |
| !!! | GTTTCCTTTTTCATGAAAAA+AGG | + | chr3_3:75025499-75025518 | None:intergenic | 25.0% |
| ! | AAAATAGCTAAGCTGTATTA+TGG | + | chr3_3:75025777-75025796 | None:intergenic | 25.0% |
| !!! | AGATTCCCTTTTTTTAAAAC+AGG | + | chr3_3:75025857-75025876 | None:intergenic | 25.0% |
| ! | GAAATCAAAATGTCAAAAAG+AGG | + | chr3_3:75025918-75025937 | None:intergenic | 25.0% |
| !! | TTTCTTCTTCTTTTTCTTTC+AGG | - | chr3_3:75026225-75026244 | Msa0472620:intron | 25.0% |
| ! | AAGTAAAATCTAGACAACAA+CGG | + | chr3_3:75026279-75026298 | None:intergenic | 25.0% |
| ! | TCTATCTGAAAATAAGTTAC+AGG | + | chr3_3:75026453-75026472 | None:intergenic | 25.0% |
| !!! | TGTAACTTATTTTCAGATAG+AGG | - | chr3_3:75026452-75026471 | Msa0472620:intron | 25.0% |
| ! | TAAAATCCTCAGTTAATTGT+TGG | + | chr3_3:75026561-75026580 | None:intergenic | 25.0% |
| !! | ATAATATTTAAAGCAGCACT+AGG | + | chr3_3:75026589-75026608 | None:intergenic | 25.0% |
| ! | AAGAAAAGAGGTAAAAATAC+TGG | - | chr3_3:75026921-75026940 | Msa0472620:intron | 25.0% |
| !!! | TATTTTTAAATTCTCCTGCT+CGG | + | chr3_3:75027167-75027186 | None:intergenic | 25.0% |
| !! | TGATAATGAGGAACATAATA+AGG | + | chr3_3:75027218-75027237 | None:intergenic | 25.0% |
| ! | TTATTATGTTCCTCATTATC+AGG | - | chr3_3:75027217-75027236 | Msa0472620:intron | 25.0% |
| GAACGAAAAACAAGTGTATA+AGG | + | chr3_3:75023740-75023759 | None:intergenic | 30.0% | |
| TTGTGCAATACTAACATCAT+TGG | - | chr3_3:75023940-75023959 | Msa0472620:intron | 30.0% | |
| !! | TTACACATTTTTGTGCTACT+AGG | - | chr3_3:75023966-75023985 | Msa0472620:intron | 30.0% |
| TTAAGATTCTTAGGTGACTT+AGG | + | chr3_3:75024096-75024115 | None:intergenic | 30.0% | |
| TAAGTCACCTAAGAATCTTA+AGG | - | chr3_3:75024095-75024114 | Msa0472620:CDS | 30.0% | |
| !! | TTATTGGCCTTAAGATTCTT+AGG | + | chr3_3:75024105-75024124 | None:intergenic | 30.0% |
| GTAAAAATAACACTCTCGAA+TGG | + | chr3_3:75024332-75024351 | None:intergenic | 30.0% | |
| CTAACATTTAAAGATGCGAT+GGG | + | chr3_3:75024451-75024470 | None:intergenic | 30.0% | |
| ATTGTGTCAAAAATATGGGT+TGG | - | chr3_3:75024526-75024545 | Msa0472620:intron | 30.0% | |
| !!! | TCAAAAATATGGGTTGGTTT+TGG | - | chr3_3:75024532-75024551 | Msa0472620:intron | 30.0% |
| GATTCCTATGCAAAAACATT+TGG | + | chr3_3:75024589-75024608 | None:intergenic | 30.0% | |
| AACTGAAGATCATATTGATC+AGG | - | chr3_3:75024669-75024688 | Msa0472620:intron | 30.0% | |
| !! | TTTGTTTTCTTCCCTTTTAC+TGG | + | chr3_3:75024817-75024836 | None:intergenic | 30.0% |
| AGTAAAAGGGAAGAAAACAA+AGG | - | chr3_3:75024816-75024835 | Msa0472620:intron | 30.0% | |
| GAAAACAAAGGTTAATGCAA+AGG | - | chr3_3:75024828-75024847 | Msa0472620:intron | 30.0% | |
| AAACAAAGGTTAATGCAAAG+GGG | - | chr3_3:75024830-75024849 | Msa0472620:intron | 30.0% | |
| CATGCATATGGATATGAAAT+AGG | - | chr3_3:75024915-75024934 | Msa0472620:intron | 30.0% | |
| ATTCTTACATTAGGTACAAC+AGG | + | chr3_3:75025029-75025048 | None:intergenic | 30.0% | |
| TTGTTCATGTATCAAAGTGA+CGG | + | chr3_3:75025094-75025113 | None:intergenic | 30.0% | |
| AAAACCAAACATGTAGCAAA+GGG | + | chr3_3:75025280-75025299 | None:intergenic | 30.0% | |
| TAAAACCAAACATGTAGCAA+AGG | + | chr3_3:75025281-75025300 | None:intergenic | 30.0% | |
| CATGTTTAAATACTACCACA+GGG | - | chr3_3:75025314-75025333 | Msa0472620:intron | 30.0% | |
| GAAATGTGCTTAGATTTGAA+AGG | - | chr3_3:75025648-75025667 | Msa0472620:intron | 30.0% | |
| !! | ACACTACTTTTGTCTAATAG+TGG | - | chr3_3:75025993-75026012 | Msa0472620:CDS | 30.0% |
| AAAGATTTGAACAATCAGGT+AGG | + | chr3_3:75026022-75026041 | None:intergenic | 30.0% | |
| GTAATCTGCATTTATCATCA+CGG | - | chr3_3:75026118-75026137 | Msa0472620:CDS | 30.0% | |
| AAGGTATGGTATCTTAATCA+TGG | + | chr3_3:75026182-75026201 | None:intergenic | 30.0% | |
| !!! | TTTTTCTTTCAGGTTAGCTT+TGG | - | chr3_3:75026235-75026254 | Msa0472620:intron | 30.0% |
| !!! | TTTTCTTTCAGGTTAGCTTT+GGG | - | chr3_3:75026236-75026255 | Msa0472620:intron | 30.0% |
| TAAATATGTCCGAATACATC+TGG | - | chr3_3:75026318-75026337 | Msa0472620:intron | 30.0% | |
| AGTAGTAATCCAGATGTATT+CGG | + | chr3_3:75026330-75026349 | None:intergenic | 30.0% | |
| ! | ATTTTACAAAATCCTGGTCA+AGG | + | chr3_3:75026410-75026429 | None:intergenic | 30.0% |
| ! | GACCAGGATTTTGTAAAATA+CGG | - | chr3_3:75026411-75026430 | Msa0472620:CDS | 30.0% |
| TGTTTATGAAGCTGAAACTA+TGG | - | chr3_3:75026515-75026534 | Msa0472620:intron | 30.0% | |
| AATCTAAACCAAAAGCAACT+AGG | + | chr3_3:75026828-75026847 | None:intergenic | 30.0% | |
| ! | GTATTGATGATTGAAATTGC+TGG | - | chr3_3:75026853-75026872 | Msa0472620:intron | 30.0% |
| TTGCTGAAAATTTCGAAACA+GGG | - | chr3_3:75026891-75026910 | Msa0472620:intron | 30.0% | |
| AAAAGAGGTAAAAATACTGG+AGG | - | chr3_3:75026924-75026943 | Msa0472620:intron | 30.0% | |
| CTTTCTTTGACTCATTTCTT+AGG | + | chr3_3:75027005-75027024 | None:intergenic | 30.0% | |
| ! | ATTTTTAAATTCTCCTGCTC+GGG | + | chr3_3:75027166-75027185 | None:intergenic | 30.0% |
| ! | CTAATTACCTTTATGACGGA+GGG | + | chr3_3:75023545-75023564 | None:intergenic | 35.0% |
| TCTAATTACCTTTATGACGG+AGG | + | chr3_3:75023546-75023565 | None:intergenic | 35.0% | |
| CAAATGATCGAACAGGTAAT+GGG | + | chr3_3:75023700-75023719 | None:intergenic | 35.0% | |
| CGAAAAACAAGTGTATAAGG+AGG | + | chr3_3:75023737-75023756 | None:intergenic | 35.0% | |
| GGTAAATGAAGATGAGAAAG+CGG | + | chr3_3:75023778-75023797 | None:intergenic | 35.0% | |
| ACCTAAAAAATGAGCAGTTC+TGG | - | chr3_3:75023795-75023814 | Msa0472620:exon | 35.0% | |
| !!! | TCCAGAACTGCTCATTTTTT+AGG | + | chr3_3:75023799-75023818 | None:intergenic | 35.0% |
| ACATTGTACATCAGTTCCTA+AGG | - | chr3_3:75023912-75023931 | Msa0472620:intron | 35.0% | |
| CATTGTACATCAGTTCCTAA+GGG | - | chr3_3:75023913-75023932 | Msa0472620:intron | 35.0% | |
| TGCAATACTAACATCATTGG+TGG | - | chr3_3:75023943-75023962 | Msa0472620:intron | 35.0% | |
| GCGACTATCATGTAAATACT+CGG | + | chr3_3:75024031-75024050 | None:intergenic | 35.0% | |
| TCTTAAGGCCAATAAGAACA+AGG | - | chr3_3:75024110-75024129 | Msa0472620:CDS | 35.0% | |
| CTTAAGGCCAATAAGAACAA+GGG | - | chr3_3:75024111-75024130 | Msa0472620:CDS | 35.0% | |
| GTGTACAGTTTCTTTCTTGT+GGG | + | chr3_3:75024204-75024223 | None:intergenic | 35.0% | |
| !! | GTCATTTTGTACTATGATGC+AGG | - | chr3_3:75024358-75024377 | Msa0472620:intron | 35.0% |
| CCTAACATTTAAAGATGCGA+TGG | + | chr3_3:75024452-75024471 | None:intergenic | 35.0% | |
| CCATCGCATCTTTAAATGTT+AGG | - | chr3_3:75024449-75024468 | Msa0472620:intron | 35.0% | |
| TCGCATCTTTAAATGTTAGG+TGG | - | chr3_3:75024452-75024471 | Msa0472620:intron | 35.0% | |
| TTAGGTGGCATTTGTAGATT+TGG | - | chr3_3:75024467-75024486 | Msa0472620:intron | 35.0% | |
| TAGGTGGCATTTGTAGATTT+GGG | - | chr3_3:75024468-75024487 | Msa0472620:intron | 35.0% | |
| TTGACACAATGCGCATAATA+AGG | + | chr3_3:75024516-75024535 | None:intergenic | 35.0% | |
| TGCGCATTGTGTCAAAAATA+TGG | - | chr3_3:75024521-75024540 | Msa0472620:intron | 35.0% | |
| GCGCATTGTGTCAAAAATAT+GGG | - | chr3_3:75024522-75024541 | Msa0472620:intron | 35.0% | |
| AGGAATCCATTCATTCAATG+TGG | - | chr3_3:75024602-75024621 | Msa0472620:intron | 35.0% | |
| GGAATCCATTCATTCAATGT+GGG | - | chr3_3:75024603-75024622 | Msa0472620:intron | 35.0% | |
| CATATCCATATGCATGAAGA+TGG | + | chr3_3:75024911-75024930 | None:intergenic | 35.0% | |
| ! | AAAGCACAATTTAGAATGCC+AGG | + | chr3_3:75025155-75025174 | None:intergenic | 35.0% |
| CTTTGCTTTCTATTTGTTCC+AGG | - | chr3_3:75025171-75025190 | Msa0472620:CDS | 35.0% | |
| AAGCATCAAAGGCAATATTG+AGG | + | chr3_3:75025203-75025222 | None:intergenic | 35.0% | |
| !! | ACTTTCTCAGAAAGCATCAA+AGG | + | chr3_3:75025214-75025233 | None:intergenic | 35.0% |
| CCTGTGGTAGTATTTAAACA+TGG | + | chr3_3:75025316-75025335 | None:intergenic | 35.0% | |
| CCATGTTTAAATACTACCAC+AGG | - | chr3_3:75025313-75025332 | Msa0472620:intron | 35.0% | |
| !! | GTTTTGAATGGAACGACAAA+TGG | - | chr3_3:75025419-75025438 | Msa0472620:intron | 35.0% |
| ATAGATCTGAGTGGTGATAT+GGG | - | chr3_3:75025579-75025598 | Msa0472620:CDS | 35.0% | |
| GAGGTAATCGCTAAAAATCA+AGG | + | chr3_3:75025899-75025918 | None:intergenic | 35.0% | |
| AAACATCTATAGTTCCTAGC+CGG | - | chr3_3:75026067-75026086 | Msa0472620:CDS | 35.0% | |
| ! | TTTTGCGTTGTATGTCATCT+TGG | - | chr3_3:75026093-75026112 | Msa0472620:CDS | 35.0% |
| AGGCCAAATAGAAACTTTCA+AGG | + | chr3_3:75026144-75026163 | None:intergenic | 35.0% | |
| ! | CACCGTATTTTACAAAATCC+TGG | + | chr3_3:75026416-75026435 | None:intergenic | 35.0% |
| TCAGCTTCATAAACATCAGA+CGG | + | chr3_3:75026510-75026529 | None:intergenic | 35.0% | |
| AATCCTCAGTTAATTGTTGG+TGG | + | chr3_3:75026558-75026577 | None:intergenic | 35.0% | |
| TTTCATGTGAAAAGGGACAT+TGG | - | chr3_3:75026666-75026685 | Msa0472620:CDS | 35.0% | |
| ! | TTTTTCCTTTGATTCTGACG+AGG | - | chr3_3:75026693-75026712 | Msa0472620:CDS | 35.0% |
| !! | GTAAGTTTCCTAGTTGCTTT+TGG | - | chr3_3:75026817-75026836 | Msa0472620:intron | 35.0% |
| GTTGCTGAAAATTTCGAAAC+AGG | - | chr3_3:75026890-75026909 | Msa0472620:intron | 35.0% | |
| CAATTTACCAATGACAGAGA+TGG | - | chr3_3:75027094-75027113 | Msa0472620:intron | 35.0% | |
| CAATGACAGAGATGGTAAAT+CGG | - | chr3_3:75027102-75027121 | Msa0472620:intron | 35.0% | |
| ! | TTTTTAAATTCTCCTGCTCG+GGG | + | chr3_3:75027165-75027184 | None:intergenic | 35.0% |
| GCAAATGATCGAACAGGTAA+TGG | + | chr3_3:75023701-75023720 | None:intergenic | 40.0% | |
| AGTGAAGCAAATGATCGAAC+AGG | + | chr3_3:75023707-75023726 | None:intergenic | 40.0% | |
| TGATAAGAACGCAACCAATC+TGG | + | chr3_3:75023831-75023850 | None:intergenic | 40.0% | |
| ! | AGATTGGTTGCGTTCTTATC+AGG | - | chr3_3:75023830-75023849 | Msa0472620:CDS | 40.0% |
| GTATTGCACAACTAACCCTT+AGG | + | chr3_3:75023931-75023950 | None:intergenic | 40.0% | |
| ! | TAGTCGCAGTTTTTCTGATG+AGG | - | chr3_3:75024044-75024063 | Msa0472620:CDS | 40.0% |
| !! | CGTCTTTTTCGTTGAAGACT+TGG | + | chr3_3:75024142-75024161 | None:intergenic | 40.0% |
| GTCTTCAACGAAAAAGACGT+TGG | - | chr3_3:75024143-75024162 | Msa0472620:intron | 40.0% | |
| TCAACGAAAAAGACGTTGGA+AGG | - | chr3_3:75024147-75024166 | Msa0472620:intron | 40.0% | |
| TACAGTTTCTTTCTTGTGGG+TGG | + | chr3_3:75024201-75024220 | None:intergenic | 40.0% | |
| CGTGTACAGTTTCTTTCTTG+TGG | + | chr3_3:75024205-75024224 | None:intergenic | 40.0% | |
| CAAGAAAGAAACTGTACACG+CGG | - | chr3_3:75024205-75024224 | Msa0472620:intron | 40.0% | |
| TACACGCGGAAGGATAAAAA+TGG | - | chr3_3:75024219-75024238 | Msa0472620:intron | 40.0% | |
| GTACTATGATGCAGGAAAGA+AGG | - | chr3_3:75024366-75024385 | Msa0472620:intron | 40.0% | |
| TTTATGCTCTGCTTCCTTGT+CGG | + | chr3_3:75024422-75024441 | None:intergenic | 40.0% | |
| AGGTGGCATTTGTAGATTTG+GGG | - | chr3_3:75024469-75024488 | Msa0472620:intron | 40.0% | |
| GAAACTAAACCTCAACCTTC+TGG | - | chr3_3:75024694-75024713 | Msa0472620:intron | 40.0% | |
| CGGAAAATCTCCATCCAAAA+AGG | - | chr3_3:75024741-75024760 | Msa0472620:CDS | 40.0% | |
| !!! | GCTTTTGAAGCCTTTTTGGA+TGG | + | chr3_3:75024754-75024773 | None:intergenic | 40.0% |
| !!! | CTTCGCTTTTGAAGCCTTTT+TGG | + | chr3_3:75024758-75024777 | None:intergenic | 40.0% |
| CAAAAAGGCTTCAAAAGCGA+AGG | - | chr3_3:75024756-75024775 | Msa0472620:intron | 40.0% | |
| AAGACTGCACACCAGTAAAA+GGG | - | chr3_3:75024803-75024822 | Msa0472620:intron | 40.0% | |
| AAGGTTAATGCAAAGGGGAA+AGG | - | chr3_3:75024835-75024854 | Msa0472620:intron | 40.0% | |
| TTGCTCCATCTTCATGCATA+TGG | - | chr3_3:75024903-75024922 | Msa0472620:intron | 40.0% | |
| CATCAAAGGCAATATTGAGG+AGG | + | chr3_3:75025200-75025219 | None:intergenic | 40.0% | |
| TGAGAAAGTTCATCGCACAA+AGG | - | chr3_3:75025225-75025244 | Msa0472620:CDS | 40.0% | |
| GATTCCCTTTGCTACATGTT+TGG | - | chr3_3:75025273-75025292 | Msa0472620:intron | 40.0% | |
| AGTGAAATGCGTTACTCATC+TGG | + | chr3_3:75025344-75025363 | None:intergenic | 40.0% | |
| TGGAAGAAAAGTTGCTAGTC+TGG | - | chr3_3:75025385-75025404 | Msa0472620:intron | 40.0% | |
| !!! | ACAGAGCAGCTTTTTAGGAT+TGG | + | chr3_3:75025525-75025544 | None:intergenic | 40.0% |
| ! | GCAAAACAGAGCAGCTTTTT+AGG | + | chr3_3:75025530-75025549 | None:intergenic | 40.0% |
| ! | AAAAAGCTGCTCTGTTTTGC+AGG | - | chr3_3:75025530-75025549 | Msa0472620:intron | 40.0% |
| CATATCACCACTCAGATCTA+TGG | + | chr3_3:75025580-75025599 | None:intergenic | 40.0% | |
| CATAGATCTGAGTGGTGATA+TGG | - | chr3_3:75025578-75025597 | Msa0472620:CDS | 40.0% | |
| GTATACGCAGTGTTATCATC+AGG | + | chr3_3:75025746-75025765 | None:intergenic | 40.0% | |
| CGGCCTTGAAAGTTTCTATT+TGG | - | chr3_3:75026138-75026157 | Msa0472620:CDS | 40.0% | |
| CATGGAAGTAACTAGCTACA+AGG | + | chr3_3:75026164-75026183 | None:intergenic | 40.0% | |
| CTGTATGAAGTCGTTCATGA+TGG | + | chr3_3:75026478-75026497 | None:intergenic | 40.0% | |
| GAAGCTGAAACTATGGTTGA+AGG | - | chr3_3:75026522-75026541 | Msa0472620:intron | 40.0% | |
| CATCCACCAACAATTAACTG+AGG | - | chr3_3:75026552-75026571 | Msa0472620:intron | 40.0% | |
| ATGTGAAAAGGGACATTGGA+TGG | - | chr3_3:75026670-75026689 | Msa0472620:CDS | 40.0% | |
| ATCTTCCTCGTCAGAATCAA+AGG | + | chr3_3:75026701-75026720 | None:intergenic | 40.0% | |
| TTTGATTCTGACGAGGAAGA+TGG | - | chr3_3:75026700-75026719 | Msa0472620:CDS | 40.0% | |
| AGACACCTGGTAAATCCAAA+AGG | - | chr3_3:75026776-75026795 | Msa0472620:CDS | 40.0% | |
| ACCTGGTAAATCCAAAAGGA+AGG | - | chr3_3:75026780-75026799 | Msa0472620:CDS | 40.0% | |
| TGGTAAATCCAAAAGGAAGG+CGG | - | chr3_3:75026783-75026802 | Msa0472620:CDS | 40.0% | |
| ! | GCTTTCTTCTTTGCTGTCTT+TGG | + | chr3_3:75026960-75026979 | None:intergenic | 40.0% |
| CGATTTACCATCTCTGTCAT+TGG | + | chr3_3:75027104-75027123 | None:intergenic | 40.0% | |
| CACAATGAGTGTATCGAAAC+AGG | + | chr3_3:75027243-75027262 | None:intergenic | 40.0% | |
| ! | TTTATGACGGAGGGAAAAGG+CGG | + | chr3_3:75023536-75023555 | None:intergenic | 45.0% |
| ! | ACCTTTATGACGGAGGGAAA+AGG | + | chr3_3:75023539-75023558 | None:intergenic | 45.0% |
| GAATCAGATGACAGTGTCAC+CGG | + | chr3_3:75024009-75024028 | None:intergenic | 45.0% | |
| GGCACTACCCTTGTTCTTAT+TGG | + | chr3_3:75024121-75024140 | None:intergenic | 45.0% | |
| AAAGAAACTGTACACGCGGA+AGG | - | chr3_3:75024209-75024228 | Msa0472620:intron | 45.0% | |
| CTATGATGCAGGAAAGAAGG+AGG | - | chr3_3:75024369-75024388 | Msa0472620:intron | 45.0% | |
| CAGCTCCCACATTGAATGAA+TGG | + | chr3_3:75024611-75024630 | None:intergenic | 45.0% | |
| GCTATGATCACGACATGACT+CGG | + | chr3_3:75024644-75024663 | None:intergenic | 45.0% | |
| GAAGACTGCACACCAGTAAA+AGG | - | chr3_3:75024802-75024821 | Msa0472620:intron | 45.0% | |
| ! | CAAAGGGGAAAGGTACGAAA+TGG | - | chr3_3:75024845-75024864 | Msa0472620:intron | 45.0% |
| CATGTTTCTCGAAATGGGAC+AGG | - | chr3_3:75024957-75024976 | Msa0472620:intron | 45.0% | |
| ! | TTTAGAATGCCAGGCTGGAT+AGG | + | chr3_3:75025146-75025165 | None:intergenic | 45.0% |
| ! | CACAATTTAGAATGCCAGGC+TGG | + | chr3_3:75025151-75025170 | None:intergenic | 45.0% |
| GCAATATTGAGGAGGAAACC+TGG | + | chr3_3:75025192-75025211 | None:intergenic | 45.0% | |
| AAGTTCATCGCACAAAGGTC+AGG | - | chr3_3:75025230-75025249 | Msa0472620:CDS | 45.0% | |
| ATTATCTCAGATTCCCCGTC+CGG | - | chr3_3:75025618-75025637 | Msa0472620:intron | 45.0% | |
| TAAGCACATTTCCTGATCCC+CGG | + | chr3_3:75025640-75025659 | None:intergenic | 45.0% | |
| GACATACAACGCAAAACGTC+CGG | + | chr3_3:75026089-75026108 | None:intergenic | 45.0% | |
| GCTTCATAAACATCAGACGG+TGG | + | chr3_3:75026507-75026526 | None:intergenic | 45.0% | |
| !! | CTCGTTTTGATCAGTTGGGT+GGG | + | chr3_3:75026743-75026762 | None:intergenic | 45.0% |
| !! | CGTGCTCGTTTTGATCAGTT+GGG | + | chr3_3:75026747-75026766 | None:intergenic | 45.0% |
| ! | GCCTTCCTTTTGGATTTACC+AGG | + | chr3_3:75026784-75026803 | None:intergenic | 45.0% |
| ! | TGTTTTGTCCGCCTTCCTTT+TGG | + | chr3_3:75026794-75026813 | None:intergenic | 45.0% |
| AAGGAAGGCGGACAAAACAT+CGG | - | chr3_3:75026795-75026814 | Msa0472620:CDS | 45.0% | |
| !! | CAGGGTGCTGAAAAGAAAAG+AGG | - | chr3_3:75026909-75026928 | Msa0472620:intron | 45.0% |
| AGAAAGCTCCAAGTTCCAAG+AGG | - | chr3_3:75026973-75026992 | Msa0472620:CDS | 45.0% | |
| GAAAGCTCCAAGTTCCAAGA+GGG | - | chr3_3:75026974-75026993 | Msa0472620:CDS | 45.0% | |
| TTTCTTAGGCTTTGCCCTCT+TGG | + | chr3_3:75026991-75027010 | None:intergenic | 45.0% | |
| ! | TCGAAACAGGCCTGATAATG+AGG | + | chr3_3:75027230-75027249 | None:intergenic | 45.0% |
| ! | TTATGACGGAGGGAAAAGGC+GGG | + | chr3_3:75023535-75023554 | None:intergenic | 50.0% |
| ! | GCCTTTTCCCTCCGTCATAA+AGG | - | chr3_3:75023535-75023554 | Msa0472620:three_prime_UTR | 50.0% |
| CTGGAGATAGTTCGCCAGAT+TGG | - | chr3_3:75023814-75023833 | Msa0472620:CDS | 50.0% | |
| CCATCTTCACCAGAAGGTTG+AGG | + | chr3_3:75024706-75024725 | None:intergenic | 50.0% | |
| CCTCAACCTTCTGGTGAAGA+TGG | - | chr3_3:75024703-75024722 | Msa0472620:intron | 50.0% | |
| CGAAGTCCATCTTCACCAGA+AGG | + | chr3_3:75024712-75024731 | None:intergenic | 50.0% | |
| ! | TCTGGTGAAGATGGACTTCG+TGG | - | chr3_3:75024712-75024731 | Msa0472620:intron | 50.0% |
| ! | GATGGACTTCGTGGCAATGA+CGG | - | chr3_3:75024721-75024740 | Msa0472620:intron | 50.0% |
| GTTTCTCGAAATGGGACAGG+TGG | - | chr3_3:75024960-75024979 | Msa0472620:intron | 50.0% | |
| GGCTGGATAGGCAGTCAATA+TGG | + | chr3_3:75025134-75025153 | None:intergenic | 50.0% | |
| ! | TATTGACTGCCTATCCAGCC+TGG | - | chr3_3:75025134-75025153 | Msa0472620:intron | 50.0% |
| TTCATCGCACAAAGGTCAGG+TGG | - | chr3_3:75025233-75025252 | Msa0472620:CDS | 50.0% | |
| TACTCATCTGGTTGTCCCTG+TGG | + | chr3_3:75025332-75025351 | None:intergenic | 50.0% | |
| CAGGCTCTTGTTGAGTGTCA+AGG | - | chr3_3:75025549-75025568 | Msa0472620:intron | 50.0% | |
| GGTGACTCCATAGATCTGAG+TGG | - | chr3_3:75025570-75025589 | Msa0472620:intron | 50.0% | |
| AGTGGTGATATGGGAGCTGT+AGG | - | chr3_3:75025588-75025607 | Msa0472620:CDS | 50.0% | |
| GTGGTGATATGGGAGCTGTA+GGG | - | chr3_3:75025589-75025608 | Msa0472620:CDS | 50.0% | |
| TGATATGGGAGCTGTAGGGA+GGG | - | chr3_3:75025593-75025612 | Msa0472620:CDS | 50.0% | |
| TTATCTCAGATTCCCCGTCC+GGG | - | chr3_3:75025619-75025638 | Msa0472620:intron | 50.0% | |
| ! | GTGATTAGTCAGCCTTGACC+AGG | - | chr3_3:75026395-75026414 | Msa0472620:CDS | 50.0% |
| CTGACGAGGAAGATGGTAAG+AGG | - | chr3_3:75026707-75026726 | Msa0472620:CDS | 50.0% | |
| !! | GTTTTGATCAGTTGGGTGGG+CGG | + | chr3_3:75026740-75026759 | None:intergenic | 50.0% |
| !! | GCTCGTTTTGATCAGTTGGG+TGG | + | chr3_3:75026744-75026763 | None:intergenic | 50.0% |
| !! | GCGTGCTCGTTTTGATCAGT+TGG | + | chr3_3:75026748-75026767 | None:intergenic | 50.0% |
| TGATCAAAACGAGCACGCTG+AGG | - | chr3_3:75026750-75026769 | Msa0472620:CDS | 50.0% | |
| ATTCTTACCAAACCCCGAGC+AGG | - | chr3_3:75027150-75027169 | Msa0472620:intron | 50.0% | |
| AAATTCTCCTGCTCGGGGTT+TGG | + | chr3_3:75027160-75027179 | None:intergenic | 50.0% | |
| GTCACCGGCGAATTAGGAGT+GGG | + | chr3_3:75023994-75024013 | None:intergenic | 55.0% | |
| TGTCACCGGCGAATTAGGAG+TGG | + | chr3_3:75023995-75024014 | None:intergenic | 55.0% | |
| GACAGTGTCACCGGCGAATT+AGG | + | chr3_3:75024000-75024019 | None:intergenic | 55.0% | |
| GCTCGATTCAGACACCGACA+AGG | - | chr3_3:75024405-75024424 | Msa0472620:intron | 55.0% | |
| CGAAATGGGACAGGTGGTGA+TGG | - | chr3_3:75024966-75024985 | Msa0472620:intron | 55.0% | |
| GTGATATGGGAGCTGTAGGG+AGG | - | chr3_3:75025592-75025611 | Msa0472620:CDS | 55.0% | |
| TATCTCAGATTCCCCGTCCG+GGG | - | chr3_3:75025620-75025639 | Msa0472620:intron | 55.0% | |
| ACATTTCCTGATCCCCGGAC+GGG | + | chr3_3:75025635-75025654 | None:intergenic | 55.0% | |
| CACATTTCCTGATCCCCGGA+CGG | + | chr3_3:75025636-75025655 | None:intergenic | 55.0% | |
| ACAACGCAAAACGTCCGGCT+AGG | + | chr3_3:75026084-75026103 | None:intergenic | 55.0% | |
| !! | GGTTAGCTTTGGGCAGACAG+AGG | - | chr3_3:75026246-75026265 | Msa0472620:intron | 55.0% |
| CTTTGGGCAGACAGAGGCAA+AGG | - | chr3_3:75026252-75026271 | Msa0472620:intron | 55.0% | |
| GGCTTTGCCCTCTTGGAACT+TGG | + | chr3_3:75026984-75027003 | None:intergenic | 55.0% | |
| GGTGCCCACTCCTAATTCGC+CGG | - | chr3_3:75023987-75024006 | Msa0472620:intron | 60.0% | |
| CATTTCCTGATCCCCGGACG+GGG | + | chr3_3:75025634-75025653 | None:intergenic | 60.0% | |
| CACGCTGAGGAACAGACACC+TGG | - | chr3_3:75026763-75026782 | Msa0472620:CDS | 60.0% | |
| AGATTCCCCGTCCGGGGATC+AGG | - | chr3_3:75025626-75025645 | Msa0472620:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 75023521 | 75027302 | 75023521 | ID=Msa0472620;Name=Msa0472620 |
| chr3_3 | mRNA | 75023521 | 75027302 | 75023521 | ID=Msa0472620-mRNA-1;Parent=Msa0472620;Name=Msa0472620-mRNA-1;_AED=0.11;_eAED=0.11;_QI=74|1|1|1|0.91|0.84|13|289|412 |
| chr3_3 | exon | 75023521 | 75023911 | 75023521 | ID=Msa0472620-mRNA-1:exon:19358;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75024007 | 75024143 | 75024007 | ID=Msa0472620-mRNA-1:exon:19357;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75024280 | 75024355 | 75024280 | ID=Msa0472620-mRNA-1:exon:19356;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75024550 | 75024576 | 75024550 | ID=Msa0472620-mRNA-1:exon:19355;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75024722 | 75024768 | 75024722 | ID=Msa0472620-mRNA-1:exon:19354;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75025154 | 75025271 | 75025154 | ID=Msa0472620-mRNA-1:exon:19353;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75025577 | 75025630 | 75025577 | ID=Msa0472620-mRNA-1:exon:19352;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75025783 | 75025844 | 75025783 | ID=Msa0472620-mRNA-1:exon:19351;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75025967 | 75026219 | 75025967 | ID=Msa0472620-mRNA-1:exon:19350;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75026382 | 75026443 | 75026382 | ID=Msa0472620-mRNA-1:exon:19349;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75026583 | 75026835 | 75026583 | ID=Msa0472620-mRNA-1:exon:19348;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75026972 | 75027057 | 75026972 | ID=Msa0472620-mRNA-1:exon:19347;Parent=Msa0472620-mRNA-1 |
| chr3_3 | exon | 75027267 | 75027302 | 75027267 | ID=Msa0472620-mRNA-1:exon:19346;Parent=Msa0472620-mRNA-1 |
| chr3_3 | five_prime_UTR | 75027267 | 75027302 | 75027267 | ID=Msa0472620-mRNA-1:five_prime_utr;Parent=Msa0472620-mRNA-1 |
| chr3_3 | five_prime_UTR | 75027020 | 75027057 | 75027020 | ID=Msa0472620-mRNA-1:five_prime_utr;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75026972 | 75027019 | 75026972 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75026583 | 75026835 | 75026583 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75026382 | 75026443 | 75026382 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75025967 | 75026219 | 75025967 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75025783 | 75025844 | 75025783 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75025577 | 75025630 | 75025577 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75025154 | 75025271 | 75025154 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75024722 | 75024768 | 75024722 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75024550 | 75024576 | 75024550 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75024280 | 75024355 | 75024280 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75024007 | 75024143 | 75024007 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | CDS | 75023810 | 75023911 | 75023810 | ID=Msa0472620-mRNA-1:cds;Parent=Msa0472620-mRNA-1 |
| chr3_3 | three_prime_UTR | 75023521 | 75023809 | 75023521 | ID=Msa0472620-mRNA-1:three_prime_utr;Parent=Msa0472620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
