Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170670 | XP_003602435.1 | 96.394 | 416 | 11 | 2 | 1 | 412 | 1 | 416 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170670 | sp|Q9FLU1|BIN4_ARATH | 63.934 | 183 | 55 | 4 | 228 | 409 | 271 | 443 | 1.27e-63 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170670 | G7J9P4 | 96.394 | 416 | 11 | 2 | 1 | 412 | 1 | 416 | 0.0 | 797 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa1170670 | 0.809814 | 1.570597e-50 | -8.615850e-47 |
| Msa0029270 | Msa1170670 | 0.816554 | 5.209221e-52 | -8.615850e-47 |
| Msa0030200 | Msa1170670 | 0.800539 | 1.374790e-48 | -8.615850e-47 |
| Msa0032090 | Msa1170670 | 0.846534 | 2.045339e-59 | -8.615850e-47 |
| Msa0032430 | Msa1170670 | 0.854336 | 1.317557e-61 | -8.615850e-47 |
| Msa0032920 | Msa1170670 | -0.807469 | 4.978539e-50 | -8.615850e-47 |
| Msa0040690 | Msa1170670 | 0.809029 | 2.315134e-50 | -8.615850e-47 |
| Msa0054480 | Msa1170670 | 0.813264 | 2.795624e-51 | -8.615850e-47 |
| Msa0061290 | Msa1170670 | 0.837557 | 4.846552e-57 | -8.615850e-47 |
| Msa0070700 | Msa1170670 | 0.826980 | 2.013517e-54 | -8.615850e-47 |
| Msa0079380 | Msa1170670 | 0.851649 | 7.734450e-61 | -8.615850e-47 |
| Msa0105370 | Msa1170670 | 0.805590 | 1.240262e-49 | -8.615850e-47 |
| Msa0115080 | Msa1170670 | 0.842425 | 2.606588e-58 | -8.615850e-47 |
| Msa0118590 | Msa1170670 | 0.825435 | 4.696230e-54 | -8.615850e-47 |
| Msa0615440 | Msa1170670 | 0.812893 | 3.370501e-51 | -8.615850e-47 |
| Msa0649050 | Msa1170670 | 0.809355 | 1.971341e-50 | -8.615850e-47 |
| Msa0689260 | Msa1170670 | 0.806901 | 6.568362e-50 | -8.615850e-47 |
| Msa0698490 | Msa1170670 | 0.816437 | 5.531470e-52 | -8.615850e-47 |
| Msa0698660 | Msa1170670 | 0.810682 | 1.021047e-50 | -8.615850e-47 |
| Msa0707250 | Msa1170670 | 0.808115 | 3.629973e-50 | -8.615850e-47 |
| Msa0757830 | Msa1170670 | 0.802039 | 6.778256e-49 | -8.615850e-47 |
| Msa0833650 | Msa1170670 | 0.806654 | 7.407790e-50 | -8.615850e-47 |
| Msa0124060 | Msa1170670 | 0.819204 | 1.312764e-52 | -8.615850e-47 |
| Msa0127050 | Msa1170670 | 0.819985 | 8.711724e-53 | -8.615850e-47 |
| Msa0144370 | Msa1170670 | 0.830142 | 3.468199e-55 | -8.615850e-47 |
| Msa0152350 | Msa1170670 | 0.832104 | 1.143639e-55 | -8.615850e-47 |
| Msa0168500 | Msa1170670 | 0.815211 | 1.038537e-51 | -8.615850e-47 |
| Msa0169310 | Msa1170670 | 0.815968 | 7.044797e-52 | -8.615850e-47 |
| Msa0170200 | Msa1170670 | 0.812640 | 3.830404e-51 | -8.615850e-47 |
| Msa0172070 | Msa1170670 | 0.849629 | 2.860997e-60 | -8.615850e-47 |
| Msa0173690 | Msa1170670 | 0.801713 | 7.908121e-49 | -8.615850e-47 |
| Msa0175750 | Msa1170670 | 0.802584 | 5.233408e-49 | -8.615850e-47 |
| Msa0378720 | Msa1170670 | 0.803692 | 3.087343e-49 | -8.615850e-47 |
| Msa0385300 | Msa1170670 | 0.808277 | 3.351777e-50 | -8.615850e-47 |
| Msa0449210 | Msa1170670 | 0.825729 | 4.000109e-54 | -8.615850e-47 |
| Msa0467490 | Msa1170670 | 0.823579 | 1.283561e-53 | -8.615850e-47 |
| Msa0472550 | Msa1170670 | 0.979976 | 3.641052e-149 | -8.615850e-47 |
| Msa0472620 | Msa1170670 | 0.970562 | 8.316074e-132 | -8.615850e-47 |
| Msa1006840 | Msa1170670 | 0.800998 | 1.108005e-48 | -8.615850e-47 |
| Msa1012740 | Msa1170670 | 0.824261 | 8.884845e-54 | -8.615850e-47 |
| Msa1043690 | Msa1170670 | 0.808703 | 2.718637e-50 | -8.615850e-47 |
| Msa0258390 | Msa1170670 | 0.837596 | 4.735127e-57 | -8.615850e-47 |
| Msa0287740 | Msa1170670 | 0.809371 | 1.955621e-50 | -8.615850e-47 |
| Msa0292400 | Msa1170670 | 0.805647 | 1.206970e-49 | -8.615850e-47 |
| Msa0297610 | Msa1170670 | 0.813005 | 3.186147e-51 | -8.615850e-47 |
| Msa0335730 | Msa1170670 | 0.886114 | 4.531141e-72 | -8.615850e-47 |
| Msa0337700 | Msa1170670 | 0.800987 | 1.113700e-48 | -8.615850e-47 |
| Msa0357900 | Msa1170670 | 0.812450 | 4.214004e-51 | -8.615850e-47 |
| Msa1132840 | Msa1170670 | 0.809992 | 1.438545e-50 | -8.615850e-47 |
| Msa1148910 | Msa1170670 | 0.820948 | 5.236061e-53 | -8.615850e-47 |
| Msa1155170 | Msa1170670 | -0.823894 | 1.083497e-53 | -8.615850e-47 |
| Msa1170670 | Msa1171710 | 0.819802 | 9.590821e-53 | -8.615850e-47 |
| Msa1170670 | Msa1206460 | 0.800767 | 1.235212e-48 | -8.615850e-47 |
| Msa1170670 | Msa1209460 | 0.803093 | 4.108588e-49 | -8.615850e-47 |
| Msa1170670 | Msa1218450 | 0.815947 | 7.118204e-52 | -8.615850e-47 |
| Msa1170670 | Msa1220280 | 0.821023 | 5.032490e-53 | -8.615850e-47 |
| Msa1170670 | Msa1220380 | 0.813785 | 2.146563e-51 | -8.615850e-47 |
| Msa1170670 | Msa1265890 | 0.821805 | 3.320441e-53 | -8.615850e-47 |
| Msa1170670 | Msa1297230 | 0.824870 | 6.386704e-54 | -8.615850e-47 |
| Msa1170670 | Msa1298220 | 0.809384 | 1.943511e-50 | -8.615850e-47 |
| Msa1170670 | Msa1329980 | 0.805214 | 1.487169e-49 | -8.615850e-47 |
| Msa1170670 | Msa1330410 | 0.841021 | 6.117553e-58 | -8.615850e-47 |
| Msa1170670 | Msa1343430 | 0.801494 | 8.768972e-49 | -8.615850e-47 |
| Msa1170670 | Msa1358250 | 0.805517 | 1.284761e-49 | -8.615850e-47 |
| Msa1170670 | Msa1374120 | 0.817102 | 3.924862e-52 | -8.615850e-47 |
| Msa1170670 | Msa1382560 | 0.804754 | 1.855579e-49 | -8.615850e-47 |
| Msa1170670 | Msa1382620 | 0.832904 | 7.241318e-56 | -8.615850e-47 |
| Msa1170670 | Msa1390440 | 0.825031 | 5.848797e-54 | -8.615850e-47 |
| Msa1170670 | Msa1392780 | 0.809368 | 1.958952e-50 | -8.615850e-47 |
| Msa1170670 | Msa1393570 | 0.802116 | 6.535064e-49 | -8.615850e-47 |
| Msa1170670 | Msa1405930 | 0.995949 | 1.121342e-221 | -8.615850e-47 |
| Msa1170670 | Msa1425880 | 0.801338 | 9.440164e-49 | -8.615850e-47 |
| Msa1170670 | Msa1440310 | 0.832962 | 7.005121e-56 | -8.615850e-47 |
| Msa1170670 | Msa1464810 | 0.803809 | 2.920152e-49 | -8.615850e-47 |
| Msa0511270 | Msa1170670 | 0.804263 | 2.348845e-49 | -8.615850e-47 |
| Msa0511370 | Msa1170670 | 0.815779 | 7.763350e-52 | -8.615850e-47 |
| Msa0517070 | Msa1170670 | 0.922643 | 7.524548e-89 | -8.615850e-47 |
| Msa0523120 | Msa1170670 | 0.812821 | 3.495032e-51 | -8.615850e-47 |
| Msa0529890 | Msa1170670 | 0.801725 | 7.863054e-49 | -8.615850e-47 |
| Msa0532070 | Msa1170670 | 0.832996 | 6.872525e-56 | -8.615850e-47 |
| Msa0554920 | Msa1170670 | 0.805699 | 1.176498e-49 | -8.615850e-47 |
| Msa0569200 | Msa1170670 | 0.815811 | 7.633924e-52 | -8.615850e-47 |
| Msa0580370 | Msa1170670 | 0.803139 | 4.020389e-49 | -8.615850e-47 |
| Msa0588360 | Msa1170670 | 0.804296 | 2.312949e-49 | -8.615850e-47 |
| Msa0891710 | Msa1170670 | 0.809457 | 1.874727e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170670 | MtrunA17_Chr3g0128321 | 96.394 | 416 | 11 | 2 | 1 | 412 | 1 | 416 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170670 | AT5G24630.5 | 59.804 | 204 | 70 | 5 | 208 | 409 | 242 | 435 | 1.72e-65 | 216 |
| Msa1170670 | AT5G24630.12 | 63.934 | 183 | 55 | 4 | 228 | 409 | 225 | 397 | 3.81e-65 | 214 |
| Msa1170670 | AT5G24630.11 | 63.934 | 183 | 55 | 4 | 228 | 409 | 225 | 397 | 3.81e-65 | 214 |
| Msa1170670 | AT5G24630.8 | 63.934 | 183 | 55 | 4 | 228 | 409 | 225 | 397 | 3.81e-65 | 214 |
| Msa1170670 | AT5G24630.10 | 63.934 | 183 | 55 | 4 | 228 | 409 | 261 | 433 | 7.85e-65 | 214 |
| Msa1170670 | AT5G24630.2 | 63.934 | 183 | 55 | 4 | 228 | 409 | 249 | 421 | 9.29e-65 | 214 |
| Msa1170670 | AT5G24630.9 | 63.934 | 183 | 55 | 4 | 228 | 409 | 265 | 437 | 1.14e-64 | 214 |
| Msa1170670 | AT5G24630.4 | 63.934 | 183 | 55 | 4 | 228 | 409 | 267 | 439 | 1.20e-64 | 214 |
| Msa1170670 | AT5G24630.7 | 63.934 | 183 | 55 | 4 | 228 | 409 | 267 | 439 | 1.20e-64 | 214 |
| Msa1170670 | AT5G24630.3 | 63.934 | 183 | 55 | 4 | 228 | 409 | 267 | 439 | 1.20e-64 | 214 |
| Msa1170670 | AT5G24630.1 | 63.934 | 183 | 55 | 4 | 228 | 409 | 268 | 440 | 1.23e-64 | 214 |
| Msa1170670 | AT5G24630.6 | 63.934 | 183 | 55 | 4 | 228 | 409 | 271 | 443 | 1.29e-64 | 214 |
Find 111 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCACTACCCTTGTTCTTAT+TGG | 0.135839 | 7_4:+64081895 | None:intergenic |
| GCTTTCTTCTTTGCTGTCTT+TGG | 0.190175 | 7_4:+64079056 | None:intergenic |
| GAAGACTGCACACCAGTAAA+AGG | 0.264190 | 7_4:-64081211 | Msa1170670:CDS |
| CTTTCTTTGACTCATTTCTT+AGG | 0.266328 | 7_4:+64079011 | None:intergenic |
| TTATTATGTTCCTCATTATC+AGG | 0.269735 | 7_4:-64078796 | Msa1170670:three_prime_UTR |
| CATAGATCTGAGTGGTGATA+TGG | 0.271690 | 7_4:-64080435 | Msa1170670:CDS |
| GACAGTGTCACCGGCGAATT+AGG | 0.285567 | 7_4:+64082016 | None:intergenic |
| TTTCTTAGGCTTTGCCCTCT+TGG | 0.289065 | 7_4:+64079025 | None:intergenic |
| CGGAAAATCTCCATCCAAAA+AGG | 0.297047 | 7_4:-64081272 | Msa1170670:CDS |
| TTATTGGCCTTAAGATTCTT+AGG | 0.303993 | 7_4:+64081911 | None:intergenic |
| AGATTGGTTGCGTTCTTATC+AGG | 0.332376 | 7_4:-64082183 | Msa1170670:intron |
| TGATAATGAGGAACATAATA+AGG | 0.341133 | 7_4:+64078798 | None:intergenic |
| AAATTCTCCTGCTCGGGGTT+TGG | 0.345340 | 7_4:+64078856 | None:intergenic |
| TGTTTATGAAGCTGAAACTA+TGG | 0.348887 | 7_4:-64079498 | Msa1170670:CDS |
| GGCTTTGCCCTCTTGGAACT+TGG | 0.354261 | 7_4:+64079032 | None:intergenic |
| CATATCACCACTCAGATCTA+TGG | 0.355840 | 7_4:+64080436 | None:intergenic |
| GAAACTAAACCTCAACCTTC+TGG | 0.374230 | 7_4:-64081319 | Msa1170670:CDS |
| AGATTCCCCGTCCGGGGATC+AGG | 0.383118 | 7_4:-64080387 | Msa1170670:CDS |
| TTTATGCTCTGCTTCCTTGT+CGG | 0.385678 | 7_4:+64081594 | None:intergenic |
| GTGTACAGTTTCTTTCTTGT+GGG | 0.388627 | 7_4:+64081812 | None:intergenic |
| TTAAGATTCTTAGGTGACTT+AGG | 0.394502 | 7_4:+64081920 | None:intergenic |
| ATTCTTACATTAGGTACAAC+AGG | 0.403661 | 7_4:+64080987 | None:intergenic |
| CGATTTACCATCTCTGTCAT+TGG | 0.404669 | 7_4:+64078912 | None:intergenic |
| CACAATGAGTGTATCGAAAC+AGG | 0.406956 | 7_4:+64078773 | None:intergenic |
| GACATACAACGCAAAACGTC+CGG | 0.449657 | 7_4:+64079927 | None:intergenic |
| AAAACAAAGGTTAATGCAAA+GGG | 0.449941 | 7_4:-64081184 | Msa1170670:CDS |
| ATTATCTCAGATTCCCCGTC+CGG | 0.450226 | 7_4:-64080395 | Msa1170670:CDS |
| CCTCAACCTTCTGGTGAAGA+TGG | 0.453566 | 7_4:-64081310 | Msa1170670:CDS |
| CAGCTCCCACATTGAATGAA+TGG | 0.455114 | 7_4:+64081405 | None:intergenic |
| ACCTTTATGACGGAGGGAAA+AGG | 0.461841 | 7_4:+64082477 | None:intergenic |
| TGATAAGAACGCAACCAATC+TGG | 0.466147 | 7_4:+64082185 | None:intergenic |
| CGTGTACAGTTTCTTTCTTG+TGG | 0.470835 | 7_4:+64081811 | None:intergenic |
| AACTGAAGATCATATTGATC+AGG | 0.477695 | 7_4:-64081344 | Msa1170670:CDS |
| CTGGAGATAGTTCGCCAGAT+TGG | 0.481862 | 7_4:-64082199 | Msa1170670:CDS |
| TTATCTCAGATTCCCCGTCC+GGG | 0.484353 | 7_4:-64080394 | Msa1170670:CDS |
| TAAGTCACCTAAGAATCTTA+AGG | 0.484727 | 7_4:-64081918 | Msa1170670:CDS |
| CCATCTTCACCAGAAGGTTG+AGG | 0.485121 | 7_4:+64081310 | None:intergenic |
| GAAGCTGAAACTATGGTTGA+AGG | 0.487381 | 7_4:-64079491 | Msa1170670:intron |
| ATAGATCTGAGTGGTGATAT+GGG | 0.488389 | 7_4:-64080434 | Msa1170670:CDS |
| GTACTATGATGCAGGAAAGA+AGG | 0.488549 | 7_4:-64081647 | Msa1170670:intron |
| TTTGATTCTGACGAGGAAGA+TGG | 0.492638 | 7_4:-64079313 | Msa1170670:CDS |
| CAATGACAGAGATGGTAAAT+CGG | 0.497969 | 7_4:-64078911 | Msa1170670:three_prime_UTR |
| ATGTGAAAAGGGACATTGGA+TGG | 0.498992 | 7_4:-64079343 | Msa1170670:intron |
| CAGGCTCTTGTTGAGTGTCA+AGG | 0.504953 | 7_4:-64080464 | Msa1170670:CDS |
| ACATTTCCTGATCCCCGGAC+GGG | 0.507819 | 7_4:+64080381 | None:intergenic |
| CGAAATGGGACAGGTGGTGA+TGG | 0.508948 | 7_4:-64081047 | Msa1170670:intron |
| GTGATATGGGAGCTGTAGGG+AGG | 0.516201 | 7_4:-64080421 | Msa1170670:CDS |
| CTGACGAGGAAGATGGTAAG+AGG | 0.521899 | 7_4:-64079306 | Msa1170670:CDS |
| AGACACCTGGTAAATCCAAA+AGG | 0.527784 | 7_4:-64079237 | Msa1170670:CDS |
| ATCTTCCTCGTCAGAATCAA+AGG | 0.528675 | 7_4:+64079315 | None:intergenic |
| TTTCATGTGAAAAGGGACAT+TGG | 0.535477 | 7_4:-64079347 | Msa1170670:intron |
| GAAAACAAAGGTTAATGCAA+AGG | 0.535733 | 7_4:-64081185 | Msa1170670:CDS |
| AAGACTGCACACCAGTAAAA+GGG | 0.542093 | 7_4:-64081210 | Msa1170670:CDS |
| AAGGTTAATGCAAAGGGGAA+AGG | 0.542305 | 7_4:-64081178 | Msa1170670:intron |
| TACAGTTTCTTTCTTGTGGG+TGG | 0.543570 | 7_4:+64081815 | None:intergenic |
| TCTGGTGAAGATGGACTTCG+TGG | 0.547152 | 7_4:-64081301 | Msa1170670:CDS |
| CTAATTACCTTTATGACGGA+GGG | 0.548331 | 7_4:+64082471 | None:intergenic |
| TCGAAACAGGCCTGATAATG+AGG | 0.550571 | 7_4:+64078786 | None:intergenic |
| GATGGACTTCGTGGCAATGA+CGG | 0.550838 | 7_4:-64081292 | Msa1170670:CDS |
| ACAACGCAAAACGTCCGGCT+AGG | 0.551306 | 7_4:+64079932 | None:intergenic |
| AGTGGTGATATGGGAGCTGT+AGG | 0.551651 | 7_4:-64080425 | Msa1170670:CDS |
| ATTCTTACCAAACCCCGAGC+AGG | 0.555541 | 7_4:-64078863 | Msa1170670:three_prime_UTR |
| CATTTCCTGATCCCCGGACG+GGG | 0.562368 | 7_4:+64080382 | None:intergenic |
| AGATCTAATTACCTTTATGA+CGG | 0.566384 | 7_4:+64082467 | None:intergenic |
| GGTAAATGAAGATGAGAAAG+CGG | 0.573759 | 7_4:+64082238 | None:intergenic |
| CACATTTCCTGATCCCCGGA+CGG | 0.578180 | 7_4:+64080380 | None:intergenic |
| GAATCAGATGACAGTGTCAC+CGG | 0.579458 | 7_4:+64082007 | None:intergenic |
| AGAAAGCTCCAAGTTCCAAG+AGG | 0.587132 | 7_4:-64079040 | Msa1170670:CDS |
| CTGTATGAAGTCGTTCATGA+TGG | 0.587502 | 7_4:+64079538 | None:intergenic |
| TAAGCACATTTCCTGATCCC+CGG | 0.588249 | 7_4:+64080376 | None:intergenic |
| CACGCTGAGGAACAGACACC+TGG | 0.588572 | 7_4:-64079250 | Msa1170670:CDS |
| CAGGGTGCTGAAAAGAAAAG+AGG | 0.588839 | 7_4:-64079104 | Msa1170670:CDS |
| CTTTGGGCAGACAGAGGCAA+AGG | 0.589063 | 7_4:-64079761 | Msa1170670:intron |
| TCTAATTACCTTTATGACGG+AGG | 0.590426 | 7_4:+64082470 | None:intergenic |
| GCTATGATCACGACATGACT+CGG | 0.590906 | 7_4:+64081372 | None:intergenic |
| TCTTAAGGCCAATAAGAACA+AGG | 0.596455 | 7_4:-64081903 | Msa1170670:CDS |
| GGTGCCCACTCCTAATTCGC+CGG | 0.598921 | 7_4:-64082026 | Msa1170670:CDS |
| ACTTTCTCAGAAAGCATCAA+AGG | 0.599098 | 7_4:+64080802 | None:intergenic |
| GCGACTATCATGTAAATACT+CGG | 0.599318 | 7_4:+64081985 | None:intergenic |
| TATCTCAGATTCCCCGTCCG+GGG | 0.600901 | 7_4:-64080393 | Msa1170670:CDS |
| ACCTGGTAAATCCAAAAGGA+AGG | 0.601971 | 7_4:-64079233 | Msa1170670:CDS |
| AAGCATCAAAGGCAATATTG+AGG | 0.602144 | 7_4:+64080813 | None:intergenic |
| GTGGTGATATGGGAGCTGTA+GGG | 0.605513 | 7_4:-64080424 | Msa1170670:CDS |
| GAAATGTGCTTAGATTTGAA+AGG | 0.606376 | 7_4:-64080365 | Msa1170670:intron |
| GAAAGCTCCAAGTTCCAAGA+GGG | 0.606806 | 7_4:-64079039 | Msa1170670:CDS |
| TCAGCTTCATAAACATCAGA+CGG | 0.609363 | 7_4:+64079506 | None:intergenic |
| CGAAGTCCATCTTCACCAGA+AGG | 0.616356 | 7_4:+64081304 | None:intergenic |
| AAAGAAACTGTACACGCGGA+AGG | 0.621325 | 7_4:-64081804 | Msa1170670:CDS |
| AGGAATCCATTCATTCAATG+TGG | 0.621403 | 7_4:-64081411 | Msa1170670:CDS |
| AAACATCTATAGTTCCTAGC+CGG | 0.625002 | 7_4:-64079946 | Msa1170670:CDS |
| TGATATGGGAGCTGTAGGGA+GGG | 0.625544 | 7_4:-64080420 | Msa1170670:CDS |
| GGAATCCATTCATTCAATGT+GGG | 0.629446 | 7_4:-64081410 | Msa1170670:CDS |
| CAATTTACCAATGACAGAGA+TGG | 0.633181 | 7_4:-64078919 | Msa1170670:three_prime_UTR |
| TTTATGACGGAGGGAAAAGG+CGG | 0.633259 | 7_4:+64082480 | None:intergenic |
| GGTTAGCTTTGGGCAGACAG+AGG | 0.635444 | 7_4:-64079767 | Msa1170670:CDS |
| CAAGAAAGAAACTGTACACG+CGG | 0.635708 | 7_4:-64081808 | Msa1170670:CDS |
| CTATGATGCAGGAAAGAAGG+AGG | 0.639245 | 7_4:-64081644 | Msa1170670:intron |
| CATCAAAGGCAATATTGAGG+AGG | 0.641549 | 7_4:+64080816 | None:intergenic |
| TGTCACCGGCGAATTAGGAG+TGG | 0.641843 | 7_4:+64082021 | None:intergenic |
| GTCACCGGCGAATTAGGAGT+GGG | 0.658496 | 7_4:+64082022 | None:intergenic |
| CTTAAGGCCAATAAGAACAA+GGG | 0.659601 | 7_4:-64081902 | Msa1170670:CDS |
| TGAGAAAGTTCATCGCACAA+AGG | 0.671129 | 7_4:-64080788 | Msa1170670:intron |
| TTATGACGGAGGGAAAAGGC+GGG | 0.671583 | 7_4:+64082481 | None:intergenic |
| AAGGAAGGCGGACAAAACAT+CGG | 0.672092 | 7_4:-64079218 | Msa1170670:intron |
| AGTAAAAGGGAAGAAAACAA+AGG | 0.673109 | 7_4:-64081197 | Msa1170670:CDS |
| TGATCAAAACGAGCACGCTG+AGG | 0.690459 | 7_4:-64079263 | Msa1170670:CDS |
| GCTTCATAAACATCAGACGG+TGG | 0.691289 | 7_4:+64079509 | None:intergenic |
| TGGTAAATCCAAAAGGAAGG+CGG | 0.692323 | 7_4:-64079230 | Msa1170670:CDS |
| GCTCGATTCAGACACCGACA+AGG | 0.693845 | 7_4:-64081608 | Msa1170670:CDS |
| AAACAAAGGTTAATGCAAAG+GGG | 0.698410 | 7_4:-64081183 | Msa1170670:CDS |
| GGTGACTCCATAGATCTGAG+TGG | 0.759776 | 7_4:-64080443 | Msa1170670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAACTTTTAAGAAAAAA+AGG | - | chr7_4:64080085-64080104 | Msa1170670:intron | 10.0% |
| !! | ATAAGTAAATTAAATAAATG+AGG | + | chr7_4:64081585-64081604 | None:intergenic | 10.0% |
| !!! | CTTGATATTTGATTTTAATT+TGG | - | chr7_4:64079458-64079477 | Msa1170670:intron | 15.0% |
| !!! | ATATTATTTTACCGAAAAAA+AGG | - | chr7_4:64081814-64081833 | Msa1170670:CDS | 15.0% |
| !!! | TCATATTTTTTCCTTTTTTT+CGG | + | chr7_4:64081828-64081847 | None:intergenic | 15.0% |
| !!! | TTATCTTTCAGATTTTAGTT+CGG | - | chr7_4:64078830-64078849 | Msa1170670:three_prime_UTR | 20.0% |
| !!! | GCTTATAATTTTGTTTTGAA+TGG | - | chr7_4:64080619-64080638 | Msa1170670:intron | 20.0% |
| !!! | TTTTTCATGAAAAAAGGAAA+TGG | + | chr7_4:64080705-64080724 | None:intergenic | 20.0% |
| !!! | ATTTCCTTTTTTCATGAAAA+AGG | - | chr7_4:64080704-64080723 | Msa1170670:intron | 20.0% |
| !!! | ATCTTACCTGTTTTAAAAAA+AGG | - | chr7_4:64081060-64081079 | Msa1170670:intron | 20.0% |
| !!! | TCTTACCTGTTTTAAAAAAA+GGG | - | chr7_4:64081061-64081080 | Msa1170670:intron | 20.0% |
| !! | ACATTAGAACAAATATAACT+TGG | + | chr7_4:64081157-64081176 | None:intergenic | 20.0% |
| !! | AAGAAAATTACGACTTATAA+TGG | + | chr7_4:64081182-64081201 | None:intergenic | 20.0% |
| !! | AAATAAAGATTTGAACAATC+AGG | + | chr7_4:64081238-64081257 | None:intergenic | 20.0% |
| !!! | CAAATCTTTATTTTCTTTTC+AGG | - | chr7_4:64081245-64081264 | Msa1170670:CDS | 20.0% |
| !! | AAAGCAATATTTAAAAGGTA+TGG | + | chr7_4:64081408-64081427 | None:intergenic | 20.0% |
| !! | GTATGAAAGCAATATTTAAA+AGG | + | chr7_4:64081413-64081432 | None:intergenic | 20.0% |
| !! | AGTTACAGGTTAAATATTAA+TGG | + | chr7_4:64081651-64081670 | None:intergenic | 20.0% |
| !!! | TCTATTATTTTCATGTGAAA+AGG | - | chr7_4:64081870-64081889 | Msa1170670:CDS | 20.0% |
| !!! | CTATTATTTTCATGTGAAAA+GGG | - | chr7_4:64081871-64081890 | Msa1170670:CDS | 20.0% |
| ! | AGATCTAATTACCTTTATGA+CGG | + | chr7_4:64078761-64078780 | None:intergenic | 25.0% |
| ! | ATAATCACAATACAAATAGC+AGG | + | chr7_4:64079770-64079789 | None:intergenic | 25.0% |
| !!! | TATACCAAATGTTTTTGCAT+AGG | - | chr7_4:64079794-64079813 | Msa1170670:intron | 25.0% |
| !! | CAATATGATCTTCAGTTTTT+GGG | + | chr7_4:64079878-64079897 | None:intergenic | 25.0% |
| !! | TCAATATGATCTTCAGTTTT+TGG | + | chr7_4:64079879-64079898 | None:intergenic | 25.0% |
| ! | AAAACAAAGGTTAATGCAAA+GGG | - | chr7_4:64080041-64080060 | Msa1170670:intron | 25.0% |
| ! | AGAAACATGTATAAATGGTA+AGG | + | chr7_4:64080158-64080177 | None:intergenic | 25.0% |
| ! | TTTCGAGAAACATGTATAAA+TGG | + | chr7_4:64080163-64080182 | None:intergenic | 25.0% |
| ! | TTTATACATGTTTCTCGAAA+TGG | - | chr7_4:64080163-64080182 | Msa1170670:intron | 25.0% |
| ! | TTATACATGTTTCTCGAAAT+GGG | - | chr7_4:64080164-64080183 | Msa1170670:intron | 25.0% |
| ! | AACAATGTCATTCTTACATT+AGG | + | chr7_4:64080250-64080269 | None:intergenic | 25.0% |
| !! | CCATGCTGTAAAATATTTTT+AGG | + | chr7_4:64080283-64080302 | None:intergenic | 25.0% |
| !! | CCTAAAAATATTTTACAGCA+TGG | - | chr7_4:64080280-64080299 | Msa1170670:intron | 25.0% |
| !!! | TGTTTGGTTTTATAGTTGTA+TGG | - | chr7_4:64080501-64080520 | Msa1170670:intron | 25.0% |
| !!! | GTTTGGTTTTATAGTTGTAT+GGG | - | chr7_4:64080502-64080521 | Msa1170670:intron | 25.0% |
| ! | TCGAAAACATATAAATTTCG+TGG | - | chr7_4:64080577-64080596 | Msa1170670:intron | 25.0% |
| !!! | GTTTCCTTTTTCATGAAAAA+AGG | + | chr7_4:64080711-64080730 | None:intergenic | 25.0% |
| ! | AAAATAGCTAAGCTGTATTA+TGG | + | chr7_4:64080989-64081008 | None:intergenic | 25.0% |
| !!! | AGATTCCCTTTTTTTAAAAC+AGG | + | chr7_4:64081069-64081088 | None:intergenic | 25.0% |
| ! | GAAATCAAAATGTCAAAAAG+AGG | + | chr7_4:64081130-64081149 | None:intergenic | 25.0% |
| !! | TTTCTTCTTCTTTTTCTTTC+AGG | - | chr7_4:64081437-64081456 | Msa1170670:intron | 25.0% |
| ! | AAGTAAAATCTAGACAACAA+CGG | + | chr7_4:64081491-64081510 | None:intergenic | 25.0% |
| ! | TCTATCTGAAAATAAGTTAC+AGG | + | chr7_4:64081665-64081684 | None:intergenic | 25.0% |
| !!! | TGTAACTTATTTTCAGATAG+AGG | - | chr7_4:64081664-64081683 | Msa1170670:intron | 25.0% |
| ! | TAAAATCCTCAGTTAATTGT+TGG | + | chr7_4:64081773-64081792 | None:intergenic | 25.0% |
| !! | ATAATATTTAAAGCAGCACT+AGG | + | chr7_4:64081801-64081820 | None:intergenic | 25.0% |
| ! | AAGAAAAGAGGTAAAAATAC+TGG | - | chr7_4:64082133-64082152 | Msa1170670:intron | 25.0% |
| !!! | TATTTTTAAATTCTCCTGCT+CGG | + | chr7_4:64082379-64082398 | None:intergenic | 25.0% |
| !! | TGATAATGAGGAACATAATA+AGG | + | chr7_4:64082430-64082449 | None:intergenic | 25.0% |
| ! | TTATTATGTTCCTCATTATC+AGG | - | chr7_4:64082429-64082448 | Msa1170670:intron | 25.0% |
| GAACGAAAAACAAGTGTATA+AGG | + | chr7_4:64078952-64078971 | None:intergenic | 30.0% | |
| TTGTGCAATACTAACATCAT+TGG | - | chr7_4:64079152-64079171 | Msa1170670:intron | 30.0% | |
| !! | TTACACATTTTTGTGCTACT+AGG | - | chr7_4:64079178-64079197 | Msa1170670:intron | 30.0% |
| TTAAGATTCTTAGGTGACTT+AGG | + | chr7_4:64079308-64079327 | None:intergenic | 30.0% | |
| TAAGTCACCTAAGAATCTTA+AGG | - | chr7_4:64079307-64079326 | Msa1170670:CDS | 30.0% | |
| !! | TTATTGGCCTTAAGATTCTT+AGG | + | chr7_4:64079317-64079336 | None:intergenic | 30.0% |
| GTAAAAATAACACTCTCGAA+TGG | + | chr7_4:64079544-64079563 | None:intergenic | 30.0% | |
| CTAACATTTAAAGATGCGAT+GGG | + | chr7_4:64079663-64079682 | None:intergenic | 30.0% | |
| ATTGTGTCAAAAATATGGGT+TGG | - | chr7_4:64079738-64079757 | Msa1170670:intron | 30.0% | |
| !!! | TCAAAAATATGGGTTGGTTT+TGG | - | chr7_4:64079744-64079763 | Msa1170670:intron | 30.0% |
| GATTCCTATGCAAAAACATT+TGG | + | chr7_4:64079801-64079820 | None:intergenic | 30.0% | |
| AACTGAAGATCATATTGATC+AGG | - | chr7_4:64079881-64079900 | Msa1170670:intron | 30.0% | |
| !! | TTTGTTTTCTTCCCTTTTAC+TGG | + | chr7_4:64080029-64080048 | None:intergenic | 30.0% |
| AGTAAAAGGGAAGAAAACAA+AGG | - | chr7_4:64080028-64080047 | Msa1170670:intron | 30.0% | |
| GAAAACAAAGGTTAATGCAA+AGG | - | chr7_4:64080040-64080059 | Msa1170670:intron | 30.0% | |
| AAACAAAGGTTAATGCAAAG+GGG | - | chr7_4:64080042-64080061 | Msa1170670:intron | 30.0% | |
| CATGCATATGGATATGAAAT+AGG | - | chr7_4:64080127-64080146 | Msa1170670:intron | 30.0% | |
| ATTCTTACATTAGGTACAAC+AGG | + | chr7_4:64080241-64080260 | None:intergenic | 30.0% | |
| TTGTTCATGTATCAAAGTGA+CGG | + | chr7_4:64080306-64080325 | None:intergenic | 30.0% | |
| AAAACCAAACATGTAGCAAA+GGG | + | chr7_4:64080492-64080511 | None:intergenic | 30.0% | |
| TAAAACCAAACATGTAGCAA+AGG | + | chr7_4:64080493-64080512 | None:intergenic | 30.0% | |
| CATGTTTAAATACTACCACA+GGG | - | chr7_4:64080526-64080545 | Msa1170670:intron | 30.0% | |
| GAAATGTGCTTAGATTTGAA+AGG | - | chr7_4:64080860-64080879 | Msa1170670:intron | 30.0% | |
| !! | ACACTACTTTTGTCTAATAG+TGG | - | chr7_4:64081205-64081224 | Msa1170670:CDS | 30.0% |
| AAAGATTTGAACAATCAGGT+AGG | + | chr7_4:64081234-64081253 | None:intergenic | 30.0% | |
| GTAATCTGCATTTATCATCA+CGG | - | chr7_4:64081330-64081349 | Msa1170670:CDS | 30.0% | |
| AAGGTATGGTATCTTAATCA+TGG | + | chr7_4:64081394-64081413 | None:intergenic | 30.0% | |
| !!! | TTTTTCTTTCAGGTTAGCTT+TGG | - | chr7_4:64081447-64081466 | Msa1170670:intron | 30.0% |
| !!! | TTTTCTTTCAGGTTAGCTTT+GGG | - | chr7_4:64081448-64081467 | Msa1170670:intron | 30.0% |
| TAAATATGTCCGAATACATC+TGG | - | chr7_4:64081530-64081549 | Msa1170670:intron | 30.0% | |
| AGTAGTAATCCAGATGTATT+CGG | + | chr7_4:64081542-64081561 | None:intergenic | 30.0% | |
| ! | ATTTTACAAAATCCTGGTCA+AGG | + | chr7_4:64081622-64081641 | None:intergenic | 30.0% |
| ! | GACCAGGATTTTGTAAAATA+CGG | - | chr7_4:64081623-64081642 | Msa1170670:CDS | 30.0% |
| TGTTTATGAAGCTGAAACTA+TGG | - | chr7_4:64081727-64081746 | Msa1170670:intron | 30.0% | |
| AATCTAAACCAAAAGCAACT+AGG | + | chr7_4:64082040-64082059 | None:intergenic | 30.0% | |
| ! | GTATTGATGATTGAAATTGC+TGG | - | chr7_4:64082065-64082084 | Msa1170670:intron | 30.0% |
| TTGCTGAAAATTTCGAAACA+GGG | - | chr7_4:64082103-64082122 | Msa1170670:intron | 30.0% | |
| AAAAGAGGTAAAAATACTGG+AGG | - | chr7_4:64082136-64082155 | Msa1170670:intron | 30.0% | |
| CTTTCTTTGACTCATTTCTT+AGG | + | chr7_4:64082217-64082236 | None:intergenic | 30.0% | |
| ! | ATTTTTAAATTCTCCTGCTC+GGG | + | chr7_4:64082378-64082397 | None:intergenic | 30.0% |
| ! | CTAATTACCTTTATGACGGA+GGG | + | chr7_4:64078757-64078776 | None:intergenic | 35.0% |
| TCTAATTACCTTTATGACGG+AGG | + | chr7_4:64078758-64078777 | None:intergenic | 35.0% | |
| CAAATGATCGAACAGGTAAT+GGG | + | chr7_4:64078912-64078931 | None:intergenic | 35.0% | |
| CGAAAAACAAGTGTATAAGG+AGG | + | chr7_4:64078949-64078968 | None:intergenic | 35.0% | |
| GGTAAATGAAGATGAGAAAG+CGG | + | chr7_4:64078990-64079009 | None:intergenic | 35.0% | |
| ACCTAAAAAATGAGCAGTTC+TGG | - | chr7_4:64079007-64079026 | Msa1170670:exon | 35.0% | |
| !!! | TCCAGAACTGCTCATTTTTT+AGG | + | chr7_4:64079011-64079030 | None:intergenic | 35.0% |
| ACATTGTACATCAGTTCCTA+AGG | - | chr7_4:64079124-64079143 | Msa1170670:intron | 35.0% | |
| CATTGTACATCAGTTCCTAA+GGG | - | chr7_4:64079125-64079144 | Msa1170670:intron | 35.0% | |
| TGCAATACTAACATCATTGG+TGG | - | chr7_4:64079155-64079174 | Msa1170670:intron | 35.0% | |
| GCGACTATCATGTAAATACT+CGG | + | chr7_4:64079243-64079262 | None:intergenic | 35.0% | |
| TCTTAAGGCCAATAAGAACA+AGG | - | chr7_4:64079322-64079341 | Msa1170670:CDS | 35.0% | |
| CTTAAGGCCAATAAGAACAA+GGG | - | chr7_4:64079323-64079342 | Msa1170670:CDS | 35.0% | |
| GTGTACAGTTTCTTTCTTGT+GGG | + | chr7_4:64079416-64079435 | None:intergenic | 35.0% | |
| !! | GTCATTTTGTACTATGATGC+AGG | - | chr7_4:64079570-64079589 | Msa1170670:intron | 35.0% |
| CCTAACATTTAAAGATGCGA+TGG | + | chr7_4:64079664-64079683 | None:intergenic | 35.0% | |
| CCATCGCATCTTTAAATGTT+AGG | - | chr7_4:64079661-64079680 | Msa1170670:intron | 35.0% | |
| TCGCATCTTTAAATGTTAGG+TGG | - | chr7_4:64079664-64079683 | Msa1170670:intron | 35.0% | |
| TTAGGTGGCATTTGTAGATT+TGG | - | chr7_4:64079679-64079698 | Msa1170670:intron | 35.0% | |
| TAGGTGGCATTTGTAGATTT+GGG | - | chr7_4:64079680-64079699 | Msa1170670:intron | 35.0% | |
| TTGACACAATGCGCATAATA+AGG | + | chr7_4:64079728-64079747 | None:intergenic | 35.0% | |
| TGCGCATTGTGTCAAAAATA+TGG | - | chr7_4:64079733-64079752 | Msa1170670:intron | 35.0% | |
| GCGCATTGTGTCAAAAATAT+GGG | - | chr7_4:64079734-64079753 | Msa1170670:intron | 35.0% | |
| AGGAATCCATTCATTCAATG+TGG | - | chr7_4:64079814-64079833 | Msa1170670:intron | 35.0% | |
| GGAATCCATTCATTCAATGT+GGG | - | chr7_4:64079815-64079834 | Msa1170670:intron | 35.0% | |
| CATATCCATATGCATGAAGA+TGG | + | chr7_4:64080123-64080142 | None:intergenic | 35.0% | |
| ! | AAAGCACAATTTAGAATGCC+AGG | + | chr7_4:64080367-64080386 | None:intergenic | 35.0% |
| CTTTGCTTTCTATTTGTTCC+AGG | - | chr7_4:64080383-64080402 | Msa1170670:CDS | 35.0% | |
| AAGCATCAAAGGCAATATTG+AGG | + | chr7_4:64080415-64080434 | None:intergenic | 35.0% | |
| !! | ACTTTCTCAGAAAGCATCAA+AGG | + | chr7_4:64080426-64080445 | None:intergenic | 35.0% |
| CCTGTGGTAGTATTTAAACA+TGG | + | chr7_4:64080528-64080547 | None:intergenic | 35.0% | |
| CCATGTTTAAATACTACCAC+AGG | - | chr7_4:64080525-64080544 | Msa1170670:intron | 35.0% | |
| !! | GTTTTGAATGGAACGACAAA+TGG | - | chr7_4:64080631-64080650 | Msa1170670:intron | 35.0% |
| ATAGATCTGAGTGGTGATAT+GGG | - | chr7_4:64080791-64080810 | Msa1170670:CDS | 35.0% | |
| GAGGTAATCGCTAAAAATCA+AGG | + | chr7_4:64081111-64081130 | None:intergenic | 35.0% | |
| AAACATCTATAGTTCCTAGC+CGG | - | chr7_4:64081279-64081298 | Msa1170670:CDS | 35.0% | |
| ! | TTTTGCGTTGTATGTCATCT+TGG | - | chr7_4:64081305-64081324 | Msa1170670:CDS | 35.0% |
| AGGCCAAATAGAAACTTTCA+AGG | + | chr7_4:64081356-64081375 | None:intergenic | 35.0% | |
| ! | CACCGTATTTTACAAAATCC+TGG | + | chr7_4:64081628-64081647 | None:intergenic | 35.0% |
| TCAGCTTCATAAACATCAGA+CGG | + | chr7_4:64081722-64081741 | None:intergenic | 35.0% | |
| AATCCTCAGTTAATTGTTGG+TGG | + | chr7_4:64081770-64081789 | None:intergenic | 35.0% | |
| TTTCATGTGAAAAGGGACAT+TGG | - | chr7_4:64081878-64081897 | Msa1170670:CDS | 35.0% | |
| ! | TTTTTCCTTTGATTCTGACG+AGG | - | chr7_4:64081905-64081924 | Msa1170670:CDS | 35.0% |
| !! | GTAAGTTTCCTAGTTGCTTT+TGG | - | chr7_4:64082029-64082048 | Msa1170670:intron | 35.0% |
| GTTGCTGAAAATTTCGAAAC+AGG | - | chr7_4:64082102-64082121 | Msa1170670:intron | 35.0% | |
| CAATTTACCAATGACAGAGA+TGG | - | chr7_4:64082306-64082325 | Msa1170670:intron | 35.0% | |
| CAATGACAGAGATGGTAAAT+CGG | - | chr7_4:64082314-64082333 | Msa1170670:intron | 35.0% | |
| ! | TTTTTAAATTCTCCTGCTCG+GGG | + | chr7_4:64082377-64082396 | None:intergenic | 35.0% |
| GCAAATGATCGAACAGGTAA+TGG | + | chr7_4:64078913-64078932 | None:intergenic | 40.0% | |
| AGTGAAGCAAATGATCGAAC+AGG | + | chr7_4:64078919-64078938 | None:intergenic | 40.0% | |
| TGATAAGAACGCAACCAATC+TGG | + | chr7_4:64079043-64079062 | None:intergenic | 40.0% | |
| ! | AGATTGGTTGCGTTCTTATC+AGG | - | chr7_4:64079042-64079061 | Msa1170670:CDS | 40.0% |
| GTATTGCACAACTAACCCTT+AGG | + | chr7_4:64079143-64079162 | None:intergenic | 40.0% | |
| ! | TAGTCGCAGTTTTTCTGATG+AGG | - | chr7_4:64079256-64079275 | Msa1170670:CDS | 40.0% |
| !! | CGTCTTTTTCGTTGAAGACT+TGG | + | chr7_4:64079354-64079373 | None:intergenic | 40.0% |
| GTCTTCAACGAAAAAGACGT+TGG | - | chr7_4:64079355-64079374 | Msa1170670:intron | 40.0% | |
| TCAACGAAAAAGACGTTGGA+AGG | - | chr7_4:64079359-64079378 | Msa1170670:intron | 40.0% | |
| TACAGTTTCTTTCTTGTGGG+TGG | + | chr7_4:64079413-64079432 | None:intergenic | 40.0% | |
| CGTGTACAGTTTCTTTCTTG+TGG | + | chr7_4:64079417-64079436 | None:intergenic | 40.0% | |
| CAAGAAAGAAACTGTACACG+CGG | - | chr7_4:64079417-64079436 | Msa1170670:intron | 40.0% | |
| TACACGCGGAAGGATAAAAA+TGG | - | chr7_4:64079431-64079450 | Msa1170670:intron | 40.0% | |
| GTACTATGATGCAGGAAAGA+AGG | - | chr7_4:64079578-64079597 | Msa1170670:intron | 40.0% | |
| TTTATGCTCTGCTTCCTTGT+CGG | + | chr7_4:64079634-64079653 | None:intergenic | 40.0% | |
| AGGTGGCATTTGTAGATTTG+GGG | - | chr7_4:64079681-64079700 | Msa1170670:intron | 40.0% | |
| GAAACTAAACCTCAACCTTC+TGG | - | chr7_4:64079906-64079925 | Msa1170670:intron | 40.0% | |
| CGGAAAATCTCCATCCAAAA+AGG | - | chr7_4:64079953-64079972 | Msa1170670:CDS | 40.0% | |
| !!! | GCTTTTGAAGCCTTTTTGGA+TGG | + | chr7_4:64079966-64079985 | None:intergenic | 40.0% |
| !!! | CTTCGCTTTTGAAGCCTTTT+TGG | + | chr7_4:64079970-64079989 | None:intergenic | 40.0% |
| CAAAAAGGCTTCAAAAGCGA+AGG | - | chr7_4:64079968-64079987 | Msa1170670:intron | 40.0% | |
| AAGACTGCACACCAGTAAAA+GGG | - | chr7_4:64080015-64080034 | Msa1170670:intron | 40.0% | |
| AAGGTTAATGCAAAGGGGAA+AGG | - | chr7_4:64080047-64080066 | Msa1170670:intron | 40.0% | |
| TTGCTCCATCTTCATGCATA+TGG | - | chr7_4:64080115-64080134 | Msa1170670:intron | 40.0% | |
| CATCAAAGGCAATATTGAGG+AGG | + | chr7_4:64080412-64080431 | None:intergenic | 40.0% | |
| TGAGAAAGTTCATCGCACAA+AGG | - | chr7_4:64080437-64080456 | Msa1170670:CDS | 40.0% | |
| GATTCCCTTTGCTACATGTT+TGG | - | chr7_4:64080485-64080504 | Msa1170670:intron | 40.0% | |
| AGTGAAATGCGTTACTCATC+TGG | + | chr7_4:64080556-64080575 | None:intergenic | 40.0% | |
| TGGAAGAAAAGTTGCTAGTC+TGG | - | chr7_4:64080597-64080616 | Msa1170670:intron | 40.0% | |
| !!! | ACAGAGCAGCTTTTTAGGAT+TGG | + | chr7_4:64080737-64080756 | None:intergenic | 40.0% |
| ! | GCAAAACAGAGCAGCTTTTT+AGG | + | chr7_4:64080742-64080761 | None:intergenic | 40.0% |
| ! | AAAAAGCTGCTCTGTTTTGC+AGG | - | chr7_4:64080742-64080761 | Msa1170670:intron | 40.0% |
| CATATCACCACTCAGATCTA+TGG | + | chr7_4:64080792-64080811 | None:intergenic | 40.0% | |
| CATAGATCTGAGTGGTGATA+TGG | - | chr7_4:64080790-64080809 | Msa1170670:CDS | 40.0% | |
| GTATACGCAGTGTTATCATC+AGG | + | chr7_4:64080958-64080977 | None:intergenic | 40.0% | |
| CGGCCTTGAAAGTTTCTATT+TGG | - | chr7_4:64081350-64081369 | Msa1170670:CDS | 40.0% | |
| CATGGAAGTAACTAGCTACA+AGG | + | chr7_4:64081376-64081395 | None:intergenic | 40.0% | |
| CTGTATGAAGTCGTTCATGA+TGG | + | chr7_4:64081690-64081709 | None:intergenic | 40.0% | |
| GAAGCTGAAACTATGGTTGA+AGG | - | chr7_4:64081734-64081753 | Msa1170670:intron | 40.0% | |
| CATCCACCAACAATTAACTG+AGG | - | chr7_4:64081764-64081783 | Msa1170670:intron | 40.0% | |
| ATGTGAAAAGGGACATTGGA+TGG | - | chr7_4:64081882-64081901 | Msa1170670:CDS | 40.0% | |
| ATCTTCCTCGTCAGAATCAA+AGG | + | chr7_4:64081913-64081932 | None:intergenic | 40.0% | |
| TTTGATTCTGACGAGGAAGA+TGG | - | chr7_4:64081912-64081931 | Msa1170670:CDS | 40.0% | |
| AGACACCTGGTAAATCCAAA+AGG | - | chr7_4:64081988-64082007 | Msa1170670:CDS | 40.0% | |
| ACCTGGTAAATCCAAAAGGA+AGG | - | chr7_4:64081992-64082011 | Msa1170670:CDS | 40.0% | |
| TGGTAAATCCAAAAGGAAGG+CGG | - | chr7_4:64081995-64082014 | Msa1170670:CDS | 40.0% | |
| ! | GCTTTCTTCTTTGCTGTCTT+TGG | + | chr7_4:64082172-64082191 | None:intergenic | 40.0% |
| CGATTTACCATCTCTGTCAT+TGG | + | chr7_4:64082316-64082335 | None:intergenic | 40.0% | |
| CACAATGAGTGTATCGAAAC+AGG | + | chr7_4:64082455-64082474 | None:intergenic | 40.0% | |
| ! | TTTATGACGGAGGGAAAAGG+CGG | + | chr7_4:64078748-64078767 | None:intergenic | 45.0% |
| ! | ACCTTTATGACGGAGGGAAA+AGG | + | chr7_4:64078751-64078770 | None:intergenic | 45.0% |
| GAATCAGATGACAGTGTCAC+CGG | + | chr7_4:64079221-64079240 | None:intergenic | 45.0% | |
| GGCACTACCCTTGTTCTTAT+TGG | + | chr7_4:64079333-64079352 | None:intergenic | 45.0% | |
| AAAGAAACTGTACACGCGGA+AGG | - | chr7_4:64079421-64079440 | Msa1170670:intron | 45.0% | |
| CTATGATGCAGGAAAGAAGG+AGG | - | chr7_4:64079581-64079600 | Msa1170670:intron | 45.0% | |
| CAGCTCCCACATTGAATGAA+TGG | + | chr7_4:64079823-64079842 | None:intergenic | 45.0% | |
| GCTATGATCACGACATGACT+CGG | + | chr7_4:64079856-64079875 | None:intergenic | 45.0% | |
| GAAGACTGCACACCAGTAAA+AGG | - | chr7_4:64080014-64080033 | Msa1170670:intron | 45.0% | |
| ! | CAAAGGGGAAAGGTACGAAA+TGG | - | chr7_4:64080057-64080076 | Msa1170670:intron | 45.0% |
| CATGTTTCTCGAAATGGGAC+AGG | - | chr7_4:64080169-64080188 | Msa1170670:intron | 45.0% | |
| ! | TTTAGAATGCCAGGCTGGAT+AGG | + | chr7_4:64080358-64080377 | None:intergenic | 45.0% |
| ! | CACAATTTAGAATGCCAGGC+TGG | + | chr7_4:64080363-64080382 | None:intergenic | 45.0% |
| GCAATATTGAGGAGGAAACC+TGG | + | chr7_4:64080404-64080423 | None:intergenic | 45.0% | |
| AAGTTCATCGCACAAAGGTC+AGG | - | chr7_4:64080442-64080461 | Msa1170670:CDS | 45.0% | |
| ATTATCTCAGATTCCCCGTC+CGG | - | chr7_4:64080830-64080849 | Msa1170670:intron | 45.0% | |
| TAAGCACATTTCCTGATCCC+CGG | + | chr7_4:64080852-64080871 | None:intergenic | 45.0% | |
| GACATACAACGCAAAACGTC+CGG | + | chr7_4:64081301-64081320 | None:intergenic | 45.0% | |
| GCTTCATAAACATCAGACGG+TGG | + | chr7_4:64081719-64081738 | None:intergenic | 45.0% | |
| !! | CTCGTTTTGATCAGTTGGGT+GGG | + | chr7_4:64081955-64081974 | None:intergenic | 45.0% |
| !! | CGTGCTCGTTTTGATCAGTT+GGG | + | chr7_4:64081959-64081978 | None:intergenic | 45.0% |
| ! | GCCTTCCTTTTGGATTTACC+AGG | + | chr7_4:64081996-64082015 | None:intergenic | 45.0% |
| ! | TGTTTTGTCCGCCTTCCTTT+TGG | + | chr7_4:64082006-64082025 | None:intergenic | 45.0% |
| AAGGAAGGCGGACAAAACAT+CGG | - | chr7_4:64082007-64082026 | Msa1170670:CDS | 45.0% | |
| !! | CAGGGTGCTGAAAAGAAAAG+AGG | - | chr7_4:64082121-64082140 | Msa1170670:intron | 45.0% |
| AGAAAGCTCCAAGTTCCAAG+AGG | - | chr7_4:64082185-64082204 | Msa1170670:CDS | 45.0% | |
| GAAAGCTCCAAGTTCCAAGA+GGG | - | chr7_4:64082186-64082205 | Msa1170670:CDS | 45.0% | |
| TTTCTTAGGCTTTGCCCTCT+TGG | + | chr7_4:64082203-64082222 | None:intergenic | 45.0% | |
| ! | TCGAAACAGGCCTGATAATG+AGG | + | chr7_4:64082442-64082461 | None:intergenic | 45.0% |
| ! | TTATGACGGAGGGAAAAGGC+GGG | + | chr7_4:64078747-64078766 | None:intergenic | 50.0% |
| ! | GCCTTTTCCCTCCGTCATAA+AGG | - | chr7_4:64078747-64078766 | Msa1170670:three_prime_UTR | 50.0% |
| CTGGAGATAGTTCGCCAGAT+TGG | - | chr7_4:64079026-64079045 | Msa1170670:CDS | 50.0% | |
| CCATCTTCACCAGAAGGTTG+AGG | + | chr7_4:64079918-64079937 | None:intergenic | 50.0% | |
| CCTCAACCTTCTGGTGAAGA+TGG | - | chr7_4:64079915-64079934 | Msa1170670:intron | 50.0% | |
| CGAAGTCCATCTTCACCAGA+AGG | + | chr7_4:64079924-64079943 | None:intergenic | 50.0% | |
| ! | TCTGGTGAAGATGGACTTCG+TGG | - | chr7_4:64079924-64079943 | Msa1170670:intron | 50.0% |
| ! | GATGGACTTCGTGGCAATGA+CGG | - | chr7_4:64079933-64079952 | Msa1170670:intron | 50.0% |
| GTTTCTCGAAATGGGACAGG+TGG | - | chr7_4:64080172-64080191 | Msa1170670:intron | 50.0% | |
| GGCTGGATAGGCAGTCAATA+TGG | + | chr7_4:64080346-64080365 | None:intergenic | 50.0% | |
| ! | TATTGACTGCCTATCCAGCC+TGG | - | chr7_4:64080346-64080365 | Msa1170670:intron | 50.0% |
| TTCATCGCACAAAGGTCAGG+TGG | - | chr7_4:64080445-64080464 | Msa1170670:CDS | 50.0% | |
| TACTCATCTGGTTGTCCCTG+TGG | + | chr7_4:64080544-64080563 | None:intergenic | 50.0% | |
| CAGGCTCTTGTTGAGTGTCA+AGG | - | chr7_4:64080761-64080780 | Msa1170670:intron | 50.0% | |
| GGTGACTCCATAGATCTGAG+TGG | - | chr7_4:64080782-64080801 | Msa1170670:intron | 50.0% | |
| AGTGGTGATATGGGAGCTGT+AGG | - | chr7_4:64080800-64080819 | Msa1170670:CDS | 50.0% | |
| GTGGTGATATGGGAGCTGTA+GGG | - | chr7_4:64080801-64080820 | Msa1170670:CDS | 50.0% | |
| TGATATGGGAGCTGTAGGGA+GGG | - | chr7_4:64080805-64080824 | Msa1170670:CDS | 50.0% | |
| TTATCTCAGATTCCCCGTCC+GGG | - | chr7_4:64080831-64080850 | Msa1170670:intron | 50.0% | |
| ! | GTGATTAGTCAGCCTTGACC+AGG | - | chr7_4:64081607-64081626 | Msa1170670:CDS | 50.0% |
| CTGACGAGGAAGATGGTAAG+AGG | - | chr7_4:64081919-64081938 | Msa1170670:CDS | 50.0% | |
| !! | GTTTTGATCAGTTGGGTGGG+CGG | + | chr7_4:64081952-64081971 | None:intergenic | 50.0% |
| !! | GCTCGTTTTGATCAGTTGGG+TGG | + | chr7_4:64081956-64081975 | None:intergenic | 50.0% |
| !! | GCGTGCTCGTTTTGATCAGT+TGG | + | chr7_4:64081960-64081979 | None:intergenic | 50.0% |
| TGATCAAAACGAGCACGCTG+AGG | - | chr7_4:64081962-64081981 | Msa1170670:CDS | 50.0% | |
| ATTCTTACCAAACCCCGAGC+AGG | - | chr7_4:64082362-64082381 | Msa1170670:intron | 50.0% | |
| AAATTCTCCTGCTCGGGGTT+TGG | + | chr7_4:64082372-64082391 | None:intergenic | 50.0% | |
| GTCACCGGCGAATTAGGAGT+GGG | + | chr7_4:64079206-64079225 | None:intergenic | 55.0% | |
| TGTCACCGGCGAATTAGGAG+TGG | + | chr7_4:64079207-64079226 | None:intergenic | 55.0% | |
| GACAGTGTCACCGGCGAATT+AGG | + | chr7_4:64079212-64079231 | None:intergenic | 55.0% | |
| GCTCGATTCAGACACCGACA+AGG | - | chr7_4:64079617-64079636 | Msa1170670:intron | 55.0% | |
| CGAAATGGGACAGGTGGTGA+TGG | - | chr7_4:64080178-64080197 | Msa1170670:intron | 55.0% | |
| GTGATATGGGAGCTGTAGGG+AGG | - | chr7_4:64080804-64080823 | Msa1170670:CDS | 55.0% | |
| TATCTCAGATTCCCCGTCCG+GGG | - | chr7_4:64080832-64080851 | Msa1170670:intron | 55.0% | |
| ACATTTCCTGATCCCCGGAC+GGG | + | chr7_4:64080847-64080866 | None:intergenic | 55.0% | |
| CACATTTCCTGATCCCCGGA+CGG | + | chr7_4:64080848-64080867 | None:intergenic | 55.0% | |
| ACAACGCAAAACGTCCGGCT+AGG | + | chr7_4:64081296-64081315 | None:intergenic | 55.0% | |
| !! | GGTTAGCTTTGGGCAGACAG+AGG | - | chr7_4:64081458-64081477 | Msa1170670:intron | 55.0% |
| CTTTGGGCAGACAGAGGCAA+AGG | - | chr7_4:64081464-64081483 | Msa1170670:intron | 55.0% | |
| GGCTTTGCCCTCTTGGAACT+TGG | + | chr7_4:64082196-64082215 | None:intergenic | 55.0% | |
| GGTGCCCACTCCTAATTCGC+CGG | - | chr7_4:64079199-64079218 | Msa1170670:intron | 60.0% | |
| CATTTCCTGATCCCCGGACG+GGG | + | chr7_4:64080846-64080865 | None:intergenic | 60.0% | |
| CACGCTGAGGAACAGACACC+TGG | - | chr7_4:64081975-64081994 | Msa1170670:CDS | 60.0% | |
| AGATTCCCCGTCCGGGGATC+AGG | - | chr7_4:64080838-64080857 | Msa1170670:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 64078733 | 64082514 | 64078733 | ID=Msa1170670;Name=Msa1170670 |
| chr7_4 | mRNA | 64078733 | 64082514 | 64078733 | ID=Msa1170670-mRNA-1;Parent=Msa1170670;Name=Msa1170670-mRNA-1;_AED=0.11;_eAED=0.11;_QI=74|1|1|1|0.91|0.84|13|289|412 |
| chr7_4 | exon | 64078733 | 64079123 | 64078733 | ID=Msa1170670-mRNA-1:exon:20627;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64079219 | 64079355 | 64079219 | ID=Msa1170670-mRNA-1:exon:20626;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64079492 | 64079567 | 64079492 | ID=Msa1170670-mRNA-1:exon:20625;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64079762 | 64079788 | 64079762 | ID=Msa1170670-mRNA-1:exon:20624;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64079934 | 64079980 | 64079934 | ID=Msa1170670-mRNA-1:exon:20623;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64080366 | 64080483 | 64080366 | ID=Msa1170670-mRNA-1:exon:20622;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64080789 | 64080842 | 64080789 | ID=Msa1170670-mRNA-1:exon:20621;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64080995 | 64081056 | 64080995 | ID=Msa1170670-mRNA-1:exon:20620;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64081179 | 64081431 | 64081179 | ID=Msa1170670-mRNA-1:exon:20619;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64081594 | 64081655 | 64081594 | ID=Msa1170670-mRNA-1:exon:20618;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64081795 | 64082047 | 64081795 | ID=Msa1170670-mRNA-1:exon:20617;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64082184 | 64082269 | 64082184 | ID=Msa1170670-mRNA-1:exon:20616;Parent=Msa1170670-mRNA-1 |
| chr7_4 | exon | 64082479 | 64082514 | 64082479 | ID=Msa1170670-mRNA-1:exon:20615;Parent=Msa1170670-mRNA-1 |
| chr7_4 | five_prime_UTR | 64082479 | 64082514 | 64082479 | ID=Msa1170670-mRNA-1:five_prime_utr;Parent=Msa1170670-mRNA-1 |
| chr7_4 | five_prime_UTR | 64082232 | 64082269 | 64082232 | ID=Msa1170670-mRNA-1:five_prime_utr;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64082184 | 64082231 | 64082184 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64081795 | 64082047 | 64081795 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64081594 | 64081655 | 64081594 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64081179 | 64081431 | 64081179 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64080995 | 64081056 | 64080995 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64080789 | 64080842 | 64080789 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64080366 | 64080483 | 64080366 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64079934 | 64079980 | 64079934 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64079762 | 64079788 | 64079762 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64079492 | 64079567 | 64079492 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64079219 | 64079355 | 64079219 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | CDS | 64079022 | 64079123 | 64079022 | ID=Msa1170670-mRNA-1:cds;Parent=Msa1170670-mRNA-1 |
| chr7_4 | three_prime_UTR | 64078733 | 64079021 | 64078733 | ID=Msa1170670-mRNA-1:three_prime_utr;Parent=Msa1170670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
