AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0488880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0488880 MtrunA17_Chr3g0079011 99.281 278 2 0 1 278 1 278 0.0 560
Msa0488880 MtrunA17_Chr8g0356051 89.130 276 29 1 1 275 1 276 0.0 504
Msa0488880 MtrunA17_Chr2g0325011 51.429 280 128 4 3 278 8 283 3.02e-92 274
Msa0488880 MtrunA17_Chr4g0040101 50.566 265 129 2 10 274 12 274 6.93e-89 266
Msa0488880 MtrunA17_Chr5g0444361 56.983 179 75 2 1 178 1 178 3.03e-62 194
Msa0488880 MtrunA17_Chr5g0444371 51.685 178 61 2 1 178 2 154 2.01e-50 163
Msa0488880 MtrunA17_Chr6g0449171 58.955 134 17 1 91 224 1 96 1.16e-41 139
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0488880 AT5G40770.1 82.609 276 47 1 1 275 1 276 4.84e-171 474
Msa0488880 AT3G27280.1 80.645 279 53 1 1 278 1 279 7.06e-169 468
Msa0488880 AT3G27280.2 80.645 279 53 1 1 278 1 279 7.06e-169 468
Msa0488880 AT5G14300.1 66.171 269 64 2 11 278 4 246 1.47e-118 340
Msa0488880 AT1G03860.1 52.239 268 122 2 1 263 1 267 5.98e-92 274
Msa0488880 AT1G03860.3 52.239 268 122 2 1 263 1 267 5.98e-92 274
Msa0488880 AT4G28510.1 51.969 254 121 1 10 263 15 267 4.22e-89 266
Msa0488880 AT5G44140.1 52.157 255 121 1 10 264 15 268 8.80e-87 260
Msa0488880 AT2G20530.2 50.996 251 121 2 13 263 17 265 1.73e-85 257
Msa0488880 AT2G20530.1 50.996 251 121 2 13 263 17 265 1.73e-85 257
Msa0488880 AT1G03860.2 54.680 203 91 1 61 263 1 202 7.76e-74 225

Find 109 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAGGTTTCGGCTCTTGTT+AGG 0.240010 3_4:-9016408 Msa0488880:CDS
TTATCAACCATTTAGCTCTA+AGG 0.256935 3_4:-9013543 Msa0488880:three_prime_UTR
CCTAATGTCTCTTACCTTCC+TGG 0.262402 3_4:-9014746 Msa0488880:CDS
CTAAGGGTACTTGTGTGTTT+GGG 0.268967 3_4:-9013526 Msa0488880:three_prime_UTR
TCTAAGGGTACTTGTGTGTT+TGG 0.275144 3_4:-9013527 Msa0488880:three_prime_UTR
TACGGATAGGCCTCAGGTTT+CGG 0.283193 3_4:-9016419 Msa0488880:CDS
TCTGATGCTACTGCTGTTGC+TGG 0.297902 3_4:-9014836 Msa0488880:CDS
TTAGGAGGATTGAGGCTTCC+AGG 0.308845 3_4:-9014796 Msa0488880:CDS
ATTCACCATCTGAAGATCTT+TGG 0.335078 3_4:+9017833 None:intergenic
GTAGGAAGACGTTGAGTATC+AGG 0.347514 3_4:+9017786 None:intergenic
TGCTACTGCTGTTGCTGGTA+TGG 0.357125 3_4:-9014831 Msa0488880:CDS
CAAGTACCCTTAGAGCTAAA+TGG 0.365819 3_4:+9013536 None:intergenic
GCTACTGCTGTTGCTGGTAT+GGG 0.368570 3_4:-9014830 Msa0488880:CDS
GCTATTACTCATTTGTCATA+TGG 0.377706 3_4:-9016334 Msa0488880:CDS
AACCTCGCACGCGTCGCATT+CGG 0.385015 3_4:-9018056 Msa0488880:CDS
AAGAGAGAGAAGAGAGAGAA+AGG 0.390526 3_4:+9018138 None:intergenic
GAAATGAAAAGAAAGGGTTT+TGG 0.394266 3_4:+9018204 None:intergenic
GCACGCGTCGCATTCGGTCT+CGG 0.405011 3_4:-9018050 Msa0488880:CDS
CAGGGAAATTGCCGCTACTT+TGG 0.409034 3_4:-9014777 Msa0488880:CDS
AGTTCCTTCGCCAACTGATT+CGG 0.418731 3_4:+9017938 None:intergenic
TGTTGTGATGAAGGCGGAAC+AGG 0.423261 3_4:-9014915 Msa0488880:CDS
GTATGGGGTTGATTGAGCTT+AGG 0.424876 3_4:-9014814 Msa0488880:CDS
TGGTTATTTGTCGTGGTAGT+TGG 0.428083 3_4:-9013462 Msa0488880:three_prime_UTR
CCAGGAAGGTAAGAGACATT+AGG 0.436894 3_4:+9014746 None:intergenic
TAATGCTGATCAGCTTCTTA+CGG 0.440478 3_4:-9016437 Msa0488880:CDS
TGCTGCTTGATTGCTTCCCA+TGG 0.442091 3_4:+9018091 None:intergenic
TCAGGTTTCGGCTCTTGTTA+GGG 0.442315 3_4:-9016407 Msa0488880:CDS
CCGAGATTCTGAACAATAGT+AGG 0.443468 3_4:+9017768 None:intergenic
CCTACTATTGTTCAGAATCT+CGG 0.444298 3_4:-9017768 Msa0488880:CDS
AGAGGAGTTGACGGCGGTTG+CGG 0.445413 3_4:+9018022 None:intergenic
GTCTAAGTTTGTTGTGATGA+AGG 0.448310 3_4:-9014924 Msa0488880:CDS
AGAGAGAGAAGAGAGAGAAA+GGG 0.448665 3_4:+9018139 None:intergenic
GTAATGATATTACCGATTGA+AGG 0.458986 3_4:+9017720 None:intergenic
GCTTCTTACGGATAGGCCTC+AGG 0.461424 3_4:-9016425 Msa0488880:CDS
ATTTGTCGTGGTAGTTGGAT+TGG 0.463165 3_4:-9013457 Msa0488880:three_prime_UTR
AAACCTTGCTCAGATGAGAT+AGG 0.471367 3_4:+9013703 None:intergenic
TGGGGTTGATTGAGCTTAGG+AGG 0.474046 3_4:-9014811 Msa0488880:CDS
ATGAAGTGAAATGAAAAGAA+AGG 0.483215 3_4:+9018197 None:intergenic
AAGATCTTTGGTACCGGAGA+TGG 0.484185 3_4:+9017845 None:intergenic
GGCGCGTTGGCCACCGTCGA+CGG 0.487014 3_4:+9017992 None:intergenic
GTGTCATGGCATGCTTGGAT+TGG 0.493671 3_4:-9013786 Msa0488880:three_prime_UTR
TATCAACCATTTAGCTCTAA+GGG 0.495611 3_4:-9013542 Msa0488880:three_prime_UTR
GAAGCAGGTGGCACAGCAAG+AGG 0.501217 3_4:-9014954 Msa0488880:CDS
ACAACTCTTAACAGGTAATG+AGG 0.502279 3_4:-9016485 Msa0488880:intron
TGAAGTGAAATGAAAAGAAA+GGG 0.504220 3_4:+9018198 None:intergenic
TGGATTGGATCATTGCCGCT+TGG 0.507495 3_4:-9013771 Msa0488880:three_prime_UTR
GTTGGATTGGAGAGTTAAAG+AGG 0.512717 3_4:-9013444 Msa0488880:three_prime_UTR
GTCCTCTTCGACAGATTTCG+CGG 0.514877 3_4:-9017969 Msa0488880:CDS
GATTGAGCTTAGGAGGATTG+AGG 0.519488 3_4:-9014804 Msa0488880:CDS
TAGGGATAGTCTTGTGAGAA+GGG 0.523460 3_4:-9016389 Msa0488880:CDS
GAACTCATTTCCTCATCCCA+TGG 0.525793 3_4:-9017920 Msa0488880:CDS
TAAGGGTACTTGTGTGTTTG+GGG 0.526207 3_4:-9013525 Msa0488880:three_prime_UTR
GAGAAGGTTCTTCCTTCAAT+CGG 0.527364 3_4:-9017732 Msa0488880:intron
CAAAGTAGCGGCAATTTCCC+TGG 0.531408 3_4:+9014778 None:intergenic
CATATGGTGGTGAATTCTCT+AGG 0.533003 3_4:-9016318 Msa0488880:intron
TTAGGGATAGTCTTGTGAGA+AGG 0.533036 3_4:-9016390 Msa0488880:CDS
AAGTAGAATATTGAAATCCT+TGG 0.533739 3_4:+9016366 None:intergenic
TGCTGCGATCATCCGTGCTG+AGG 0.540308 3_4:-9014885 Msa0488880:CDS
CACACATTCTCATCCATCTC+CGG 0.540413 3_4:-9017858 Msa0488880:CDS
CAGGGCTGTTGAGCAGAAGC+AGG 0.541558 3_4:-9014969 Msa0488880:CDS
CTTAATCCTTCACGTTGATG+AGG 0.542506 3_4:-9014701 Msa0488880:exon
GGGTACTTGTGTGTTTGGGG+TGG 0.543437 3_4:-9013522 Msa0488880:three_prime_UTR
TAGGAGGATTGAGGCTTCCA+GGG 0.548350 3_4:-9014795 Msa0488880:CDS
GGAGTTGACGGCGGTTGCGG+CGG 0.549095 3_4:+9018025 None:intergenic
ACAAAAGTTAGAAATGAACT+TGG 0.549173 3_4:-9013664 Msa0488880:three_prime_UTR
GTAAGAGACATTAGGAGACT+TGG 0.549961 3_4:+9014754 None:intergenic
AACTCATTTCCTCATCCCAT+GGG 0.550217 3_4:-9017919 Msa0488880:CDS
GGCATCCTTTCCGAATCAGT+TGG 0.551118 3_4:-9017948 Msa0488880:CDS
ATATTGTGTCATGGCATGCT+TGG 0.563975 3_4:-9013791 Msa0488880:three_prime_UTR
GCTGCGATCATCCGTGCTGA+GGG 0.565939 3_4:-9014884 Msa0488880:CDS
ATTCACATGGTTATTTGTCG+TGG 0.567321 3_4:-9013469 Msa0488880:three_prime_UTR
ATGAGCATGTTCTTTCCACC+AGG 0.569837 3_4:+9014728 None:intergenic
CTACTGCTGTTGCTGGTATG+GGG 0.570866 3_4:-9014829 Msa0488880:CDS
GGTGTAGAGAGAGGAGTTGA+CGG 0.577010 3_4:+9018013 None:intergenic
TTAATCCTTCACGTTGATGA+GGG 0.578078 3_4:-9014700 Msa0488880:intron
CGACGCGTGCGAGGTTTGAG+AGG 0.584250 3_4:+9018063 None:intergenic
TCCTCTCTCTACACCGTCGA+CGG 0.584609 3_4:-9018005 Msa0488880:CDS
GACCGAATGCGACGCGTGCG+AGG 0.589146 3_4:+9018054 None:intergenic
GCGAAATCTGTCGAAGAGGA+CGG 0.590193 3_4:+9017971 None:intergenic
TGGTGGAAAGAACATGCTCA+TGG 0.590341 3_4:-9014726 Msa0488880:CDS
CTGATCAGCTTCTTACGGAT+AGG 0.590505 3_4:-9016432 Msa0488880:CDS
CATCTGAAGATCTTTGGTAC+CGG 0.591404 3_4:+9017839 None:intergenic
TGTCGAAGAGGACGGCGCGT+TGG 0.593060 3_4:+9017979 None:intergenic
GTGCGGATATCGAAGACGTA+AGG 0.598813 3_4:+9017888 None:intergenic
TAGTCTTGTGAGAAGGGCCA+AGG 0.601437 3_4:-9016383 Msa0488880:CDS
GCATGTTCTTTCCACCAGGA+AGG 0.602806 3_4:+9014732 None:intergenic
CGGTCTTGAATATGACGAGA+AGG 0.603923 3_4:-9017748 Msa0488880:CDS
CTTCGCCAACTGATTCGGAA+AGG 0.604722 3_4:+9017943 None:intergenic
ATTACTCATTTGTCATATGG+TGG 0.611449 3_4:-9016331 Msa0488880:CDS
GGCTGTTGAGCAGAAGCAGG+TGG 0.617512 3_4:-9014966 Msa0488880:CDS
CTTTCCGAATCAGTTGGCGA+AGG 0.617636 3_4:-9017942 Msa0488880:CDS
GGATCAATGATATTGTGTCA+TGG 0.620363 3_4:-9013800 Msa0488880:three_prime_UTR
AGGAGACTTGGCCAAAGTAG+CGG 0.624726 3_4:+9014766 None:intergenic
GATCCTATCTCATCTGAGCA+AGG 0.625586 3_4:-9013706 Msa0488880:three_prime_UTR
CATCACTTTCTCCCTCAGCA+CGG 0.638713 3_4:+9014873 None:intergenic
ACCGTCGACGGTGTAGAGAG+AGG 0.647102 3_4:+9018004 None:intergenic
CGGTACCAAAGATCTTCAGA+TGG 0.648258 3_4:-9017838 Msa0488880:CDS
TCTCTCTACACCGTCGACGG+TGG 0.651078 3_4:-9018002 Msa0488880:CDS
TGCCGCGAAATCTGTCGAAG+AGG 0.655098 3_4:+9017967 None:intergenic
GATTACCCTCATCAACGTGA+AGG 0.656755 3_4:+9014695 None:intergenic
TGGCACAGCAAGAGGCAGAG+AGG 0.662475 3_4:-9014946 Msa0488880:CDS
AGAATGTGTGAGGGCGAGTG+CGG 0.667012 3_4:+9017871 None:intergenic
AATGTCTCTTACCTTCCTGG+TGG 0.667494 3_4:-9014743 Msa0488880:CDS
TAAGTTTGTTGTGATGAAGG+CGG 0.672014 3_4:-9014921 Msa0488880:CDS
GAGATGGATGAGAATGTGTG+AGG 0.685119 3_4:+9017861 None:intergenic
AGATGGATGAGAATGTGTGA+GGG 0.691450 3_4:+9017862 None:intergenic
CTAACAAGAGCCGAAACCTG+AGG 0.700849 3_4:+9016409 None:intergenic
TCTAACAAACGAGAGCCAAG+CGG 0.715012 3_4:+9013756 None:intergenic
GTAGAGAGAGGAGTTGACGG+CGG 0.788568 3_4:+9018016 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAATAATAAATAGTTA+AGG - chr3_4:9014439-9014458 Msa0488880:intron 10.0%
!! ATATGATTAATACTAAATAT+TGG + chr3_4:9017235-9017254 None:intergenic 10.0%
!! ATTAAAAAATTGTTGTGTTT+AGG - chr3_4:9013978-9013997 Msa0488880:intron 15.0%
!! TTAAAAAATTGTTGTGTTTA+GGG - chr3_4:9013979-9013998 Msa0488880:intron 15.0%
!!! TTTTTTTAATTAAGGCTAAA+GGG + chr3_4:9014158-9014177 None:intergenic 15.0%
!!! CAATTGTTTTGTAATTTATA+GGG - chr3_4:9014991-9015010 Msa0488880:intron 15.0%
!! AAAAAAACATATTTAAACCT+AGG - chr3_4:9015053-9015072 Msa0488880:intron 15.0%
!! TAAAGAAATTGAATTAGTTA+TGG - chr3_4:9015430-9015449 Msa0488880:intron 15.0%
!! TTGTAAAAAAAAATCACATT+TGG - chr3_4:9015575-9015594 Msa0488880:intron 15.0%
!! TCATTTGATTAAATTAGAAA+AGG - chr3_4:9015794-9015813 Msa0488880:intron 15.0%
!! CAAAAAAAATCTAAATACTA+TGG + chr3_4:9016017-9016036 None:intergenic 15.0%
!! ATTTAAAAATCATAAAGTGT+CGG + chr3_4:9016226-9016245 None:intergenic 15.0%
!! TCTTCTTGATATTAAAAAAA+TGG + chr3_4:9016254-9016273 None:intergenic 15.0%
!! AATTAAAAATATTGGTAAGT+TGG + chr3_4:9016417-9016436 None:intergenic 15.0%
!! GTTCTTGAAATTAAAAATAT+TGG + chr3_4:9016425-9016444 None:intergenic 15.0%
!!! GTTTTTTTAATTAAGGCTAA+AGG + chr3_4:9014159-9014178 None:intergenic 20.0%
!!! TAAATAGTTAAGGGTATAAT+AGG - chr3_4:9014449-9014468 Msa0488880:intron 20.0%
!!! ATTTTTCCAATTAAAATTGC+AGG - chr3_4:9014618-9014637 Msa0488880:intron 20.0%
!!! TTTTTCCAATTAAAATTGCA+GGG - chr3_4:9014619-9014638 Msa0488880:intron 20.0%
!!! GCAATTGTTTTGTAATTTAT+AGG - chr3_4:9014990-9015009 Msa0488880:intron 20.0%
!!! ATTTGTTTGTTTAAGATTCA+GGG - chr3_4:9015453-9015472 Msa0488880:intron 20.0%
!! AATTTCAAGAACTAACTTAT+TGG - chr3_4:9016433-9016452 Msa0488880:CDS 20.0%
!! ATCATGACAATTAATAACTA+GGG + chr3_4:9017288-9017307 None:intergenic 20.0%
!! AATCATGACAATTAATAACT+AGG + chr3_4:9017289-9017308 None:intergenic 20.0%
!! TAAAAATAGATACAAACTTC+GGG + chr3_4:9017352-9017371 None:intergenic 20.0%
!! GTAAAAATAGATACAAACTT+CGG + chr3_4:9017353-9017372 None:intergenic 20.0%
!! GAACTGAAAATATTTAACTA+TGG - chr3_4:9017767-9017786 Msa0488880:CDS 20.0%
!! AATGAAGAAGGAAATTATTA+GGG + chr3_4:9017801-9017820 None:intergenic 20.0%
!! AAATGAAGAAGGAAATTATT+AGG + chr3_4:9017802-9017821 None:intergenic 20.0%
!! AGAAAAATTGAATATTCACA+TGG - chr3_4:9018143-9018162 Msa0488880:intron 20.0%
! TGAAGTGAAATGAAAAGAAA+GGG + chr3_4:9013430-9013449 None:intergenic 25.0%
! ATGAAGTGAAATGAAAAGAA+AGG + chr3_4:9013431-9013450 None:intergenic 25.0%
! ACAGTGTTTACTAAATTTAG+CGG + chr3_4:9014233-9014252 None:intergenic 25.0%
! GTCAAAAGGACTTATAATTT+GGG + chr3_4:9014362-9014381 None:intergenic 25.0%
! AATTACTCTTTCCAATGAAA+TGG + chr3_4:9014384-9014403 None:intergenic 25.0%
! AAGTAACATTAATGCTTCAT+TGG - chr3_4:9014474-9014493 Msa0488880:intron 25.0%
! TTGTAAAGTGACTTATACTT+TGG - chr3_4:9014499-9014518 Msa0488880:intron 25.0%
! TGTAAAGTGACTTATACTTT+GGG - chr3_4:9014500-9014519 Msa0488880:intron 25.0%
!! TTTAGAGCGACTTATAATTT+GGG - chr3_4:9014535-9014554 Msa0488880:intron 25.0%
! TCAGATAAATTTGTAGTGTT+TGG - chr3_4:9014577-9014596 Msa0488880:intron 25.0%
!! TTTTCCAATTAAAATTGCAG+GGG - chr3_4:9014620-9014639 Msa0488880:intron 25.0%
! CATATAAGATTTATCATCCT+AGG + chr3_4:9015073-9015092 None:intergenic 25.0%
! TAAATTTGACAACTCTTAAC+AGG - chr3_4:9015132-9015151 Msa0488880:intron 25.0%
! AAGTAGAATATTGAAATCCT+TGG + chr3_4:9015262-9015281 None:intergenic 25.0%
!!! TTTCTTTCTCTTTTGTTTCT+TGG - chr3_4:9015334-9015353 Msa0488880:intron 25.0%
!! GATTTGTTTGTTTAAGATTC+AGG - chr3_4:9015452-9015471 Msa0488880:intron 25.0%
! TTCTATGATTCAAAACAAAC+AGG + chr3_4:9015479-9015498 None:intergenic 25.0%
! TTGAATCATAGAAGTGATTA+TGG - chr3_4:9015486-9015505 Msa0488880:intron 25.0%
! TTGAATGTAACTTAATGTGT+CGG - chr3_4:9015900-9015919 Msa0488880:intron 25.0%
!!! TGATTTGCTACTTAAATGTA+TGG + chr3_4:9016071-9016090 None:intergenic 25.0%
!! AGTTTAGAATATTGGTAAGT+TGG + chr3_4:9016581-9016600 None:intergenic 25.0%
!!! TTTTGAAGAAATCAAAACAC+AGG + chr3_4:9017000-9017019 None:intergenic 25.0%
! TAATACTAAATATTGGTCGT+GGG + chr3_4:9017228-9017247 None:intergenic 25.0%
! TTAATACTAAATATTGGTCG+TGG + chr3_4:9017229-9017248 None:intergenic 25.0%
! ACTCTAAGTTATTGTCTTAT+TGG - chr3_4:9017569-9017588 Msa0488880:intron 25.0%
! ATGAAGAAGGAAATTATTAG+GGG + chr3_4:9017800-9017819 None:intergenic 25.0%
! ATAATTTCCTTCTTCATTTC+AGG - chr3_4:9017803-9017822 Msa0488880:CDS 25.0%
! TAATTTCCTTCTTCATTTCA+GGG - chr3_4:9017804-9017823 Msa0488880:CDS 25.0%
!!! CATTTCTAACTTTTGTTTTC+AGG + chr3_4:9017957-9017976 None:intergenic 25.0%
! ACAAAAGTTAGAAATGAACT+TGG - chr3_4:9017961-9017980 Msa0488880:CDS 25.0%
! GAAATGAAAAGAAAGGGTTT+TGG + chr3_4:9013424-9013443 None:intergenic 30.0%
!!! TTTTAGGGTTTTGAAGGAAA+TGG + chr3_4:9013466-9013485 None:intergenic 30.0%
! GTAATGATATTACCGATTGA+AGG + chr3_4:9013908-9013927 None:intergenic 30.0%
! GCTTATAGCTTATTTCTTAC+TGG - chr3_4:9014086-9014105 Msa0488880:intron 30.0%
AGCTAACTAATAGCTTATAG+TGG - chr3_4:9014293-9014312 Msa0488880:intron 30.0%
GGTCAAAAGGACTTATAATT+TGG + chr3_4:9014363-9014382 None:intergenic 30.0%
TTTCCAATGAAATGGTCAAA+AGG + chr3_4:9014376-9014395 None:intergenic 30.0%
GTAAAGTGACTTATACTTTG+GGG - chr3_4:9014501-9014520 Msa0488880:intron 30.0%
!! CTTTAGAGCGACTTATAATT+TGG - chr3_4:9014534-9014553 Msa0488880:intron 30.0%
!! TTTACCCCTGCAATTTTAAT+TGG + chr3_4:9014627-9014646 None:intergenic 30.0%
GTAATTTATAGGGACTGAAT+AGG - chr3_4:9015001-9015020 Msa0488880:intron 30.0%
! CAAGTAACTTGTCATTAATG+TGG - chr3_4:9015106-9015125 Msa0488880:intron 30.0%
GCTATTACTCATTTGTCATA+TGG - chr3_4:9015291-9015310 Msa0488880:intron 30.0%
ATTACTCATTTGTCATATGG+TGG - chr3_4:9015294-9015313 Msa0488880:intron 30.0%
GCTTCAAATACAATACAATC+TGG - chr3_4:9015661-9015680 Msa0488880:intron 30.0%
AACAAACACAAATCAGTTCT+AGG + chr3_4:9015730-9015749 None:intergenic 30.0%
TCTATATATCACCAACACTA+AGG + chr3_4:9015949-9015968 None:intergenic 30.0%
GGTGATATATAGACTATATG+AGG - chr3_4:9015956-9015975 Msa0488880:intron 30.0%
TATGGCACTATACAATTTCA+AGG + chr3_4:9015999-9016018 None:intergenic 30.0%
CATTTAAGTAGCAAATCAAG+AGG - chr3_4:9016073-9016092 Msa0488880:intron 30.0%
TTTGATTCATGAGTAATCCT+TGG - chr3_4:9016134-9016153 Msa0488880:intron 30.0%
TTGATTCATGAGTAATCCTT+GGG - chr3_4:9016135-9016154 Msa0488880:intron 30.0%
GAAGACAAGAACTAACTTAA+TGG - chr3_4:9016269-9016288 Msa0488880:intron 30.0%
TATAGTGAGTTAGCATAGTT+AGG + chr3_4:9016332-9016351 None:intergenic 30.0%
!! AATATTGGTAAGTTGGTTCT+AGG + chr3_4:9016410-9016429 None:intergenic 30.0%
! GTCAAGCTAGTTTAGAATAT+TGG + chr3_4:9016589-9016608 None:intergenic 30.0%
!!! TTTTGGTTCTTGCATTTTTG+TGG - chr3_4:9016959-9016978 Msa0488880:intron 30.0%
TATTGCATAGTGTAGTAGAT+TGG + chr3_4:9017176-9017195 None:intergenic 30.0%
TGTATGTGTATGCAAAAATG+TGG + chr3_4:9017326-9017345 None:intergenic 30.0%
GATTATGAAATATTGACGCA+TGG - chr3_4:9017466-9017485 Msa0488880:intron 30.0%
!! TCCATTGTATCAAGTTGTTT+TGG - chr3_4:9017505-9017524 Msa0488880:intron 30.0%
ACCAAAACAACTTGATACAA+TGG + chr3_4:9017509-9017528 None:intergenic 30.0%
TGAAGAAGGAAATTATTAGG+GGG + chr3_4:9017799-9017818 None:intergenic 30.0%
!! TTATCAACCATTTAGCTCTA+AGG - chr3_4:9018082-9018101 Msa0488880:CDS 30.0%
!! TATCAACCATTTAGCTCTAA+GGG - chr3_4:9018083-9018102 Msa0488880:CDS 30.0%
!!! AAAGGGTTTTAGGGTTTTGA+AGG + chr3_4:9013472-9013491 None:intergenic 35.0%
! AAGAGAGAGAAAGGGTTTTA+GGG + chr3_4:9013481-9013500 None:intergenic 35.0%
ATTCACCATCTGAAGATCTT+TGG + chr3_4:9013795-9013814 None:intergenic 35.0%
CCTACTATTGTTCAGAATCT+CGG - chr3_4:9013857-9013876 Msa0488880:intron 35.0%
CTTATCCACTCTTAGCAATA+AGG - chr3_4:9014269-9014288 Msa0488880:intron 35.0%
! ACTGCTAAACTAGCTTATTG+CGG - chr3_4:9014319-9014338 Msa0488880:intron 35.0%
! AGTCCTTTTGACCATTTCAT+TGG - chr3_4:9014370-9014389 Msa0488880:intron 35.0%
! GACTTATAATTTGGGACTGA+GGG - chr3_4:9014543-9014562 Msa0488880:intron 35.0%
TGACTATAAAAGACCCTGTT+TGG + chr3_4:9014775-9014794 None:intergenic 35.0%
ACAACTCTTAACAGGTAATG+AGG - chr3_4:9015140-9015159 Msa0488880:intron 35.0%
TAATGCTGATCAGCTTCTTA+CGG - chr3_4:9015188-9015207 Msa0488880:intron 35.0%
CAAAATAAGCTGCAACAAAC+AGG + chr3_4:9015558-9015577 None:intergenic 35.0%
TATGAGGCAATCTCCAATTT+CGG - chr3_4:9015972-9015991 Msa0488880:intron 35.0%
ACAATTTCAAGGACCGAAAT+TGG + chr3_4:9015988-9016007 None:intergenic 35.0%
!!! TTAATGGTGCCTGTTGTTTT+AGG - chr3_4:9016285-9016304 Msa0488880:intron 35.0%
!!! TTATTGGTGCCTGTTGTTTT+AGG - chr3_4:9016449-9016468 Msa0488880:CDS 35.0%
!!! TATTGGTGCCTGTTGTTTTA+GGG - chr3_4:9016450-9016469 Msa0488880:CDS 35.0%
TCTGTTACAGTTAGCTAGTA+TGG + chr3_4:9016513-9016532 None:intergenic 35.0%
TACAGAGAATCAGAACAGAA+AGG + chr3_4:9016625-9016644 None:intergenic 35.0%
!! GTCTAAGTTTGTTGTGATGA+AGG - chr3_4:9016701-9016720 Msa0488880:intron 35.0%
!! TAAGTTTGTTGTGATGAAGG+CGG - chr3_4:9016704-9016723 Msa0488880:intron 35.0%
! TTAATCCTTCACGTTGATGA+GGG - chr3_4:9016925-9016944 Msa0488880:intron 35.0%
! TGAGGGTAATCACATTGTTT+TGG - chr3_4:9016942-9016961 Msa0488880:intron 35.0%
!! AATTGATTTGCCTGCATTAG+AGG - chr3_4:9017025-9017044 Msa0488880:intron 35.0%
!! CATTTGAACATCGCTTTTCA+AGG + chr3_4:9017129-9017148 None:intergenic 35.0%
CTAGGGTTAATGATTCTGTT+TGG + chr3_4:9017271-9017290 None:intergenic 35.0%
TGTGTATGCAAAAATGTGGA+TGG + chr3_4:9017322-9017341 None:intergenic 35.0%
CAACCAACCACTAATTATTC+CGG + chr3_4:9017648-9017667 None:intergenic 35.0%
CATCAGGATGCTATATGTTT+AGG - chr3_4:9017712-9017731 Msa0488880:intron 35.0%
GAAGAAGGAAATTATTAGGG+GGG + chr3_4:9017798-9017817 None:intergenic 35.0%
ATTGATCCCTGAAATGAAGA+AGG + chr3_4:9017813-9017832 None:intergenic 35.0%
GGATCAATGATATTGTGTCA+TGG - chr3_4:9017825-9017844 Msa0488880:CDS 35.0%
! GGGTGGTTTCTACATTTTTA+TGG - chr3_4:9018120-9018139 Msa0488880:intron 35.0%
ATTCACATGGTTATTTGTCG+TGG - chr3_4:9018156-9018175 Msa0488880:five_prime_UTR 35.0%
! GAAGAGAGAGAAAGGGTTTT+AGG + chr3_4:9013482-9013501 None:intergenic 40.0%
AGAGAGAGAAGAGAGAGAAA+GGG + chr3_4:9013489-9013508 None:intergenic 40.0%
AAGAGAGAGAAGAGAGAGAA+AGG + chr3_4:9013490-9013509 None:intergenic 40.0%
AACTCATTTCCTCATCCCAT+GGG - chr3_4:9013706-9013725 Msa0488880:three_prime_UTR 40.0%
AGATGGATGAGAATGTGTGA+GGG + chr3_4:9013766-9013785 None:intergenic 40.0%
CATCTGAAGATCTTTGGTAC+CGG + chr3_4:9013789-9013808 None:intergenic 40.0%
CCGAGATTCTGAACAATAGT+AGG + chr3_4:9013860-9013879 None:intergenic 40.0%
GAGAAGGTTCTTCCTTCAAT+CGG - chr3_4:9013893-9013912 Msa0488880:intron 40.0%
! TGTTGTGTTTAGGGTCTGTT+TGG - chr3_4:9013988-9014007 Msa0488880:intron 40.0%
! GCTTATTTCTTACTGGCGTA+TGG - chr3_4:9014093-9014112 Msa0488880:intron 40.0%
AGCTACCTTATTGCTAAGAG+TGG + chr3_4:9014277-9014296 None:intergenic 40.0%
! CGACTTATAATTTGGGACTG+AGG - chr3_4:9014542-9014561 Msa0488880:intron 40.0%
ACAGTTACCAAACACCAAAC+AGG - chr3_4:9014758-9014777 Msa0488880:CDS 40.0%
CAGTTACCAAACACCAAACA+GGG - chr3_4:9014759-9014778 Msa0488880:CDS 40.0%
!! AAAAGACCCTGTTTGGTGTT+TGG + chr3_4:9014768-9014787 None:intergenic 40.0%
!! TGTTAGCTTGTTGGGTTGTA+TGG + chr3_4:9014957-9014976 None:intergenic 40.0%
AACCCAACAAGCTAACATCA+GGG - chr3_4:9014960-9014979 Msa0488880:CDS 40.0%
!! TTAGGGATAGTCTTGTGAGA+AGG - chr3_4:9015235-9015254 Msa0488880:intron 40.0%
!! TAGGGATAGTCTTGTGAGAA+GGG - chr3_4:9015236-9015255 Msa0488880:intron 40.0%
! CATATGGTGGTGAATTCTCT+AGG - chr3_4:9015307-9015326 Msa0488880:intron 40.0%
ACTTGCGAACGTGTAACAAA+CGG - chr3_4:9015874-9015893 Msa0488880:intron 40.0%
ACTTGGTCACCTAAAACAAC+AGG + chr3_4:9016297-9016316 None:intergenic 40.0%
TTAGGAGTGAAAGCTCAACT+TGG + chr3_4:9016314-9016333 None:intergenic 40.0%
AACTTGGTCCCTAAAACAAC+AGG + chr3_4:9016461-9016480 None:intergenic 40.0%
TTACGAGCGAATGCTAAACT+TGG + chr3_4:9016477-9016496 None:intergenic 40.0%
TCTCTGTACGATCCAATATC+AGG - chr3_4:9016637-9016656 Msa0488880:intron 40.0%
CTCTGTACGATCCAATATCA+GGG - chr3_4:9016638-9016657 Msa0488880:intron 40.0%
GTAAGAGACATTAGGAGACT+TGG + chr3_4:9016874-9016893 None:intergenic 40.0%
CTTAATCCTTCACGTTGATG+AGG - chr3_4:9016924-9016943 Msa0488880:intron 40.0%
AGATACTCAACCTCTAATGC+AGG + chr3_4:9017038-9017057 None:intergenic 40.0%
CCAAGGCAAGCAAATCAAAT+TGG + chr3_4:9017080-9017099 None:intergenic 40.0%
!! CCAATTTGATTTGCTTGCCT+TGG - chr3_4:9017077-9017096 Msa0488880:intron 40.0%
! AGAAGTGCAGTACGTTGTTT+GGG + chr3_4:9017152-9017171 None:intergenic 40.0%
AACTGACAGATACTGTCAAC+TGG + chr3_4:9017380-9017399 None:intergenic 40.0%
AACCACTAATTATTCCGGAG+AGG + chr3_4:9017643-9017662 None:intergenic 40.0%
TCTCCGGAATAATTAGTGGT+TGG - chr3_4:9017642-9017661 Msa0488880:intron 40.0%
ATATTGTGTCATGGCATGCT+TGG - chr3_4:9017834-9017853 Msa0488880:CDS 40.0%
AAACCTTGCTCAGATGAGAT+AGG + chr3_4:9017925-9017944 None:intergenic 40.0%
CAAGTACCCTTAGAGCTAAA+TGG + chr3_4:9018092-9018111 None:intergenic 40.0%
!! TCTAAGGGTACTTGTGTGTT+TGG - chr3_4:9018098-9018117 Msa0488880:exon 40.0%
!! CTAAGGGTACTTGTGTGTTT+GGG - chr3_4:9018099-9018118 Msa0488880:exon 40.0%
!! TAAGGGTACTTGTGTGTTTG+GGG - chr3_4:9018100-9018119 Msa0488880:exon 40.0%
TGGTTATTTGTCGTGGTAGT+TGG - chr3_4:9018163-9018182 Msa0488880:five_prime_UTR 40.0%
ATTTGTCGTGGTAGTTGGAT+TGG - chr3_4:9018168-9018187 Msa0488880:five_prime_UTR 40.0%
! GTTGGATTGGAGAGTTAAAG+AGG - chr3_4:9018181-9018200 Msa0488880:five_prime_UTR 40.0%
TCTCTCTCTCTCTCTAACCA+TGG - chr3_4:9013517-9013536 Msa0488880:three_prime_UTR 45.0%
CTCTCTCTCTCTCTAACCAT+GGG - chr3_4:9013518-9013537 Msa0488880:three_prime_UTR 45.0%
AGTTCCTTCGCCAACTGATT+CGG + chr3_4:9013690-9013709 None:intergenic 45.0%
GAACTCATTTCCTCATCCCA+TGG - chr3_4:9013705-9013724 Msa0488880:three_prime_UTR 45.0%
! CGTAAGGCTTTTGAACCCAT+GGG + chr3_4:9013724-9013743 None:intergenic 45.0%
! ACGTAAGGCTTTTGAACCCA+TGG + chr3_4:9013725-9013744 None:intergenic 45.0%
GAGATGGATGAGAATGTGTG+AGG + chr3_4:9013767-9013786 None:intergenic 45.0%
CACACATTCTCATCCATCTC+CGG - chr3_4:9013767-9013786 Msa0488880:three_prime_UTR 45.0%
! AAGATCTTTGGTACCGGAGA+TGG + chr3_4:9013783-9013802 None:intergenic 45.0%
CGGTACCAAAGATCTTCAGA+TGG - chr3_4:9013787-9013806 Msa0488880:three_prime_UTR 45.0%
GTAGGAAGACGTTGAGTATC+AGG + chr3_4:9013842-9013861 None:intergenic 45.0%
CGGTCTTGAATATGACGAGA+AGG - chr3_4:9013877-9013896 Msa0488880:intron 45.0%
! GGCGTGATTTTGGATCTGTT+TGG + chr3_4:9014936-9014955 None:intergenic 45.0%
! TGGGTTGTATGGCGTGATTT+TGG + chr3_4:9014946-9014965 None:intergenic 45.0%
CAACCCAACAAGCTAACATC+AGG - chr3_4:9014959-9014978 Msa0488880:CDS 45.0%
ACCCAACAAGCTAACATCAG+GGG - chr3_4:9014961-9014980 Msa0488880:CDS 45.0%
CTGATCAGCTTCTTACGGAT+AGG - chr3_4:9015193-9015212 Msa0488880:intron 45.0%
TCAGGTTTCGGCTCTTGTTA+GGG - chr3_4:9015218-9015237 Msa0488880:intron 45.0%
CTTGCGAACGTGTAACAAAC+GGG - chr3_4:9015875-9015894 Msa0488880:intron 45.0%
!! TTAATGTGTCGGTGTCGTGT+TGG - chr3_4:9015911-9015930 Msa0488880:intron 45.0%
!! TCCTTGGGACTGATTTGATG+AGG - chr3_4:9016150-9016169 Msa0488880:intron 45.0%
ACCTCATCAAATCAGTCCCA+AGG + chr3_4:9016154-9016173 None:intergenic 45.0%
CTAGCTTGACATTCCTGAAG+TGG - chr3_4:9016599-9016618 Msa0488880:intron 45.0%
! GTATGGGGTTGATTGAGCTT+AGG - chr3_4:9016811-9016830 Msa0488880:intron 45.0%
GATTGAGCTTAGGAGGATTG+AGG - chr3_4:9016821-9016840 Msa0488880:intron 45.0%
CCAGGAAGGTAAGAGACATT+AGG + chr3_4:9016882-9016901 None:intergenic 45.0%
CCTAATGTCTCTTACCTTCC+TGG - chr3_4:9016879-9016898 Msa0488880:intron 45.0%
AATGTCTCTTACCTTCCTGG+TGG - chr3_4:9016882-9016901 Msa0488880:intron 45.0%
ATGAGCATGTTCTTTCCACC+AGG + chr3_4:9016900-9016919 None:intergenic 45.0%
TGGTGGAAAGAACATGCTCA+TGG - chr3_4:9016899-9016918 Msa0488880:intron 45.0%
GATTACCCTCATCAACGTGA+AGG + chr3_4:9016933-9016952 None:intergenic 45.0%
ACTAACTGATGCGACTTCCA+AGG + chr3_4:9017097-9017116 None:intergenic 45.0%
! CAGAAGTGCAGTACGTTGTT+TGG + chr3_4:9017153-9017172 None:intergenic 45.0%
TATTCCGGAGAGGCAGAAAA+GGG + chr3_4:9017633-9017652 None:intergenic 45.0%
TTATTCCGGAGAGGCAGAAA+AGG + chr3_4:9017634-9017653 None:intergenic 45.0%
TGCCTCTCCGGAATAATTAG+TGG - chr3_4:9017638-9017657 Msa0488880:intron 45.0%
TGTTCCTCTAGCGTATCATC+AGG - chr3_4:9017696-9017715 Msa0488880:intron 45.0%
TCTAACAAACGAGAGCCAAG+CGG + chr3_4:9017872-9017891 None:intergenic 45.0%
GATCCTATCTCATCTGAGCA+AGG - chr3_4:9017919-9017938 Msa0488880:CDS 45.0%
!!! AATTATTGTTTTTTTAATTA+AGG + chr3_4:9014166-9014185 None:intergenic 5.0%
!! AAAAAATAATAAATAGTTAA+GGG - chr3_4:9014440-9014459 Msa0488880:intron 5.0%
! TGCTGCTTGATTGCTTCCCA+TGG + chr3_4:9013537-9013556 None:intergenic 50.0%
GGTGTAGAGAGAGGAGTTGA+CGG + chr3_4:9013615-9013634 None:intergenic 50.0%
GCGAAATCTGTCGAAGAGGA+CGG + chr3_4:9013657-9013676 None:intergenic 50.0%
GTCCTCTTCGACAGATTTCG+CGG - chr3_4:9013656-9013675 Msa0488880:three_prime_UTR 50.0%
GGCATCCTTTCCGAATCAGT+TGG - chr3_4:9013677-9013696 Msa0488880:three_prime_UTR 50.0%
!! CTTCGCCAACTGATTCGGAA+AGG + chr3_4:9013685-9013704 None:intergenic 50.0%
CTTTCCGAATCAGTTGGCGA+AGG - chr3_4:9013683-9013702 Msa0488880:three_prime_UTR 50.0%
! GCTTTTGAACCCATGGGATG+AGG + chr3_4:9013718-9013737 None:intergenic 50.0%
GTGCGGATATCGAAGACGTA+AGG + chr3_4:9013740-9013759 None:intergenic 50.0%
!! GCCCCTGATGTTAGCTTGTT+GGG + chr3_4:9014965-9014984 None:intergenic 50.0%
!! AGCCCCTGATGTTAGCTTGT+TGG + chr3_4:9014966-9014985 None:intergenic 50.0%
TACGGATAGGCCTCAGGTTT+CGG - chr3_4:9015206-9015225 Msa0488880:intron 50.0%
CTAACAAGAGCCGAAACCTG+AGG + chr3_4:9015219-9015238 None:intergenic 50.0%
CTCAGGTTTCGGCTCTTGTT+AGG - chr3_4:9015217-9015236 Msa0488880:intron 50.0%
!! TAGTCTTGTGAGAAGGGCCA+AGG - chr3_4:9015242-9015261 Msa0488880:intron 50.0%
CACTCGACACACCTTAGTGT+TGG - chr3_4:9015935-9015954 Msa0488880:intron 50.0%
CAGAACAGAAAGGCCACTTC+AGG + chr3_4:9016615-9016634 None:intergenic 50.0%
CTGCTCAACAGCCCTGATAT+TGG + chr3_4:9016652-9016671 None:intergenic 50.0%
TGTTGTGATGAAGGCGGAAC+AGG - chr3_4:9016710-9016729 Msa0488880:intron 50.0%
CATCACTTTCTCCCTCAGCA+CGG + chr3_4:9016755-9016774 None:intergenic 50.0%
TCTGATGCTACTGCTGTTGC+TGG - chr3_4:9016789-9016808 Msa0488880:intron 50.0%
TGCTACTGCTGTTGCTGGTA+TGG - chr3_4:9016794-9016813 Msa0488880:intron 50.0%
GCTACTGCTGTTGCTGGTAT+GGG - chr3_4:9016795-9016814 Msa0488880:intron 50.0%
CTACTGCTGTTGCTGGTATG+GGG - chr3_4:9016796-9016815 Msa0488880:intron 50.0%
! TGGGGTTGATTGAGCTTAGG+AGG - chr3_4:9016814-9016833 Msa0488880:intron 50.0%
TTAGGAGGATTGAGGCTTCC+AGG - chr3_4:9016829-9016848 Msa0488880:intron 50.0%
TAGGAGGATTGAGGCTTCCA+GGG - chr3_4:9016830-9016849 Msa0488880:intron 50.0%
CAAAGTAGCGGCAATTTCCC+TGG + chr3_4:9016850-9016869 None:intergenic 50.0%
CAGGGAAATTGCCGCTACTT+TGG - chr3_4:9016848-9016867 Msa0488880:intron 50.0%
AGGAGACTTGGCCAAAGTAG+CGG + chr3_4:9016862-9016881 None:intergenic 50.0%
GCATGTTCTTTCCACCAGGA+AGG + chr3_4:9016896-9016915 None:intergenic 50.0%
GCATCCTGATGATACGCTAG+AGG + chr3_4:9017703-9017722 None:intergenic 50.0%
GTGTCATGGCATGCTTGGAT+TGG - chr3_4:9017839-9017858 Msa0488880:CDS 50.0%
! TGGATTGGATCATTGCCGCT+TGG - chr3_4:9017854-9017873 Msa0488880:CDS 50.0%
GTAGAGAGAGGAGTTGACGG+CGG + chr3_4:9013612-9013631 None:intergenic 55.0%
TCCTCTCTCTACACCGTCGA+CGG - chr3_4:9013620-9013639 Msa0488880:three_prime_UTR 55.0%
TGCCGCGAAATCTGTCGAAG+AGG + chr3_4:9013661-9013680 None:intergenic 55.0%
AGAATGTGTGAGGGCGAGTG+CGG + chr3_4:9013757-9013776 None:intergenic 55.0%
GCTTCTTACGGATAGGCCTC+AGG - chr3_4:9015200-9015219 Msa0488880:intron 55.0%
GAGTCGCGAATACTGACACG+TGG - chr3_4:9015393-9015412 Msa0488880:intron 55.0%
GAGGCAGAAAAGGGTAGGAC+TGG + chr3_4:9017624-9017643 None:intergenic 55.0%
! CCTACCCTTTTCTGCCTCTC+CGG - chr3_4:9017626-9017645 Msa0488880:intron 55.0%
GGGTACTTGTGTGTTTGGGG+TGG - chr3_4:9018103-9018122 Msa0488880:exon 55.0%
AACCTCGCACGCGTCGCATT+CGG - chr3_4:9013569-9013588 Msa0488880:three_prime_UTR 60.0%
AGAGGAGTTGACGGCGGTTG+CGG + chr3_4:9013606-9013625 None:intergenic 60.0%
ACCGTCGACGGTGTAGAGAG+AGG + chr3_4:9013624-9013643 None:intergenic 60.0%
TCTCTCTACACCGTCGACGG+TGG - chr3_4:9013623-9013642 Msa0488880:three_prime_UTR 60.0%
CAGGGCTGTTGAGCAGAAGC+AGG - chr3_4:9016656-9016675 Msa0488880:intron 60.0%
GGCTGTTGAGCAGAAGCAGG+TGG - chr3_4:9016659-9016678 Msa0488880:intron 60.0%
GAAGCAGGTGGCACAGCAAG+AGG - chr3_4:9016671-9016690 Msa0488880:intron 60.0%
TGGCACAGCAAGAGGCAGAG+AGG - chr3_4:9016679-9016698 Msa0488880:intron 60.0%
TGCTGCGATCATCCGTGCTG+AGG - chr3_4:9016740-9016759 Msa0488880:intron 60.0%
GCTGCGATCATCCGTGCTGA+GGG - chr3_4:9016741-9016760 Msa0488880:intron 60.0%
TGGTCGTGGGCATGCAGATC+TGG + chr3_4:9017215-9017234 None:intergenic 60.0%
CCGGAGAGGCAGAAAAGGGT+AGG + chr3_4:9017629-9017648 None:intergenic 60.0%
CGACGCGTGCGAGGTTTGAG+AGG + chr3_4:9013565-9013584 None:intergenic 65.0%
GCACGCGTCGCATTCGGTCT+CGG - chr3_4:9013575-9013594 Msa0488880:three_prime_UTR 65.0%
TGTCGAAGAGGACGGCGCGT+TGG + chr3_4:9013649-9013668 None:intergenic 65.0%
GACCGAATGCGACGCGTGCG+AGG + chr3_4:9013574-9013593 None:intergenic 70.0%
GGAGTTGACGGCGGTTGCGG+CGG + chr3_4:9013603-9013622 None:intergenic 70.0%
! GGCGCGTTGGCCACCGTCGA+CGG + chr3_4:9013636-9013655 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 9013411 9018236 9013411 ID=Msa0488880;Name=Msa0488880
chr3_4 mRNA 9013411 9018236 9013411 ID=Msa0488880-mRNA-1;Parent=Msa0488880;Name=Msa0488880-mRNA-1;_AED=0.03;_eAED=0.03;_QI=105|1|1|1|0.5|0.2|5|417|278
chr3_4 exon 9013411 9013822 9013411 ID=Msa0488880-mRNA-1:exon:2969;Parent=Msa0488880-mRNA-1
chr3_4 exon 9014701 9014988 9014701 ID=Msa0488880-mRNA-1:exon:2968;Parent=Msa0488880-mRNA-1
chr3_4 exon 9016319 9016493 9016319 ID=Msa0488880-mRNA-1:exon:2967;Parent=Msa0488880-mRNA-1
chr3_4 exon 9017733 9018128 9017733 ID=Msa0488880-mRNA-1:exon:2966;Parent=Msa0488880-mRNA-1
chr3_4 exon 9018149 9018236 9018149 ID=Msa0488880-mRNA-1:exon:2965;Parent=Msa0488880-mRNA-1
chr3_4 five_prime_UTR 9018149 9018236 9018149 ID=Msa0488880-mRNA-1:five_prime_utr;Parent=Msa0488880-mRNA-1
chr3_4 five_prime_UTR 9018112 9018128 9018112 ID=Msa0488880-mRNA-1:five_prime_utr;Parent=Msa0488880-mRNA-1
chr3_4 CDS 9017733 9018111 9017733 ID=Msa0488880-mRNA-1:cds;Parent=Msa0488880-mRNA-1
chr3_4 CDS 9016319 9016493 9016319 ID=Msa0488880-mRNA-1:cds;Parent=Msa0488880-mRNA-1
chr3_4 CDS 9014706 9014988 9014706 ID=Msa0488880-mRNA-1:cds;Parent=Msa0488880-mRNA-1
chr3_4 three_prime_UTR 9014701 9014705 9014701 ID=Msa0488880-mRNA-1:three_prime_utr;Parent=Msa0488880-mRNA-1
chr3_4 three_prime_UTR 9013411 9013822 9013411 ID=Msa0488880-mRNA-1:three_prime_utr;Parent=Msa0488880-mRNA-1
Gene Sequence

>Msa0488880

ATGGGAAGCAATCAAGCAGCAAACATCCTCTCAAACCTCGCACGCGTCGCATTCGGTCTCGGCGCCGCCGCAACCGCCGTCAACTCCTCTCTCTACACCGTCGACGGTGGCCAACGCGCCGTCCTCTTCGACAGATTTCGCGGCATCCTTTCCGAATCAGTTGGCGAAGGAACTCATTTCCTCATCCCATGGGTTCAAAAGCCTTACGTCTTCGATATCCGCACTCGCCCTCACACATTCTCATCCATCTCCGGTACCAAAGATCTTCAGATGGTGAATCTCACTCTTCGTGTTCTCTCTCGTCCTGATACTCAACGTCTTCCTACTATTGTTCAGAATCTCGGTCTTGAATATGACGAGAAGGTTCTTCCTTCAATCGGTAATGAGGTTTTGAAAGCTGTTGTTGCTCAGTTTAATGCTGATCAGCTTCTTACGGATAGGCCTCAGGTTTCGGCTCTTGTTAGGGATAGTCTTGTGAGAAGGGCCAAGGATTTCAATATTCTACTTGATGATGTTGCTATTACTCATTTGTCATATGGTGGTGAATTCTCTAGGGCTGTTGAGCAGAAGCAGGTGGCACAGCAAGAGGCAGAGAGGTCTAAGTTTGTTGTGATGAAGGCGGAACAGGAGCGTCGTGCTGCGATCATCCGTGCTGAGGGAGAAAGTGATGCTGCAAAGCTGATTTCTGATGCTACTGCTGTTGCTGGTATGGGGTTGATTGAGCTTAGGAGGATTGAGGCTTCCAGGGAAATTGCCGCTACTTTGGCCAAGTCTCCTAATGTCTCTTACCTTCCTGGTGGAAAGAACATGCTCATGGCTCTTAATCCTTCACGTTGA
Protein sequence

>Msa0488880

MGSNQAANILSNLARVAFGLGAAATAVNSSLYTVDGGQRAVLFDRFRGILSESVGEGTHFLIPWVQKPYVFDIRTRPHTFSSISGTKDLQMVNLTLRVLSRPDTQRLPTIVQNLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTDRPQVSALVRDSLVRRAKDFNILLDDVAITHLSYGGEFSRAVEQKQVAQQEAERSKFVVMKAEQERRAAIIRAEGESDAAKLISDATAVAGMGLIELRRIEASREIAATLAKSPNVSYLPGGKNMLMALNPSR*