Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503430 | XP_013460002.1 | 92.651 | 381 | 28 | 0 | 1 | 381 | 1 | 381 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503430 | sp|Q9LYS9|B561H_ARATH | 42.618 | 359 | 197 | 7 | 26 | 379 | 37 | 391 | 1.87e-93 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503430 | A0A072UY52 | 92.651 | 381 | 28 | 0 | 1 | 381 | 1 | 381 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0165520 | Msa0503430 | 0.803993 | 2.673209e-49 | -8.615850e-47 |
| Msa0188460 | Msa0503430 | 0.817297 | 3.547805e-52 | -8.615850e-47 |
| Msa0194440 | Msa0503430 | 0.800951 | 1.132437e-48 | -8.615850e-47 |
| Msa0232850 | Msa0503430 | 0.808422 | 3.121506e-50 | -8.615850e-47 |
| Msa0371730 | Msa0503430 | 0.801062 | 1.074750e-48 | -8.615850e-47 |
| Msa0384890 | Msa0503430 | 0.812778 | 3.571989e-51 | -8.615850e-47 |
| Msa0461790 | Msa0503430 | 0.849173 | 3.832202e-60 | -8.615850e-47 |
| Msa0479340 | Msa0503430 | 0.819565 | 1.086181e-52 | -8.615850e-47 |
| Msa0270520 | Msa0503430 | 0.810779 | 9.725284e-51 | -8.615850e-47 |
| Msa0305190 | Msa0503430 | 0.803713 | 3.056982e-49 | -8.615850e-47 |
| Msa0503430 | Msa0694370 | 0.809810 | 1.573925e-50 | -8.615850e-47 |
| Msa0503430 | Msa0729800 | 0.818757 | 1.659161e-52 | -8.615850e-47 |
| Msa0503430 | Msa0808010 | 0.827337 | 1.654238e-54 | -8.615850e-47 |
| Msa0503430 | Msa0808020 | 0.819945 | 8.895705e-53 | -8.615850e-47 |
| Msa0503430 | Msa0846210 | 0.845555 | 3.775545e-59 | -8.615850e-47 |
| Msa0503430 | Msa0848960 | 0.823198 | 1.575842e-53 | -8.615850e-47 |
| Msa0503430 | Msa0899430 | 0.819915 | 9.038451e-53 | -8.615850e-47 |
| Msa0503430 | Msa0899450 | 0.818511 | 1.886627e-52 | -8.615850e-47 |
| Msa0503430 | Msa0952720 | 0.801530 | 8.621475e-49 | -8.615850e-47 |
| Msa0503430 | Msa0958550 | 0.826680 | 2.375584e-54 | -8.615850e-47 |
| Msa0503430 | Msa1023050 | 0.818844 | 1.585531e-52 | -8.615850e-47 |
| Msa0503430 | Msa1023950 | 0.808195 | 3.489704e-50 | -8.615850e-47 |
| Msa0503430 | Msa1050680 | 0.800918 | 1.150354e-48 | -8.615850e-47 |
| Msa0503430 | Msa1065570 | 0.802271 | 6.073214e-49 | -8.615850e-47 |
| Msa0503430 | Msa1092990 | 0.801490 | 8.785846e-49 | -8.615850e-47 |
| Msa0503430 | Msa1120610 | 0.800098 | 1.689850e-48 | -8.615850e-47 |
| Msa0503430 | Msa1195190 | 0.805531 | 1.276366e-49 | -8.615850e-47 |
| Msa0503430 | Msa1285930 | 0.803549 | 3.305942e-49 | -8.615850e-47 |
| Msa0503430 | Msa1320300 | 0.810478 | 1.130232e-50 | -8.615850e-47 |
| Msa0503430 | Msa1397580 | 0.802015 | 6.856080e-49 | -8.615850e-47 |
| Msa0503430 | Msa1444440 | 0.806960 | 6.383118e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503430 | MtrunA17_Chr3g0101961 | 92.651 | 381 | 28 | 0 | 1 | 381 | 1 | 381 | 0.0 | 712 |
| Msa0503430 | MtrunA17_Chr4g0076051 | 40.260 | 385 | 211 | 10 | 6 | 377 | 3 | 381 | 2.11e-81 | 254 |
| Msa0503430 | MtrunA17_Chr2g0290131 | 39.779 | 362 | 202 | 8 | 26 | 377 | 29 | 384 | 2.66e-76 | 241 |
| Msa0503430 | MtrunA17_Chr7g0234191 | 36.685 | 368 | 225 | 6 | 1 | 367 | 54 | 414 | 1.08e-74 | 238 |
| Msa0503430 | MtrunA17_Chr2g0278181 | 42.230 | 296 | 160 | 6 | 87 | 376 | 1 | 291 | 5.77e-64 | 206 |
| Msa0503430 | MtrunA17_Chr7g0261921 | 73.228 | 127 | 34 | 0 | 87 | 213 | 1 | 127 | 8.63e-62 | 195 |
| Msa0503430 | MtrunA17_Chr5g0447771 | 31.667 | 360 | 222 | 10 | 36 | 378 | 68 | 420 | 2.43e-50 | 174 |
| Msa0503430 | MtrunA17_Chr5g0444651 | 33.238 | 349 | 214 | 9 | 36 | 371 | 47 | 389 | 6.74e-50 | 173 |
| Msa0503430 | MtrunA17_Chr8g0347591 | 28.239 | 301 | 198 | 8 | 71 | 367 | 91 | 377 | 4.41e-27 | 110 |
| Msa0503430 | MtrunA17_Chr8g0338731 | 32.512 | 203 | 126 | 5 | 1 | 198 | 1 | 197 | 1.53e-26 | 106 |
| Msa0503430 | MtrunA17_Chr7g0275621 | 26.855 | 283 | 198 | 5 | 87 | 368 | 104 | 378 | 2.12e-20 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503430 | AT3G59070.1 | 42.618 | 359 | 197 | 7 | 26 | 379 | 37 | 391 | 1.90e-94 | 290 |
| Msa0503430 | AT5G47530.1 | 42.090 | 354 | 200 | 5 | 26 | 377 | 27 | 377 | 1.30e-93 | 286 |
| Msa0503430 | AT5G35735.1 | 42.297 | 357 | 190 | 9 | 26 | 377 | 29 | 374 | 5.07e-88 | 272 |
| Msa0503430 | AT4G17280.1 | 38.338 | 373 | 222 | 6 | 7 | 375 | 15 | 383 | 1.87e-84 | 263 |
| Msa0503430 | AT3G25290.1 | 39.164 | 383 | 216 | 10 | 7 | 379 | 13 | 388 | 3.14e-81 | 254 |
| Msa0503430 | AT3G25290.2 | 39.164 | 383 | 216 | 10 | 7 | 379 | 13 | 388 | 3.14e-81 | 254 |
| Msa0503430 | AT4G12980.1 | 40.390 | 359 | 201 | 8 | 30 | 378 | 33 | 388 | 1.52e-76 | 242 |
| Msa0503430 | AT5G48750.1 | 40.496 | 242 | 137 | 4 | 7 | 244 | 12 | 250 | 5.06e-59 | 192 |
| Msa0503430 | AT2G04850.1 | 30.789 | 380 | 237 | 9 | 19 | 379 | 16 | 388 | 2.98e-53 | 182 |
| Msa0503430 | AT3G07570.1 | 27.132 | 387 | 229 | 16 | 3 | 364 | 5 | 363 | 3.41e-25 | 105 |
| Msa0503430 | AT3G07390.1 | 36.250 | 160 | 94 | 5 | 34 | 186 | 54 | 212 | 8.67e-20 | 88.6 |
| Msa0503430 | AT3G61750.1 | 26.736 | 288 | 183 | 10 | 87 | 364 | 101 | 370 | 2.86e-18 | 86.3 |
| Msa0503430 | AT3G61750.2 | 25.828 | 302 | 195 | 11 | 73 | 364 | 11 | 293 | 3.59e-18 | 85.1 |
| Msa0503430 | AT3G07390.2 | 42.391 | 92 | 47 | 3 | 33 | 118 | 53 | 144 | 1.91e-13 | 68.2 |
Find 82 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCATTAGAATTAGGGTTTA+TGG | 0.112675 | 3_4:+46616120 | None:intergenic |
| CCTGCATAGTTAAGATTATT+TGG | 0.126619 | 3_4:+46616262 | None:intergenic |
| CCTATCATGCCATTAGAATT+AGG | 0.149551 | 3_4:+46616112 | None:intergenic |
| ATTATCTATGCTTGTGTAAT+TGG | 0.156616 | 3_4:-46614584 | Msa0503430:CDS |
| CTATACTTGTGATCTTTCTT+TGG | 0.217638 | 3_4:+46614716 | None:intergenic |
| CTTCCGGTTTATGATATTTC+GGG | 0.219832 | 3_4:-46615986 | Msa0503430:CDS |
| GGAGCAAATGTTCAAAGTTT+TGG | 0.225286 | 3_4:-46615833 | Msa0503430:CDS |
| TCTTCCGGTTTATGATATTT+CGG | 0.274364 | 3_4:-46615987 | Msa0503430:CDS |
| CTTCAAAGGCTTTGACATCT+TGG | 0.282677 | 3_4:-46614627 | Msa0503430:CDS |
| TTCAAAGGCTTTGACATCTT+GGG | 0.291829 | 3_4:-46614626 | Msa0503430:CDS |
| CCTAATTCTAATGGCATGAT+AGG | 0.296993 | 3_4:-46616112 | Msa0503430:CDS |
| AGTAAAGAACTTGGAGTATA+GGG | 0.304729 | 3_4:-46614494 | None:intergenic |
| CTATCATGCCATTAGAATTA+GGG | 0.310906 | 3_4:+46616113 | None:intergenic |
| GTGAGAAGGAAAAGAAGTTT+TGG | 0.317643 | 3_4:+46616343 | None:intergenic |
| GAGTAAAGAACTTGGAGTAT+AGG | 0.321962 | 3_4:-46614495 | None:intergenic |
| AATGCCAATTGGAGTAATAT+TGG | 0.333019 | 3_4:-46614957 | Msa0503430:CDS |
| CAACCATTATCTTAGCTATA+TGG | 0.338799 | 3_4:-46614655 | Msa0503430:CDS |
| TGCTTGTGTAATTGGATGTC+TGG | 0.362662 | 3_4:-46614576 | Msa0503430:CDS |
| AGAGAGTAACATTAGTCTTC+CGG | 0.368297 | 3_4:-46616002 | Msa0503430:CDS |
| AGGATTCTAGTTGGATTGCT+TGG | 0.376715 | 3_4:-46616144 | Msa0503430:CDS |
| CCAAATAATCTTAACTATGC+AGG | 0.379993 | 3_4:-46616262 | Msa0503430:CDS |
| CAATCTATAGCATTGTTATT+CGG | 0.381433 | 3_4:-46614869 | Msa0503430:CDS |
| AACATCTTTCATTTCTTAGT+TGG | 0.385981 | 3_4:-46614683 | Msa0503430:CDS |
| TGCGGAGTGTTGTGAATTCC+TGG | 0.390033 | 3_4:+46614806 | None:intergenic |
| AAGATCACAAGTATAGAATA+TGG | 0.394642 | 3_4:-46614709 | Msa0503430:CDS |
| TGCATGGTATTGAGGTTGTA+AGG | 0.405558 | 3_4:+46616299 | None:intergenic |
| GCCATAAACCCTAATTCTAA+TGG | 0.409224 | 3_4:-46616121 | Msa0503430:CDS |
| AATTGTGAATGTTATAAGTT+GGG | 0.413370 | 3_4:-46614987 | Msa0503430:CDS |
| ATCGGTCATCGAAACTTTGA+TGG | 0.413436 | 3_4:-46616076 | Msa0503430:CDS |
| CGAGCCAATATTACTCCAAT+TGG | 0.423561 | 3_4:+46614953 | None:intergenic |
| GGATTCTAGTTGGATTGCTT+GGG | 0.433982 | 3_4:-46616143 | Msa0503430:CDS |
| TTAATGTAAAGGATTCTAGT+TGG | 0.435523 | 3_4:-46616153 | Msa0503430:CDS |
| AAGAGATTTGAAGGACCAAC+AGG | 0.436784 | 3_4:-46614923 | Msa0503430:CDS |
| GTTCCATATAGCTAAGATAA+TGG | 0.440844 | 3_4:+46614652 | None:intergenic |
| TTGCTTGGATTATGTGGCTA+TGG | 0.448234 | 3_4:-46614526 | Msa0503430:CDS |
| TTTGCCACTGGTATATATAT+GGG | 0.456352 | 3_4:-46614836 | Msa0503430:CDS |
| GTTCAAGAAAATTAATGTAA+AGG | 0.458906 | 3_4:-46616164 | Msa0503430:CDS |
| TGATATTTCGGGAATGTACC+TGG | 0.459537 | 3_4:-46615975 | Msa0503430:CDS |
| TAAAGAGAGGAATCTAAAAC+AGG | 0.463990 | 3_4:+46616226 | None:intergenic |
| TGAGTTTAGAAGTTGTTGCT+TGG | 0.466873 | 3_4:-46614541 | Msa0503430:CDS |
| TCATGCATGGCAAGAAGGAT+TGG | 0.469395 | 3_4:-46615894 | Msa0503430:CDS |
| GAAGGATTGGTTTCTAGTGA+TGG | 0.477780 | 3_4:-46615881 | Msa0503430:CDS |
| TGGAATCACTCTAATGACTT+TGG | 0.479693 | 3_4:-46614774 | Msa0503430:CDS |
| TCAAAGGCTTTGACATCTTG+GGG | 0.482252 | 3_4:-46614625 | Msa0503430:CDS |
| ATTGACATCTCATGCTTTGA+CGG | 0.482458 | 3_4:-46615855 | Msa0503430:CDS |
| ATAGGATCACAAGCTCTAAT+CGG | 0.487311 | 3_4:-46616094 | Msa0503430:CDS |
| TAACAATGCTATAGATTGGC+AGG | 0.489519 | 3_4:+46614874 | None:intergenic |
| CGTCACTTGAAGAGATTTGA+AGG | 0.490148 | 3_4:-46614932 | Msa0503430:CDS |
| CGAATAACAATGCTATAGAT+TGG | 0.490397 | 3_4:+46614870 | None:intergenic |
| TGGGGAACACTAATGCCAAT+TGG | 0.491570 | 3_4:-46614968 | Msa0503430:CDS |
| GCATTGTTATTCGGCACTGC+TGG | 0.500170 | 3_4:-46614860 | Msa0503430:CDS |
| AAGTTGTTGCTTGGATTATG+TGG | 0.503907 | 3_4:-46614532 | Msa0503430:CDS |
| ATTCCCGAAATATCATAAAC+CGG | 0.504227 | 3_4:+46615983 | None:intergenic |
| ATTGTCTCTCAGAGTGTTGG+TGG | 0.512891 | 3_4:-46615785 | Msa0503430:CDS |
| TTGACATCTCATGCTTTGAC+GGG | 0.517147 | 3_4:-46615854 | Msa0503430:CDS |
| CAATTGTGAATGTTATAAGT+TGG | 0.527648 | 3_4:-46614988 | Msa0503430:CDS |
| GTTAATCATGCATGGCAAGA+AGG | 0.530329 | 3_4:-46615899 | Msa0503430:CDS |
| AACACTCCGCATAGATGCGT+TGG | 0.534965 | 3_4:-46614794 | Msa0503430:CDS |
| GTATGAGTTGCATGGTATTG+AGG | 0.545058 | 3_4:+46616291 | None:intergenic |
| ATATATATGGGAAACCATCC+AGG | 0.549675 | 3_4:-46614824 | Msa0503430:CDS |
| AACAAGAAGAGTAAAGAACT+TGG | 0.557520 | 3_4:-46614503 | Msa0503430:CDS |
| TCAGTTTGGTTAATCATGCA+TGG | 0.562684 | 3_4:-46615907 | Msa0503430:CDS |
| GCTATATGGAACGTCTTCAA+AGG | 0.568443 | 3_4:-46614641 | Msa0503430:CDS |
| ATATGATCATGCTTCCATCC+AGG | 0.570402 | 3_4:+46615957 | None:intergenic |
| GTTGATGAACGATGTGAAGA+GGG | 0.581978 | 3_4:+46616321 | None:intergenic |
| ATTTCGGGAATGTACCTGGA+TGG | 0.586159 | 3_4:-46615971 | Msa0503430:CDS |
| ACGATGTGAAGAGGGTGAGA+AGG | 0.586532 | 3_4:+46616329 | None:intergenic |
| AAAGGCTTTGACATCTTGGG+GGG | 0.588838 | 3_4:-46614623 | Msa0503430:CDS |
| CAAAGGCTTTGACATCTTGG+GGG | 0.589311 | 3_4:-46614624 | Msa0503430:CDS |
| GAAGCATGATCATATTTGCA+AGG | 0.592720 | 3_4:-46615949 | Msa0503430:CDS |
| TGAAACCATGTTGATCCTGT+TGG | 0.599661 | 3_4:+46614908 | None:intergenic |
| GAGTGTTGTGAATTCCTGGA+TGG | 0.600465 | 3_4:+46614810 | None:intergenic |
| ATTGTAGTTCCAATAAAGAG+AGG | 0.615258 | 3_4:+46616213 | None:intergenic |
| GAGAGGAATCTAAAACAGGT+AGG | 0.626344 | 3_4:+46616230 | None:intergenic |
| AATATTGTCTCTCAGAGTGT+TGG | 0.630955 | 3_4:-46615788 | Msa0503430:CDS |
| GGTTGATGAACGATGTGAAG+AGG | 0.639101 | 3_4:+46616320 | None:intergenic |
| ATCACAAGTATAGAATATGG+TGG | 0.645971 | 3_4:-46614706 | Msa0503430:CDS |
| GGAAAAGTGTATGAGTTGCA+TGG | 0.649424 | 3_4:+46616283 | None:intergenic |
| ATTGTGAATGTTATAAGTTG+GGG | 0.668558 | 3_4:-46614986 | Msa0503430:CDS |
| GTTTCCCATATATATACCAG+TGG | 0.675594 | 3_4:+46614832 | None:intergenic |
| AAGGACCAACAGGATCAACA+TGG | 0.677930 | 3_4:-46614913 | Msa0503430:CDS |
| GTGATTCCAACGCATCTATG+CGG | 0.715691 | 3_4:+46614788 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAGTAAATATGAAAA+GGG | + | chr3_4:46615173-46615192 | None:intergenic | 10.0% |
| !! | ATTTATAAGTAAATATGAAA+AGG | + | chr3_4:46615174-46615193 | None:intergenic | 10.0% |
| !! | TTTATAAGTAAATATGAAAA+GGG | + | chr3_4:46615173-46615192 | None:intergenic | 10.0% |
| !! | ATTTATAAGTAAATATGAAA+AGG | + | chr3_4:46615174-46615193 | None:intergenic | 10.0% |
| !!! | TTGTTTTGTTTTGTTTTAAA+AGG | - | chr3_4:46615229-46615248 | Msa0503430:intron | 15.0% |
| !!! | TGTTTTGTTTTGTTTTAAAA+GGG | - | chr3_4:46615230-46615249 | Msa0503430:intron | 15.0% |
| !!! | TTGTTTTGTTTTGTTTTAAA+AGG | - | chr3_4:46615229-46615248 | Msa0503430:intron | 15.0% |
| !!! | TGTTTTGTTTTGTTTTAAAA+GGG | - | chr3_4:46615230-46615249 | Msa0503430:intron | 15.0% |
| !! | GTTCAAGAAAATTAATGTAA+AGG | - | chr3_4:46614687-46614706 | Msa0503430:CDS | 20.0% |
| !!! | TGAGTTTTTTTTAATGGTTT+TGG | - | chr3_4:46615336-46615355 | Msa0503430:intron | 20.0% |
| !!! | TTTTTTTAATGGTTTTGGAT+AGG | - | chr3_4:46615341-46615360 | Msa0503430:intron | 20.0% |
| !! | TAATTTCATACAAATCAGTT+TGG | - | chr3_4:46615451-46615470 | Msa0503430:intron | 20.0% |
| !! | AAAACTGCTCAAAATAATAA+CGG | - | chr3_4:46615648-46615667 | Msa0503430:intron | 20.0% |
| !! | AATTGTGAATGTTATAAGTT+GGG | - | chr3_4:46615864-46615883 | Msa0503430:CDS | 20.0% |
| !! | GTTCAAGAAAATTAATGTAA+AGG | - | chr3_4:46614687-46614706 | Msa0503430:CDS | 20.0% |
| !!! | TGAGTTTTTTTTAATGGTTT+TGG | - | chr3_4:46615336-46615355 | Msa0503430:intron | 20.0% |
| !!! | TTTTTTTAATGGTTTTGGAT+AGG | - | chr3_4:46615341-46615360 | Msa0503430:intron | 20.0% |
| !! | TAATTTCATACAAATCAGTT+TGG | - | chr3_4:46615451-46615470 | Msa0503430:intron | 20.0% |
| !! | AAAACTGCTCAAAATAATAA+CGG | - | chr3_4:46615648-46615667 | Msa0503430:intron | 20.0% |
| !! | AATTGTGAATGTTATAAGTT+GGG | - | chr3_4:46615864-46615883 | Msa0503430:CDS | 20.0% |
| !! | TTTTAGATTCCTCTCTTTAT+TGG | - | chr3_4:46614629-46614648 | Msa0503430:CDS | 25.0% |
| ! | TTAATGTAAAGGATTCTAGT+TGG | - | chr3_4:46614698-46614717 | Msa0503430:CDS | 25.0% |
| !! | TTAACCAAACTGACATTTTT+AGG | + | chr3_4:46614937-46614956 | None:intergenic | 25.0% |
| !!! | TTTGTTTTGTTTTAAAAGGG+AGG | - | chr3_4:46615233-46615252 | Msa0503430:intron | 25.0% |
| ! | CCATTAAAAAAAACTCATCT+AGG | + | chr3_4:46615333-46615352 | None:intergenic | 25.0% |
| !!! | CCTAGATGAGTTTTTTTTAA+TGG | - | chr3_4:46615330-46615349 | Msa0503430:intron | 25.0% |
| ! | CAATTGTGAATGTTATAAGT+TGG | - | chr3_4:46615863-46615882 | Msa0503430:CDS | 25.0% |
| ! | ATTGTGAATGTTATAAGTTG+GGG | - | chr3_4:46615865-46615884 | Msa0503430:CDS | 25.0% |
| !! | CAATCTATAGCATTGTTATT+CGG | - | chr3_4:46615982-46616001 | Msa0503430:CDS | 25.0% |
| ! | AAGATCACAAGTATAGAATA+TGG | - | chr3_4:46616142-46616161 | Msa0503430:CDS | 25.0% |
| ! | AACATCTTTCATTTCTTAGT+TGG | - | chr3_4:46616168-46616187 | Msa0503430:CDS | 25.0% |
| ! | ATTATCTATGCTTGTGTAAT+TGG | - | chr3_4:46616267-46616286 | Msa0503430:CDS | 25.0% |
| !! | TTTTAGATTCCTCTCTTTAT+TGG | - | chr3_4:46614629-46614648 | Msa0503430:CDS | 25.0% |
| ! | TTAATGTAAAGGATTCTAGT+TGG | - | chr3_4:46614698-46614717 | Msa0503430:CDS | 25.0% |
| !! | TTAACCAAACTGACATTTTT+AGG | + | chr3_4:46614937-46614956 | None:intergenic | 25.0% |
| !!! | TTTGTTTTGTTTTAAAAGGG+AGG | - | chr3_4:46615233-46615252 | Msa0503430:intron | 25.0% |
| ! | CCATTAAAAAAAACTCATCT+AGG | + | chr3_4:46615333-46615352 | None:intergenic | 25.0% |
| !!! | CCTAGATGAGTTTTTTTTAA+TGG | - | chr3_4:46615330-46615349 | Msa0503430:intron | 25.0% |
| ! | CAATTGTGAATGTTATAAGT+TGG | - | chr3_4:46615863-46615882 | Msa0503430:CDS | 25.0% |
| ! | ATTGTGAATGTTATAAGTTG+GGG | - | chr3_4:46615865-46615884 | Msa0503430:CDS | 25.0% |
| !! | CAATCTATAGCATTGTTATT+CGG | - | chr3_4:46615982-46616001 | Msa0503430:CDS | 25.0% |
| ! | AAGATCACAAGTATAGAATA+TGG | - | chr3_4:46616142-46616161 | Msa0503430:CDS | 25.0% |
| ! | AACATCTTTCATTTCTTAGT+TGG | - | chr3_4:46616168-46616187 | Msa0503430:CDS | 25.0% |
| ! | ATTATCTATGCTTGTGTAAT+TGG | - | chr3_4:46616267-46616286 | Msa0503430:CDS | 25.0% |
| CCTGCATAGTTAAGATTATT+TGG | + | chr3_4:46614592-46614611 | None:intergenic | 30.0% | |
| CCAAATAATCTTAACTATGC+AGG | - | chr3_4:46614589-46614608 | Msa0503430:CDS | 30.0% | |
| ! | TAAAGAGAGGAATCTAAAAC+AGG | + | chr3_4:46614628-46614647 | None:intergenic | 30.0% |
| ATTGTAGTTCCAATAAAGAG+AGG | + | chr3_4:46614641-46614660 | None:intergenic | 30.0% | |
| !!! | ACATCGATAACACTAGTTTT+TGG | + | chr3_4:46614664-46614683 | None:intergenic | 30.0% |
| CTATCATGCCATTAGAATTA+GGG | + | chr3_4:46614741-46614760 | None:intergenic | 30.0% | |
| TCTTCCGGTTTATGATATTT+CGG | - | chr3_4:46614864-46614883 | Msa0503430:CDS | 30.0% | |
| ATTCCCGAAATATCATAAAC+CGG | + | chr3_4:46614871-46614890 | None:intergenic | 30.0% | |
| ACTTCCTAAAAATGTCAGTT+TGG | - | chr3_4:46614930-46614949 | Msa0503430:CDS | 30.0% | |
| !!! | TGTTCAAAGTTTTGGAACTT+TGG | - | chr3_4:46615026-46615045 | Msa0503430:intron | 30.0% |
| ! | GGAACTTTGGATTTTCAATA+TGG | - | chr3_4:46615039-46615058 | Msa0503430:intron | 30.0% |
| !!! | GGCAGTTTGTTTTATTACAA+AGG | - | chr3_4:46615362-46615381 | Msa0503430:intron | 30.0% |
| TCATACAAATCAGTTTGGAA+CGG | - | chr3_4:46615456-46615475 | Msa0503430:intron | 30.0% | |
| !!! | CAGTATGAGCAAATCTTTTT+TGG | + | chr3_4:46615617-46615636 | None:intergenic | 30.0% |
| AATGCCAATTGGAGTAATAT+TGG | - | chr3_4:46615894-46615913 | Msa0503430:CDS | 30.0% | |
| CGAATAACAATGCTATAGAT+TGG | + | chr3_4:46615984-46616003 | None:intergenic | 30.0% | |
| ! | TTTTGCCACTGGTATATATA+TGG | - | chr3_4:46616014-46616033 | Msa0503430:CDS | 30.0% |
| TTTGCCACTGGTATATATAT+GGG | - | chr3_4:46616015-46616034 | Msa0503430:CDS | 30.0% | |
| !!! | TTTGTGTTGCCATTTTTCTT+AGG | - | chr3_4:46616112-46616131 | Msa0503430:CDS | 30.0% |
| TTTCTTTGGCCTAAGAAAAA+TGG | + | chr3_4:46616124-46616143 | None:intergenic | 30.0% | |
| CTATACTTGTGATCTTTCTT+TGG | + | chr3_4:46616138-46616157 | None:intergenic | 30.0% | |
| ATCACAAGTATAGAATATGG+TGG | - | chr3_4:46616145-46616164 | Msa0503430:CDS | 30.0% | |
| CAACCATTATCTTAGCTATA+TGG | - | chr3_4:46616196-46616215 | Msa0503430:CDS | 30.0% | |
| GTTCCATATAGCTAAGATAA+TGG | + | chr3_4:46616202-46616221 | None:intergenic | 30.0% | |
| !!! | ATTGGATGTCTGGTTTTAAT+TGG | - | chr3_4:46616285-46616304 | Msa0503430:CDS | 30.0% |
| AACAAGAAGAGTAAAGAACT+TGG | - | chr3_4:46616348-46616367 | Msa0503430:CDS | 30.0% | |
| CCTGCATAGTTAAGATTATT+TGG | + | chr3_4:46614592-46614611 | None:intergenic | 30.0% | |
| CCAAATAATCTTAACTATGC+AGG | - | chr3_4:46614589-46614608 | Msa0503430:CDS | 30.0% | |
| ! | TAAAGAGAGGAATCTAAAAC+AGG | + | chr3_4:46614628-46614647 | None:intergenic | 30.0% |
| ATTGTAGTTCCAATAAAGAG+AGG | + | chr3_4:46614641-46614660 | None:intergenic | 30.0% | |
| !!! | ACATCGATAACACTAGTTTT+TGG | + | chr3_4:46614664-46614683 | None:intergenic | 30.0% |
| CTATCATGCCATTAGAATTA+GGG | + | chr3_4:46614741-46614760 | None:intergenic | 30.0% | |
| TCTTCCGGTTTATGATATTT+CGG | - | chr3_4:46614864-46614883 | Msa0503430:CDS | 30.0% | |
| ATTCCCGAAATATCATAAAC+CGG | + | chr3_4:46614871-46614890 | None:intergenic | 30.0% | |
| ACTTCCTAAAAATGTCAGTT+TGG | - | chr3_4:46614930-46614949 | Msa0503430:CDS | 30.0% | |
| !!! | TGTTCAAAGTTTTGGAACTT+TGG | - | chr3_4:46615026-46615045 | Msa0503430:intron | 30.0% |
| ! | GGAACTTTGGATTTTCAATA+TGG | - | chr3_4:46615039-46615058 | Msa0503430:intron | 30.0% |
| !!! | GGCAGTTTGTTTTATTACAA+AGG | - | chr3_4:46615362-46615381 | Msa0503430:intron | 30.0% |
| TCATACAAATCAGTTTGGAA+CGG | - | chr3_4:46615456-46615475 | Msa0503430:intron | 30.0% | |
| !!! | CAGTATGAGCAAATCTTTTT+TGG | + | chr3_4:46615617-46615636 | None:intergenic | 30.0% |
| AATGCCAATTGGAGTAATAT+TGG | - | chr3_4:46615894-46615913 | Msa0503430:CDS | 30.0% | |
| CGAATAACAATGCTATAGAT+TGG | + | chr3_4:46615984-46616003 | None:intergenic | 30.0% | |
| ! | TTTTGCCACTGGTATATATA+TGG | - | chr3_4:46616014-46616033 | Msa0503430:CDS | 30.0% |
| TTTGCCACTGGTATATATAT+GGG | - | chr3_4:46616015-46616034 | Msa0503430:CDS | 30.0% | |
| !!! | TTTGTGTTGCCATTTTTCTT+AGG | - | chr3_4:46616112-46616131 | Msa0503430:CDS | 30.0% |
| TTTCTTTGGCCTAAGAAAAA+TGG | + | chr3_4:46616124-46616143 | None:intergenic | 30.0% | |
| CTATACTTGTGATCTTTCTT+TGG | + | chr3_4:46616138-46616157 | None:intergenic | 30.0% | |
| ATCACAAGTATAGAATATGG+TGG | - | chr3_4:46616145-46616164 | Msa0503430:CDS | 30.0% | |
| CAACCATTATCTTAGCTATA+TGG | - | chr3_4:46616196-46616215 | Msa0503430:CDS | 30.0% | |
| GTTCCATATAGCTAAGATAA+TGG | + | chr3_4:46616202-46616221 | None:intergenic | 30.0% | |
| !!! | ATTGGATGTCTGGTTTTAAT+TGG | - | chr3_4:46616285-46616304 | Msa0503430:CDS | 30.0% |
| AACAAGAAGAGTAAAGAACT+TGG | - | chr3_4:46616348-46616367 | Msa0503430:CDS | 30.0% | |
| ! | GTGAGAAGGAAAAGAAGTTT+TGG | + | chr3_4:46614511-46614530 | None:intergenic | 35.0% |
| GCCATAAACCCTAATTCTAA+TGG | - | chr3_4:46614730-46614749 | Msa0503430:CDS | 35.0% | |
| GCCATTAGAATTAGGGTTTA+TGG | + | chr3_4:46614734-46614753 | None:intergenic | 35.0% | |
| CCTATCATGCCATTAGAATT+AGG | + | chr3_4:46614742-46614761 | None:intergenic | 35.0% | |
| CCTAATTCTAATGGCATGAT+AGG | - | chr3_4:46614739-46614758 | Msa0503430:CDS | 35.0% | |
| ! | ATAGGATCACAAGCTCTAAT+CGG | - | chr3_4:46614757-46614776 | Msa0503430:CDS | 35.0% |
| !! | AGAGAGTAACATTAGTCTTC+CGG | - | chr3_4:46614849-46614868 | Msa0503430:CDS | 35.0% |
| CTTCCGGTTTATGATATTTC+GGG | - | chr3_4:46614865-46614884 | Msa0503430:CDS | 35.0% | |
| GAAGCATGATCATATTTGCA+AGG | - | chr3_4:46614902-46614921 | Msa0503430:CDS | 35.0% | |
| TCAGTTTGGTTAATCATGCA+TGG | - | chr3_4:46614944-46614963 | Msa0503430:CDS | 35.0% | |
| ATTGACATCTCATGCTTTGA+CGG | - | chr3_4:46614996-46615015 | Msa0503430:CDS | 35.0% | |
| ! | GGAGCAAATGTTCAAAGTTT+TGG | - | chr3_4:46615018-46615037 | Msa0503430:intron | 35.0% |
| AATATTGTCTCTCAGAGTGT+TGG | - | chr3_4:46615063-46615082 | Msa0503430:intron | 35.0% | |
| !! | AAATCAGTTTGGAACGGTTT+TGG | - | chr3_4:46615462-46615481 | Msa0503430:intron | 35.0% |
| TTAACATTCCGTCTCTCTAA+AGG | - | chr3_4:46615834-46615853 | Msa0503430:CDS | 35.0% | |
| TAACAATGCTATAGATTGGC+AGG | + | chr3_4:46615980-46615999 | None:intergenic | 35.0% | |
| GTTTCCCATATATATACCAG+TGG | + | chr3_4:46616022-46616041 | None:intergenic | 35.0% | |
| ATATATATGGGAAACCATCC+AGG | - | chr3_4:46616027-46616046 | Msa0503430:CDS | 35.0% | |
| TGGAATCACTCTAATGACTT+TGG | - | chr3_4:46616077-46616096 | Msa0503430:CDS | 35.0% | |
| ! | TTCAAAGGCTTTGACATCTT+GGG | - | chr3_4:46616225-46616244 | Msa0503430:CDS | 35.0% |
| TGAGTTTAGAAGTTGTTGCT+TGG | - | chr3_4:46616310-46616329 | Msa0503430:CDS | 35.0% | |
| ! | AAGTTGTTGCTTGGATTATG+TGG | - | chr3_4:46616319-46616338 | Msa0503430:CDS | 35.0% |
| ! | GTGAGAAGGAAAAGAAGTTT+TGG | + | chr3_4:46614511-46614530 | None:intergenic | 35.0% |
| GCCATAAACCCTAATTCTAA+TGG | - | chr3_4:46614730-46614749 | Msa0503430:CDS | 35.0% | |
| GCCATTAGAATTAGGGTTTA+TGG | + | chr3_4:46614734-46614753 | None:intergenic | 35.0% | |
| CCTATCATGCCATTAGAATT+AGG | + | chr3_4:46614742-46614761 | None:intergenic | 35.0% | |
| CCTAATTCTAATGGCATGAT+AGG | - | chr3_4:46614739-46614758 | Msa0503430:CDS | 35.0% | |
| ! | ATAGGATCACAAGCTCTAAT+CGG | - | chr3_4:46614757-46614776 | Msa0503430:CDS | 35.0% |
| !! | AGAGAGTAACATTAGTCTTC+CGG | - | chr3_4:46614849-46614868 | Msa0503430:CDS | 35.0% |
| CTTCCGGTTTATGATATTTC+GGG | - | chr3_4:46614865-46614884 | Msa0503430:CDS | 35.0% | |
| GAAGCATGATCATATTTGCA+AGG | - | chr3_4:46614902-46614921 | Msa0503430:CDS | 35.0% | |
| TCAGTTTGGTTAATCATGCA+TGG | - | chr3_4:46614944-46614963 | Msa0503430:CDS | 35.0% | |
| ATTGACATCTCATGCTTTGA+CGG | - | chr3_4:46614996-46615015 | Msa0503430:CDS | 35.0% | |
| ! | GGAGCAAATGTTCAAAGTTT+TGG | - | chr3_4:46615018-46615037 | Msa0503430:intron | 35.0% |
| AATATTGTCTCTCAGAGTGT+TGG | - | chr3_4:46615063-46615082 | Msa0503430:intron | 35.0% | |
| !! | AAATCAGTTTGGAACGGTTT+TGG | - | chr3_4:46615462-46615481 | Msa0503430:intron | 35.0% |
| TTAACATTCCGTCTCTCTAA+AGG | - | chr3_4:46615834-46615853 | Msa0503430:CDS | 35.0% | |
| TAACAATGCTATAGATTGGC+AGG | + | chr3_4:46615980-46615999 | None:intergenic | 35.0% | |
| GTTTCCCATATATATACCAG+TGG | + | chr3_4:46616022-46616041 | None:intergenic | 35.0% | |
| ATATATATGGGAAACCATCC+AGG | - | chr3_4:46616027-46616046 | Msa0503430:CDS | 35.0% | |
| TGGAATCACTCTAATGACTT+TGG | - | chr3_4:46616077-46616096 | Msa0503430:CDS | 35.0% | |
| ! | TTCAAAGGCTTTGACATCTT+GGG | - | chr3_4:46616225-46616244 | Msa0503430:CDS | 35.0% |
| TGAGTTTAGAAGTTGTTGCT+TGG | - | chr3_4:46616310-46616329 | Msa0503430:CDS | 35.0% | |
| ! | AAGTTGTTGCTTGGATTATG+TGG | - | chr3_4:46616319-46616338 | Msa0503430:CDS | 35.0% |
| ! | GTTGATGAACGATGTGAAGA+GGG | + | chr3_4:46614533-46614552 | None:intergenic | 40.0% |
| ! | TGCATGGTATTGAGGTTGTA+AGG | + | chr3_4:46614555-46614574 | None:intergenic | 40.0% |
| GTATGAGTTGCATGGTATTG+AGG | + | chr3_4:46614563-46614582 | None:intergenic | 40.0% | |
| ! | GGAAAAGTGTATGAGTTGCA+TGG | + | chr3_4:46614571-46614590 | None:intergenic | 40.0% |
| ! | GAGAGGAATCTAAAACAGGT+AGG | + | chr3_4:46614624-46614643 | None:intergenic | 40.0% |
| ! | AGGATTCTAGTTGGATTGCT+TGG | - | chr3_4:46614707-46614726 | Msa0503430:CDS | 40.0% |
| ! | GGATTCTAGTTGGATTGCTT+GGG | - | chr3_4:46614708-46614727 | Msa0503430:CDS | 40.0% |
| ATCGGTCATCGAAACTTTGA+TGG | - | chr3_4:46614775-46614794 | Msa0503430:CDS | 40.0% | |
| TGATATTTCGGGAATGTACC+TGG | - | chr3_4:46614876-46614895 | Msa0503430:CDS | 40.0% | |
| ATATGATCATGCTTCCATCC+AGG | + | chr3_4:46614897-46614916 | None:intergenic | 40.0% | |
| GTTAATCATGCATGGCAAGA+AGG | - | chr3_4:46614952-46614971 | Msa0503430:CDS | 40.0% | |
| !! | GAAGGATTGGTTTCTAGTGA+TGG | - | chr3_4:46614970-46614989 | Msa0503430:CDS | 40.0% |
| TTGACATCTCATGCTTTGAC+GGG | - | chr3_4:46614997-46615016 | Msa0503430:CDS | 40.0% | |
| GTCAAACCAATGCGTTGAAT+TGG | - | chr3_4:46615195-46615214 | Msa0503430:intron | 40.0% | |
| CAACATCCAATTCAACGCAT+TGG | + | chr3_4:46615204-46615223 | None:intergenic | 40.0% | |
| ! | TGCATGTACCTTTAGAGAGA+CGG | + | chr3_4:46615845-46615864 | None:intergenic | 40.0% |
| CGAGCCAATATTACTCCAAT+TGG | + | chr3_4:46615901-46615920 | None:intergenic | 40.0% | |
| CGTCACTTGAAGAGATTTGA+AGG | - | chr3_4:46615919-46615938 | Msa0503430:CDS | 40.0% | |
| AAGAGATTTGAAGGACCAAC+AGG | - | chr3_4:46615928-46615947 | Msa0503430:CDS | 40.0% | |
| TGAAACCATGTTGATCCTGT+TGG | + | chr3_4:46615946-46615965 | None:intergenic | 40.0% | |
| GCTATATGGAACGTCTTCAA+AGG | - | chr3_4:46616210-46616229 | Msa0503430:CDS | 40.0% | |
| ! | CTTCAAAGGCTTTGACATCT+TGG | - | chr3_4:46616224-46616243 | Msa0503430:CDS | 40.0% |
| ! | TCAAAGGCTTTGACATCTTG+GGG | - | chr3_4:46616226-46616245 | Msa0503430:CDS | 40.0% |
| TGCTTGTGTAATTGGATGTC+TGG | - | chr3_4:46616275-46616294 | Msa0503430:CDS | 40.0% | |
| TTGCTTGGATTATGTGGCTA+TGG | - | chr3_4:46616325-46616344 | Msa0503430:CDS | 40.0% | |
| ! | GTTGATGAACGATGTGAAGA+GGG | + | chr3_4:46614533-46614552 | None:intergenic | 40.0% |
| ! | TGCATGGTATTGAGGTTGTA+AGG | + | chr3_4:46614555-46614574 | None:intergenic | 40.0% |
| GTATGAGTTGCATGGTATTG+AGG | + | chr3_4:46614563-46614582 | None:intergenic | 40.0% | |
| ! | GGAAAAGTGTATGAGTTGCA+TGG | + | chr3_4:46614571-46614590 | None:intergenic | 40.0% |
| ! | GAGAGGAATCTAAAACAGGT+AGG | + | chr3_4:46614624-46614643 | None:intergenic | 40.0% |
| ! | AGGATTCTAGTTGGATTGCT+TGG | - | chr3_4:46614707-46614726 | Msa0503430:CDS | 40.0% |
| ! | GGATTCTAGTTGGATTGCTT+GGG | - | chr3_4:46614708-46614727 | Msa0503430:CDS | 40.0% |
| ATCGGTCATCGAAACTTTGA+TGG | - | chr3_4:46614775-46614794 | Msa0503430:CDS | 40.0% | |
| TGATATTTCGGGAATGTACC+TGG | - | chr3_4:46614876-46614895 | Msa0503430:CDS | 40.0% | |
| ATATGATCATGCTTCCATCC+AGG | + | chr3_4:46614897-46614916 | None:intergenic | 40.0% | |
| GTTAATCATGCATGGCAAGA+AGG | - | chr3_4:46614952-46614971 | Msa0503430:CDS | 40.0% | |
| !! | GAAGGATTGGTTTCTAGTGA+TGG | - | chr3_4:46614970-46614989 | Msa0503430:CDS | 40.0% |
| TTGACATCTCATGCTTTGAC+GGG | - | chr3_4:46614997-46615016 | Msa0503430:CDS | 40.0% | |
| GTCAAACCAATGCGTTGAAT+TGG | - | chr3_4:46615195-46615214 | Msa0503430:intron | 40.0% | |
| CAACATCCAATTCAACGCAT+TGG | + | chr3_4:46615204-46615223 | None:intergenic | 40.0% | |
| ! | TGCATGTACCTTTAGAGAGA+CGG | + | chr3_4:46615845-46615864 | None:intergenic | 40.0% |
| CGAGCCAATATTACTCCAAT+TGG | + | chr3_4:46615901-46615920 | None:intergenic | 40.0% | |
| CGTCACTTGAAGAGATTTGA+AGG | - | chr3_4:46615919-46615938 | Msa0503430:CDS | 40.0% | |
| AAGAGATTTGAAGGACCAAC+AGG | - | chr3_4:46615928-46615947 | Msa0503430:CDS | 40.0% | |
| TGAAACCATGTTGATCCTGT+TGG | + | chr3_4:46615946-46615965 | None:intergenic | 40.0% | |
| GCTATATGGAACGTCTTCAA+AGG | - | chr3_4:46616210-46616229 | Msa0503430:CDS | 40.0% | |
| ! | CTTCAAAGGCTTTGACATCT+TGG | - | chr3_4:46616224-46616243 | Msa0503430:CDS | 40.0% |
| ! | TCAAAGGCTTTGACATCTTG+GGG | - | chr3_4:46616226-46616245 | Msa0503430:CDS | 40.0% |
| TGCTTGTGTAATTGGATGTC+TGG | - | chr3_4:46616275-46616294 | Msa0503430:CDS | 40.0% | |
| TTGCTTGGATTATGTGGCTA+TGG | - | chr3_4:46616325-46616344 | Msa0503430:CDS | 40.0% | |
| !! | GGTTGATGAACGATGTGAAG+AGG | + | chr3_4:46614534-46614553 | None:intergenic | 45.0% |
| ATTTCGGGAATGTACCTGGA+TGG | - | chr3_4:46614880-46614899 | Msa0503430:CDS | 45.0% | |
| TCATGCATGGCAAGAAGGAT+TGG | - | chr3_4:46614957-46614976 | Msa0503430:CDS | 45.0% | |
| !! | ATTGTCTCTCAGAGTGTTGG+TGG | - | chr3_4:46615066-46615085 | Msa0503430:intron | 45.0% |
| TGGGGAACACTAATGCCAAT+TGG | - | chr3_4:46615883-46615902 | Msa0503430:CDS | 45.0% | |
| AAGGACCAACAGGATCAACA+TGG | - | chr3_4:46615938-46615957 | Msa0503430:CDS | 45.0% | |
| ! | GAGTGTTGTGAATTCCTGGA+TGG | + | chr3_4:46616044-46616063 | None:intergenic | 45.0% |
| GTGATTCCAACGCATCTATG+CGG | + | chr3_4:46616066-46616085 | None:intergenic | 45.0% | |
| ! | CAAAGGCTTTGACATCTTGG+GGG | - | chr3_4:46616227-46616246 | Msa0503430:CDS | 45.0% |
| ! | AAAGGCTTTGACATCTTGGG+GGG | - | chr3_4:46616228-46616247 | Msa0503430:CDS | 45.0% |
| !! | GGTTGATGAACGATGTGAAG+AGG | + | chr3_4:46614534-46614553 | None:intergenic | 45.0% |
| ATTTCGGGAATGTACCTGGA+TGG | - | chr3_4:46614880-46614899 | Msa0503430:CDS | 45.0% | |
| TCATGCATGGCAAGAAGGAT+TGG | - | chr3_4:46614957-46614976 | Msa0503430:CDS | 45.0% | |
| !! | ATTGTCTCTCAGAGTGTTGG+TGG | - | chr3_4:46615066-46615085 | Msa0503430:intron | 45.0% |
| TGGGGAACACTAATGCCAAT+TGG | - | chr3_4:46615883-46615902 | Msa0503430:CDS | 45.0% | |
| AAGGACCAACAGGATCAACA+TGG | - | chr3_4:46615938-46615957 | Msa0503430:CDS | 45.0% | |
| ! | GAGTGTTGTGAATTCCTGGA+TGG | + | chr3_4:46616044-46616063 | None:intergenic | 45.0% |
| GTGATTCCAACGCATCTATG+CGG | + | chr3_4:46616066-46616085 | None:intergenic | 45.0% | |
| ! | CAAAGGCTTTGACATCTTGG+GGG | - | chr3_4:46616227-46616246 | Msa0503430:CDS | 45.0% |
| ! | AAAGGCTTTGACATCTTGGG+GGG | - | chr3_4:46616228-46616247 | Msa0503430:CDS | 45.0% |
| !! | AAAATAAATAAAAAACAAAT+AGG | + | chr3_4:46615134-46615153 | None:intergenic | 5.0% |
| !!! | ATTTTATATTTGAATTTTTT+TGG | - | chr3_4:46615501-46615520 | Msa0503430:intron | 5.0% |
| !!! | TTTTATATTTGAATTTTTTT+GGG | - | chr3_4:46615502-46615521 | Msa0503430:intron | 5.0% |
| !! | AAATAAATAAATAAAAATGT+TGG | + | chr3_4:46615761-46615780 | None:intergenic | 5.0% |
| !! | AAAATAAATAAAAAACAAAT+AGG | + | chr3_4:46615134-46615153 | None:intergenic | 5.0% |
| !!! | ATTTTATATTTGAATTTTTT+TGG | - | chr3_4:46615501-46615520 | Msa0503430:intron | 5.0% |
| !!! | TTTTATATTTGAATTTTTTT+GGG | - | chr3_4:46615502-46615521 | Msa0503430:intron | 5.0% |
| !! | AAATAAATAAATAAAAATGT+TGG | + | chr3_4:46615761-46615780 | None:intergenic | 5.0% |
| ACGATGTGAAGAGGGTGAGA+AGG | + | chr3_4:46614525-46614544 | None:intergenic | 50.0% | |
| ! | GCATTGTTATTCGGCACTGC+TGG | - | chr3_4:46615991-46616010 | Msa0503430:CDS | 50.0% |
| !! | TGCGGAGTGTTGTGAATTCC+TGG | + | chr3_4:46616048-46616067 | None:intergenic | 50.0% |
| AACACTCCGCATAGATGCGT+TGG | - | chr3_4:46616057-46616076 | Msa0503430:CDS | 50.0% | |
| ACGATGTGAAGAGGGTGAGA+AGG | + | chr3_4:46614525-46614544 | None:intergenic | 50.0% | |
| ! | GCATTGTTATTCGGCACTGC+TGG | - | chr3_4:46615991-46616010 | Msa0503430:CDS | 50.0% |
| !! | TGCGGAGTGTTGTGAATTCC+TGG | + | chr3_4:46616048-46616067 | None:intergenic | 50.0% |
| AACACTCCGCATAGATGCGT+TGG | - | chr3_4:46616057-46616076 | Msa0503430:CDS | 50.0% | |
| !!! | GGCACTGCTGGTTTTGCCAC+TGG | - | chr3_4:46616003-46616022 | Msa0503430:CDS | 60.0% |
| !!! | GGCACTGCTGGTTTTGCCAC+TGG | - | chr3_4:46616003-46616022 | Msa0503430:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 46614496 | 46616377 | 46614496 | ID=Msa0503430;Name=Msa0503430 |
| chr3_4 | mRNA | 46614496 | 46616377 | 46614496 | ID=Msa0503430-mRNA-1;Parent=Msa0503430;Name=Msa0503430-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|2|0|381 |
| chr3_4 | exon | 46615754 | 46616377 | 46615754 | ID=Msa0503430-mRNA-1:exon:9967;Parent=Msa0503430-mRNA-1 |
| chr3_4 | exon | 46614496 | 46615017 | 46614496 | ID=Msa0503430-mRNA-1:exon:9966;Parent=Msa0503430-mRNA-1 |
| chr3_4 | CDS | 46615754 | 46616377 | 46615754 | ID=Msa0503430-mRNA-1:cds;Parent=Msa0503430-mRNA-1 |
| chr3_4 | CDS | 46614496 | 46615017 | 46614496 | ID=Msa0503430-mRNA-1:cds;Parent=Msa0503430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
