Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0958550 | A0A072TDK6 | 59.483 | 116 | 39 | 2 | 1 | 116 | 1 | 108 | 6.07e-36 | 132 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0015400 | Msa0958550 | 0.815514 | 8.892337e-52 | -8.615850e-47 |
Msa0016580 | Msa0958550 | 0.801285 | 9.678075e-49 | -8.615850e-47 |
Msa0018650 | Msa0958550 | 0.814830 | 1.261312e-51 | -8.615850e-47 |
Msa0028700 | Msa0958550 | 0.815009 | 1.151160e-51 | -8.615850e-47 |
Msa0032330 | Msa0958550 | 0.820103 | 8.184890e-53 | -8.615850e-47 |
Msa0044330 | Msa0958550 | 0.806803 | 6.889589e-50 | -8.615850e-47 |
Msa0047110 | Msa0958550 | 0.800804 | 1.213575e-48 | -8.615850e-47 |
Msa0062860 | Msa0958550 | 0.815500 | 8.953270e-52 | -8.615850e-47 |
Msa0075470 | Msa0958550 | 0.808455 | 3.071602e-50 | -8.615850e-47 |
Msa0075880 | Msa0958550 | 0.809978 | 1.448261e-50 | -8.615850e-47 |
Msa0092630 | Msa0958550 | 0.801295 | 9.631515e-49 | -8.615850e-47 |
Msa0099210 | Msa0958550 | 0.804727 | 1.880411e-49 | -8.615850e-47 |
Msa0105070 | Msa0958550 | 0.830236 | 3.290041e-55 | -8.615850e-47 |
Msa0112590 | Msa0958550 | 0.811586 | 6.500410e-51 | -8.615850e-47 |
Msa0602980 | Msa0958550 | 0.823690 | 1.209194e-53 | -8.615850e-47 |
Msa0604350 | Msa0958550 | 0.825276 | 5.120023e-54 | -8.615850e-47 |
Msa0610800 | Msa0958550 | 0.821144 | 4.719326e-53 | -8.615850e-47 |
Msa0613440 | Msa0958550 | 0.802207 | 6.259584e-49 | -8.615850e-47 |
Msa0615010 | Msa0958550 | 0.810526 | 1.103118e-50 | -8.615850e-47 |
Msa0632740 | Msa0958550 | 0.819441 | 1.159640e-52 | -8.615850e-47 |
Msa0639610 | Msa0958550 | 0.819559 | 1.090130e-52 | -8.615850e-47 |
Msa0645300 | Msa0958550 | 0.861873 | 7.555777e-64 | -8.615850e-47 |
Msa0649000 | Msa0958550 | 0.802050 | 6.741733e-49 | -8.615850e-47 |
Msa0649110 | Msa0958550 | 0.805529 | 1.277614e-49 | -8.615850e-47 |
Msa0650630 | Msa0958550 | 0.862110 | 6.390744e-64 | -8.615850e-47 |
Msa0672690 | Msa0958550 | 0.806279 | 8.885725e-50 | -8.615850e-47 |
Msa0694370 | Msa0958550 | 0.808596 | 2.865298e-50 | -8.615850e-47 |
Msa0701010 | Msa0958550 | 0.869303 | 3.424549e-66 | -8.615850e-47 |
Msa0703120 | Msa0958550 | 0.813798 | 2.132425e-51 | -8.615850e-47 |
Msa0703780 | Msa0958550 | 0.806726 | 7.152443e-50 | -8.615850e-47 |
Msa0718100 | Msa0958550 | 0.815844 | 7.506373e-52 | -8.615850e-47 |
Msa0725850 | Msa0958550 | 0.803118 | 4.059706e-49 | -8.615850e-47 |
Msa0726140 | Msa0958550 | 0.803343 | 3.647735e-49 | -8.615850e-47 |
Msa0729800 | Msa0958550 | 0.856373 | 3.362450e-62 | -8.615850e-47 |
Msa0731550 | Msa0958550 | 0.803139 | 4.020655e-49 | -8.615850e-47 |
Msa0731940 | Msa0958550 | 0.847574 | 1.061153e-59 | -8.615850e-47 |
Msa0732540 | Msa0958550 | 0.813821 | 2.107575e-51 | -8.615850e-47 |
Msa0733290 | Msa0958550 | 0.818514 | 1.883976e-52 | -8.615850e-47 |
Msa0738500 | Msa0958550 | 0.838074 | 3.568769e-57 | -8.615850e-47 |
Msa0743810 | Msa0958550 | 0.820043 | 8.450253e-53 | -8.615850e-47 |
Msa0748970 | Msa0958550 | 0.837771 | 4.269072e-57 | -8.615850e-47 |
Msa0750650 | Msa0958550 | 0.807042 | 6.133228e-50 | -8.615850e-47 |
Msa0753720 | Msa0958550 | 0.811259 | 7.655076e-51 | -8.615850e-47 |
Msa0755180 | Msa0958550 | 0.829998 | 3.760276e-55 | -8.615850e-47 |
Msa0756460 | Msa0958550 | 0.814821 | 1.267295e-51 | -8.615850e-47 |
Msa0760130 | Msa0958550 | 0.818113 | 2.322318e-52 | -8.615850e-47 |
Msa0766630 | Msa0958550 | 0.817007 | 4.121408e-52 | -8.615850e-47 |
Msa0767760 | Msa0958550 | 0.824288 | 8.753923e-54 | -8.615850e-47 |
Msa0768290 | Msa0958550 | 0.873134 | 1.860353e-67 | -8.615850e-47 |
Msa0768370 | Msa0958550 | 0.905903 | 2.621980e-80 | -8.615850e-47 |
Msa0773180 | Msa0958550 | 0.842716 | 2.182264e-58 | -8.615850e-47 |
Msa0773540 | Msa0958550 | 0.805177 | 1.513822e-49 | -8.615850e-47 |
Msa0775300 | Msa0958550 | 0.812739 | 3.643394e-51 | -8.615850e-47 |
Msa0783160 | Msa0958550 | 0.814547 | 1.457144e-51 | -8.615850e-47 |
Msa0784290 | Msa0958550 | 0.891358 | 4.271690e-74 | -8.615850e-47 |
Msa0784300 | Msa0958550 | 0.885650 | 6.768979e-72 | -8.615850e-47 |
Msa0808010 | Msa0958550 | 0.843719 | 1.178839e-58 | -8.615850e-47 |
Msa0808020 | Msa0958550 | 0.836859 | 7.307611e-57 | -8.615850e-47 |
Msa0810220 | Msa0958550 | 0.819004 | 1.458116e-52 | -8.615850e-47 |
Msa0811110 | Msa0958550 | 0.808552 | 2.928788e-50 | -8.615850e-47 |
Msa0811270 | Msa0958550 | 0.816215 | 6.203960e-52 | -8.615850e-47 |
Msa0820850 | Msa0958550 | 0.839020 | 2.034066e-57 | -8.615850e-47 |
Msa0824390 | Msa0958550 | 0.808915 | 2.448768e-50 | -8.615850e-47 |
Msa0824590 | Msa0958550 | 0.883482 | 4.323137e-71 | -8.615850e-47 |
Msa0824600 | Msa0958550 | 0.847520 | 1.097745e-59 | -8.615850e-47 |
Msa0825860 | Msa0958550 | 0.806499 | 7.984886e-50 | -8.615850e-47 |
Msa0832340 | Msa0958550 | 0.809521 | 1.815951e-50 | -8.615850e-47 |
Msa0833290 | Msa0958550 | 0.815950 | 7.109529e-52 | -8.615850e-47 |
Msa0123810 | Msa0958550 | 0.803193 | 3.917445e-49 | -8.615850e-47 |
Msa0131770 | Msa0958550 | 0.809760 | 1.613162e-50 | -8.615850e-47 |
Msa0135660 | Msa0958550 | 0.838640 | 2.550559e-57 | -8.615850e-47 |
Msa0165210 | Msa0958550 | 0.802627 | 5.128138e-49 | -8.615850e-47 |
Msa0178960 | Msa0958550 | 0.807164 | 5.777721e-50 | -8.615850e-47 |
Msa0178970 | Msa0958550 | 0.801426 | 9.057115e-49 | -8.615850e-47 |
Msa0180500 | Msa0958550 | 0.845204 | 4.698987e-59 | -8.615850e-47 |
Msa0182740 | Msa0958550 | 0.804165 | 2.462001e-49 | -8.615850e-47 |
Msa0188460 | Msa0958550 | 0.803907 | 2.786678e-49 | -8.615850e-47 |
Msa0198910 | Msa0958550 | 0.828979 | 6.652677e-55 | -8.615850e-47 |
Msa0200000 | Msa0958550 | 0.813924 | 2.000456e-51 | -8.615850e-47 |
Msa0208090 | Msa0958550 | 0.801489 | 8.789053e-49 | -8.615850e-47 |
Msa0227480 | Msa0958550 | 0.815667 | 8.220041e-52 | -8.615850e-47 |
Msa0232850 | Msa0958550 | 0.811145 | 8.103139e-51 | -8.615850e-47 |
Msa0233080 | Msa0958550 | 0.847365 | 1.210940e-59 | -8.615850e-47 |
Msa0365500 | Msa0958550 | 0.823209 | 1.566473e-53 | -8.615850e-47 |
Msa0369730 | Msa0958550 | 0.815394 | 9.457082e-52 | -8.615850e-47 |
Msa0370450 | Msa0958550 | 0.825092 | 5.660880e-54 | -8.615850e-47 |
Msa0371730 | Msa0958550 | 0.826104 | 3.257396e-54 | -8.615850e-47 |
Msa0375870 | Msa0958550 | 0.818554 | 1.845298e-52 | -8.615850e-47 |
Msa0381610 | Msa0958550 | -0.802747 | 4.845454e-49 | -8.615850e-47 |
Msa0384890 | Msa0958550 | 0.855089 | 7.971843e-62 | -8.615850e-47 |
Msa0391180 | Msa0958550 | 0.805610 | 1.228380e-49 | -8.615850e-47 |
Msa0413410 | Msa0958550 | 0.821518 | 3.869801e-53 | -8.615850e-47 |
Msa0414420 | Msa0958550 | 0.813255 | 2.807845e-51 | -8.615850e-47 |
Msa0416650 | Msa0958550 | 0.817438 | 3.297716e-52 | -8.615850e-47 |
Msa0417940 | Msa0958550 | 0.816758 | 4.688754e-52 | -8.615850e-47 |
Msa0424320 | Msa0958550 | 0.867133 | 1.713377e-65 | -8.615850e-47 |
Msa0425790 | Msa0958550 | 0.800581 | 1.347492e-48 | -8.615850e-47 |
Msa0434000 | Msa0958550 | 0.805018 | 1.634306e-49 | -8.615850e-47 |
Msa0434200 | Msa0958550 | 0.806519 | 7.908321e-50 | -8.615850e-47 |
Msa0435230 | Msa0958550 | 0.851407 | 9.056681e-61 | -8.615850e-47 |
Msa0436780 | Msa0958550 | 0.807716 | 4.412210e-50 | -8.615850e-47 |
Msa0444130 | Msa0958550 | 0.817715 | 2.855545e-52 | -8.615850e-47 |
Msa0444750 | Msa0958550 | -0.801879 | 7.311240e-49 | -8.615850e-47 |
Msa0445780 | Msa0958550 | 0.800449 | 1.433635e-48 | -8.615850e-47 |
Msa0450000 | Msa0958550 | 0.857306 | 1.785559e-62 | -8.615850e-47 |
Msa0452900 | Msa0958550 | 0.822078 | 2.870651e-53 | -8.615850e-47 |
Msa0453120 | Msa0958550 | 0.804205 | 2.415113e-49 | -8.615850e-47 |
Msa0453580 | Msa0958550 | 0.815900 | 7.294144e-52 | -8.615850e-47 |
Msa0466120 | Msa0958550 | 0.813301 | 2.742909e-51 | -8.615850e-47 |
Msa0471380 | Msa0958550 | 0.818533 | 1.864936e-52 | -8.615850e-47 |
Msa0479340 | Msa0958550 | 0.881557 | 2.174959e-70 | -8.615850e-47 |
Msa0251320 | Msa0958550 | 0.861963 | 7.087145e-64 | -8.615850e-47 |
Msa0251640 | Msa0958550 | 0.855645 | 5.490468e-62 | -8.615850e-47 |
Msa0267000 | Msa0958550 | 0.825191 | 5.362588e-54 | -8.615850e-47 |
Msa0267010 | Msa0958550 | 0.822084 | 2.861427e-53 | -8.615850e-47 |
Msa0277070 | Msa0958550 | 0.803024 | 4.247312e-49 | -8.615850e-47 |
Msa0278110 | Msa0958550 | 0.832820 | 7.600875e-56 | -8.615850e-47 |
Msa0278190 | Msa0958550 | 0.847907 | 8.589686e-60 | -8.615850e-47 |
Msa0285450 | Msa0958550 | 0.802662 | 5.043346e-49 | -8.615850e-47 |
Msa0290870 | Msa0958550 | 0.817605 | 3.023108e-52 | -8.615850e-47 |
Msa0295770 | Msa0958550 | 0.806105 | 9.670158e-50 | -8.615850e-47 |
Msa0305190 | Msa0958550 | 0.833994 | 3.873168e-56 | -8.615850e-47 |
Msa0307540 | Msa0958550 | 0.827808 | 1.274760e-54 | -8.615850e-47 |
Msa0317290 | Msa0958550 | 0.826005 | 3.439829e-54 | -8.615850e-47 |
Msa0322360 | Msa0958550 | 0.856747 | 2.609818e-62 | -8.615850e-47 |
Msa0340450 | Msa0958550 | 0.805335 | 1.403203e-49 | -8.615850e-47 |
Msa0342750 | Msa0958550 | 0.848264 | 6.846912e-60 | -8.615850e-47 |
Msa0490140 | Msa0958550 | 0.831663 | 1.469567e-55 | -8.615850e-47 |
Msa0491590 | Msa0958550 | 0.814694 | 1.352309e-51 | -8.615850e-47 |
Msa0493000 | Msa0958550 | 0.820426 | 6.903936e-53 | -8.615850e-47 |
Msa0495330 | Msa0958550 | 0.801235 | 9.910085e-49 | -8.615850e-47 |
Msa0501560 | Msa0958550 | 0.814875 | 1.232970e-51 | -8.615850e-47 |
Msa0502340 | Msa0958550 | 0.834900 | 2.294108e-56 | -8.615850e-47 |
Msa0503430 | Msa0958550 | 0.826680 | 2.375584e-54 | -8.615850e-47 |
Msa0505080 | Msa0958550 | 0.801274 | 9.728953e-49 | -8.615850e-47 |
Msa0513060 | Msa0958550 | 0.833112 | 6.429392e-56 | -8.615850e-47 |
Msa0514320 | Msa0958550 | 0.835411 | 1.704618e-56 | -8.615850e-47 |
Msa0516750 | Msa0958550 | 0.829009 | 6.542175e-55 | -8.615850e-47 |
Msa0523940 | Msa0958550 | 0.869684 | 2.573761e-66 | -8.615850e-47 |
Msa0529040 | Msa0958550 | 0.807115 | 5.918642e-50 | -8.615850e-47 |
Msa0532990 | Msa0958550 | 0.802970 | 4.357379e-49 | -8.615850e-47 |
Msa0534540 | Msa0958550 | 0.817445 | 3.284870e-52 | -8.615850e-47 |
Msa0545700 | Msa0958550 | 0.860360 | 2.180518e-63 | -8.615850e-47 |
Msa0562440 | Msa0958550 | 0.803859 | 2.850874e-49 | -8.615850e-47 |
Msa0585230 | Msa0958550 | 0.834579 | 2.762044e-56 | -8.615850e-47 |
Msa0594560 | Msa0958550 | 0.801659 | 8.113064e-49 | -8.615850e-47 |
Msa0598780 | Msa0958550 | 0.819117 | 1.374086e-52 | -8.615850e-47 |
Msa0598990 | Msa0958550 | 0.801456 | 8.928255e-49 | -8.615850e-47 |
Msa0842650 | Msa0958550 | 0.807367 | 5.233466e-50 | -8.615850e-47 |
Msa0844420 | Msa0958550 | 0.813946 | 1.978551e-51 | -8.615850e-47 |
Msa0844450 | Msa0958550 | 0.801352 | 9.375645e-49 | -8.615850e-47 |
Msa0844470 | Msa0958550 | 0.811353 | 7.304624e-51 | -8.615850e-47 |
Msa0844490 | Msa0958550 | 0.873062 | 1.965921e-67 | -8.615850e-47 |
Msa0846330 | Msa0958550 | 0.812616 | 3.875750e-51 | -8.615850e-47 |
Msa0846350 | Msa0958550 | 0.812563 | 3.981749e-51 | -8.615850e-47 |
Msa0848960 | Msa0958550 | 0.841955 | 3.470866e-58 | -8.615850e-47 |
Msa0848990 | Msa0958550 | 0.843339 | 1.489517e-58 | -8.615850e-47 |
Msa0849030 | Msa0958550 | 0.815737 | 7.930320e-52 | -8.615850e-47 |
Msa0850880 | Msa0958550 | 0.809173 | 2.156470e-50 | -8.615850e-47 |
Msa0853520 | Msa0958550 | 0.806205 | 9.212162e-50 | -8.615850e-47 |
Msa0857640 | Msa0958550 | 0.809666 | 1.690137e-50 | -8.615850e-47 |
Msa0858980 | Msa0958550 | 0.851305 | 9.675550e-61 | -8.615850e-47 |
Msa0861130 | Msa0958550 | 0.835927 | 1.261707e-56 | -8.615850e-47 |
Msa0864070 | Msa0958550 | 0.880092 | 7.293714e-70 | -8.615850e-47 |
Msa0872230 | Msa0958550 | 0.805162 | 1.524950e-49 | -8.615850e-47 |
Msa0877250 | Msa0958550 | 0.899630 | 1.638627e-77 | -8.615850e-47 |
Msa0888130 | Msa0958550 | 0.837390 | 5.346914e-57 | -8.615850e-47 |
Msa0888260 | Msa0958550 | 0.801918 | 7.178456e-49 | -8.615850e-47 |
Msa0888370 | Msa0958550 | 0.852268 | 5.159544e-61 | -8.615850e-47 |
Msa0888420 | Msa0958550 | 0.825147 | 5.493025e-54 | -8.615850e-47 |
Msa0890310 | Msa0958550 | 0.823240 | 1.541192e-53 | -8.615850e-47 |
Msa0892080 | Msa0958550 | 0.801322 | 9.509620e-49 | -8.615850e-47 |
Msa0897330 | Msa0958550 | 0.829048 | 6.402249e-55 | -8.615850e-47 |
Msa0899430 | Msa0958550 | 0.978638 | 3.020583e-146 | -8.615850e-47 |
Msa0899450 | Msa0958550 | 0.953601 | 1.915966e-111 | -8.615850e-47 |
Msa0900910 | Msa0958550 | 0.813807 | 2.123506e-51 | -8.615850e-47 |
Msa0901070 | Msa0958550 | 0.833788 | 4.360531e-56 | -8.615850e-47 |
Msa0907070 | Msa0958550 | 0.803608 | 3.214864e-49 | -8.615850e-47 |
Msa0907260 | Msa0958550 | 0.843271 | 1.552645e-58 | -8.615850e-47 |
Msa0907950 | Msa0958550 | 0.813913 | 2.012414e-51 | -8.615850e-47 |
Msa0914270 | Msa0958550 | 0.817566 | 3.086223e-52 | -8.615850e-47 |
Msa0914760 | Msa0958550 | 0.866713 | 2.331668e-65 | -8.615850e-47 |
Msa0924050 | Msa0958550 | 0.842207 | 2.977006e-58 | -8.615850e-47 |
Msa0925250 | Msa0958550 | 0.802800 | 4.724111e-49 | -8.615850e-47 |
Msa0925290 | Msa0958550 | 0.801623 | 8.249661e-49 | -8.615850e-47 |
Msa0927380 | Msa0958550 | 0.912110 | 2.833658e-83 | -8.615850e-47 |
Msa0927390 | Msa0958550 | 0.810370 | 1.192560e-50 | -8.615850e-47 |
Msa0931520 | Msa0958550 | 0.803607 | 3.215450e-49 | -8.615850e-47 |
Msa0935910 | Msa0958550 | 0.812031 | 5.200282e-51 | -8.615850e-47 |
Msa0936300 | Msa0958550 | 0.833474 | 5.222719e-56 | -8.615850e-47 |
Msa0939110 | Msa0958550 | 0.803303 | 3.718175e-49 | -8.615850e-47 |
Msa0939250 | Msa0958550 | 0.807107 | 5.939209e-50 | -8.615850e-47 |
Msa0948320 | Msa0958550 | 0.816369 | 5.731032e-52 | -8.615850e-47 |
Msa0952720 | Msa0958550 | 0.853409 | 2.435535e-61 | -8.615850e-47 |
Msa0953120 | Msa0958550 | 0.849333 | 3.458834e-60 | -8.615850e-47 |
Msa0954910 | Msa0958550 | 0.821168 | 4.659323e-53 | -8.615850e-47 |
Msa0956270 | Msa0958550 | 0.834217 | 3.405584e-56 | -8.615850e-47 |
Msa0958550 | Msa0960740 | 0.803700 | 3.076198e-49 | -8.615850e-47 |
Msa0958550 | Msa0964900 | 0.911422 | 6.192952e-83 | -8.615850e-47 |
Msa0958550 | Msa0966750 | 0.840766 | 7.135932e-58 | -8.615850e-47 |
Msa0958550 | Msa0967280 | 0.846271 | 2.412170e-59 | -8.615850e-47 |
Msa0958550 | Msa0967580 | 0.803990 | 2.677093e-49 | -8.615850e-47 |
Msa0958550 | Msa0973100 | 0.840997 | 6.204071e-58 | -8.615850e-47 |
Msa0958550 | Msa0974080 | 0.861178 | 1.231676e-63 | -8.615850e-47 |
Msa0958550 | Msa0974440 | 0.802570 | 5.269818e-49 | -8.615850e-47 |
Msa0958550 | Msa0976670 | 0.829545 | 4.847850e-55 | -8.615850e-47 |
Msa0958550 | Msa0980090 | 0.805047 | 1.611630e-49 | -8.615850e-47 |
Msa0958550 | Msa0980200 | 0.806282 | 8.874124e-50 | -8.615850e-47 |
Msa0958550 | Msa0981270 | 0.807011 | 6.223959e-50 | -8.615850e-47 |
Msa0958550 | Msa0985560 | 0.801293 | 9.642662e-49 | -8.615850e-47 |
Msa0958550 | Msa0989060 | 0.824231 | 9.026324e-54 | -8.615850e-47 |
Msa0958550 | Msa0989620 | 0.800127 | 1.667483e-48 | -8.615850e-47 |
Msa0958550 | Msa0991830 | 0.830392 | 3.013754e-55 | -8.615850e-47 |
Msa0958550 | Msa0994030 | 0.802417 | 5.666278e-49 | -8.615850e-47 |
Msa0958550 | Msa0997370 | 0.814287 | 1.663341e-51 | -8.615850e-47 |
Msa0958550 | Msa0997500 | 0.804461 | 2.136869e-49 | -8.615850e-47 |
Msa0958550 | Msa0998690 | 0.835021 | 2.137970e-56 | -8.615850e-47 |
Msa0958550 | Msa0999120 | 0.809488 | 1.845968e-50 | -8.615850e-47 |
Msa0958550 | Msa0999220 | 0.854975 | 8.600075e-62 | -8.615850e-47 |
Msa0958550 | Msa1000880 | 0.816985 | 4.168421e-52 | -8.615850e-47 |
Msa0958550 | Msa1000890 | 0.853102 | 2.981973e-61 | -8.615850e-47 |
Msa0958550 | Msa1000900 | 0.848539 | 5.745398e-60 | -8.615850e-47 |
Msa0958550 | Msa1002810 | 0.827354 | 1.638571e-54 | -8.615850e-47 |
Msa0958550 | Msa1012590 | -0.808742 | 2.667568e-50 | -8.615850e-47 |
Msa0958550 | Msa1014540 | 0.827169 | 1.814271e-54 | -8.615850e-47 |
Msa0958550 | Msa1015490 | 0.835462 | 1.655026e-56 | -8.615850e-47 |
Msa0958550 | Msa1016280 | 0.815084 | 1.108112e-51 | -8.615850e-47 |
Msa0958550 | Msa1023050 | 0.839118 | 1.918137e-57 | -8.615850e-47 |
Msa0958550 | Msa1025360 | 0.831373 | 1.731881e-55 | -8.615850e-47 |
Msa0958550 | Msa1025370 | 0.822938 | 1.812583e-53 | -8.615850e-47 |
Msa0958550 | Msa1028230 | 0.841678 | 4.108625e-58 | -8.615850e-47 |
Msa0958550 | Msa1029240 | 0.814910 | 1.210822e-51 | -8.615850e-47 |
Msa0958550 | Msa1030970 | 0.804434 | 2.164602e-49 | -8.615850e-47 |
Msa0958550 | Msa1044830 | 0.828082 | 1.095403e-54 | -8.615850e-47 |
Msa0958550 | Msa1044840 | 0.832209 | 1.076925e-55 | -8.615850e-47 |
Msa0958550 | Msa1050680 | 0.811332 | 7.382821e-51 | -8.615850e-47 |
Msa0958550 | Msa1052330 | 0.827025 | 1.964975e-54 | -8.615850e-47 |
Msa0958550 | Msa1057920 | 0.805804 | 1.118383e-49 | -8.615850e-47 |
Msa0958550 | Msa1060840 | 0.850280 | 1.880368e-60 | -8.615850e-47 |
Msa0958550 | Msa1065570 | 0.812001 | 5.280131e-51 | -8.615850e-47 |
Msa0958550 | Msa1068420 | 0.809641 | 1.711854e-50 | -8.615850e-47 |
Msa0958550 | Msa1069220 | 0.842860 | 1.997515e-58 | -8.615850e-47 |
Msa0958550 | Msa1075540 | 0.803569 | 3.274406e-49 | -8.615850e-47 |
Msa0958550 | Msa1075650 | 0.804664 | 1.937592e-49 | -8.615850e-47 |
Msa0958550 | Msa1082580 | 0.830849 | 2.328736e-55 | -8.615850e-47 |
Msa0958550 | Msa1085740 | 0.823332 | 1.466587e-53 | -8.615850e-47 |
Msa0958550 | Msa1092990 | 0.806280 | 8.879965e-50 | -8.615850e-47 |
Msa0958550 | Msa1099970 | 0.808153 | 3.562390e-50 | -8.615850e-47 |
Msa0958550 | Msa1099980 | 0.818002 | 2.459557e-52 | -8.615850e-47 |
Msa0958550 | Msa1110090 | 0.814740 | 1.320913e-51 | -8.615850e-47 |
Msa0958550 | Msa1112300 | 0.839738 | 1.323971e-57 | -8.615850e-47 |
Msa0958550 | Msa1113170 | 0.825557 | 4.393969e-54 | -8.615850e-47 |
Msa0958550 | Msa1115100 | 0.808115 | 3.628780e-50 | -8.615850e-47 |
Msa0958550 | Msa1117150 | 0.811170 | 8.005404e-51 | -8.615850e-47 |
Msa0958550 | Msa1120610 | 0.858912 | 5.948353e-63 | -8.615850e-47 |
Msa0958550 | Msa1121200 | 0.823905 | 1.076823e-53 | -8.615850e-47 |
Msa0958550 | Msa1121480 | 0.867936 | 9.474430e-66 | -8.615850e-47 |
Msa0958550 | Msa1121490 | 0.873420 | 1.491462e-67 | -8.615850e-47 |
Msa0958550 | Msa1135220 | 0.818003 | 2.459076e-52 | -8.615850e-47 |
Msa0958550 | Msa1136090 | 0.819315 | 1.238894e-52 | -8.615850e-47 |
Msa0958550 | Msa1137570 | 0.824883 | 6.341463e-54 | -8.615850e-47 |
Msa0958550 | Msa1139680 | 0.832626 | 8.490826e-56 | -8.615850e-47 |
Msa0958550 | Msa1144450 | 0.814170 | 1.765808e-51 | -8.615850e-47 |
Msa0958550 | Msa1146120 | 0.811002 | 8.703728e-51 | -8.615850e-47 |
Msa0958550 | Msa1149360 | 0.828149 | 1.055376e-54 | -8.615850e-47 |
Msa0958550 | Msa1150370 | 0.818891 | 1.547302e-52 | -8.615850e-47 |
Msa0958550 | Msa1156020 | 0.851157 | 1.065277e-60 | -8.615850e-47 |
Msa0958550 | Msa1162550 | -0.804263 | 2.349481e-49 | -8.615850e-47 |
Msa0958550 | Msa1174910 | 0.816415 | 5.595975e-52 | -8.615850e-47 |
Msa0958550 | Msa1178180 | 0.800740 | 1.250549e-48 | -8.615850e-47 |
Msa0958550 | Msa1182090 | 0.805140 | 1.541354e-49 | -8.615850e-47 |
Msa0958550 | Msa1184420 | 0.848019 | 7.999782e-60 | -8.615850e-47 |
Msa0958550 | Msa1185110 | 0.846636 | 1.917237e-59 | -8.615850e-47 |
Msa0958550 | Msa1195180 | 0.818366 | 2.034666e-52 | -8.615850e-47 |
Msa0958550 | Msa1195190 | 0.813789 | 2.143061e-51 | -8.615850e-47 |
Msa0958550 | Msa1205020 | 0.823001 | 1.751880e-53 | -8.615850e-47 |
Msa0958550 | Msa1211140 | -0.803981 | 2.689593e-49 | -8.615850e-47 |
Msa0958550 | Msa1222620 | 0.802723 | 4.899436e-49 | -8.615850e-47 |
Msa0958550 | Msa1227730 | 0.825129 | 5.545186e-54 | -8.615850e-47 |
Msa0958550 | Msa1230430 | 0.824269 | 8.845716e-54 | -8.615850e-47 |
Msa0958550 | Msa1244250 | 0.808675 | 2.756465e-50 | -8.615850e-47 |
Msa0958550 | Msa1248300 | 0.823272 | 1.514605e-53 | -8.615850e-47 |
Msa0958550 | Msa1248310 | 0.854018 | 1.627059e-61 | -8.615850e-47 |
Msa0958550 | Msa1248370 | 0.843311 | 1.514841e-58 | -8.615850e-47 |
Msa0958550 | Msa1249490 | 0.809460 | 1.871922e-50 | -8.615850e-47 |
Msa0958550 | Msa1270230 | 0.812582 | 3.943290e-51 | -8.615850e-47 |
Msa0958550 | Msa1273230 | 0.805929 | 1.052728e-49 | -8.615850e-47 |
Msa0958550 | Msa1276600 | 0.810746 | 9.887659e-51 | -8.615850e-47 |
Msa0958550 | Msa1276890 | 0.835262 | 1.859092e-56 | -8.615850e-47 |
Msa0958550 | Msa1277660 | 0.818032 | 2.422569e-52 | -8.615850e-47 |
Msa0958550 | Msa1283330 | 0.814792 | 1.285973e-51 | -8.615850e-47 |
Msa0958550 | Msa1284680 | 0.847603 | 1.041940e-59 | -8.615850e-47 |
Msa0958550 | Msa1285930 | 0.807726 | 4.390567e-50 | -8.615850e-47 |
Msa0958550 | Msa1286800 | 0.826871 | 2.138000e-54 | -8.615850e-47 |
Msa0958550 | Msa1287190 | 0.819944 | 8.902768e-53 | -8.615850e-47 |
Msa0958550 | Msa1287800 | 0.806690 | 7.276887e-50 | -8.615850e-47 |
Msa0958550 | Msa1287810 | 0.817708 | 2.865882e-52 | -8.615850e-47 |
Msa0958550 | Msa1288560 | 0.855359 | 6.651683e-62 | -8.615850e-47 |
Msa0958550 | Msa1289420 | 0.812664 | 3.782694e-51 | -8.615850e-47 |
Msa0958550 | Msa1307890 | 0.803865 | 2.842888e-49 | -8.615850e-47 |
Msa0958550 | Msa1312950 | 0.802988 | 4.318897e-49 | -8.615850e-47 |
Msa0958550 | Msa1320300 | 0.825315 | 5.011268e-54 | -8.615850e-47 |
Msa0958550 | Msa1334250 | 0.803363 | 3.613544e-49 | -8.615850e-47 |
Msa0958550 | Msa1340590 | 0.837635 | 4.627609e-57 | -8.615850e-47 |
Msa0958550 | Msa1344520 | 0.838479 | 2.806784e-57 | -8.615850e-47 |
Msa0958550 | Msa1366810 | 0.868307 | 7.196311e-66 | -8.615850e-47 |
Msa0958550 | Msa1366970 | 0.801099 | 1.056238e-48 | -8.615850e-47 |
Msa0958550 | Msa1369430 | 0.819740 | 9.911152e-53 | -8.615850e-47 |
Msa0958550 | Msa1378940 | 0.814010 | 1.915373e-51 | -8.615850e-47 |
Msa0958550 | Msa1387280 | 0.801522 | 8.652115e-49 | -8.615850e-47 |
Msa0958550 | Msa1395900 | 0.810800 | 9.626960e-51 | -8.615850e-47 |
Msa0958550 | Msa1397150 | 0.800443 | 1.438128e-48 | -8.615850e-47 |
Msa0958550 | Msa1397580 | 0.844906 | 5.655553e-59 | -8.615850e-47 |
Msa0958550 | Msa1400720 | 0.841557 | 4.421225e-58 | -8.615850e-47 |
Msa0958550 | Msa1402770 | 0.801587 | 8.394467e-49 | -8.615850e-47 |
Msa0958550 | Msa1402790 | 0.859881 | 3.043222e-63 | -8.615850e-47 |
Msa0958550 | Msa1403480 | 0.820136 | 8.042524e-53 | -8.615850e-47 |
Msa0958550 | Msa1404000 | 0.805124 | 1.552888e-49 | -8.615850e-47 |
Msa0958550 | Msa1410680 | 0.828575 | 8.329232e-55 | -8.615850e-47 |
Msa0958550 | Msa1420820 | 0.829233 | 5.771843e-55 | -8.615850e-47 |
Msa0958550 | Msa1422180 | 0.819285 | 1.258400e-52 | -8.615850e-47 |
Msa0958550 | Msa1443060 | 0.822206 | 2.681712e-53 | -8.615850e-47 |
Msa0958550 | Msa1444440 | 0.812443 | 4.228239e-51 | -8.615850e-47 |
Msa0958550 | Msa1451570 | 0.811337 | 7.364329e-51 | -8.615850e-47 |
Msa0958550 | Msa1451620 | -0.805602 | 1.233061e-49 | -8.615850e-47 |
Msa0958550 | Msa1458750 | 0.812172 | 4.845735e-51 | -8.615850e-47 |
Msa0958550 | Msa1466830 | 0.814209 | 1.730992e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0958550 | MtrunA17_Chr6g0485551 | 59.483 | 116 | 39 | 2 | 1 | 116 | 1 | 108 | 1.17e-39 | 132 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 24 sgRNAs with CRISPR-Local
Find 52 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGCTGAAATTCTGGAAATA+AGG | 0.320988 | 6_3:+72524021 | Msa0958550:CDS |
TCAGGACCCACATATAATTA+TGG | 0.337723 | 6_3:+72523548 | Msa0958550:CDS |
TTCAATCACTTCATCATAAT+AGG | 0.365862 | 6_3:-72523741 | None:intergenic |
AATTATGGCAAAAGGAGATC+TGG | 0.371566 | 6_3:+72523563 | Msa0958550:CDS |
GGAAGCTGAAAGGAAGGAAA+AGG | 0.444058 | 6_3:+72524085 | Msa0958550:CDS |
AGAGGAGGAAGCTGAAAGGA+AGG | 0.454150 | 6_3:+72524079 | Msa0958550:CDS |
TCGTGATTTAAATCAGCATC+AGG | 0.464071 | 6_3:-72523788 | None:intergenic |
AGAAATCTAAGCCAACTACT+TGG | 0.472779 | 6_3:+72523519 | Msa0958550:CDS |
AGGAGGAAGCTGAAATGAAA+AGG | 0.473270 | 6_3:+72524051 | Msa0958550:CDS |
GGAAGCTGAAATGAAAAGGA+AGG | 0.493440 | 6_3:+72524055 | Msa0958550:CDS |
TCTGGAAATAAGGAAGGAAA+AGG | 0.493692 | 6_3:+72524031 | Msa0958550:CDS |
AGCTGAAAGGAAGGAAAAGG+AGG | 0.497172 | 6_3:+72524088 | Msa0958550:CDS |
CCAACTACTTGGGTCATCTC+AGG | 0.497404 | 6_3:+72523530 | Msa0958550:CDS |
CCACATATAATTATGGCAAA+AGG | 0.513516 | 6_3:+72523555 | Msa0958550:CDS |
AGGAAGAGGAGGAAGCTGAA+AGG | 0.516462 | 6_3:+72524075 | Msa0958550:CDS |
GAAATCTAAGCCAACTACTT+GGG | 0.528517 | 6_3:+72523520 | Msa0958550:CDS |
TGAAATGAAAAGGAAGGAAG+AGG | 0.532757 | 6_3:+72524061 | Msa0958550:CDS |
ATTATGGCAAAAGGAGATCT+GGG | 0.533808 | 6_3:+72523564 | Msa0958550:CDS |
CCTGAGATGACCCAAGTAGT+TGG | 0.545425 | 6_3:-72523530 | None:intergenic |
GGAAATAAGGAAGGAAAAGG+AGG | 0.550433 | 6_3:+72524034 | Msa0958550:CDS |
TGAAATTCTGGAAATAAGGA+AGG | 0.567609 | 6_3:+72524025 | Msa0958550:CDS |
AATGAAAAGGAAGGAAGAGG+AGG | 0.596938 | 6_3:+72524064 | Msa0958550:CDS |
TGATGCTGATTTAAATCACG+AGG | 0.690474 | 6_3:+72523790 | Msa0958550:CDS |
TCTTCCACAAATGACTGACG+AGG | 0.715715 | 6_3:+72523496 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTATAGAAAATAATAATAAA+GGG | - | chr6_3:72523702-72523721 | None:intergenic | 10.0% |
!!! | ATTTTTTAATATAAGTTTGC+CGG | - | chr6_3:72523597-72523616 | None:intergenic | 15.0% |
!! | GGTATAGAAAATAATAATAA+AGG | - | chr6_3:72523703-72523722 | None:intergenic | 15.0% |
!! | TGAAAAAGCAAATTAAAAAA+AGG | + | chr6_3:72523998-72524017 | Msa0958550:intron | 15.0% |
!! | ATAATAATAAAGGGCTAAAA+CGG | - | chr6_3:72523693-72523712 | None:intergenic | 20.0% |
!! | GAAAAAGAAAATGAAAAAGA+AGG | + | chr6_3:72524160-72524179 | Msa0958550:CDS | 20.0% |
!! | CTTTTGCCATAATTATATGT+GGG | - | chr6_3:72523557-72523576 | None:intergenic | 25.0% |
! | TTCAATCACTTCATCATAAT+AGG | - | chr6_3:72523744-72523763 | None:intergenic | 25.0% |
!! | TGAAATTCTGAAAAAAAGCA+AGG | + | chr6_3:72524115-72524134 | Msa0958550:CDS | 25.0% |
! | CCTTTTGCCATAATTATATG+TGG | - | chr6_3:72523558-72523577 | None:intergenic | 30.0% |
CCACATATAATTATGGCAAA+AGG | + | chr6_3:72523555-72523574 | Msa0958550:CDS | 30.0% | |
!!! | AATATAAGTTTGCCGGTTTT+TGG | - | chr6_3:72523590-72523609 | None:intergenic | 30.0% |
AAAAAATGATACAGATCACC+AGG | + | chr6_3:72523610-72523629 | Msa0958550:CDS | 30.0% | |
AAAAAAGGAAGCTGAAATTC+TGG | + | chr6_3:72524013-72524032 | Msa0958550:intron | 30.0% | |
! | AAGCTGAAATTCTGGAAATA+AGG | + | chr6_3:72524021-72524040 | Msa0958550:CDS | 30.0% |
! | TGAAATTCTGGAAATAAGGA+AGG | + | chr6_3:72524025-72524044 | Msa0958550:CDS | 30.0% |
GAAAAAAAGCAAGGAAAAGA+AGG | + | chr6_3:72524124-72524143 | Msa0958550:CDS | 30.0% | |
CTAAAAAAGTTTGTGAGGAA+GGG | + | chr6_3:72524207-72524226 | Msa0958550:CDS | 30.0% | |
TAAAAAAGTTTGTGAGGAAG+GGG | + | chr6_3:72524208-72524227 | Msa0958550:CDS | 30.0% | |
AGAAATCTAAGCCAACTACT+TGG | + | chr6_3:72523519-72523538 | Msa0958550:CDS | 35.0% | |
GAAATCTAAGCCAACTACTT+GGG | + | chr6_3:72523520-72523539 | Msa0958550:CDS | 35.0% | |
TCAGGACCCACATATAATTA+TGG | + | chr6_3:72523548-72523567 | Msa0958550:CDS | 35.0% | |
AATTATGGCAAAAGGAGATC+TGG | + | chr6_3:72523563-72523582 | Msa0958550:CDS | 35.0% | |
ATTATGGCAAAAGGAGATCT+GGG | + | chr6_3:72523564-72523583 | Msa0958550:CDS | 35.0% | |
AACGATCAAAAAATCATGCC+TGG | - | chr6_3:72523631-72523650 | None:intergenic | 35.0% | |
AGGAATCAAAAAACTTCTGC+AGG | - | chr6_3:72523724-72523743 | None:intergenic | 35.0% | |
TCGTGATTTAAATCAGCATC+AGG | - | chr6_3:72523791-72523810 | None:intergenic | 35.0% | |
!! | TGATGCTGATTTAAATCACG+AGG | + | chr6_3:72523790-72523809 | Msa0958550:CDS | 35.0% |
! | TCGAAGTTCTTTACGGTTTT+CGG | - | chr6_3:72523974-72523993 | None:intergenic | 35.0% |
AAAACCGTAAAGAACTTCGA+AGG | + | chr6_3:72523974-72523993 | Msa0958550:intron | 35.0% | |
TCTGGAAATAAGGAAGGAAA+AGG | + | chr6_3:72524031-72524050 | Msa0958550:CDS | 35.0% | |
TGAAATGAAAAGGAAGGAAG+AGG | + | chr6_3:72524061-72524080 | Msa0958550:CDS | 35.0% | |
AGCAGCTAAAAAAGTTTGTG+AGG | + | chr6_3:72524202-72524221 | Msa0958550:CDS | 35.0% | |
GCTAAAAAAGTTTGTGAGGA+AGG | + | chr6_3:72524206-72524225 | Msa0958550:CDS | 35.0% | |
!! | CTAAACAACTGCTGGTTTAG+AGG | - | chr6_3:72523904-72523923 | None:intergenic | 40.0% |
CTCTAAACCAGCAGTTGTTT+AGG | + | chr6_3:72523902-72523921 | Msa0958550:intron | 40.0% | |
! | TTTTCAGCCTAAACAACTGC+TGG | - | chr6_3:72523912-72523931 | None:intergenic | 40.0% |
TCAGCCTTCGAAGTTCTTTA+CGG | - | chr6_3:72523981-72524000 | None:intergenic | 40.0% | |
GGAAATAAGGAAGGAAAAGG+AGG | + | chr6_3:72524034-72524053 | Msa0958550:CDS | 40.0% | |
AGGAGGAAGCTGAAATGAAA+AGG | + | chr6_3:72524051-72524070 | Msa0958550:CDS | 40.0% | |
GGAAGCTGAAATGAAAAGGA+AGG | + | chr6_3:72524055-72524074 | Msa0958550:CDS | 40.0% | |
AATGAAAAGGAAGGAAGAGG+AGG | + | chr6_3:72524064-72524083 | Msa0958550:CDS | 40.0% | |
TGTTTAGGCTGAAAACTGCG+TGG | + | chr6_3:72523917-72523936 | Msa0958550:intron | 45.0% | |
! | AAAACTGCGTGGTTTGGCAA+AGG | + | chr6_3:72523928-72523947 | Msa0958550:intron | 45.0% |
GGAAGCTGAAAGGAAGGAAA+AGG | + | chr6_3:72524085-72524104 | Msa0958550:CDS | 45.0% | |
AGCTGAAAGGAAGGAAAAGG+AGG | + | chr6_3:72524088-72524107 | Msa0958550:CDS | 45.0% | |
CCTGAGATGACCCAAGTAGT+TGG | - | chr6_3:72523533-72523552 | None:intergenic | 50.0% | |
CCAACTACTTGGGTCATCTC+AGG | + | chr6_3:72523530-72523549 | Msa0958550:CDS | 50.0% | |
AGGAGATCTGGGCCAAAAAC+CGG | + | chr6_3:72523575-72523594 | Msa0958550:CDS | 50.0% | |
AGGCTGAAAACTGCGTGGTT+TGG | + | chr6_3:72523922-72523941 | Msa0958550:intron | 50.0% | |
AGGAAGAGGAGGAAGCTGAA+AGG | + | chr6_3:72524075-72524094 | Msa0958550:CDS | 50.0% | |
AGAGGAGGAAGCTGAAAGGA+AGG | + | chr6_3:72524079-72524098 | Msa0958550:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 72523506 | 72524244 | 72523506 | ID=Msa0958550;Name=Msa0958550 |
chr6_3 | mRNA | 72523506 | 72524244 | 72523506 | ID=Msa0958550-mRNA-1;Parent=Msa0958550;Name=Msa0958550-mRNA-1;_AED=0.33;_eAED=0.34;_QI=0|0|0|1|1|1|3|0|144 |
chr6_3 | exon | 72523506 | 72523631 | 72523506 | ID=Msa0958550-mRNA-1:exon:13220;Parent=Msa0958550-mRNA-1 |
chr6_3 | exon | 72523728 | 72523811 | 72523728 | ID=Msa0958550-mRNA-1:exon:13221;Parent=Msa0958550-mRNA-1 |
chr6_3 | exon | 72524020 | 72524244 | 72524020 | ID=Msa0958550-mRNA-1:exon:13222;Parent=Msa0958550-mRNA-1 |
chr6_3 | CDS | 72523506 | 72523631 | 72523506 | ID=Msa0958550-mRNA-1:cds;Parent=Msa0958550-mRNA-1 |
chr6_3 | CDS | 72523728 | 72523811 | 72523728 | ID=Msa0958550-mRNA-1:cds;Parent=Msa0958550-mRNA-1 |
chr6_3 | CDS | 72524020 | 72524244 | 72524020 | ID=Msa0958550-mRNA-1:cds;Parent=Msa0958550-mRNA-1 |
Gene Sequence |
Protein sequence |