Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384890 | XP_013462188.2 | 88.039 | 811 | 66 | 4 | 1 | 781 | 1 | 810 | 0.0 | 1388 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384890 | sp|Q9SJT7|VHAA2_ARATH | 66.005 | 806 | 245 | 4 | 1 | 778 | 15 | 819 | 0.0 | 1076 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384890 | A0A1S2Y9G1 | 81.111 | 810 | 123 | 3 | 1 | 781 | 21 | 829 | 0.0 | 1298 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016580 | Msa0384890 | 0.800602 | 1.334368e-48 | -8.615850e-47 |
| Msa0021510 | Msa0384890 | 0.802522 | 5.391791e-49 | -8.615850e-47 |
| Msa0044260 | Msa0384890 | 0.807740 | 4.360673e-50 | -8.615850e-47 |
| Msa0056530 | Msa0384890 | 0.813709 | 2.231091e-51 | -8.615850e-47 |
| Msa0075470 | Msa0384890 | 0.801769 | 7.699968e-49 | -8.615850e-47 |
| Msa0075880 | Msa0384890 | 0.812937 | 3.297820e-51 | -8.615850e-47 |
| Msa0076220 | Msa0384890 | 0.800661 | 1.297712e-48 | -8.615850e-47 |
| Msa0105070 | Msa0384890 | 0.822646 | 2.119372e-53 | -8.615850e-47 |
| Msa0117710 | Msa0384890 | 0.805773 | 1.135526e-49 | -8.615850e-47 |
| Msa0124250 | Msa0384890 | 0.800157 | 1.643845e-48 | -8.615850e-47 |
| Msa0142220 | Msa0384890 | 0.846795 | 1.735449e-59 | -8.615850e-47 |
| Msa0158480 | Msa0384890 | 0.810030 | 1.411706e-50 | -8.615850e-47 |
| Msa0182740 | Msa0384890 | 0.804431 | 2.167120e-49 | -8.615850e-47 |
| Msa0188460 | Msa0384890 | 0.843304 | 1.521635e-58 | -8.615850e-47 |
| Msa0200000 | Msa0384890 | 0.831136 | 1.980531e-55 | -8.615850e-47 |
| Msa0208090 | Msa0384890 | 0.824474 | 7.914053e-54 | -8.615850e-47 |
| Msa0214300 | Msa0384890 | 0.810798 | 9.635903e-51 | -8.615850e-47 |
| Msa0227480 | Msa0384890 | 0.843712 | 1.184055e-58 | -8.615850e-47 |
| Msa0229590 | Msa0384890 | 0.801191 | 1.011750e-48 | -8.615850e-47 |
| Msa0231000 | Msa0384890 | 0.828009 | 1.140563e-54 | -8.615850e-47 |
| Msa0232850 | Msa0384890 | 0.827852 | 1.244119e-54 | -8.615850e-47 |
| Msa0233300 | Msa0384890 | 0.825670 | 4.129254e-54 | -8.615850e-47 |
| Msa0365500 | Msa0384890 | 0.822159 | 2.749318e-53 | -8.615850e-47 |
| Msa0371730 | Msa0384890 | 0.806331 | 8.662458e-50 | -8.615850e-47 |
| Msa0375870 | Msa0384890 | 0.810599 | 1.064101e-50 | -8.615850e-47 |
| Msa0378360 | Msa0384890 | 0.805217 | 1.485421e-49 | -8.615850e-47 |
| Msa0384800 | Msa0384890 | 0.812285 | 4.579169e-51 | -8.615850e-47 |
| Msa0384890 | Msa0390070 | 0.822754 | 2.000413e-53 | -8.615850e-47 |
| Msa0384890 | Msa0391180 | 0.811139 | 8.128629e-51 | -8.615850e-47 |
| Msa0384890 | Msa0394970 | 0.822075 | 2.875261e-53 | -8.615850e-47 |
| Msa0384890 | Msa0402290 | 0.817849 | 2.663628e-52 | -8.615850e-47 |
| Msa0384890 | Msa0407750 | 0.813562 | 2.404208e-51 | -8.615850e-47 |
| Msa0384890 | Msa0408110 | 0.802594 | 5.210431e-49 | -8.615850e-47 |
| Msa0384890 | Msa0414230 | 0.812038 | 5.184238e-51 | -8.615850e-47 |
| Msa0384890 | Msa0414410 | 0.841131 | 5.722940e-58 | -8.615850e-47 |
| Msa0384890 | Msa0414420 | 0.814870 | 1.236135e-51 | -8.615850e-47 |
| Msa0384890 | Msa0419980 | 0.831491 | 1.620069e-55 | -8.615850e-47 |
| Msa0384890 | Msa0424320 | 0.809064 | 2.275724e-50 | -8.615850e-47 |
| Msa0384890 | Msa0424550 | 0.803345 | 3.644949e-49 | -8.615850e-47 |
| Msa0384890 | Msa0427710 | 0.817881 | 2.620593e-52 | -8.615850e-47 |
| Msa0384890 | Msa0428000 | 0.811930 | 5.472425e-51 | -8.615850e-47 |
| Msa0384890 | Msa0428010 | 0.812316 | 4.506821e-51 | -8.615850e-47 |
| Msa0384890 | Msa0430420 | 0.816806 | 4.573151e-52 | -8.615850e-47 |
| Msa0384890 | Msa0435230 | 0.912874 | 1.181162e-83 | -8.615850e-47 |
| Msa0384890 | Msa0436780 | 0.836769 | 7.704844e-57 | -8.615850e-47 |
| Msa0384890 | Msa0436800 | 0.828029 | 1.128430e-54 | -8.615850e-47 |
| Msa0384890 | Msa0438620 | 0.821982 | 3.021446e-53 | -8.615850e-47 |
| Msa0384890 | Msa0450000 | 0.839210 | 1.815741e-57 | -8.615850e-47 |
| Msa0384890 | Msa0452900 | 0.828964 | 6.706470e-55 | -8.615850e-47 |
| Msa0384890 | Msa0453120 | 0.824070 | 9.851772e-54 | -8.615850e-47 |
| Msa0384890 | Msa0459170 | 0.804690 | 1.913597e-49 | -8.615850e-47 |
| Msa0384890 | Msa0461790 | 0.832638 | 8.432001e-56 | -8.615850e-47 |
| Msa0384890 | Msa0466120 | 0.802192 | 6.304307e-49 | -8.615850e-47 |
| Msa0384890 | Msa0471380 | 0.818767 | 1.650314e-52 | -8.615850e-47 |
| Msa0384890 | Msa0479340 | 0.934282 | 5.141664e-96 | -8.615850e-47 |
| Msa0384890 | Msa0491590 | 0.838769 | 2.361545e-57 | -8.615850e-47 |
| Msa0384890 | Msa0501560 | 0.811312 | 7.455971e-51 | -8.615850e-47 |
| Msa0384890 | Msa0502340 | 0.815696 | 8.100986e-52 | -8.615850e-47 |
| Msa0384890 | Msa0503430 | 0.812778 | 3.571989e-51 | -8.615850e-47 |
| Msa0384890 | Msa0505080 | 0.807306 | 5.390173e-50 | -8.615850e-47 |
| Msa0384890 | Msa0506270 | 0.815832 | 7.552709e-52 | -8.615850e-47 |
| Msa0384890 | Msa0518540 | 0.814093 | 1.836022e-51 | -8.615850e-47 |
| Msa0384890 | Msa0523940 | 0.820691 | 6.000618e-53 | -8.615850e-47 |
| Msa0384890 | Msa0532350 | 0.806927 | 6.485487e-50 | -8.615850e-47 |
| Msa0384890 | Msa0534540 | 0.827307 | 1.682127e-54 | -8.615850e-47 |
| Msa0384890 | Msa0585230 | 0.823319 | 1.477077e-53 | -8.615850e-47 |
| Msa0384890 | Msa0596150 | 0.801311 | 9.559570e-49 | -8.615850e-47 |
| Msa0384890 | Msa0598780 | 0.838194 | 3.324764e-57 | -8.615850e-47 |
| Msa0384890 | Msa0600700 | 0.814470 | 1.515463e-51 | -8.615850e-47 |
| Msa0384890 | Msa0604350 | 0.810848 | 9.399901e-51 | -8.615850e-47 |
| Msa0384890 | Msa0636170 | 0.803842 | 2.874763e-49 | -8.615850e-47 |
| Msa0384890 | Msa0639610 | 0.842577 | 2.375117e-58 | -8.615850e-47 |
| Msa0384890 | Msa0645300 | 0.800209 | 1.604315e-48 | -8.615850e-47 |
| Msa0384890 | Msa0650630 | 0.804076 | 2.570097e-49 | -8.615850e-47 |
| Msa0384890 | Msa0661230 | 0.810007 | 1.427372e-50 | -8.615850e-47 |
| Msa0384890 | Msa0665020 | 0.805268 | 1.448865e-49 | -8.615850e-47 |
| Msa0384890 | Msa0672690 | 0.814112 | 1.818438e-51 | -8.615850e-47 |
| Msa0384890 | Msa0688270 | 0.814806 | 1.277006e-51 | -8.615850e-47 |
| Msa0384890 | Msa0694370 | 0.821507 | 3.891245e-53 | -8.615850e-47 |
| Msa0384890 | Msa0697060 | 0.800825 | 1.201954e-48 | -8.615850e-47 |
| Msa0384890 | Msa0701010 | 0.830659 | 2.592326e-55 | -8.615850e-47 |
| Msa0384890 | Msa0725850 | 0.839857 | 1.232521e-57 | -8.615850e-47 |
| Msa0384890 | Msa0726140 | 0.842015 | 3.347044e-58 | -8.615850e-47 |
| Msa0384890 | Msa0729800 | 0.833696 | 4.598521e-56 | -8.615850e-47 |
| Msa0384890 | Msa0731940 | 0.831993 | 1.218045e-55 | -8.615850e-47 |
| Msa0384890 | Msa0733290 | 0.838625 | 2.573694e-57 | -8.615850e-47 |
| Msa0384890 | Msa0743810 | 0.835728 | 1.417557e-56 | -8.615850e-47 |
| Msa0384890 | Msa0745060 | 0.825365 | 4.877610e-54 | -8.615850e-47 |
| Msa0384890 | Msa0753720 | 0.818803 | 1.619807e-52 | -8.615850e-47 |
| Msa0384890 | Msa0755180 | 0.812094 | 5.039893e-51 | -8.615850e-47 |
| Msa0384890 | Msa0760130 | 0.808970 | 2.383598e-50 | -8.615850e-47 |
| Msa0384890 | Msa0763440 | 0.800319 | 1.523683e-48 | -8.615850e-47 |
| Msa0384890 | Msa0766630 | 0.857784 | 1.288996e-62 | -8.615850e-47 |
| Msa0384890 | Msa0767720 | 0.812199 | 4.781046e-51 | -8.615850e-47 |
| Msa0384890 | Msa0768290 | 0.823109 | 1.653186e-53 | -8.615850e-47 |
| Msa0384890 | Msa0768310 | 0.816071 | 6.681336e-52 | -8.615850e-47 |
| Msa0384890 | Msa0768370 | 0.840037 | 1.106328e-57 | -8.615850e-47 |
| Msa0384890 | Msa0775300 | 0.806086 | 9.757313e-50 | -8.615850e-47 |
| Msa0384890 | Msa0777870 | 0.805102 | 1.569595e-49 | -8.615850e-47 |
| Msa0384890 | Msa0783160 | 0.827772 | 1.300618e-54 | -8.615850e-47 |
| Msa0384890 | Msa0784290 | 0.831332 | 1.772232e-55 | -8.615850e-47 |
| Msa0384890 | Msa0784300 | 0.835102 | 2.040179e-56 | -8.615850e-47 |
| Msa0384890 | Msa0808010 | 0.843923 | 1.039400e-58 | -8.615850e-47 |
| Msa0384890 | Msa0808020 | 0.833660 | 4.694907e-56 | -8.615850e-47 |
| Msa0384890 | Msa0810220 | 0.818271 | 2.138591e-52 | -8.615850e-47 |
| Msa0384890 | Msa0811270 | 0.811864 | 5.655734e-51 | -8.615850e-47 |
| Msa0384890 | Msa0813400 | 0.815187 | 1.050937e-51 | -8.615850e-47 |
| Msa0384890 | Msa0820850 | 0.814703 | 1.346117e-51 | -8.615850e-47 |
| Msa0384890 | Msa0824390 | 0.806107 | 9.659791e-50 | -8.615850e-47 |
| Msa0384890 | Msa0824590 | 0.841754 | 3.922030e-58 | -8.615850e-47 |
| Msa0384890 | Msa0824600 | 0.815968 | 7.042567e-52 | -8.615850e-47 |
| Msa0384890 | Msa0825860 | 0.834172 | 3.494469e-56 | -8.615850e-47 |
| Msa0384890 | Msa0833300 | 0.805930 | 1.052473e-49 | -8.615850e-47 |
| Msa0384890 | Msa0842650 | 0.801847 | 7.420894e-49 | -8.615850e-47 |
| Msa0384890 | Msa0844490 | 0.824744 | 6.836769e-54 | -8.615850e-47 |
| Msa0384890 | Msa0845930 | 0.806140 | 9.506681e-50 | -8.615850e-47 |
| Msa0384890 | Msa0846210 | 0.845352 | 4.285293e-59 | -8.615850e-47 |
| Msa0384890 | Msa0846330 | 0.821912 | 3.137795e-53 | -8.615850e-47 |
| Msa0384890 | Msa0846350 | 0.841488 | 4.609119e-58 | -8.615850e-47 |
| Msa0384890 | Msa0848960 | 0.830046 | 3.660516e-55 | -8.615850e-47 |
| Msa0384890 | Msa0858980 | 0.883067 | 6.136965e-71 | -8.615850e-47 |
| Msa0384890 | Msa0861130 | 0.813500 | 2.480491e-51 | -8.615850e-47 |
| Msa0384890 | Msa0864070 | 0.831149 | 1.966357e-55 | -8.615850e-47 |
| Msa0384890 | Msa0865320 | 0.816778 | 4.639662e-52 | -8.615850e-47 |
| Msa0384890 | Msa0874320 | 0.806271 | 8.921434e-50 | -8.615850e-47 |
| Msa0384890 | Msa0877250 | 0.842388 | 2.666775e-58 | -8.615850e-47 |
| Msa0384890 | Msa0885280 | 0.808079 | 3.694428e-50 | -8.615850e-47 |
| Msa0384890 | Msa0888370 | 0.862160 | 6.169312e-64 | -8.615850e-47 |
| Msa0384890 | Msa0892080 | 0.800308 | 1.531459e-48 | -8.615850e-47 |
| Msa0384890 | Msa0898080 | 0.803818 | 2.906615e-49 | -8.615850e-47 |
| Msa0384890 | Msa0899430 | 0.846406 | 2.216508e-59 | -8.615850e-47 |
| Msa0384890 | Msa0899450 | 0.862415 | 5.149954e-64 | -8.615850e-47 |
| Msa0384890 | Msa0901930 | 0.810528 | 1.101971e-50 | -8.615850e-47 |
| Msa0384890 | Msa0907260 | 0.878522 | 2.623184e-69 | -8.615850e-47 |
| Msa0384890 | Msa0914760 | 0.826470 | 2.665454e-54 | -8.615850e-47 |
| Msa0384890 | Msa0924050 | 0.802641 | 5.094820e-49 | -8.615850e-47 |
| Msa0384890 | Msa0925250 | 0.805020 | 1.632592e-49 | -8.615850e-47 |
| Msa0384890 | Msa0925290 | 0.809648 | 1.705913e-50 | -8.615850e-47 |
| Msa0384890 | Msa0927380 | 0.830275 | 3.219542e-55 | -8.615850e-47 |
| Msa0384890 | Msa0931520 | 0.806409 | 8.343329e-50 | -8.615850e-47 |
| Msa0384890 | Msa0935910 | 0.817355 | 3.442729e-52 | -8.615850e-47 |
| Msa0384890 | Msa0952350 | 0.805804 | 1.118540e-49 | -8.615850e-47 |
| Msa0384890 | Msa0952720 | 0.808001 | 3.837639e-50 | -8.615850e-47 |
| Msa0384890 | Msa0953120 | 0.835594 | 1.531904e-56 | -8.615850e-47 |
| Msa0384890 | Msa0954910 | 0.833956 | 3.957594e-56 | -8.615850e-47 |
| Msa0384890 | Msa0956270 | 0.863574 | 2.259078e-64 | -8.615850e-47 |
| Msa0384890 | Msa0958550 | 0.855089 | 7.971843e-62 | -8.615850e-47 |
| Msa0384890 | Msa0964900 | 0.840217 | 9.930385e-58 | -8.615850e-47 |
| Msa0384890 | Msa0967280 | 0.807375 | 5.213748e-50 | -8.615850e-47 |
| Msa0384890 | Msa0974080 | 0.806632 | 7.485761e-50 | -8.615850e-47 |
| Msa0384890 | Msa0976670 | 0.804253 | 2.360227e-49 | -8.615850e-47 |
| Msa0384890 | Msa0979410 | 0.803887 | 2.812255e-49 | -8.615850e-47 |
| Msa0384890 | Msa0981370 | 0.834970 | 2.202620e-56 | -8.615850e-47 |
| Msa0384890 | Msa0985560 | 0.805250 | 1.461419e-49 | -8.615850e-47 |
| Msa0384890 | Msa0989060 | 0.831668 | 1.464729e-55 | -8.615850e-47 |
| Msa0384890 | Msa0998690 | 0.823260 | 1.524191e-53 | -8.615850e-47 |
| Msa0384890 | Msa0999220 | 0.803901 | 2.793459e-49 | -8.615850e-47 |
| Msa0384890 | Msa1002810 | 0.836274 | 1.029852e-56 | -8.615850e-47 |
| Msa0384890 | Msa1014540 | 0.820763 | 5.776965e-53 | -8.615850e-47 |
| Msa0384890 | Msa1016280 | 0.851263 | 9.947097e-61 | -8.615850e-47 |
| Msa0384890 | Msa1023050 | 0.818081 | 2.361413e-52 | -8.615850e-47 |
| Msa0384890 | Msa1023950 | 0.815252 | 1.017062e-51 | -8.615850e-47 |
| Msa0384890 | Msa1025360 | 0.842379 | 2.680608e-58 | -8.615850e-47 |
| Msa0384890 | Msa1025370 | 0.838451 | 2.852761e-57 | -8.615850e-47 |
| Msa0384890 | Msa1044830 | 0.839211 | 1.814870e-57 | -8.615850e-47 |
| Msa0384890 | Msa1044840 | 0.844008 | 9.861419e-59 | -8.615850e-47 |
| Msa0384890 | Msa1052330 | 0.820588 | 6.335640e-53 | -8.615850e-47 |
| Msa0384890 | Msa1057920 | 0.802602 | 5.188828e-49 | -8.615850e-47 |
| Msa0384890 | Msa1065570 | 0.821298 | 4.349174e-53 | -8.615850e-47 |
| Msa0384890 | Msa1068420 | 0.806801 | 6.896616e-50 | -8.615850e-47 |
| Msa0384890 | Msa1085740 | 0.817411 | 3.343598e-52 | -8.615850e-47 |
| Msa0384890 | Msa1091900 | 0.804305 | 2.302893e-49 | -8.615850e-47 |
| Msa0384890 | Msa1092990 | 0.830059 | 3.633834e-55 | -8.615850e-47 |
| Msa0384890 | Msa1100980 | 0.849911 | 2.385308e-60 | -8.615850e-47 |
| Msa0384890 | Msa1109440 | 0.806231 | 9.094352e-50 | -8.615850e-47 |
| Msa0384890 | Msa1110090 | 0.807378 | 5.205337e-50 | -8.615850e-47 |
| Msa0384890 | Msa1111150 | 0.806307 | 8.764601e-50 | -8.615850e-47 |
| Msa0384890 | Msa1114030 | 0.862325 | 5.489155e-64 | -8.615850e-47 |
| Msa0384890 | Msa1117150 | 0.812136 | 4.933580e-51 | -8.615850e-47 |
| Msa0384890 | Msa1120610 | 0.830433 | 2.945117e-55 | -8.615850e-47 |
| Msa0384890 | Msa1121200 | 0.836246 | 1.047383e-56 | -8.615850e-47 |
| Msa0384890 | Msa1121480 | 0.817947 | 2.531088e-52 | -8.615850e-47 |
| Msa0384890 | Msa1121490 | 0.823485 | 1.350151e-53 | -8.615850e-47 |
| Msa0384890 | Msa1135740 | 0.827273 | 1.713870e-54 | -8.615850e-47 |
| Msa0384890 | Msa1136090 | 0.816959 | 4.225732e-52 | -8.615850e-47 |
| Msa0384890 | Msa1137570 | 0.808375 | 3.194420e-50 | -8.615850e-47 |
| Msa0384890 | Msa1137690 | 0.840539 | 8.181452e-58 | -8.615850e-47 |
| Msa0384890 | Msa1139680 | 0.806991 | 6.286227e-50 | -8.615850e-47 |
| Msa0384890 | Msa1146110 | 0.805106 | 1.566608e-49 | -8.615850e-47 |
| Msa0384890 | Msa1162550 | -0.802196 | 6.292240e-49 | -8.615850e-47 |
| Msa0384890 | Msa1181870 | 0.803101 | 4.093796e-49 | -8.615850e-47 |
| Msa0384890 | Msa1184420 | 0.831544 | 1.571901e-55 | -8.615850e-47 |
| Msa0384890 | Msa1185110 | 0.831723 | 1.419717e-55 | -8.615850e-47 |
| Msa0384890 | Msa1187940 | 0.818846 | 1.583869e-52 | -8.615850e-47 |
| Msa0384890 | Msa1187950 | 0.829645 | 4.584775e-55 | -8.615850e-47 |
| Msa0384890 | Msa1192640 | 0.818081 | 2.361025e-52 | -8.615850e-47 |
| Msa0384890 | Msa1195190 | 0.809476 | 1.857259e-50 | -8.615850e-47 |
| Msa0384890 | Msa1230430 | 0.830718 | 2.508639e-55 | -8.615850e-47 |
| Msa0384890 | Msa1246880 | 0.808092 | 3.671111e-50 | -8.615850e-47 |
| Msa0384890 | Msa1248310 | 0.807353 | 5.268545e-50 | -8.615850e-47 |
| Msa0384890 | Msa1249490 | 0.815508 | 8.917726e-52 | -8.615850e-47 |
| Msa0384890 | Msa1253000 | 0.824474 | 7.913509e-54 | -8.615850e-47 |
| Msa0384890 | Msa1269670 | 0.820628 | 6.205163e-53 | -8.615850e-47 |
| Msa0384890 | Msa1270230 | 0.822828 | 1.922609e-53 | -8.615850e-47 |
| Msa0384890 | Msa1270240 | 0.833644 | 4.738136e-56 | -8.615850e-47 |
| Msa0384890 | Msa1270270 | 0.808737 | 2.674101e-50 | -8.615850e-47 |
| Msa0384890 | Msa1277660 | 0.810651 | 1.036849e-50 | -8.615850e-47 |
| Msa0384890 | Msa1283330 | 0.843579 | 1.284914e-58 | -8.615850e-47 |
| Msa0384890 | Msa1284680 | 0.826444 | 2.703993e-54 | -8.615850e-47 |
| Msa0384890 | Msa1285930 | 0.826833 | 2.184179e-54 | -8.615850e-47 |
| Msa0384890 | Msa1287800 | 0.819570 | 1.083641e-52 | -8.615850e-47 |
| Msa0384890 | Msa1287810 | 0.829358 | 5.383813e-55 | -8.615850e-47 |
| Msa0384890 | Msa1288560 | 0.806963 | 6.372256e-50 | -8.615850e-47 |
| Msa0384890 | Msa1289430 | 0.826854 | 2.159015e-54 | -8.615850e-47 |
| Msa0384890 | Msa1297210 | 0.808574 | 2.896613e-50 | -8.615850e-47 |
| Msa0384890 | Msa1307890 | 0.841078 | 5.908207e-58 | -8.615850e-47 |
| Msa0384890 | Msa1320300 | 0.818976 | 1.479613e-52 | -8.615850e-47 |
| Msa0384890 | Msa1340590 | 0.838165 | 3.381637e-57 | -8.615850e-47 |
| Msa0384890 | Msa1344520 | 0.820243 | 7.601106e-53 | -8.615850e-47 |
| Msa0384890 | Msa1366810 | 0.802656 | 5.057903e-49 | -8.615850e-47 |
| Msa0384890 | Msa1370210 | 0.800040 | 1.736255e-48 | -8.615850e-47 |
| Msa0384890 | Msa1373030 | 0.804539 | 2.057551e-49 | -8.615850e-47 |
| Msa0384890 | Msa1382690 | 0.819773 | 9.741147e-53 | -8.615850e-47 |
| Msa0384890 | Msa1397580 | 0.843968 | 1.010749e-58 | -8.615850e-47 |
| Msa0384890 | Msa1397860 | 0.823103 | 1.658756e-53 | -8.615850e-47 |
| Msa0384890 | Msa1402790 | 0.828302 | 9.695549e-55 | -8.615850e-47 |
| Msa0384890 | Msa1403480 | 0.808480 | 3.033433e-50 | -8.615850e-47 |
| Msa0384890 | Msa1404000 | 0.840451 | 8.629314e-58 | -8.615850e-47 |
| Msa0384890 | Msa1410680 | 0.809616 | 1.732902e-50 | -8.615850e-47 |
| Msa0384890 | Msa1415310 | 0.818140 | 2.289983e-52 | -8.615850e-47 |
| Msa0384890 | Msa1422180 | 0.827182 | 1.801349e-54 | -8.615850e-47 |
| Msa0384890 | Msa1427230 | 0.800034 | 1.741229e-48 | -8.615850e-47 |
| Msa0384890 | Msa1433120 | 0.837029 | 6.613784e-57 | -8.615850e-47 |
| Msa0384890 | Msa1443060 | 0.801621 | 8.260725e-49 | -8.615850e-47 |
| Msa0384890 | Msa1451570 | 0.828466 | 8.850280e-55 | -8.615850e-47 |
| Msa0384890 | Msa1451620 | -0.816360 | 5.755640e-52 | -8.615850e-47 |
| Msa0384890 | Msa1460830 | 0.804501 | 2.095758e-49 | -8.615850e-47 |
| Msa0251320 | Msa0384890 | 0.837223 | 5.900559e-57 | -8.615850e-47 |
| Msa0267000 | Msa0384890 | 0.832273 | 1.038639e-55 | -8.615850e-47 |
| Msa0267010 | Msa0384890 | 0.836220 | 1.063401e-56 | -8.615850e-47 |
| Msa0270520 | Msa0384890 | 0.838967 | 2.098809e-57 | -8.615850e-47 |
| Msa0285450 | Msa0384890 | 0.813855 | 2.072370e-51 | -8.615850e-47 |
| Msa0288100 | Msa0384890 | 0.814595 | 1.422005e-51 | -8.615850e-47 |
| Msa0290870 | Msa0384890 | 0.827832 | 1.258194e-54 | -8.615850e-47 |
| Msa0305190 | Msa0384890 | 0.812073 | 5.091846e-51 | -8.615850e-47 |
| Msa0309020 | Msa0384890 | 0.800956 | 1.130138e-48 | -8.615850e-47 |
| Msa0330340 | Msa0384890 | 0.800224 | 1.593036e-48 | -8.615850e-47 |
| Msa0337900 | Msa0384890 | 0.815616 | 8.438623e-52 | -8.615850e-47 |
| Msa0355220 | Msa0384890 | 0.817832 | 2.686952e-52 | -8.615850e-47 |
| Msa0360510 | Msa0384890 | 0.835130 | 2.007386e-56 | -8.615850e-47 |
| Msa0363300 | Msa0384890 | 0.817570 | 3.078773e-52 | -8.615850e-47 |
| Msa0363530 | Msa0384890 | 0.800328 | 1.517585e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384890 | MtrunA17_Chr3g0142161 | 85.180 | 722 | 61 | 5 | 1 | 692 | 1 | 706 | 0.0 | 1201 |
| Msa0384890 | MtrunA17_Chr4g0035561 | 66.337 | 808 | 239 | 5 | 1 | 778 | 14 | 818 | 0.0 | 1080 |
| Msa0384890 | MtrunA17_Chr2g0325991 | 56.877 | 807 | 318 | 5 | 1 | 778 | 11 | 816 | 0.0 | 931 |
| Msa0384890 | MtrunA17_Chr4g0030121 | 57.108 | 809 | 315 | 6 | 1 | 778 | 11 | 818 | 0.0 | 927 |
| Msa0384890 | MtrunA17_Chr3g0142151 | 93.333 | 90 | 6 | 0 | 692 | 781 | 2 | 91 | 3.53e-42 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384890 | AT2G21410.1 | 66.005 | 806 | 245 | 4 | 1 | 778 | 15 | 819 | 0.0 | 1076 |
| Msa0384890 | AT4G39080.1 | 66.378 | 809 | 240 | 6 | 1 | 778 | 14 | 821 | 0.0 | 1075 |
| Msa0384890 | AT2G28520.1 | 57.019 | 805 | 314 | 6 | 1 | 773 | 11 | 815 | 0.0 | 917 |
Find 141 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTTCCTATCTTCGTTTA+TGG | 0.080046 | 3_1:-88314742 | Msa0384890:CDS |
| TCCATTCCGTTTGAACTATT+TGG | 0.108443 | 3_1:-88315775 | Msa0384890:CDS |
| GCGTAAGTTGCGTTTATTTA+AGG | 0.157306 | 3_1:-88318038 | Msa0384890:CDS |
| TTCTATTGATCTAGAAAATT+TGG | 0.182048 | 3_1:-88317963 | Msa0384890:CDS |
| GTATTCTTGAACAGCCTATT+TGG | 0.197201 | 3_1:-88315327 | Msa0384890:CDS |
| TTCAGTAAAGCAGATAAAAT+TGG | 0.203541 | 3_1:-88317436 | Msa0384890:CDS |
| CACTCCTCATAATTGTAAAA+TGG | 0.223248 | 3_1:-88315296 | Msa0384890:CDS |
| TTAAGGGATGTAAATGAAAA+TGG | 0.233682 | 3_1:+88314218 | None:intergenic |
| CGCTGTAATGTTTGGTGATT+GGG | 0.234878 | 3_1:-88316057 | Msa0384890:CDS |
| GGCTGTTCAAGAATACAATT+TGG | 0.237322 | 3_1:+88315334 | None:intergenic |
| TATTGACTGTCCATTATTAA+TGG | 0.242494 | 3_1:-88317562 | Msa0384890:CDS |
| CATATTTAGAATGTGATAAA+TGG | 0.248964 | 3_1:+88316654 | None:intergenic |
| TCATGGCATATGCTTATTAT+TGG | 0.252181 | 3_1:-88316033 | Msa0384890:CDS |
| AATGAAGATGTCAATTCTAT+TGG | 0.256189 | 3_1:-88315533 | Msa0384890:CDS |
| TTCTTACTTGAAAGAACTTT+TGG | 0.258014 | 3_1:+88315181 | None:intergenic |
| TCTAAGTCCAACAGATGATT+TGG | 0.275930 | 3_1:-88315226 | Msa0384890:CDS |
| CTCCCTTATAAAACTTGTTC+TGG | 0.278783 | 3_1:+88314258 | None:intergenic |
| ATACATCTTTGAACTGAAAA+AGG | 0.292712 | 3_1:+88318521 | None:intergenic |
| ATTTAAGGAGCAAATGAAAA+AGG | 0.304205 | 3_1:-88318023 | Msa0384890:CDS |
| AGCAATTTGTTGCAAACAAT+TGG | 0.307815 | 3_1:-88316880 | Msa0384890:CDS |
| TTATAACCGGTCTTGTTACT+AGG | 0.312976 | 3_1:-88317410 | Msa0384890:CDS |
| ATACAATTTGGGGAACAAAT+TGG | 0.314145 | 3_1:+88315346 | None:intergenic |
| CTCCGTGTGCCATGCCATTT+AGG | 0.315514 | 3_1:+88315583 | None:intergenic |
| AGCTTCCTATCTTCGTTTAT+GGG | 0.320291 | 3_1:-88314741 | Msa0384890:CDS |
| TCAGTAAAGCAGATAAAATT+GGG | 0.320724 | 3_1:-88317435 | Msa0384890:CDS |
| CAAGAAATTGTAGACGCATA+TGG | 0.321767 | 3_1:-88316339 | Msa0384890:CDS |
| CATTTGGCGTAGATCCTAAA+TGG | 0.329997 | 3_1:-88315597 | Msa0384890:CDS |
| CTTTAATTCTACAATTCTTT+CGG | 0.330426 | 3_1:+88316933 | None:intergenic |
| ACACACCAGGATTTGCTTCC+TGG | 0.331410 | 3_1:+88316108 | None:intergenic |
| TCGCTGTAATGTTTGGTGAT+TGG | 0.333056 | 3_1:-88316058 | Msa0384890:CDS |
| ATTTGAGCAGTGGAATCTTC+TGG | 0.337268 | 3_1:-88316851 | Msa0384890:intron |
| CTAATTACCTATATTGCTTC+AGG | 0.338704 | 3_1:-88315371 | Msa0384890:CDS |
| AACACCATTGTTCTCATTGT+TGG | 0.347282 | 3_1:-88314377 | Msa0384890:CDS |
| GCTGTTCAAGAATACAATTT+GGG | 0.359364 | 3_1:+88315335 | None:intergenic |
| ACAGTCCACCCTCGTCATTA+AGG | 0.360706 | 3_1:+88314201 | None:intergenic |
| TATACATGTTCCATTAATAA+TGG | 0.365815 | 3_1:+88317552 | None:intergenic |
| AGGATTTGCTTCCTGGTACT+TGG | 0.373271 | 3_1:+88316115 | None:intergenic |
| ATTGGTGCCTGAAGCAATAT+AGG | 0.383628 | 3_1:+88315364 | None:intergenic |
| TTCAGGGATGCTACTACAAT+AGG | 0.384365 | 3_1:-88315646 | Msa0384890:intron |
| TCAAGTAGAGGCAATAGTTC+AGG | 0.392420 | 3_1:-88316424 | Msa0384890:CDS |
| ATCTCTTACCTTGGCGATCT+AGG | 0.395353 | 3_1:-88318544 | Msa0384890:CDS |
| ATAAAATTGGGGTTTATAAC+CGG | 0.396630 | 3_1:-88317423 | Msa0384890:CDS |
| CTAAGTCCAACAGATGATTT+GGG | 0.404472 | 3_1:-88315225 | Msa0384890:CDS |
| TCTCTCGTTGACCATGTTGA+TGG | 0.411005 | 3_1:+88317989 | None:intergenic |
| TGCATGCTTTGAGACTTCAT+TGG | 0.411142 | 3_1:-88314289 | Msa0384890:CDS |
| ATCAAATAGGTTAAAAGATG+TGG | 0.412168 | 3_1:-88318070 | Msa0384890:intron |
| GGTGAAAACCAGCTCTTTGT+TGG | 0.412927 | 3_1:-88315204 | Msa0384890:CDS |
| AAGAAATGTCTCTATGTAGA+AGG | 0.413613 | 3_1:-88316613 | Msa0384890:CDS |
| ATGAAGATGTCAATTCTATT+GGG | 0.414653 | 3_1:-88315532 | Msa0384890:CDS |
| TTAGGTTATATTACTATTGT+TGG | 0.418965 | 3_1:-88315078 | Msa0384890:intron |
| GCATGCTTTGAGACTTCATT+GGG | 0.419031 | 3_1:-88314288 | Msa0384890:CDS |
| GGAGTGAAAGATAGCCAAAT+AGG | 0.420903 | 3_1:+88315313 | None:intergenic |
| GAATTCTATTTCGTGCTACT+AGG | 0.420984 | 3_1:-88317365 | Msa0384890:CDS |
| AAGAAATTGTAGACGCATAT+GGG | 0.426376 | 3_1:-88316338 | Msa0384890:intron |
| ATTCTATTGTATGTATAAGT+TGG | 0.428985 | 3_1:+88314789 | None:intergenic |
| ACTTGGAGACATATTAGAAA+TGG | 0.433033 | 3_1:-88315875 | Msa0384890:CDS |
| ATTGATCATTCCAATTGAAT+CGG | 0.434902 | 3_1:-88318578 | Msa0384890:CDS |
| GATCGATGAGCCGATTCAAT+TGG | 0.436497 | 3_1:+88318568 | None:intergenic |
| ATGTTGTTTCTTCAAGAGAA+AGG | 0.437840 | 3_1:+88315019 | None:intergenic |
| TAAGGGATGTAAATGAAAAT+GGG | 0.437892 | 3_1:+88314219 | None:intergenic |
| TCAATAGACCCTTCAAAAGT+TGG | 0.440735 | 3_1:+88317579 | None:intergenic |
| CAGTCCACCCTCGTCATTAA+GGG | 0.442180 | 3_1:+88314202 | None:intergenic |
| GTGCGCGACACTTATCCATT+TGG | 0.445671 | 3_1:-88315613 | Msa0384890:CDS |
| AATTCTATTTCGTGCTACTA+GGG | 0.446400 | 3_1:-88317364 | Msa0384890:CDS |
| TCAAATAGGTTAAAAGATGT+GGG | 0.447595 | 3_1:-88318069 | Msa0384890:intron |
| GTTGAACTTCAAGCTCTCTC+TGG | 0.448824 | 3_1:+88317601 | None:intergenic |
| CCTACTCTTTGATCTACAAT+GGG | 0.450668 | 3_1:-88314889 | Msa0384890:CDS |
| CATGTTCTAGATCCTTTGTC+AGG | 0.453259 | 3_1:-88317306 | Msa0384890:CDS |
| TAACTTTAATTAGTTGAATG+TGG | 0.460387 | 3_1:-88315418 | Msa0384890:intron |
| AACTTCAAGCTCTCTCTGGC+GGG | 0.460694 | 3_1:+88317605 | None:intergenic |
| TTCTTCAAGAGAAAGGGCTT+TGG | 0.461252 | 3_1:+88315026 | None:intergenic |
| GAGGGCCCATAAACGAAGAT+AGG | 0.461762 | 3_1:+88314736 | None:intergenic |
| TTAAAGACAACCATTGATGT+AGG | 0.463823 | 3_1:-88316916 | Msa0384890:CDS |
| TGTTGTTAATTGCAGAAACT+TGG | 0.465763 | 3_1:-88315892 | Msa0384890:intron |
| ATCTTCGTTTATGGGCCCTC+AGG | 0.469823 | 3_1:-88314733 | Msa0384890:intron |
| GGATGCTACTACAATAGGTT+TGG | 0.469912 | 3_1:-88315641 | Msa0384890:CDS |
| ATGTTTGGTGATTGGGGTCA+TGG | 0.475527 | 3_1:-88316050 | Msa0384890:CDS |
| CATTTAGGATCTACGCCAAA+TGG | 0.477514 | 3_1:+88315598 | None:intergenic |
| CGCTGAAATCAAACTCCTCA+TGG | 0.478028 | 3_1:+88314825 | None:intergenic |
| TGTTGGTGTATTACTAGTAA+TGG | 0.480481 | 3_1:-88314330 | Msa0384890:CDS |
| CACCAAACATTACAGCGAAA+AGG | 0.483279 | 3_1:+88316063 | None:intergenic |
| TGTTGTTTCTTCAAGAGAAA+GGG | 0.483549 | 3_1:+88315020 | None:intergenic |
| CATCGATCCATCTCTTACCT+TGG | 0.485763 | 3_1:-88318553 | Msa0384890:CDS |
| AAGCTCTCTCTGGCGGGTTG+CGG | 0.488042 | 3_1:+88317611 | None:intergenic |
| CTATTTGGACAATCTGCCTA+TGG | 0.489161 | 3_1:-88315760 | Msa0384890:CDS |
| GAAGCATAGGTCTGTTGGAA+TGG | 0.489379 | 3_1:+88318327 | None:intergenic |
| TCCAAATAGTTCAAACGGAA+TGG | 0.495363 | 3_1:+88315774 | None:intergenic |
| TGAATTAATCTCAATTAGCT+CGG | 0.496624 | 3_1:+88317829 | None:intergenic |
| GATTGTCCAAATAGTTCAAA+CGG | 0.500166 | 3_1:+88315769 | None:intergenic |
| AGATCCTTTGTCAGGAGAGA+AGG | 0.502764 | 3_1:-88317298 | Msa0384890:CDS |
| CCTGTGAAGCATAGGTCTGT+TGG | 0.509382 | 3_1:+88318322 | None:intergenic |
| GAGATATATTATTATGATGA+TGG | 0.510661 | 3_1:-88315842 | Msa0384890:CDS |
| GAACTTCAAGCTCTCTCTGG+CGG | 0.513046 | 3_1:+88317604 | None:intergenic |
| TATTGATCTAGAAAATTTGG+AGG | 0.515471 | 3_1:-88317960 | Msa0384890:intron |
| TATAACCGGTCTTGTTACTA+GGG | 0.516391 | 3_1:-88317409 | Msa0384890:CDS |
| TGTAGGATCGCGACATCCAT+AGG | 0.523119 | 3_1:+88315744 | None:intergenic |
| AAGTACCAGGAAGCAAATCC+TGG | 0.525177 | 3_1:-88316113 | Msa0384890:CDS |
| AATGTCTCTATGTAGAAGGC+TGG | 0.525925 | 3_1:-88316609 | Msa0384890:CDS |
| TCCTACTCTTTGATCTACAA+TGG | 0.526141 | 3_1:-88314890 | Msa0384890:CDS |
| CCAACAGACCTATGCTTCAC+AGG | 0.533446 | 3_1:-88318322 | Msa0384890:intron |
| ATAATTGTAAAATGGTGCAC+TGG | 0.535769 | 3_1:-88315288 | Msa0384890:CDS |
| CGAAATAGAATTCTTTCGAA+AGG | 0.537677 | 3_1:+88317375 | None:intergenic |
| CATACAATAGAATTTGTGCT+TGG | 0.540924 | 3_1:-88314779 | Msa0384890:CDS |
| TTGTGAATACCACGTGACTC+TGG | 0.541621 | 3_1:+88314851 | None:intergenic |
| AAGCATAGGTCTGTTGGAAT+GGG | 0.545226 | 3_1:+88318328 | None:intergenic |
| ATGATGCAAACCTACATCAA+TGG | 0.557963 | 3_1:+88316906 | None:intergenic |
| TGACAGAATTGCCAAGTACC+AGG | 0.558993 | 3_1:-88316126 | Msa0384890:intron |
| TTGGATATCAATTTGAGCAG+TGG | 0.566788 | 3_1:-88316861 | Msa0384890:CDS |
| TGGCACTCATTTCAGTACCA+TGG | 0.568747 | 3_1:-88315058 | Msa0384890:CDS |
| TATAGGTACCTGTGAAGCAT+AGG | 0.569643 | 3_1:+88318314 | None:intergenic |
| AGTATTGATGCGAGCAACCG+TGG | 0.569989 | 3_1:-88316457 | Msa0384890:CDS |
| ATCAATTGAACAAGTTGCAT+AGG | 0.570855 | 3_1:+88318595 | None:intergenic |
| AACATTACAGCGAAAAGGAA+AGG | 0.574650 | 3_1:+88316068 | None:intergenic |
| TATTTCCCTAGTAACAAGAC+CGG | 0.579068 | 3_1:+88317404 | None:intergenic |
| TACTTGAGAGTTACAGTCCA+CGG | 0.579726 | 3_1:+88316440 | None:intergenic |
| GGCTTTGGTAATAACATCCA+TGG | 0.580963 | 3_1:+88315041 | None:intergenic |
| TCAACATGGTCAACGAGAGA+TGG | 0.582556 | 3_1:-88317986 | Msa0384890:CDS |
| ATTCTATTTCGTGCTACTAG+GGG | 0.585573 | 3_1:-88317363 | Msa0384890:CDS |
| ATCCTAAATGGCATGGCACA+CGG | 0.589895 | 3_1:-88315585 | Msa0384890:CDS |
| TAGATCGCCAAGGTAAGAGA+TGG | 0.589934 | 3_1:+88318546 | None:intergenic |
| AAAATGGTGCACTGGATCAC+AGG | 0.590090 | 3_1:-88315280 | Msa0384890:CDS |
| CCACGTGACTCTGGTTCAAG+AGG | 0.590260 | 3_1:+88314860 | None:intergenic |
| GGCGTAGATCCTAAATGGCA+TGG | 0.594393 | 3_1:-88315592 | Msa0384890:CDS |
| AATCAAAACCACCTGCATGT+AGG | 0.594477 | 3_1:+88315727 | None:intergenic |
| TTTACATCCCTTAATGACGA+GGG | 0.601108 | 3_1:-88314209 | Msa0384890:CDS |
| CAGTAAAGCAGATAAAATTG+GGG | 0.611660 | 3_1:-88317434 | Msa0384890:CDS |
| GATGTCGCGATCCTACATGC+AGG | 0.623019 | 3_1:-88315738 | Msa0384890:intron |
| GTAACCTTCTCTCCTGACAA+AGG | 0.627927 | 3_1:+88317294 | None:intergenic |
| ATTTACATCCCTTAATGACG+AGG | 0.635939 | 3_1:-88314210 | Msa0384890:CDS |
| CAAATATATCTCCATCAACA+TGG | 0.637172 | 3_1:-88318000 | Msa0384890:CDS |
| CAAATAGGTTAAAAGATGTG+GGG | 0.638472 | 3_1:-88318068 | Msa0384890:intron |
| GCTGTAATGTTTGGTGATTG+GGG | 0.649165 | 3_1:-88316056 | Msa0384890:CDS |
| CCCATTGTAGATCAAAGAGT+AGG | 0.649812 | 3_1:+88314889 | None:intergenic |
| GTGATGATTGTGTACACACC+AGG | 0.653396 | 3_1:+88316095 | None:intergenic |
| GGACTGTAACTCTCAAGTAG+AGG | 0.654482 | 3_1:-88316436 | Msa0384890:CDS |
| ACATCCCTTAATGACGAGGG+TGG | 0.661040 | 3_1:-88314206 | Msa0384890:CDS |
| CTGTTCAAGAATACAATTTG+GGG | 0.666631 | 3_1:+88315336 | None:intergenic |
| AATGCCAACAATGAGAACAA+TGG | 0.667477 | 3_1:+88314373 | None:intergenic |
| CCTCTTGAACCAGAGTCACG+TGG | 0.672253 | 3_1:-88314860 | Msa0384890:CDS |
| TGAGGAGTTTGATTTCAGCG+AGG | 0.723862 | 3_1:-88314822 | Msa0384890:CDS |
| CTACTCTTTGATCTACAATG+GGG | 0.740978 | 3_1:-88314888 | Msa0384890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTTATTATATTTTATTC+GGG | - | chr3_1:88315623-88315642 | Msa0384890:CDS | 10.0% |
| !!! | TTTTAACCTATTTGATAAAA+CGG | + | chr3_1:88314741-88314760 | None:intergenic | 15.0% |
| !! | TAAAATGGTAAAAACAAATA+AGG | + | chr3_1:88315149-88315168 | None:intergenic | 15.0% |
| !!! | TTATTTGTTTTTACCATTTT+AGG | - | chr3_1:88315148-88315167 | Msa0384890:intron | 15.0% |
| !!! | AAATAAACTACAAAGTTTTA+GGG | + | chr3_1:88315289-88315308 | None:intergenic | 15.0% |
| !!! | AAAATAAACTACAAAGTTTT+AGG | + | chr3_1:88315290-88315309 | None:intergenic | 15.0% |
| !! | AAAATTTAATTCACATTTCA+AGG | + | chr3_1:88316262-88316281 | None:intergenic | 15.0% |
| !!! | ATTCCTTTAGTTTTAAATTA+TGG | - | chr3_1:88316556-88316575 | Msa0384890:intron | 15.0% |
| !!! | AAACCATAATTTAAAACTAA+AGG | + | chr3_1:88316562-88316581 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAATTATGGTTTA+TGG | - | chr3_1:88316563-88316582 | Msa0384890:intron | 15.0% |
| !!! | ATCAATGAAAAAAAGTTTTA+TGG | - | chr3_1:88316822-88316841 | Msa0384890:intron | 15.0% |
| !!! | CTAAATATTTTCTAGTTTAT+TGG | - | chr3_1:88316879-88316898 | Msa0384890:CDS | 15.0% |
| !!! | ATATTTATTATCCTTTTTTC+AGG | - | chr3_1:88317152-88317171 | Msa0384890:intron | 15.0% |
| !!! | TATTTATTATCCTTTTTTCA+GGG | - | chr3_1:88317153-88317172 | Msa0384890:intron | 15.0% |
| !! | ATAAAAAAGATATAACTTCA+AGG | + | chr3_1:88318215-88318234 | None:intergenic | 15.0% |
| !!! | AAAGAAGCATTTAATTGTTT+TGG | + | chr3_1:88314598-88314617 | None:intergenic | 20.0% |
| !! | TTCTATTGATCTAGAAAATT+TGG | - | chr3_1:88314852-88314871 | Msa0384890:CDS | 20.0% |
| !!! | AATTTTCATATCTTTTCTAC+CGG | - | chr3_1:88314895-88314914 | Msa0384890:CDS | 20.0% |
| !! | TATACATGTTCCATTAATAA+TGG | + | chr3_1:88315266-88315285 | None:intergenic | 20.0% |
| !! | CTTTAATTCTACAATTCTTT+CGG | + | chr3_1:88315885-88315904 | None:intergenic | 20.0% |
| !! | ATATAGTTATAAACTATGCA+TGG | + | chr3_1:88316036-88316055 | None:intergenic | 20.0% |
| !!! | CATATTTAGAATGTGATAAA+TGG | + | chr3_1:88316164-88316183 | None:intergenic | 20.0% |
| !! | AAAAATGTTAGTGCAAAAAT+AGG | + | chr3_1:88316444-88316463 | None:intergenic | 20.0% |
| !! | AAAAAATGGCATGAAAAATT+TGG | + | chr3_1:88316523-88316542 | None:intergenic | 20.0% |
| !!! | ACATATTAGAAATGGTTTTT+GGG | - | chr3_1:88316948-88316967 | Msa0384890:intron | 20.0% |
| !! | GAGATATATTATTATGATGA+TGG | - | chr3_1:88316973-88316992 | Msa0384890:intron | 20.0% |
| !!! | TATGTTGTTTTCAAAGTATT+TGG | + | chr3_1:88317353-88317372 | None:intergenic | 20.0% |
| !! | GAAAACAACATAAACATATA+TGG | - | chr3_1:88317361-88317380 | Msa0384890:CDS | 20.0% |
| !! | TAACTTTAATTAGTTGAATG+TGG | - | chr3_1:88317397-88317416 | Msa0384890:CDS | 20.0% |
| !!! | TGTGTACTATTAAATTTGTT+AGG | - | chr3_1:88317719-88317738 | Msa0384890:intron | 20.0% |
| !! | TTAGGTTATATTACTATTGT+TGG | - | chr3_1:88317737-88317756 | Msa0384890:intron | 20.0% |
| !! | ATTCTATTGTATGTATAAGT+TGG | + | chr3_1:88318029-88318048 | None:intergenic | 20.0% |
| !! | CAAAGAAAAATATGAATGAT+AGG | + | chr3_1:88318254-88318273 | None:intergenic | 20.0% |
| !!! | CTATCATTCATATTTTTCTT+TGG | - | chr3_1:88318252-88318271 | Msa0384890:intron | 20.0% |
| !!! | TATTTTTCTTTGGTGTTTTT+TGG | - | chr3_1:88318262-88318281 | Msa0384890:intron | 20.0% |
| ! | ATTGATCATTCCAATTGAAT+CGG | - | chr3_1:88314237-88314256 | Msa0384890:CDS | 25.0% |
| ! | ATACATCTTTGAACTGAAAA+AGG | + | chr3_1:88314297-88314316 | None:intergenic | 25.0% |
| !!! | TTTTTCAGTTCAAAGATGTA+TGG | - | chr3_1:88314296-88314315 | Msa0384890:CDS | 25.0% |
| ! | ATAAAGAATACAAAGTGAGA+AGG | + | chr3_1:88314345-88314364 | None:intergenic | 25.0% |
| ! | TATGCATACATAGATGTTAT+AGG | + | chr3_1:88314521-88314540 | None:intergenic | 25.0% |
| ! | ATGCATAGTTGCATTTAAAA+AGG | - | chr3_1:88314534-88314553 | Msa0384890:intron | 25.0% |
| !!! | TGCTTCTTTTGATTTTCATT+TGG | - | chr3_1:88314609-88314628 | Msa0384890:intron | 25.0% |
| ! | CATGATATAATGATAGATCT+CGG | + | chr3_1:88314643-88314662 | None:intergenic | 25.0% |
| ! | ATCAAATAGGTTAAAAGATG+TGG | - | chr3_1:88314745-88314764 | Msa0384890:CDS | 25.0% |
| ! | TCAAATAGGTTAAAAGATGT+GGG | - | chr3_1:88314746-88314765 | Msa0384890:CDS | 25.0% |
| ! | ATTTAAGGAGCAAATGAAAA+AGG | - | chr3_1:88314792-88314811 | Msa0384890:CDS | 25.0% |
| ! | TATTGATCTAGAAAATTTGG+AGG | - | chr3_1:88314855-88314874 | Msa0384890:CDS | 25.0% |
| ! | GAAGAAAAATTGTGTTACAT+GGG | + | chr3_1:88314934-88314953 | None:intergenic | 25.0% |
| ! | TGAAGAAAAATTGTGTTACA+TGG | + | chr3_1:88314935-88314954 | None:intergenic | 25.0% |
| !! | TGTAACACAATTTTTCTTCA+TGG | - | chr3_1:88314935-88314954 | Msa0384890:intron | 25.0% |
| !! | CAATTTTTCTTCATGGATAT+AGG | - | chr3_1:88314942-88314961 | Msa0384890:intron | 25.0% |
| ! | TGAATTAATCTCAATTAGCT+CGG | + | chr3_1:88314989-88315008 | None:intergenic | 25.0% |
| ! | GTATAATTAACCATATAGCT+TGG | - | chr3_1:88315072-88315091 | Msa0384890:CDS | 25.0% |
| !!! | TTGTTTTTACCATTTTAGGT+TGG | - | chr3_1:88315152-88315171 | Msa0384890:intron | 25.0% |
| !!! | TGTTTTTACCATTTTAGGTT+GGG | - | chr3_1:88315153-88315172 | Msa0384890:intron | 25.0% |
| !! | TATTGACTGTCCATTATTAA+TGG | - | chr3_1:88315253-88315272 | Msa0384890:CDS | 25.0% |
| !!! | GCTTATAAATTTTGACTTGT+AGG | - | chr3_1:88315343-88315362 | Msa0384890:CDS | 25.0% |
| ! | TTCAGTAAAGCAGATAAAAT+TGG | - | chr3_1:88315379-88315398 | Msa0384890:CDS | 25.0% |
| ! | TCAGTAAAGCAGATAAAATT+GGG | - | chr3_1:88315380-88315399 | Msa0384890:CDS | 25.0% |
| ! | ATAAAATTGGGGTTTATAAC+CGG | - | chr3_1:88315392-88315411 | Msa0384890:CDS | 25.0% |
| !! | ATTAATCTTCTACCTTTTAC+AGG | - | chr3_1:88315589-88315608 | Msa0384890:CDS | 25.0% |
| !! | CATTTTTATGAACCTGTAAA+AGG | + | chr3_1:88315604-88315623 | None:intergenic | 25.0% |
| !! | AACAAAATTTGTGATGCTTT+TGG | - | chr3_1:88315668-88315687 | Msa0384890:intron | 25.0% |
| ! | TATTCTACATAGTATGAATG+TGG | - | chr3_1:88315811-88315830 | Msa0384890:CDS | 25.0% |
| ! | AAACCTGGAAATTTCATAAT+GGG | + | chr3_1:88315862-88315881 | None:intergenic | 25.0% |
| !! | TTTTCATCAATAGTTGCAAA+AGG | - | chr3_1:88316132-88316151 | Msa0384890:intron | 25.0% |
| ! | TGCAGAGATAATGTAAAAAA+TGG | + | chr3_1:88316537-88316556 | None:intergenic | 25.0% |
| !!! | TGAAAAAAAGTTTTATGGTC+AGG | - | chr3_1:88316827-88316846 | Msa0384890:intron | 25.0% |
| ! | ACATCAAATAAAACTACAGT+TGG | + | chr3_1:88316906-88316925 | None:intergenic | 25.0% |
| !! | GACATATTAGAAATGGTTTT+TGG | - | chr3_1:88316947-88316966 | Msa0384890:intron | 25.0% |
| !! | CATATTAGAAATGGTTTTTG+GGG | - | chr3_1:88316949-88316968 | Msa0384890:intron | 25.0% |
| !!! | ATATTAGAAATGGTTTTTGG+GGG | - | chr3_1:88316950-88316969 | Msa0384890:intron | 25.0% |
| ! | TATGATACTCGTATATAACA+TGG | + | chr3_1:88317135-88317154 | None:intergenic | 25.0% |
| !! | ATTTTAAGCGAGTTAAGAAA+TGG | + | chr3_1:88317265-88317284 | None:intergenic | 25.0% |
| ! | AATGAAGATGTCAATTCTAT+TGG | - | chr3_1:88317282-88317301 | Msa0384890:CDS | 25.0% |
| ! | ATGAAGATGTCAATTCTATT+GGG | - | chr3_1:88317283-88317302 | Msa0384890:CDS | 25.0% |
| ! | TATGATTCCAAGATTCATTT+GGG | + | chr3_1:88317314-88317333 | None:intergenic | 25.0% |
| ! | ATATGATTCCAAGATTCATT+TGG | + | chr3_1:88317315-88317334 | None:intergenic | 25.0% |
| !! | TTCTTACTTGAAAGAACTTT+TGG | + | chr3_1:88317637-88317656 | None:intergenic | 25.0% |
| ! | AATAGTACACAATTTAGATG+TGG | + | chr3_1:88317710-88317729 | None:intergenic | 25.0% |
| ! | GGTAATAAAAATTAGAGTCA+GGG | + | chr3_1:88317878-88317897 | None:intergenic | 25.0% |
| ! | AGGTAATAAAAATTAGAGTC+AGG | + | chr3_1:88317879-88317898 | None:intergenic | 25.0% |
| !!! | TTCCAGAACAAGTTTTATAA+GGG | - | chr3_1:88318555-88318574 | Msa0384890:CDS | 25.0% |
| ! | TAAGGGATGTAAATGAAAAT+GGG | + | chr3_1:88318599-88318618 | None:intergenic | 25.0% |
| ! | TTAAGGGATGTAAATGAAAA+TGG | + | chr3_1:88318600-88318619 | None:intergenic | 25.0% |
| ATCAATTGAACAAGTTGCAT+AGG | + | chr3_1:88314223-88314242 | None:intergenic | 30.0% | |
| TTGTATTCTTTATGACGCTT+CGG | - | chr3_1:88314352-88314371 | Msa0384890:CDS | 30.0% | |
| ! | ACTGATTTACTAGACTAGAT+TGG | - | chr3_1:88314707-88314726 | Msa0384890:intron | 30.0% |
| ! | AGCTTACCGTTTTATCAAAT+AGG | - | chr3_1:88314732-88314751 | Msa0384890:intron | 30.0% |
| CAAATAGGTTAAAAGATGTG+GGG | - | chr3_1:88314747-88314766 | Msa0384890:CDS | 30.0% | |
| CAAATATATCTCCATCAACA+TGG | - | chr3_1:88314815-88314834 | Msa0384890:CDS | 30.0% | |
| TCTTCTCTAACCTATATAAG+GGG | + | chr3_1:88315103-88315122 | None:intergenic | 30.0% | |
| GTCTTCTCTAACCTATATAA+GGG | + | chr3_1:88315104-88315123 | None:intergenic | 30.0% | |
| TGTCTTCTCTAACCTATATA+AGG | + | chr3_1:88315105-88315124 | None:intergenic | 30.0% | |
| !!! | GTTTTTACCATTTTAGGTTG+GGG | - | chr3_1:88315154-88315173 | Msa0384890:intron | 30.0% |
| ! | AAGTTCAACCAACTTTTGAA+GGG | - | chr3_1:88315228-88315247 | Msa0384890:CDS | 30.0% |
| CAGTAAAGCAGATAAAATTG+GGG | - | chr3_1:88315381-88315400 | Msa0384890:CDS | 30.0% | |
| CGAAATAGAATTCTTTCGAA+AGG | + | chr3_1:88315443-88315462 | None:intergenic | 30.0% | |
| ! | AATTCTATTTCGTGCTACTA+GGG | - | chr3_1:88315451-88315470 | Msa0384890:intron | 30.0% |
| GGTAGACAAAATATTATCCT+TGG | - | chr3_1:88315748-88315767 | Msa0384890:CDS | 30.0% | |
| TTTCCCATTATGAAATTTCC+AGG | - | chr3_1:88315856-88315875 | Msa0384890:CDS | 30.0% | |
| GAAACCTGGAAATTTCATAA+TGG | + | chr3_1:88315863-88315882 | None:intergenic | 30.0% | |
| TTAAAGACAACCATTGATGT+AGG | - | chr3_1:88315899-88315918 | Msa0384890:intron | 30.0% | |
| !! | AGCAATTTGTTGCAAACAAT+TGG | - | chr3_1:88315935-88315954 | Msa0384890:intron | 30.0% |
| AAGAAATGTCTCTATGTAGA+AGG | - | chr3_1:88316202-88316221 | Msa0384890:intron | 30.0% | |
| ! | CTTTTTGAATCTGCATAGAT+AGG | + | chr3_1:88316340-88316359 | None:intergenic | 30.0% |
| ATGTTAGTGCAAAAATAGGT+GGG | + | chr3_1:88316440-88316459 | None:intergenic | 30.0% | |
| AATGTTAGTGCAAAAATAGG+TGG | + | chr3_1:88316441-88316460 | None:intergenic | 30.0% | |
| AAGAAATTGTAGACGCATAT+GGG | - | chr3_1:88316477-88316496 | Msa0384890:intron | 30.0% | |
| ATTGTTGCATCTTCATGTAT+GGG | - | chr3_1:88316628-88316647 | Msa0384890:CDS | 30.0% | |
| !!! | CAGTTAATTTTTTGAGCTCT+AGG | + | chr3_1:88316661-88316680 | None:intergenic | 30.0% |
| TCATGGCATATGCTTATTAT+TGG | - | chr3_1:88316782-88316801 | Msa0384890:intron | 30.0% | |
| TGTTGTTAATTGCAGAAACT+TGG | - | chr3_1:88316923-88316942 | Msa0384890:CDS | 30.0% | |
| ACTTGGAGACATATTAGAAA+TGG | - | chr3_1:88316940-88316959 | Msa0384890:CDS | 30.0% | |
| !! | TATTAGAAATGGTTTTTGGG+GGG | - | chr3_1:88316951-88316970 | Msa0384890:intron | 30.0% |
| GATTGTCCAAATAGTTCAAA+CGG | + | chr3_1:88317049-88317068 | None:intergenic | 30.0% | |
| CTAATTACCTATATTGCTTC+AGG | - | chr3_1:88317444-88317463 | Msa0384890:CDS | 30.0% | |
| ATACAATTTGGGGAACAAAT+TGG | + | chr3_1:88317472-88317491 | None:intergenic | 30.0% | |
| CTGTTCAAGAATACAATTTG+GGG | + | chr3_1:88317482-88317501 | None:intergenic | 30.0% | |
| GCTGTTCAAGAATACAATTT+GGG | + | chr3_1:88317483-88317502 | None:intergenic | 30.0% | |
| CACTCCTCATAATTGTAAAA+TGG | - | chr3_1:88317519-88317538 | Msa0384890:intron | 30.0% | |
| ! | TGCACCATTTTACAATTATG+AGG | + | chr3_1:88317526-88317545 | None:intergenic | 30.0% |
| ATAATTGTAAAATGGTGCAC+TGG | - | chr3_1:88317527-88317546 | Msa0384890:intron | 30.0% | |
| !! | TGTTGTTTCTTCAAGAGAAA+GGG | + | chr3_1:88317798-88317817 | None:intergenic | 30.0% |
| !! | ATGTTGTTTCTTCAAGAGAA+AGG | + | chr3_1:88317799-88317818 | None:intergenic | 30.0% |
| AAATTAGAGTCAGGGTTTAA+TGG | + | chr3_1:88317870-88317889 | None:intergenic | 30.0% | |
| TTATTACCTTGATTACTCAG+AGG | - | chr3_1:88317890-88317909 | Msa0384890:intron | 30.0% | |
| CATACAATAGAATTTGTGCT+TGG | - | chr3_1:88318036-88318055 | Msa0384890:CDS | 30.0% | |
| AGGTAAGTAGTTGAAAGTTT+GGG | - | chr3_1:88318102-88318121 | Msa0384890:intron | 30.0% | |
| TGTAGATGCAACTAATACAT+GGG | + | chr3_1:88318153-88318172 | None:intergenic | 30.0% | |
| ATGTAGATGCAACTAATACA+TGG | + | chr3_1:88318154-88318173 | None:intergenic | 30.0% | |
| ! | GTTTTTATATGTGCAACTGT+TGG | - | chr3_1:88318468-88318487 | Msa0384890:intron | 30.0% |
| TGTTGGTGTATTACTAGTAA+TGG | - | chr3_1:88318485-88318504 | Msa0384890:intron | 30.0% | |
| !! | GTTCCAGAACAAGTTTTATA+AGG | - | chr3_1:88318554-88318573 | Msa0384890:CDS | 30.0% |
| !! | AACAAGTTTTATAAGGGAGA+TGG | - | chr3_1:88318561-88318580 | Msa0384890:CDS | 30.0% |
| ! | GGACACAGATTGGTAATTAA+AGG | + | chr3_1:88314324-88314343 | None:intergenic | 35.0% |
| GCGTAAGTTGCGTTTATTTA+AGG | - | chr3_1:88314777-88314796 | Msa0384890:CDS | 35.0% | |
| TAGAAAATTTGGAGGTTGTC+AGG | - | chr3_1:88314863-88314882 | Msa0384890:CDS | 35.0% | |
| !!! | GTACAAGCTTGTTTTAGAGA+AGG | - | chr3_1:88315050-88315069 | Msa0384890:CDS | 35.0% |
| AAAAACTCCCCAACCTAAAA+TGG | + | chr3_1:88315164-88315183 | None:intergenic | 35.0% | |
| ! | GAAGTTCAACCAACTTTTGA+AGG | - | chr3_1:88315227-88315246 | Msa0384890:CDS | 35.0% |
| TCAATAGACCCTTCAAAAGT+TGG | + | chr3_1:88315239-88315258 | None:intergenic | 35.0% | |
| AGCATCATCAACAAATGACA+TGG | + | chr3_1:88315326-88315345 | None:intergenic | 35.0% | |
| !!! | TTTTGACTTGTAGGAGACAA+CGG | - | chr3_1:88315352-88315371 | Msa0384890:CDS | 35.0% |
| !! | TTATAACCGGTCTTGTTACT+AGG | - | chr3_1:88315405-88315424 | Msa0384890:CDS | 35.0% |
| !! | TATAACCGGTCTTGTTACTA+GGG | - | chr3_1:88315406-88315425 | Msa0384890:CDS | 35.0% |
| TATTTCCCTAGTAACAAGAC+CGG | + | chr3_1:88315414-88315433 | None:intergenic | 35.0% | |
| ! | GAATTCTATTTCGTGCTACT+AGG | - | chr3_1:88315450-88315469 | Msa0384890:intron | 35.0% |
| ! | ATTCTATTTCGTGCTACTAG+GGG | - | chr3_1:88315452-88315471 | Msa0384890:intron | 35.0% |
| TTACTCAAGTCATCTGAGAA+GGG | + | chr3_1:88315707-88315726 | None:intergenic | 35.0% | |
| TTTACTCAAGTCATCTGAGA+AGG | + | chr3_1:88315708-88315727 | None:intergenic | 35.0% | |
| ACAATTTCAGATGATGACAG+AGG | - | chr3_1:88315727-88315746 | Msa0384890:intron | 35.0% | |
| ATGATGCAAACCTACATCAA+TGG | + | chr3_1:88315912-88315931 | None:intergenic | 35.0% | |
| TTGGATATCAATTTGAGCAG+TGG | - | chr3_1:88315954-88315973 | Msa0384890:intron | 35.0% | |
| TCACATTTCAAGGAAAAACC+TGG | + | chr3_1:88316252-88316271 | None:intergenic | 35.0% | |
| CAAGAAATTGTAGACGCATA+TGG | - | chr3_1:88316476-88316495 | Msa0384890:intron | 35.0% | |
| CATTGTTGCATCTTCATGTA+TGG | - | chr3_1:88316627-88316646 | Msa0384890:CDS | 35.0% | |
| AACATTACAGCGAAAAGGAA+AGG | + | chr3_1:88316750-88316769 | None:intergenic | 35.0% | |
| ! | TTCCTTTTCGCTGTAATGTT+TGG | - | chr3_1:88316750-88316769 | Msa0384890:intron | 35.0% |
| ! | CACTTTTCTCAATCTACACT+GGG | - | chr3_1:88316996-88317015 | Msa0384890:intron | 35.0% |
| TCCATTCCGTTTGAACTATT+TGG | - | chr3_1:88317040-88317059 | Msa0384890:intron | 35.0% | |
| TCCAAATAGTTCAAACGGAA+TGG | + | chr3_1:88317044-88317063 | None:intergenic | 35.0% | |
| TTTACGAGTATCTGCCTATT+TGG | - | chr3_1:88317109-88317128 | Msa0384890:intron | 35.0% | |
| CGTATATAACATGGCCAAAT+AGG | + | chr3_1:88317126-88317145 | None:intergenic | 35.0% | |
| GGCTGTTCAAGAATACAATT+TGG | + | chr3_1:88317484-88317503 | None:intergenic | 35.0% | |
| GTATTCTTGAACAGCCTATT+TGG | - | chr3_1:88317488-88317507 | Msa0384890:intron | 35.0% | |
| TCTAAGTCCAACAGATGATT+TGG | - | chr3_1:88317589-88317608 | Msa0384890:CDS | 35.0% | |
| CTAAGTCCAACAGATGATTT+GGG | - | chr3_1:88317590-88317609 | Msa0384890:CDS | 35.0% | |
| ! | TTTTCACCCAAATCATCTGT+TGG | + | chr3_1:88317599-88317618 | None:intergenic | 35.0% |
| TTTATGCCTCTGAGTAATCA+AGG | + | chr3_1:88317899-88317918 | None:intergenic | 35.0% | |
| TCCTACTCTTTGATCTACAA+TGG | - | chr3_1:88317925-88317944 | Msa0384890:intron | 35.0% | |
| CCTACTCTTTGATCTACAAT+GGG | - | chr3_1:88317926-88317945 | Msa0384890:intron | 35.0% | |
| CTACTCTTTGATCTACAATG+GGG | - | chr3_1:88317927-88317946 | Msa0384890:intron | 35.0% | |
| TGGTATTCACAAAAACCATG+AGG | - | chr3_1:88317975-88317994 | Msa0384890:CDS | 35.0% | |
| AGCTTCCTATCTTCGTTTAT+GGG | - | chr3_1:88318074-88318093 | Msa0384890:intron | 35.0% | |
| ACTTTCAACTACTTACCTGA+GGG | + | chr3_1:88318100-88318119 | None:intergenic | 35.0% | |
| AACTTTCAACTACTTACCTG+AGG | + | chr3_1:88318101-88318120 | None:intergenic | 35.0% | |
| CAGGTAAGTAGTTGAAAGTT+TGG | - | chr3_1:88318101-88318120 | Msa0384890:intron | 35.0% | |
| TGTATTTGTGTGACTGATGT+AGG | - | chr3_1:88318409-88318428 | Msa0384890:intron | 35.0% | |
| AACACCATTGTTCTCATTGT+TGG | - | chr3_1:88318438-88318457 | Msa0384890:intron | 35.0% | |
| AATGCCAACAATGAGAACAA+TGG | + | chr3_1:88318445-88318464 | None:intergenic | 35.0% | |
| ! | CTCCCTTATAAAACTTGTTC+TGG | + | chr3_1:88318560-88318579 | None:intergenic | 35.0% |
| ATTTACATCCCTTAATGACG+AGG | - | chr3_1:88318605-88318624 | Msa0384890:CDS | 35.0% | |
| TTTACATCCCTTAATGACGA+GGG | - | chr3_1:88318606-88318625 | Msa0384890:CDS | 35.0% | |
| AAAGTGAGAAGGACACAGAT+TGG | + | chr3_1:88314334-88314353 | None:intergenic | 40.0% | |
| AAGCATAGGTCTGTTGGAAT+GGG | + | chr3_1:88314490-88314509 | None:intergenic | 40.0% | |
| TATAGGTACCTGTGAAGCAT+AGG | + | chr3_1:88314504-88314523 | None:intergenic | 40.0% | |
| ! | CTTGGTCTTTCCCCTTATAT+AGG | - | chr3_1:88315090-88315109 | Msa0384890:intron | 40.0% |
| !!! | GGGAAATGTTTTTCTGAAGC+AGG | - | chr3_1:88315472-88315491 | Msa0384890:intron | 40.0% |
| ! | CATGTTCTAGATCCTTTGTC+AGG | - | chr3_1:88315509-88315528 | Msa0384890:intron | 40.0% |
| TATCAGTTGAGCTCAATTGC+AGG | + | chr3_1:88315785-88315804 | None:intergenic | 40.0% | |
| CTACAATTCTTTCGGAAACC+TGG | + | chr3_1:88315877-88315896 | None:intergenic | 40.0% | |
| ATTTGAGCAGTGGAATCTTC+TGG | - | chr3_1:88315964-88315983 | Msa0384890:intron | 40.0% | |
| AATGTCTCTATGTAGAAGGC+TGG | - | chr3_1:88316206-88316225 | Msa0384890:intron | 40.0% | |
| TACTTGAGAGTTACAGTCCA+CGG | + | chr3_1:88316378-88316397 | None:intergenic | 40.0% | |
| TCAAGTAGAGGCAATAGTTC+AGG | - | chr3_1:88316391-88316410 | Msa0384890:CDS | 40.0% | |
| TTAGTGCAAAAATAGGTGGG+TGG | + | chr3_1:88316437-88316456 | None:intergenic | 40.0% | |
| CACCAAACATTACAGCGAAA+AGG | + | chr3_1:88316755-88316774 | None:intergenic | 40.0% | |
| ! | TCGCTGTAATGTTTGGTGAT+TGG | - | chr3_1:88316757-88316776 | Msa0384890:intron | 40.0% |
| ! | CGCTGTAATGTTTGGTGATT+GGG | - | chr3_1:88316758-88316777 | Msa0384890:intron | 40.0% |
| ! | GCTGTAATGTTTGGTGATTG+GGG | - | chr3_1:88316759-88316778 | Msa0384890:intron | 40.0% |
| ! | GCACTTTTCTCAATCTACAC+TGG | - | chr3_1:88316995-88317014 | Msa0384890:intron | 40.0% |
| CTATTTGGACAATCTGCCTA+TGG | - | chr3_1:88317055-88317074 | Msa0384890:intron | 40.0% | |
| AATCAAAACCACCTGCATGT+AGG | + | chr3_1:88317091-88317110 | None:intergenic | 40.0% | |
| GTAGTAGCATCCCTGAAAAA+AGG | + | chr3_1:88317166-88317185 | None:intergenic | 40.0% | |
| TTCAGGGATGCTACTACAAT+AGG | - | chr3_1:88317169-88317188 | Msa0384890:intron | 40.0% | |
| GGATGCTACTACAATAGGTT+TGG | - | chr3_1:88317174-88317193 | Msa0384890:intron | 40.0% | |
| ! | CATTTAGGATCTACGCCAAA+TGG | + | chr3_1:88317220-88317239 | None:intergenic | 40.0% |
| CATTTGGCGTAGATCCTAAA+TGG | - | chr3_1:88317218-88317237 | Msa0384890:intron | 40.0% | |
| ! | GGAGTATCCCAAATGAATCT+TGG | - | chr3_1:88317304-88317323 | Msa0384890:CDS | 40.0% |
| ! | ATTGGTGCCTGAAGCAATAT+AGG | + | chr3_1:88317454-88317473 | None:intergenic | 40.0% |
| GGAGTGAAAGATAGCCAAAT+AGG | + | chr3_1:88317505-88317524 | None:intergenic | 40.0% | |
| ! | GGCTTTGGTAATAACATCCA+TGG | + | chr3_1:88317777-88317796 | None:intergenic | 40.0% |
| TTCTTCAAGAGAAAGGGCTT+TGG | + | chr3_1:88317792-88317811 | None:intergenic | 40.0% | |
| CCCATTGTAGATCAAAGAGT+AGG | + | chr3_1:88317929-88317948 | None:intergenic | 40.0% | |
| CAGCTTCCTATCTTCGTTTA+TGG | - | chr3_1:88318073-88318092 | Msa0384890:intron | 40.0% | |
| ! | ACAAAGTTTTGCTTCTCGCA+TGG | - | chr3_1:88318330-88318349 | Msa0384890:CDS | 40.0% |
| ! | CAAAGTTTTGCTTCTCGCAT+GGG | - | chr3_1:88318331-88318350 | Msa0384890:CDS | 40.0% |
| ! | AAAGTTTTGCTTCTCGCATG+GGG | - | chr3_1:88318332-88318351 | Msa0384890:CDS | 40.0% |
| !! | TGCATGCTTTGAGACTTCAT+TGG | - | chr3_1:88318526-88318545 | Msa0384890:CDS | 40.0% |
| !! | GCATGCTTTGAGACTTCATT+GGG | - | chr3_1:88318527-88318546 | Msa0384890:CDS | 40.0% |
| ! | GATCGATGAGCCGATTCAAT+TGG | + | chr3_1:88314250-88314269 | None:intergenic | 45.0% |
| CATCGATCCATCTCTTACCT+TGG | - | chr3_1:88314262-88314281 | Msa0384890:CDS | 45.0% | |
| TAGATCGCCAAGGTAAGAGA+TGG | + | chr3_1:88314272-88314291 | None:intergenic | 45.0% | |
| ATCTCTTACCTTGGCGATCT+AGG | - | chr3_1:88314271-88314290 | Msa0384890:CDS | 45.0% | |
| GAAGCATAGGTCTGTTGGAA+TGG | + | chr3_1:88314491-88314510 | None:intergenic | 45.0% | |
| TCTCTCGTTGACCATGTTGA+TGG | + | chr3_1:88314829-88314848 | None:intergenic | 45.0% | |
| TCAACATGGTCAACGAGAGA+TGG | - | chr3_1:88314829-88314848 | Msa0384890:CDS | 45.0% | |
| CATGGGAATGCTCTCTTTAC+CGG | + | chr3_1:88314917-88314936 | None:intergenic | 45.0% | |
| AGGGGAAAGACCAAGCTATA+TGG | + | chr3_1:88315085-88315104 | None:intergenic | 45.0% | |
| GTTGAACTTCAAGCTCTCTC+TGG | + | chr3_1:88315217-88315236 | None:intergenic | 45.0% | |
| !!! | TGTTTTTCTGAAGCAGGCTG+TGG | - | chr3_1:88315478-88315497 | Msa0384890:intron | 45.0% |
| AGATCCTTTGTCAGGAGAGA+AGG | - | chr3_1:88315517-88315536 | Msa0384890:intron | 45.0% | |
| GTAACCTTCTCTCCTGACAA+AGG | + | chr3_1:88315524-88315543 | None:intergenic | 45.0% | |
| TGCAGGCAAAGCAAAAACCA+AGG | + | chr3_1:88315768-88315787 | None:intergenic | 45.0% | |
| !!! | TCCTGTTTTTGCAACAAGCC+AGG | - | chr3_1:88316231-88316250 | Msa0384890:intron | 45.0% |
| !! | ACCTGGCTTGTTGCAAAAAC+AGG | + | chr3_1:88316235-88316254 | None:intergenic | 45.0% |
| GGACTGTAACTCTCAAGTAG+AGG | - | chr3_1:88316379-88316398 | Msa0384890:CDS | 45.0% | |
| TGACAGAATTGCCAAGTACC+AGG | - | chr3_1:88316689-88316708 | Msa0384890:intron | 45.0% | |
| ! | AGGATTTGCTTCCTGGTACT+TGG | + | chr3_1:88316703-88316722 | None:intergenic | 45.0% |
| AAGTACCAGGAAGCAAATCC+TGG | - | chr3_1:88316702-88316721 | Msa0384890:intron | 45.0% | |
| GTGATGATTGTGTACACACC+AGG | + | chr3_1:88316723-88316742 | None:intergenic | 45.0% | |
| ! | ATGTTTGGTGATTGGGGTCA+TGG | - | chr3_1:88316765-88316784 | Msa0384890:intron | 45.0% |
| ATCCTAAATGGCATGGCACA+CGG | - | chr3_1:88317230-88317249 | Msa0384890:CDS | 45.0% | |
| AAAATGGTGCACTGGATCAC+AGG | - | chr3_1:88317535-88317554 | Msa0384890:intron | 45.0% | |
| GGTGAAAACCAGCTCTTTGT+TGG | - | chr3_1:88317611-88317630 | Msa0384890:CDS | 45.0% | |
| ! | ACTTTTGGCCAACAAAGAGC+TGG | + | chr3_1:88317622-88317641 | None:intergenic | 45.0% |
| TGGCACTCATTTCAGTACCA+TGG | - | chr3_1:88317757-88317776 | Msa0384890:intron | 45.0% | |
| TTGTGAATACCACGTGACTC+TGG | + | chr3_1:88317967-88317986 | None:intergenic | 45.0% | |
| CGCTGAAATCAAACTCCTCA+TGG | + | chr3_1:88317993-88318012 | None:intergenic | 45.0% | |
| ! | TGAGGAGTTTGATTTCAGCG+AGG | - | chr3_1:88317993-88318012 | Msa0384890:CDS | 45.0% |
| ! | AAGTTTTGCTTCTCGCATGG+GGG | - | chr3_1:88318333-88318352 | Msa0384890:CDS | 45.0% |
| !!! | TGTATTTATTATATTTTATT+CGG | - | chr3_1:88315622-88315641 | Msa0384890:CDS | 5.0% |
| GAAAAAGGCCTAGATCGCCA+AGG | + | chr3_1:88314282-88314301 | None:intergenic | 50.0% | |
| CCTGTGAAGCATAGGTCTGT+TGG | + | chr3_1:88314496-88314515 | None:intergenic | 50.0% | |
| CCAACAGACCTATGCTTCAC+AGG | - | chr3_1:88314493-88314512 | Msa0384890:CDS | 50.0% | |
| AACTTCAAGCTCTCTCTGGC+GGG | + | chr3_1:88315213-88315232 | None:intergenic | 50.0% | |
| GAACTTCAAGCTCTCTCTGG+CGG | + | chr3_1:88315214-88315233 | None:intergenic | 50.0% | |
| !! | AGTATTGATGCGAGCAACCG+TGG | - | chr3_1:88316358-88316377 | Msa0384890:CDS | 50.0% |
| ! | ACACACCAGGATTTGCTTCC+TGG | + | chr3_1:88316710-88316729 | None:intergenic | 50.0% |
| TGTAGGATCGCGACATCCAT+AGG | + | chr3_1:88317074-88317093 | None:intergenic | 50.0% | |
| GTGCGCGACACTTATCCATT+TGG | - | chr3_1:88317202-88317221 | Msa0384890:intron | 50.0% | |
| GGCGTAGATCCTAAATGGCA+TGG | - | chr3_1:88317223-88317242 | Msa0384890:intron | 50.0% | |
| GAGGGCCCATAAACGAAGAT+AGG | + | chr3_1:88318082-88318101 | None:intergenic | 50.0% | |
| ATCTTCGTTTATGGGCCCTC+AGG | - | chr3_1:88318082-88318101 | Msa0384890:intron | 50.0% | |
| ACATCCCTTAATGACGAGGG+TGG | - | chr3_1:88318609-88318628 | Msa0384890:CDS | 50.0% | |
| CAGTCCACCCTCGTCATTAA+GGG | + | chr3_1:88318616-88318635 | None:intergenic | 50.0% | |
| ACAGTCCACCCTCGTCATTA+AGG | + | chr3_1:88318617-88318636 | None:intergenic | 50.0% | |
| GATGTCGCGATCCTACATGC+AGG | - | chr3_1:88317077-88317096 | Msa0384890:intron | 55.0% | |
| ! | CTCCGTGTGCCATGCCATTT+AGG | + | chr3_1:88317235-88317254 | None:intergenic | 55.0% |
| ! | CCACGTGACTCTGGTTCAAG+AGG | + | chr3_1:88317958-88317977 | None:intergenic | 55.0% |
| CCTCTTGAACCAGAGTCACG+TGG | - | chr3_1:88317955-88317974 | Msa0384890:intron | 55.0% | |
| !! | AAGCTCTCTCTGGCGGGTTG+CGG | + | chr3_1:88315207-88315226 | None:intergenic | 60.0% |
| GTCGCGATCCTACATGCAGG+TGG | - | chr3_1:88317080-88317099 | Msa0384890:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 88314199 | 88318638 | 88314199 | ID=Msa0384890;Name=Msa0384890 |
| chr3_1 | mRNA | 88314199 | 88318638 | 88314199 | ID=Msa0384890-mRNA-1;Parent=Msa0384890;Name=Msa0384890-mRNA-1;_AED=0.15;_eAED=0.17;_QI=0|0|0|1|0.93|0.94|17|0|781 |
| chr3_1 | exon | 88318525 | 88318638 | 88318525 | ID=Msa0384890-mRNA-1:exon:23781;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88318323 | 88318367 | 88318323 | ID=Msa0384890-mRNA-1:exon:23780;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88317961 | 88318083 | 88317961 | ID=Msa0384890-mRNA-1:exon:23779;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88317766 | 88317873 | 88317766 | ID=Msa0384890-mRNA-1:exon:23778;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88317557 | 88317667 | 88317557 | ID=Msa0384890-mRNA-1:exon:23777;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88317227 | 88317472 | 88317227 | ID=Msa0384890-mRNA-1:exon:23776;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88316852 | 88316959 | 88316852 | ID=Msa0384890-mRNA-1:exon:23775;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88316585 | 88316692 | 88316585 | ID=Msa0384890-mRNA-1:exon:23774;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88316339 | 88316487 | 88316339 | ID=Msa0384890-mRNA-1:exon:23773;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88315989 | 88316142 | 88315989 | ID=Msa0384890-mRNA-1:exon:23772;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88315739 | 88315899 | 88315739 | ID=Msa0384890-mRNA-1:exon:23771;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88315531 | 88315663 | 88315531 | ID=Msa0384890-mRNA-1:exon:23770;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88315188 | 88315427 | 88315188 | ID=Msa0384890-mRNA-1:exon:23769;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88315013 | 88315096 | 88315013 | ID=Msa0384890-mRNA-1:exon:23768;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88314734 | 88314927 | 88314734 | ID=Msa0384890-mRNA-1:exon:23767;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88314483 | 88314542 | 88314483 | ID=Msa0384890-mRNA-1:exon:23766;Parent=Msa0384890-mRNA-1 |
| chr3_1 | exon | 88314199 | 88314406 | 88314199 | ID=Msa0384890-mRNA-1:exon:23765;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88318525 | 88318638 | 88318525 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88318323 | 88318367 | 88318323 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88317961 | 88318083 | 88317961 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88317766 | 88317873 | 88317766 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88317557 | 88317667 | 88317557 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88317227 | 88317472 | 88317227 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88316852 | 88316959 | 88316852 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88316585 | 88316692 | 88316585 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88316339 | 88316487 | 88316339 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88315989 | 88316142 | 88315989 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88315739 | 88315899 | 88315739 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88315531 | 88315663 | 88315531 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88315188 | 88315427 | 88315188 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88315013 | 88315096 | 88315013 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88314734 | 88314927 | 88314734 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88314483 | 88314542 | 88314483 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| chr3_1 | CDS | 88314199 | 88314406 | 88314199 | ID=Msa0384890-mRNA-1:cds;Parent=Msa0384890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
