Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0952720 | XP_024628783.1 | 40.399 | 401 | 162 | 2 | 1 | 324 | 1 | 401 | 2.94e-90 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0952720 | A0A072TI67 | 59.921 | 252 | 87 | 4 | 81 | 324 | 3 | 248 | 1.85e-88 | 280 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002240 | Msa0952720 | 0.806007 | 1.013716e-49 | -8.615850e-47 |
| Msa0013750 | Msa0952720 | 0.818840 | 1.588788e-52 | -8.615850e-47 |
| Msa0092630 | Msa0952720 | 0.806914 | 6.526809e-50 | -8.615850e-47 |
| Msa0102070 | Msa0952720 | 0.824291 | 8.742011e-54 | -8.615850e-47 |
| Msa0120300 | Msa0952720 | 0.809654 | 1.700457e-50 | -8.615850e-47 |
| Msa0604350 | Msa0952720 | 0.828649 | 7.996065e-55 | -8.615850e-47 |
| Msa0632740 | Msa0952720 | 0.809628 | 1.722911e-50 | -8.615850e-47 |
| Msa0636170 | Msa0952720 | 0.821395 | 4.130133e-53 | -8.615850e-47 |
| Msa0645300 | Msa0952720 | 0.811608 | 6.431066e-51 | -8.615850e-47 |
| Msa0650630 | Msa0952720 | 0.805959 | 1.037763e-49 | -8.615850e-47 |
| Msa0701010 | Msa0952720 | 0.814977 | 1.170187e-51 | -8.615850e-47 |
| Msa0725850 | Msa0952720 | 0.808007 | 3.825862e-50 | -8.615850e-47 |
| Msa0726140 | Msa0952720 | 0.814446 | 1.534136e-51 | -8.615850e-47 |
| Msa0729030 | Msa0952720 | 0.800894 | 1.163348e-48 | -8.615850e-47 |
| Msa0729800 | Msa0952720 | 0.819011 | 1.452997e-52 | -8.615850e-47 |
| Msa0731940 | Msa0952720 | 0.823905 | 1.077072e-53 | -8.615850e-47 |
| Msa0733290 | Msa0952720 | 0.805033 | 1.622469e-49 | -8.615850e-47 |
| Msa0743810 | Msa0952720 | 0.836414 | 9.492452e-57 | -8.615850e-47 |
| Msa0745060 | Msa0952720 | 0.836539 | 8.818956e-57 | -8.615850e-47 |
| Msa0748970 | Msa0952720 | 0.821028 | 5.019409e-53 | -8.615850e-47 |
| Msa0767720 | Msa0952720 | 0.810858 | 9.354236e-51 | -8.615850e-47 |
| Msa0768290 | Msa0952720 | 0.808587 | 2.877760e-50 | -8.615850e-47 |
| Msa0768370 | Msa0952720 | 0.824848 | 6.462489e-54 | -8.615850e-47 |
| Msa0783160 | Msa0952720 | 0.817436 | 3.301735e-52 | -8.615850e-47 |
| Msa0784290 | Msa0952720 | 0.834144 | 3.552002e-56 | -8.615850e-47 |
| Msa0784300 | Msa0952720 | 0.832850 | 7.471355e-56 | -8.615850e-47 |
| Msa0787600 | Msa0952720 | 0.804772 | 1.839874e-49 | -8.615850e-47 |
| Msa0808010 | Msa0952720 | 0.818653 | 1.751810e-52 | -8.615850e-47 |
| Msa0808020 | Msa0952720 | 0.810614 | 1.056242e-50 | -8.615850e-47 |
| Msa0810220 | Msa0952720 | 0.809548 | 1.791926e-50 | -8.615850e-47 |
| Msa0824590 | Msa0952720 | 0.817647 | 2.958947e-52 | -8.615850e-47 |
| Msa0824600 | Msa0952720 | 0.807024 | 6.186625e-50 | -8.615850e-47 |
| Msa0825860 | Msa0952720 | 0.843705 | 1.188762e-58 | -8.615850e-47 |
| Msa0833290 | Msa0952720 | 0.837016 | 6.665979e-57 | -8.615850e-47 |
| Msa0833300 | Msa0952720 | 0.819394 | 1.188327e-52 | -8.615850e-47 |
| Msa0180500 | Msa0952720 | 0.847683 | 9.899659e-60 | -8.615850e-47 |
| Msa0188460 | Msa0952720 | 0.806100 | 9.692872e-50 | -8.615850e-47 |
| Msa0198910 | Msa0952720 | 0.800862 | 1.181191e-48 | -8.615850e-47 |
| Msa0227480 | Msa0952720 | 0.844204 | 8.740224e-59 | -8.615850e-47 |
| Msa0365500 | Msa0952720 | 0.843260 | 1.563372e-58 | -8.615850e-47 |
| Msa0384800 | Msa0952720 | 0.806964 | 6.369041e-50 | -8.615850e-47 |
| Msa0384890 | Msa0952720 | 0.808001 | 3.837639e-50 | -8.615850e-47 |
| Msa0406120 | Msa0952720 | 0.826980 | 2.014022e-54 | -8.615850e-47 |
| Msa0414410 | Msa0952720 | 0.842222 | 2.950260e-58 | -8.615850e-47 |
| Msa0414420 | Msa0952720 | 0.851395 | 9.124736e-61 | -8.615850e-47 |
| Msa0424320 | Msa0952720 | 0.809283 | 2.042259e-50 | -8.615850e-47 |
| Msa0436780 | Msa0952720 | 0.832070 | 1.165781e-55 | -8.615850e-47 |
| Msa0438620 | Msa0952720 | 0.810193 | 1.302011e-50 | -8.615850e-47 |
| Msa0450000 | Msa0952720 | 0.847966 | 8.275314e-60 | -8.615850e-47 |
| Msa0452900 | Msa0952720 | 0.866762 | 2.248731e-65 | -8.615850e-47 |
| Msa0453120 | Msa0952720 | 0.826369 | 2.816752e-54 | -8.615850e-47 |
| Msa0459160 | Msa0952720 | 0.805991 | 1.021455e-49 | -8.615850e-47 |
| Msa0479340 | Msa0952720 | 0.819014 | 1.450253e-52 | -8.615850e-47 |
| Msa0251320 | Msa0952720 | 0.819537 | 1.102353e-52 | -8.615850e-47 |
| Msa0251640 | Msa0952720 | 0.813334 | 2.698122e-51 | -8.615850e-47 |
| Msa0267000 | Msa0952720 | 0.843577 | 1.286658e-58 | -8.615850e-47 |
| Msa0267010 | Msa0952720 | 0.849393 | 3.327537e-60 | -8.615850e-47 |
| Msa0277070 | Msa0952720 | 0.810042 | 1.403001e-50 | -8.615850e-47 |
| Msa0322360 | Msa0952720 | 0.801344 | 9.410538e-49 | -8.615850e-47 |
| Msa0337900 | Msa0952720 | 0.811435 | 7.010146e-51 | -8.615850e-47 |
| Msa0342240 | Msa0952720 | 0.836419 | 9.460583e-57 | -8.615850e-47 |
| Msa0342750 | Msa0952720 | 0.834522 | 2.854813e-56 | -8.615850e-47 |
| Msa0357680 | Msa0952720 | 0.814589 | 1.426761e-51 | -8.615850e-47 |
| Msa0360510 | Msa0952720 | 0.825635 | 4.209897e-54 | -8.615850e-47 |
| Msa0491590 | Msa0952720 | 0.819438 | 1.161362e-52 | -8.615850e-47 |
| Msa0503430 | Msa0952720 | 0.801530 | 8.621475e-49 | -8.615850e-47 |
| Msa0523940 | Msa0952720 | 0.819712 | 1.005918e-52 | -8.615850e-47 |
| Msa0534540 | Msa0952720 | 0.820768 | 5.762149e-53 | -8.615850e-47 |
| Msa0545700 | Msa0952720 | 0.803503 | 3.380030e-49 | -8.615850e-47 |
| Msa0564890 | Msa0952720 | 0.836575 | 8.635801e-57 | -8.615850e-47 |
| Msa0598780 | Msa0952720 | 0.822798 | 1.952923e-53 | -8.615850e-47 |
| Msa0844410 | Msa0952720 | 0.801478 | 8.835759e-49 | -8.615850e-47 |
| Msa0844420 | Msa0952720 | 0.810969 | 8.848627e-51 | -8.615850e-47 |
| Msa0844450 | Msa0952720 | 0.800199 | 1.612061e-48 | -8.615850e-47 |
| Msa0844470 | Msa0952720 | 0.819507 | 1.120303e-52 | -8.615850e-47 |
| Msa0844480 | Msa0952720 | 0.815739 | 7.921334e-52 | -8.615850e-47 |
| Msa0844490 | Msa0952720 | 0.862186 | 6.055254e-64 | -8.615850e-47 |
| Msa0844500 | Msa0952720 | 0.830204 | 3.350580e-55 | -8.615850e-47 |
| Msa0845930 | Msa0952720 | 0.806812 | 6.858235e-50 | -8.615850e-47 |
| Msa0846330 | Msa0952720 | 0.816620 | 5.035435e-52 | -8.615850e-47 |
| Msa0846350 | Msa0952720 | 0.806456 | 8.156180e-50 | -8.615850e-47 |
| Msa0848960 | Msa0952720 | 0.806070 | 9.834142e-50 | -8.615850e-47 |
| Msa0849030 | Msa0952720 | 0.801155 | 1.028841e-48 | -8.615850e-47 |
| Msa0853610 | Msa0952720 | 0.800940 | 1.138435e-48 | -8.615850e-47 |
| Msa0857680 | Msa0952720 | 0.802584 | 5.234617e-49 | -8.615850e-47 |
| Msa0858980 | Msa0952720 | 0.843152 | 1.670359e-58 | -8.615850e-47 |
| Msa0864070 | Msa0952720 | 0.812645 | 3.819434e-51 | -8.615850e-47 |
| Msa0865320 | Msa0952720 | 0.822943 | 1.807577e-53 | -8.615850e-47 |
| Msa0872230 | Msa0952720 | 0.808105 | 3.647440e-50 | -8.615850e-47 |
| Msa0877250 | Msa0952720 | 0.841862 | 3.672637e-58 | -8.615850e-47 |
| Msa0888130 | Msa0952720 | 0.813182 | 2.913878e-51 | -8.615850e-47 |
| Msa0888370 | Msa0952720 | 0.815362 | 9.610584e-52 | -8.615850e-47 |
| Msa0888420 | Msa0952720 | 0.897029 | 2.089157e-76 | -8.615850e-47 |
| Msa0897330 | Msa0952720 | 0.814125 | 1.806331e-51 | -8.615850e-47 |
| Msa0899430 | Msa0952720 | 0.859601 | 3.694106e-63 | -8.615850e-47 |
| Msa0899450 | Msa0952720 | 0.842917 | 1.928596e-58 | -8.615850e-47 |
| Msa0901070 | Msa0952720 | 0.815282 | 1.001467e-51 | -8.615850e-47 |
| Msa0907260 | Msa0952720 | 0.807736 | 4.368761e-50 | -8.615850e-47 |
| Msa0914760 | Msa0952720 | 0.926988 | 2.194623e-91 | -8.615850e-47 |
| Msa0927380 | Msa0952720 | 0.818301 | 2.105552e-52 | -8.615850e-47 |
| Msa0952720 | Msa0953120 | 0.839376 | 1.644163e-57 | -8.615850e-47 |
| Msa0952720 | Msa0956270 | 0.805999 | 1.017841e-49 | -8.615850e-47 |
| Msa0952720 | Msa0958550 | 0.853409 | 2.435535e-61 | -8.615850e-47 |
| Msa0952720 | Msa0964900 | 0.809125 | 2.208160e-50 | -8.615850e-47 |
| Msa0952720 | Msa0966750 | 0.834920 | 2.267911e-56 | -8.615850e-47 |
| Msa0952720 | Msa0966760 | 0.811305 | 7.482422e-51 | -8.615850e-47 |
| Msa0952720 | Msa0967180 | 0.800577 | 1.350054e-48 | -8.615850e-47 |
| Msa0952720 | Msa0967280 | 0.800974 | 1.120272e-48 | -8.615850e-47 |
| Msa0952720 | Msa0974080 | 0.840550 | 8.129576e-58 | -8.615850e-47 |
| Msa0952720 | Msa0981270 | 0.811636 | 6.339683e-51 | -8.615850e-47 |
| Msa0952720 | Msa0981370 | 0.851284 | 9.810796e-61 | -8.615850e-47 |
| Msa0952720 | Msa0991830 | 0.820832 | 5.568346e-53 | -8.615850e-47 |
| Msa0952720 | Msa0992280 | 0.803084 | 4.127318e-49 | -8.615850e-47 |
| Msa0952720 | Msa0998690 | 0.811600 | 6.454746e-51 | -8.615850e-47 |
| Msa0952720 | Msa0999220 | 0.809427 | 1.902124e-50 | -8.615850e-47 |
| Msa0952720 | Msa1014540 | 0.812307 | 4.528490e-51 | -8.615850e-47 |
| Msa0952720 | Msa1016280 | 0.844841 | 5.889894e-59 | -8.615850e-47 |
| Msa0952720 | Msa1020190 | 0.806397 | 8.389418e-50 | -8.615850e-47 |
| Msa0952720 | Msa1023050 | 0.801582 | 8.411656e-49 | -8.615850e-47 |
| Msa0952720 | Msa1025360 | 0.857545 | 1.517726e-62 | -8.615850e-47 |
| Msa0952720 | Msa1025370 | 0.845721 | 3.402587e-59 | -8.615850e-47 |
| Msa0952720 | Msa1028230 | 0.804088 | 2.554830e-49 | -8.615850e-47 |
| Msa0952720 | Msa1044830 | 0.852694 | 3.900839e-61 | -8.615850e-47 |
| Msa0952720 | Msa1044840 | 0.856049 | 4.181965e-62 | -8.615850e-47 |
| Msa0952720 | Msa1060840 | 0.844745 | 6.250667e-59 | -8.615850e-47 |
| Msa0952720 | Msa1092990 | 0.806206 | 9.208063e-50 | -8.615850e-47 |
| Msa0952720 | Msa1100980 | 0.834205 | 3.429348e-56 | -8.615850e-47 |
| Msa0952720 | Msa1109440 | 0.847937 | 8.428426e-60 | -8.615850e-47 |
| Msa0952720 | Msa1112300 | 0.830603 | 2.675465e-55 | -8.615850e-47 |
| Msa0952720 | Msa1113170 | 0.815779 | 7.760463e-52 | -8.615850e-47 |
| Msa0952720 | Msa1117150 | 0.805428 | 1.341316e-49 | -8.615850e-47 |
| Msa0952720 | Msa1121200 | 0.836873 | 7.247647e-57 | -8.615850e-47 |
| Msa0952720 | Msa1121480 | 0.805295 | 1.430576e-49 | -8.615850e-47 |
| Msa0952720 | Msa1121490 | 0.812936 | 3.298147e-51 | -8.615850e-47 |
| Msa0952720 | Msa1135740 | 0.812413 | 4.292703e-51 | -8.615850e-47 |
| Msa0952720 | Msa1137570 | 0.810876 | 9.268008e-51 | -8.615850e-47 |
| Msa0952720 | Msa1146100 | 0.808722 | 2.694052e-50 | -8.615850e-47 |
| Msa0952720 | Msa1146110 | 0.823205 | 1.569842e-53 | -8.615850e-47 |
| Msa0952720 | Msa1149360 | 0.856566 | 2.950316e-62 | -8.615850e-47 |
| Msa0952720 | Msa1150370 | 0.818661 | 1.745035e-52 | -8.615850e-47 |
| Msa0952720 | Msa1173920 | 0.829304 | 5.548819e-55 | -8.615850e-47 |
| Msa0952720 | Msa1184420 | 0.832385 | 9.742881e-56 | -8.615850e-47 |
| Msa0952720 | Msa1192640 | 0.845074 | 5.093985e-59 | -8.615850e-47 |
| Msa0952720 | Msa1248310 | 0.817389 | 3.382567e-52 | -8.615850e-47 |
| Msa0952720 | Msa1248370 | 0.802932 | 4.436108e-49 | -8.615850e-47 |
| Msa0952720 | Msa1253000 | 0.803064 | 4.166986e-49 | -8.615850e-47 |
| Msa0952720 | Msa1269670 | 0.829626 | 4.634178e-55 | -8.615850e-47 |
| Msa0952720 | Msa1270230 | 0.835084 | 2.060911e-56 | -8.615850e-47 |
| Msa0952720 | Msa1270240 | 0.802072 | 6.672038e-49 | -8.615850e-47 |
| Msa0952720 | Msa1270270 | 0.815674 | 8.190807e-52 | -8.615850e-47 |
| Msa0952720 | Msa1277660 | 0.810345 | 1.207364e-50 | -8.615850e-47 |
| Msa0952720 | Msa1283330 | 0.826754 | 2.280644e-54 | -8.615850e-47 |
| Msa0952720 | Msa1284680 | 0.815897 | 7.306758e-52 | -8.615850e-47 |
| Msa0952720 | Msa1285930 | 0.852582 | 4.200581e-61 | -8.615850e-47 |
| Msa0952720 | Msa1286800 | 0.810169 | 1.317553e-50 | -8.615850e-47 |
| Msa0952720 | Msa1287190 | 0.802949 | 4.400178e-49 | -8.615850e-47 |
| Msa0952720 | Msa1287800 | 0.851067 | 1.129670e-60 | -8.615850e-47 |
| Msa0952720 | Msa1287810 | 0.860791 | 1.614368e-63 | -8.615850e-47 |
| Msa0952720 | Msa1288560 | 0.882601 | 9.083935e-71 | -8.615850e-47 |
| Msa0952720 | Msa1289430 | 0.813826 | 2.102216e-51 | -8.615850e-47 |
| Msa0952720 | Msa1307890 | 0.813171 | 2.929101e-51 | -8.615850e-47 |
| Msa0952720 | Msa1320300 | 0.811197 | 7.897718e-51 | -8.615850e-47 |
| Msa0952720 | Msa1340590 | 0.803541 | 3.317982e-49 | -8.615850e-47 |
| Msa0952720 | Msa1344520 | 0.812724 | 3.670823e-51 | -8.615850e-47 |
| Msa0952720 | Msa1366810 | 0.809875 | 1.524252e-50 | -8.615850e-47 |
| Msa0952720 | Msa1369430 | 0.808776 | 2.623114e-50 | -8.615850e-47 |
| Msa0952720 | Msa1387280 | 0.810117 | 1.351891e-50 | -8.615850e-47 |
| Msa0952720 | Msa1397150 | 0.806055 | 9.906809e-50 | -8.615850e-47 |
| Msa0952720 | Msa1397580 | 0.807107 | 5.941404e-50 | -8.615850e-47 |
| Msa0952720 | Msa1402790 | 0.816050 | 6.754088e-52 | -8.615850e-47 |
| Msa0952720 | Msa1404000 | 0.827717 | 1.341090e-54 | -8.615850e-47 |
| Msa0952720 | Msa1410680 | 0.813814 | 2.115836e-51 | -8.615850e-47 |
| Msa0952720 | Msa1412530 | 0.805037 | 1.619850e-49 | -8.615850e-47 |
| Msa0952720 | Msa1415310 | 0.828682 | 7.849603e-55 | -8.615850e-47 |
| Msa0952720 | Msa1433120 | 0.855113 | 7.844320e-62 | -8.615850e-47 |
| Msa0952720 | Msa1451570 | 0.805809 | 1.115915e-49 | -8.615850e-47 |
| Msa0952720 | Msa1458750 | 0.801441 | 8.991276e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0952720 | MtrunA17_Chr6g0469931 | 42.169 | 166 | 59 | 6 | 11 | 146 | 11 | 169 | 2.09e-25 | 106 |
| Msa0952720 | MtrunA17_Chr2g0279021 | 31.792 | 173 | 111 | 2 | 153 | 324 | 94 | 260 | 1.38e-23 | 100 |
| Msa0952720 | MtrunA17_Chr4g0077081 | 36.667 | 150 | 78 | 2 | 144 | 283 | 13 | 155 | 2.38e-23 | 94.7 |
| Msa0952720 | MtrunA17_Chr8g0374181 | 32.374 | 139 | 93 | 1 | 187 | 324 | 4 | 142 | 8.21e-20 | 87.8 |
| Msa0952720 | MtrunA17_Chr4g0019691 | 37.838 | 111 | 68 | 1 | 197 | 306 | 22 | 132 | 5.85e-19 | 83.2 |
| Msa0952720 | MtrunA17_Chr7g0259081 | 33.333 | 168 | 88 | 4 | 1 | 144 | 1 | 168 | 5.86e-18 | 80.1 |
| Msa0952720 | MtrunA17_Chr6g0469811 | 33.824 | 136 | 66 | 3 | 3 | 114 | 12 | 147 | 2.34e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 94 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTGATCACAATCATTT+TGG | 0.209160 | 6_3:-47709498 | None:intergenic |
| TCAAGCGACGGTCGAATTCT+TGG | 0.253420 | 6_3:-47710078 | None:intergenic |
| AGGTCCGAGTGGCCAGAATT+TGG | 0.311706 | 6_3:+47708828 | Msa0952720:CDS |
| GCTGCGAATGTCCTCTTTGA+TGG | 0.328370 | 6_3:+47710693 | Msa0952720:CDS |
| GGTTGGGACCTCCCAAATTC+TGG | 0.334168 | 6_3:-47708840 | None:intergenic |
| GGATTATGTGCGCGCAAGAT+TGG | 0.335852 | 6_3:+47709279 | Msa0952720:CDS |
| AATGAGTTATCTGGAGATCT+AGG | 0.342061 | 6_3:+47709053 | Msa0952720:CDS |
| CGGTGACATTGTTGATGGTT+TGG | 0.347370 | 6_3:+47710179 | Msa0952720:CDS |
| CTTCCTCACACTTGCATGTA+TGG | 0.352940 | 6_3:-47709082 | None:intergenic |
| CATTGTTGATGGTTTGGTTG+AGG | 0.360306 | 6_3:+47710185 | Msa0952720:CDS |
| TCAAATGAAGACCAAGGTTC+AGG | 0.365297 | 6_3:+47709227 | Msa0952720:intron |
| GGTCCGAGTGGCCAGAATTT+GGG | 0.377633 | 6_3:+47708829 | Msa0952720:CDS |
| GATTATGTGCGCGCAAGATT+GGG | 0.382148 | 6_3:+47709280 | Msa0952720:CDS |
| TTGATGGTTCATACAGGGTT+AGG | 0.385662 | 6_3:+47710709 | Msa0952720:CDS |
| GCAAGATTGGGGACGTTTGT+GGG | 0.386052 | 6_3:+47709292 | Msa0952720:CDS |
| CGCAAGATTGGGGACGTTTG+TGG | 0.387411 | 6_3:+47709291 | Msa0952720:CDS |
| TAATGTATTGTAGACATCAT+TGG | 0.398299 | 6_3:+47709422 | Msa0952720:intron |
| TTCAACTTCAGAAGCTCATC+AGG | 0.404631 | 6_3:-47710633 | None:intergenic |
| ATTGTTGATGGTTTGGTTGA+GGG | 0.406007 | 6_3:+47710186 | Msa0952720:CDS |
| CTGCTGAGAAGGAGTACGTT+CGG | 0.412854 | 6_3:+47709462 | Msa0952720:CDS |
| TCCTCTTTGATGGTTCATAC+AGG | 0.415345 | 6_3:+47710703 | Msa0952720:CDS |
| TCAAGTGAGTTGGTCTGCTC+AGG | 0.415558 | 6_3:-47708872 | None:intergenic |
| GTTGTCGGTGACATTGTTGA+TGG | 0.417362 | 6_3:+47710174 | Msa0952720:CDS |
| TACTGTTGATTACGACCATT+TGG | 0.417983 | 6_3:+47709317 | Msa0952720:CDS |
| TGCTGGTCATAGGGTGAGCT+TGG | 0.424066 | 6_3:+47710116 | Msa0952720:CDS |
| TTGGACCAATCACCGGCATC+GGG | 0.424932 | 6_3:-47710059 | None:intergenic |
| TGCTCAGGCTTCAGAAAGGT+TGG | 0.443164 | 6_3:-47708857 | None:intergenic |
| CAAGGACTCTTGGAGGTTGA+AGG | 0.443571 | 6_3:+47708808 | Msa0952720:CDS |
| TTGTGCCTAGCAAGGACTCT+TGG | 0.448471 | 6_3:+47708798 | Msa0952720:CDS |
| TTGTTGATGGTTTGGTTGAG+GGG | 0.451983 | 6_3:+47710187 | Msa0952720:CDS |
| TGTTGATATTCTTAGGTATG+AGG | 0.459645 | 6_3:+47710383 | Msa0952720:intron |
| TGCTGAGAAGGAGTACGTTC+GGG | 0.464503 | 6_3:+47709463 | Msa0952720:CDS |
| CTTGGACCAATCACCGGCAT+CGG | 0.467503 | 6_3:-47710060 | None:intergenic |
| TGATGAGCTTCTGAAGTTGA+AGG | 0.477423 | 6_3:+47710635 | Msa0952720:CDS |
| TGCCTAGCAAGGACTCTTGG+AGG | 0.484658 | 6_3:+47708801 | Msa0952720:CDS |
| TGTTGATGGTTTGGTTGAGG+GGG | 0.485457 | 6_3:+47710188 | Msa0952720:CDS |
| AGAGGTGTTGCACCCGACTT+TGG | 0.486560 | 6_3:+47710243 | Msa0952720:CDS |
| TGATTTGGTGTCGGCTGCCA+AGG | 0.487713 | 6_3:+47710494 | Msa0952720:CDS |
| TTCAATACTCACCAACCAAA+TGG | 0.490463 | 6_3:-47709332 | None:intergenic |
| TGAATGATGTTGTTGACAAT+GGG | 0.491991 | 6_3:+47710145 | Msa0952720:CDS |
| ATTTGTGTCGGCGATGGTGA+TGG | 0.493785 | 6_3:+47710411 | Msa0952720:CDS |
| ATGTGTTTCAGATGGTTCCT+AGG | 0.494807 | 6_3:+47710295 | Msa0952720:CDS |
| GCTCAGGCTTCAGAAAGGTT+GGG | 0.498445 | 6_3:-47708856 | None:intergenic |
| ATTGGTGGTATCTTGTCTGT+AGG | 0.499392 | 6_3:+47710214 | Msa0952720:CDS |
| CAGTAGTAAGCACCAAAGTC+GGG | 0.502969 | 6_3:-47710255 | None:intergenic |
| TTGAATGATGTTGTTGACAA+TGG | 0.504599 | 6_3:+47710144 | Msa0952720:CDS |
| AGATCTCCAGATAACTCATT+AGG | 0.505587 | 6_3:-47709050 | None:intergenic |
| CTTTGGTGCTTACTACTGCA+AGG | 0.505637 | 6_3:+47710260 | Msa0952720:CDS |
| AATTCGACCGTCGCTTGAAG+AGG | 0.508626 | 6_3:+47710083 | Msa0952720:CDS |
| CCTCCCAAATTCTGGCCACT+CGG | 0.509318 | 6_3:-47708832 | None:intergenic |
| GACATCATTGGTGTTATGAC+TGG | 0.510553 | 6_3:+47709434 | Msa0952720:intron |
| GACTGGGATTTCTGCTGAGA+AGG | 0.512732 | 6_3:+47709451 | Msa0952720:CDS |
| CCTCTTTGATGGTTCATACA+GGG | 0.514043 | 6_3:+47710704 | Msa0952720:CDS |
| AGGTAAACAGTGTAGTGATT+TGG | 0.515437 | 6_3:+47710479 | Msa0952720:CDS |
| CGTGAAGCATGTGTTTCAGA+TGG | 0.519230 | 6_3:+47710287 | Msa0952720:CDS |
| GCAGTAGTAAGCACCAAAGT+CGG | 0.526570 | 6_3:-47710256 | None:intergenic |
| TGAGCAAACAGCCCCGATGC+CGG | 0.529201 | 6_3:+47710047 | Msa0952720:CDS |
| AACAGCTGAAATCAAATCAA+AGG | 0.535389 | 6_3:-47708777 | None:intergenic |
| ACAGCTGAAATCAAATCAAA+GGG | 0.537717 | 6_3:-47708776 | None:intergenic |
| AGTTCTCAGATTCCACAATA+CGG | 0.541801 | 6_3:+47709258 | Msa0952720:CDS |
| TTCAGCTGTTGTGCCTAGCA+AGG | 0.543003 | 6_3:+47708790 | Msa0952720:CDS |
| GATGGTGCTCATTGATGAAA+AGG | 0.543220 | 6_3:+47708895 | Msa0952720:CDS |
| CGCGCACATAATCCGTATTG+TGG | 0.546184 | 6_3:-47709270 | None:intergenic |
| GACAATGGGAATTATGTTGT+CGG | 0.561718 | 6_3:+47710159 | Msa0952720:CDS |
| TTTGGTGCTTACTACTGCAA+GGG | 0.563438 | 6_3:+47710261 | Msa0952720:CDS |
| TTTGTGTCGGCGATGGTGAT+GGG | 0.566047 | 6_3:+47710412 | Msa0952720:CDS |
| CGAATTCTTGGACCAATCAC+CGG | 0.566155 | 6_3:-47710066 | None:intergenic |
| ATTATGTGCGCGCAAGATTG+GGG | 0.566678 | 6_3:+47709281 | Msa0952720:CDS |
| AGTGATATGCAGAATTTGCT+AGG | 0.567774 | 6_3:+47710459 | Msa0952720:CDS |
| ATGAGTTATCTGGAGATCTA+GGG | 0.569263 | 6_3:+47709054 | Msa0952720:CDS |
| GGTCTGCTCAGGCTTCAGAA+AGG | 0.574625 | 6_3:-47708861 | None:intergenic |
| ACTCTCACTTGCCTGAACCT+TGG | 0.576384 | 6_3:-47709238 | None:intergenic |
| GGAGTACGTTCGGGATGGCA+AGG | 0.577455 | 6_3:+47709472 | Msa0952720:CDS |
| GATGAGCTTCTGAAGTTGAA+GGG | 0.577993 | 6_3:+47710636 | Msa0952720:CDS |
| ACATCATTGGTGTTATGACT+GGG | 0.584395 | 6_3:+47709435 | Msa0952720:CDS |
| GAGCACCATCTCAAGTGAGT+TGG | 0.587463 | 6_3:-47708882 | None:intergenic |
| TGATCAAGTTGACTGATGAC+AGG | 0.593944 | 6_3:+47709510 | Msa0952720:CDS |
| CCCTGTATGAACCATCAAAG+AGG | 0.606077 | 6_3:-47710704 | None:intergenic |
| TTGTGTAGGATTGATGTGCA+TGG | 0.606996 | 6_3:+47710021 | Msa0952720:intron |
| GCAGACCAACTCACTTGAGA+TGG | 0.607842 | 6_3:+47708877 | Msa0952720:CDS |
| GTTGATTACGACCATTTGGT+TGG | 0.612055 | 6_3:+47709321 | Msa0952720:CDS |
| GTGAAGATTTGTGTCGGCGA+TGG | 0.615323 | 6_3:+47710405 | Msa0952720:CDS |
| GAGAAGGAGTACGTTCGGGA+TGG | 0.623106 | 6_3:+47709467 | Msa0952720:CDS |
| CTTGTCTGTAGGTTTCATAG+AGG | 0.628864 | 6_3:+47710225 | Msa0952720:CDS |
| AACCTCCAAGAGTCCTTGCT+AGG | 0.629201 | 6_3:-47708803 | None:intergenic |
| TATGAGGTGAAGATTTGTGT+CGG | 0.649300 | 6_3:+47710399 | Msa0952720:CDS |
| GCACCATACATGCAAGTGTG+AGG | 0.649453 | 6_3:+47709079 | Msa0952720:CDS |
| ATTCAAAGTCGAGAAATCAT+CGG | 0.652813 | 6_3:+47710671 | Msa0952720:CDS |
| ACAGTGTAGTGATTTGGTGT+CGG | 0.655103 | 6_3:+47710485 | Msa0952720:CDS |
| AAGCTCATCAGGATAAAACC+CGG | 0.657890 | 6_3:-47710622 | None:intergenic |
| CCGAGTGGCCAGAATTTGGG+AGG | 0.668427 | 6_3:+47708832 | Msa0952720:CDS |
| TGGACCAATCACCGGCATCG+GGG | 0.690300 | 6_3:-47710058 | None:intergenic |
| GGTTCATACAGGGTTAGGAG+AGG | 0.702192 | 6_3:+47710714 | Msa0952720:CDS |
| TTGGAGGTTGAAGGTCCGAG+TGG | 0.736514 | 6_3:+47708817 | Msa0952720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTTCAAAAATGTAT+AGG | + | chr6_3:47710590-47710609 | Msa0952720:intron | 10.0% |
| !! | TTATTATTTCAAAAATGTAT+AGG | + | chr6_3:47710590-47710609 | Msa0952720:intron | 10.0% |
| !! | ACAAATTAAAATACAACAAT+AGG | - | chr6_3:47709730-47709749 | None:intergenic | 15.0% |
| !!! | TGTTGTATTTTAATTTGTTA+AGG | + | chr6_3:47709732-47709751 | Msa0952720:intron | 15.0% |
| !! | ACAAATTAAAATACAACAAT+AGG | - | chr6_3:47709730-47709749 | None:intergenic | 15.0% |
| !!! | TGTTGTATTTTAATTTGTTA+AGG | + | chr6_3:47709732-47709751 | Msa0952720:intron | 15.0% |
| !! | AAACATTACAACATGAATAA+AGG | - | chr6_3:47708977-47708996 | None:intergenic | 20.0% |
| !!! | TGTTGTAATGTTTTTGTATT+TGG | + | chr6_3:47708984-47709003 | Msa0952720:intron | 20.0% |
| !!! | ATTTGAAAAAGTAACTTGTA+AGG | - | chr6_3:47709213-47709232 | None:intergenic | 20.0% |
| !!! | TGTTTTTAGTTTTATTGTCA+TGG | + | chr6_3:47709371-47709390 | Msa0952720:intron | 20.0% |
| !!! | GTTTTTAGTTTTATTGTCAT+GGG | + | chr6_3:47709372-47709391 | Msa0952720:intron | 20.0% |
| !!! | TTTTTAGTTTTATTGTCATG+GGG | + | chr6_3:47709373-47709392 | Msa0952720:intron | 20.0% |
| !!! | CATTTTTTTTAAGAATACCT+TGG | - | chr6_3:47710514-47710533 | None:intergenic | 20.0% |
| !! | AAACATTACAACATGAATAA+AGG | - | chr6_3:47708977-47708996 | None:intergenic | 20.0% |
| !!! | TGTTGTAATGTTTTTGTATT+TGG | + | chr6_3:47708984-47709003 | Msa0952720:intron | 20.0% |
| !!! | ATTTGAAAAAGTAACTTGTA+AGG | - | chr6_3:47709213-47709232 | None:intergenic | 20.0% |
| !!! | TGTTTTTAGTTTTATTGTCA+TGG | + | chr6_3:47709371-47709390 | Msa0952720:intron | 20.0% |
| !!! | GTTTTTAGTTTTATTGTCAT+GGG | + | chr6_3:47709372-47709391 | Msa0952720:intron | 20.0% |
| !!! | TTTTTAGTTTTATTGTCATG+GGG | + | chr6_3:47709373-47709392 | Msa0952720:intron | 20.0% |
| !!! | CATTTTTTTTAAGAATACCT+TGG | - | chr6_3:47710514-47710533 | None:intergenic | 20.0% |
| !! | TGTTTATGTTGTGTAGTTTT+TGG | + | chr6_3:47708924-47708943 | Msa0952720:intron | 25.0% |
| !!! | TAGTTTTTGGAGTTTTGATA+TGG | + | chr6_3:47708937-47708956 | Msa0952720:intron | 25.0% |
| !! | TTTTTGTATTTGGTATTGTC+TGG | + | chr6_3:47708994-47709013 | Msa0952720:intron | 25.0% |
| ! | TAATGTATTGTAGACATCAT+TGG | + | chr6_3:47709422-47709441 | Msa0952720:intron | 25.0% |
| !!! | TTGGTAATTTTTTGTAGACA+AGG | + | chr6_3:47709836-47709855 | Msa0952720:intron | 25.0% |
| !! | TTTGTGTTTGTATTTTGTGT+AGG | + | chr6_3:47710007-47710026 | Msa0952720:intron | 25.0% |
| ! | CATGTTATGTTGATATTCTT+AGG | + | chr6_3:47710376-47710395 | Msa0952720:intron | 25.0% |
| !! | AATGTCTTGCAATTTTGTTA+TGG | + | chr6_3:47710547-47710566 | Msa0952720:intron | 25.0% |
| !! | TGTTTATGTTGTGTAGTTTT+TGG | + | chr6_3:47708924-47708943 | Msa0952720:intron | 25.0% |
| !!! | TAGTTTTTGGAGTTTTGATA+TGG | + | chr6_3:47708937-47708956 | Msa0952720:intron | 25.0% |
| !! | TTTTTGTATTTGGTATTGTC+TGG | + | chr6_3:47708994-47709013 | Msa0952720:intron | 25.0% |
| ! | TAATGTATTGTAGACATCAT+TGG | + | chr6_3:47709422-47709441 | Msa0952720:intron | 25.0% |
| !!! | TTGGTAATTTTTTGTAGACA+AGG | + | chr6_3:47709836-47709855 | Msa0952720:intron | 25.0% |
| !! | TTTGTGTTTGTATTTTGTGT+AGG | + | chr6_3:47710007-47710026 | Msa0952720:intron | 25.0% |
| ! | CATGTTATGTTGATATTCTT+AGG | + | chr6_3:47710376-47710395 | Msa0952720:intron | 25.0% |
| !! | AATGTCTTGCAATTTTGTTA+TGG | + | chr6_3:47710547-47710566 | Msa0952720:intron | 25.0% |
| ACAGCTGAAATCAAATCAAA+GGG | - | chr6_3:47708779-47708798 | None:intergenic | 30.0% | |
| AACAGCTGAAATCAAATCAA+AGG | - | chr6_3:47708780-47708799 | None:intergenic | 30.0% | |
| !!! | ACTTTTTCAAATGAAGACCA+AGG | + | chr6_3:47709221-47709240 | Msa0952720:intron | 30.0% |
| ! | TTTATTGTCATGGGGTTTTA+TGG | + | chr6_3:47709381-47709400 | Msa0952720:intron | 30.0% |
| ! | CAACTTGATCACAATCATTT+TGG | - | chr6_3:47709501-47709520 | None:intergenic | 30.0% |
| !!! | TGTCAGTGTTTTTTGTGAAT+AGG | + | chr6_3:47709545-47709564 | Msa0952720:intron | 30.0% |
| ! | TCACGGGAAAATTTTTGAAT+GGG | + | chr6_3:47709701-47709720 | Msa0952720:intron | 30.0% |
| GTTAAGGTTAAGATATTTCG+AGG | + | chr6_3:47709748-47709767 | Msa0952720:intron | 30.0% | |
| TGATGAGGTTGTTAAGTTTA+AGG | + | chr6_3:47709911-47709930 | Msa0952720:intron | 30.0% | |
| TACAACAATAAACAACTGAC+AGG | - | chr6_3:47709977-47709996 | None:intergenic | 30.0% | |
| TTGAATGATGTTGTTGACAA+TGG | + | chr6_3:47710144-47710163 | Msa0952720:CDS | 30.0% | |
| TGAATGATGTTGTTGACAAT+GGG | + | chr6_3:47710145-47710164 | Msa0952720:CDS | 30.0% | |
| GCTAATGTTATCCTAATGAT+TGG | + | chr6_3:47710322-47710341 | Msa0952720:intron | 30.0% | |
| TGTTGATATTCTTAGGTATG+AGG | + | chr6_3:47710383-47710402 | Msa0952720:intron | 30.0% | |
| ! | TTTGTTATGGATTTGTGTGT+TGG | + | chr6_3:47710560-47710579 | Msa0952720:intron | 30.0% |
| ATTCAAAGTCGAGAAATCAT+CGG | + | chr6_3:47710671-47710690 | Msa0952720:CDS | 30.0% | |
| ACAGCTGAAATCAAATCAAA+GGG | - | chr6_3:47708779-47708798 | None:intergenic | 30.0% | |
| AACAGCTGAAATCAAATCAA+AGG | - | chr6_3:47708780-47708799 | None:intergenic | 30.0% | |
| !!! | ACTTTTTCAAATGAAGACCA+AGG | + | chr6_3:47709221-47709240 | Msa0952720:intron | 30.0% |
| ! | TTTATTGTCATGGGGTTTTA+TGG | + | chr6_3:47709381-47709400 | Msa0952720:intron | 30.0% |
| ! | CAACTTGATCACAATCATTT+TGG | - | chr6_3:47709501-47709520 | None:intergenic | 30.0% |
| !!! | TGTCAGTGTTTTTTGTGAAT+AGG | + | chr6_3:47709545-47709564 | Msa0952720:intron | 30.0% |
| ! | TCACGGGAAAATTTTTGAAT+GGG | + | chr6_3:47709701-47709720 | Msa0952720:intron | 30.0% |
| GTTAAGGTTAAGATATTTCG+AGG | + | chr6_3:47709748-47709767 | Msa0952720:intron | 30.0% | |
| TGATGAGGTTGTTAAGTTTA+AGG | + | chr6_3:47709911-47709930 | Msa0952720:intron | 30.0% | |
| TACAACAATAAACAACTGAC+AGG | - | chr6_3:47709977-47709996 | None:intergenic | 30.0% | |
| TTGAATGATGTTGTTGACAA+TGG | + | chr6_3:47710144-47710163 | Msa0952720:CDS | 30.0% | |
| TGAATGATGTTGTTGACAAT+GGG | + | chr6_3:47710145-47710164 | Msa0952720:CDS | 30.0% | |
| GCTAATGTTATCCTAATGAT+TGG | + | chr6_3:47710322-47710341 | Msa0952720:intron | 30.0% | |
| TGTTGATATTCTTAGGTATG+AGG | + | chr6_3:47710383-47710402 | Msa0952720:intron | 30.0% | |
| ! | TTTGTTATGGATTTGTGTGT+TGG | + | chr6_3:47710560-47710579 | Msa0952720:intron | 30.0% |
| ATTCAAAGTCGAGAAATCAT+CGG | + | chr6_3:47710671-47710690 | Msa0952720:CDS | 30.0% | |
| ! | GTTTTGCCTAATGAGTTATC+TGG | + | chr6_3:47709044-47709063 | Msa0952720:CDS | 35.0% |
| AGATCTCCAGATAACTCATT+AGG | - | chr6_3:47709053-47709072 | None:intergenic | 35.0% | |
| AATGAGTTATCTGGAGATCT+AGG | + | chr6_3:47709053-47709072 | Msa0952720:CDS | 35.0% | |
| ATGAGTTATCTGGAGATCTA+GGG | + | chr6_3:47709054-47709073 | Msa0952720:CDS | 35.0% | |
| AGTTCTCAGATTCCACAATA+CGG | + | chr6_3:47709258-47709277 | Msa0952720:CDS | 35.0% | |
| ! | TACTGTTGATTACGACCATT+TGG | + | chr6_3:47709317-47709336 | Msa0952720:CDS | 35.0% |
| TTCAATACTCACCAACCAAA+TGG | - | chr6_3:47709335-47709354 | None:intergenic | 35.0% | |
| !! | ACATCATTGGTGTTATGACT+GGG | + | chr6_3:47709435-47709454 | Msa0952720:CDS | 35.0% |
| ATAACCAATCCATGAGACAA+CGG | - | chr6_3:47709604-47709623 | None:intergenic | 35.0% | |
| ! | CTCACGGGAAAATTTTTGAA+TGG | + | chr6_3:47709700-47709719 | Msa0952720:intron | 35.0% |
| GGTTAAGATATTTCGAGGTA+TGG | + | chr6_3:47709753-47709772 | Msa0952720:intron | 35.0% | |
| !!! | TAGTGGTTTTGGTGAATCTT+TGG | + | chr6_3:47709817-47709836 | Msa0952720:intron | 35.0% |
| TAACAACCTCATCAATGTCA+GGG | - | chr6_3:47709905-47709924 | None:intergenic | 35.0% | |
| TTAACAACCTCATCAATGTC+AGG | - | chr6_3:47709906-47709925 | None:intergenic | 35.0% | |
| TGAGGTTGTTAAGTTTAAGG+AGG | + | chr6_3:47709914-47709933 | Msa0952720:intron | 35.0% | |
| GAGGTTGTTAAGTTTAAGGA+GGG | + | chr6_3:47709915-47709934 | Msa0952720:intron | 35.0% | |
| AGGTTGTTAAGTTTAAGGAG+GGG | + | chr6_3:47709916-47709935 | Msa0952720:intron | 35.0% | |
| GACAATGGGAATTATGTTGT+CGG | + | chr6_3:47710159-47710178 | Msa0952720:CDS | 35.0% | |
| !! | ATTGTTGATGGTTTGGTTGA+GGG | + | chr6_3:47710186-47710205 | Msa0952720:CDS | 35.0% |
| GGATAACATTAGCATTACCT+AGG | - | chr6_3:47710315-47710334 | None:intergenic | 35.0% | |
| ACACAAAGACACCAATCATT+AGG | - | chr6_3:47710336-47710355 | None:intergenic | 35.0% | |
| TATGAGGTGAAGATTTGTGT+CGG | + | chr6_3:47710399-47710418 | Msa0952720:CDS | 35.0% | |
| ! | AGTGATATGCAGAATTTGCT+AGG | + | chr6_3:47710459-47710478 | Msa0952720:CDS | 35.0% |
| AGGTAAACAGTGTAGTGATT+TGG | + | chr6_3:47710479-47710498 | Msa0952720:CDS | 35.0% | |
| AATGTATAGGCCAAAAATGC+CGG | + | chr6_3:47710603-47710622 | Msa0952720:intron | 35.0% | |
| ! | GTTTTGCCTAATGAGTTATC+TGG | + | chr6_3:47709044-47709063 | Msa0952720:CDS | 35.0% |
| AGATCTCCAGATAACTCATT+AGG | - | chr6_3:47709053-47709072 | None:intergenic | 35.0% | |
| AATGAGTTATCTGGAGATCT+AGG | + | chr6_3:47709053-47709072 | Msa0952720:CDS | 35.0% | |
| ATGAGTTATCTGGAGATCTA+GGG | + | chr6_3:47709054-47709073 | Msa0952720:CDS | 35.0% | |
| AGTTCTCAGATTCCACAATA+CGG | + | chr6_3:47709258-47709277 | Msa0952720:CDS | 35.0% | |
| ! | TACTGTTGATTACGACCATT+TGG | + | chr6_3:47709317-47709336 | Msa0952720:CDS | 35.0% |
| TTCAATACTCACCAACCAAA+TGG | - | chr6_3:47709335-47709354 | None:intergenic | 35.0% | |
| !! | ACATCATTGGTGTTATGACT+GGG | + | chr6_3:47709435-47709454 | Msa0952720:CDS | 35.0% |
| ATAACCAATCCATGAGACAA+CGG | - | chr6_3:47709604-47709623 | None:intergenic | 35.0% | |
| ! | CTCACGGGAAAATTTTTGAA+TGG | + | chr6_3:47709700-47709719 | Msa0952720:intron | 35.0% |
| GGTTAAGATATTTCGAGGTA+TGG | + | chr6_3:47709753-47709772 | Msa0952720:intron | 35.0% | |
| !!! | TAGTGGTTTTGGTGAATCTT+TGG | + | chr6_3:47709817-47709836 | Msa0952720:intron | 35.0% |
| TAACAACCTCATCAATGTCA+GGG | - | chr6_3:47709905-47709924 | None:intergenic | 35.0% | |
| TTAACAACCTCATCAATGTC+AGG | - | chr6_3:47709906-47709925 | None:intergenic | 35.0% | |
| TGAGGTTGTTAAGTTTAAGG+AGG | + | chr6_3:47709914-47709933 | Msa0952720:intron | 35.0% | |
| GAGGTTGTTAAGTTTAAGGA+GGG | + | chr6_3:47709915-47709934 | Msa0952720:intron | 35.0% | |
| AGGTTGTTAAGTTTAAGGAG+GGG | + | chr6_3:47709916-47709935 | Msa0952720:intron | 35.0% | |
| GACAATGGGAATTATGTTGT+CGG | + | chr6_3:47710159-47710178 | Msa0952720:CDS | 35.0% | |
| !! | ATTGTTGATGGTTTGGTTGA+GGG | + | chr6_3:47710186-47710205 | Msa0952720:CDS | 35.0% |
| GGATAACATTAGCATTACCT+AGG | - | chr6_3:47710315-47710334 | None:intergenic | 35.0% | |
| ACACAAAGACACCAATCATT+AGG | - | chr6_3:47710336-47710355 | None:intergenic | 35.0% | |
| TATGAGGTGAAGATTTGTGT+CGG | + | chr6_3:47710399-47710418 | Msa0952720:CDS | 35.0% | |
| ! | AGTGATATGCAGAATTTGCT+AGG | + | chr6_3:47710459-47710478 | Msa0952720:CDS | 35.0% |
| AGGTAAACAGTGTAGTGATT+TGG | + | chr6_3:47710479-47710498 | Msa0952720:CDS | 35.0% | |
| AATGTATAGGCCAAAAATGC+CGG | + | chr6_3:47710603-47710622 | Msa0952720:intron | 35.0% | |
| GATGGTGCTCATTGATGAAA+AGG | + | chr6_3:47708895-47708914 | Msa0952720:CDS | 40.0% | |
| ACAAAGACAGAACTACAGAC+TGG | - | chr6_3:47709022-47709041 | None:intergenic | 40.0% | |
| ACTCGGAGCAATAGAGAAAT+AGG | - | chr6_3:47709163-47709182 | None:intergenic | 40.0% | |
| !! | TGTAAGGATGAAGTGTCGAA+CGG | - | chr6_3:47709197-47709216 | None:intergenic | 40.0% |
| TCAAATGAAGACCAAGGTTC+AGG | + | chr6_3:47709227-47709246 | Msa0952720:intron | 40.0% | |
| GTTGATTACGACCATTTGGT+TGG | + | chr6_3:47709321-47709340 | Msa0952720:CDS | 40.0% | |
| !! | ATGGGGTTTTATGGTTGTTG+AGG | + | chr6_3:47709390-47709409 | Msa0952720:intron | 40.0% |
| !! | GACATCATTGGTGTTATGAC+TGG | + | chr6_3:47709434-47709453 | Msa0952720:intron | 40.0% |
| !! | TGATCAAGTTGACTGATGAC+AGG | + | chr6_3:47709510-47709529 | Msa0952720:CDS | 40.0% |
| ATTATCGTTCCGTTGTCTCA+TGG | + | chr6_3:47709592-47709611 | Msa0952720:intron | 40.0% | |
| AAGGTTGAGTGTGCATTGTT+TGG | + | chr6_3:47709652-47709671 | Msa0952720:intron | 40.0% | |
| ATTCACCAAAACCACTACGA+AGG | - | chr6_3:47709814-47709833 | None:intergenic | 40.0% | |
| !! | AGGGTTGATAAGAATCATGG+TGG | - | chr6_3:47709886-47709905 | None:intergenic | 40.0% |
| !! | GTCAGGGTTGATAAGAATCA+TGG | - | chr6_3:47709889-47709908 | None:intergenic | 40.0% |
| TATCAACCCTGACATTGATG+AGG | + | chr6_3:47709896-47709915 | Msa0952720:intron | 40.0% | |
| TTGTGTAGGATTGATGTGCA+TGG | + | chr6_3:47710021-47710040 | Msa0952720:intron | 40.0% | |
| AAAAACTCCTCTTCAAGCGA+CGG | - | chr6_3:47710093-47710112 | None:intergenic | 40.0% | |
| !!! | AGTTTTTGGTTGCTGGTCAT+AGG | + | chr6_3:47710106-47710125 | Msa0952720:CDS | 40.0% |
| !!! | GTTTTTGGTTGCTGGTCATA+GGG | + | chr6_3:47710107-47710126 | Msa0952720:CDS | 40.0% |
| !! | CATTGTTGATGGTTTGGTTG+AGG | + | chr6_3:47710185-47710204 | Msa0952720:CDS | 40.0% |
| !! | TTGTTGATGGTTTGGTTGAG+GGG | + | chr6_3:47710187-47710206 | Msa0952720:CDS | 40.0% |
| ! | ATTGGTGGTATCTTGTCTGT+AGG | + | chr6_3:47710214-47710233 | Msa0952720:CDS | 40.0% |
| CTTGTCTGTAGGTTTCATAG+AGG | + | chr6_3:47710225-47710244 | Msa0952720:CDS | 40.0% | |
| !! | TTTGGTGCTTACTACTGCAA+GGG | + | chr6_3:47710261-47710280 | Msa0952720:CDS | 40.0% |
| ATGTGTTTCAGATGGTTCCT+AGG | + | chr6_3:47710295-47710314 | Msa0952720:CDS | 40.0% | |
| !! | ACAGTGTAGTGATTTGGTGT+CGG | + | chr6_3:47710485-47710504 | Msa0952720:CDS | 40.0% |
| GTTATGGATTTGTGTGTTGG+TGG | + | chr6_3:47710563-47710582 | Msa0952720:intron | 40.0% | |
| ATGTATAGGCCAAAAATGCC+GGG | + | chr6_3:47710604-47710623 | Msa0952720:intron | 40.0% | |
| ! | AGGATAAAACCCGGCATTTT+TGG | - | chr6_3:47710616-47710635 | None:intergenic | 40.0% |
| AAGCTCATCAGGATAAAACC+CGG | - | chr6_3:47710625-47710644 | None:intergenic | 40.0% | |
| TTCAACTTCAGAAGCTCATC+AGG | - | chr6_3:47710636-47710655 | None:intergenic | 40.0% | |
| !! | TGATGAGCTTCTGAAGTTGA+AGG | + | chr6_3:47710635-47710654 | Msa0952720:CDS | 40.0% |
| !! | GATGAGCTTCTGAAGTTGAA+GGG | + | chr6_3:47710636-47710655 | Msa0952720:CDS | 40.0% |
| ! | TCCTCTTTGATGGTTCATAC+AGG | + | chr6_3:47710703-47710722 | Msa0952720:CDS | 40.0% |
| ! | CCTCTTTGATGGTTCATACA+GGG | + | chr6_3:47710704-47710723 | Msa0952720:CDS | 40.0% |
| ! | TTGATGGTTCATACAGGGTT+AGG | + | chr6_3:47710709-47710728 | Msa0952720:CDS | 40.0% |
| GATGGTGCTCATTGATGAAA+AGG | + | chr6_3:47708895-47708914 | Msa0952720:CDS | 40.0% | |
| ACAAAGACAGAACTACAGAC+TGG | - | chr6_3:47709022-47709041 | None:intergenic | 40.0% | |
| ACTCGGAGCAATAGAGAAAT+AGG | - | chr6_3:47709163-47709182 | None:intergenic | 40.0% | |
| !! | TGTAAGGATGAAGTGTCGAA+CGG | - | chr6_3:47709197-47709216 | None:intergenic | 40.0% |
| TCAAATGAAGACCAAGGTTC+AGG | + | chr6_3:47709227-47709246 | Msa0952720:intron | 40.0% | |
| GTTGATTACGACCATTTGGT+TGG | + | chr6_3:47709321-47709340 | Msa0952720:CDS | 40.0% | |
| !! | ATGGGGTTTTATGGTTGTTG+AGG | + | chr6_3:47709390-47709409 | Msa0952720:intron | 40.0% |
| !! | GACATCATTGGTGTTATGAC+TGG | + | chr6_3:47709434-47709453 | Msa0952720:intron | 40.0% |
| !! | TGATCAAGTTGACTGATGAC+AGG | + | chr6_3:47709510-47709529 | Msa0952720:CDS | 40.0% |
| ATTATCGTTCCGTTGTCTCA+TGG | + | chr6_3:47709592-47709611 | Msa0952720:intron | 40.0% | |
| AAGGTTGAGTGTGCATTGTT+TGG | + | chr6_3:47709652-47709671 | Msa0952720:intron | 40.0% | |
| ATTCACCAAAACCACTACGA+AGG | - | chr6_3:47709814-47709833 | None:intergenic | 40.0% | |
| !! | AGGGTTGATAAGAATCATGG+TGG | - | chr6_3:47709886-47709905 | None:intergenic | 40.0% |
| !! | GTCAGGGTTGATAAGAATCA+TGG | - | chr6_3:47709889-47709908 | None:intergenic | 40.0% |
| TATCAACCCTGACATTGATG+AGG | + | chr6_3:47709896-47709915 | Msa0952720:intron | 40.0% | |
| TTGTGTAGGATTGATGTGCA+TGG | + | chr6_3:47710021-47710040 | Msa0952720:intron | 40.0% | |
| AAAAACTCCTCTTCAAGCGA+CGG | - | chr6_3:47710093-47710112 | None:intergenic | 40.0% | |
| !!! | AGTTTTTGGTTGCTGGTCAT+AGG | + | chr6_3:47710106-47710125 | Msa0952720:CDS | 40.0% |
| !!! | GTTTTTGGTTGCTGGTCATA+GGG | + | chr6_3:47710107-47710126 | Msa0952720:CDS | 40.0% |
| !! | CATTGTTGATGGTTTGGTTG+AGG | + | chr6_3:47710185-47710204 | Msa0952720:CDS | 40.0% |
| !! | TTGTTGATGGTTTGGTTGAG+GGG | + | chr6_3:47710187-47710206 | Msa0952720:CDS | 40.0% |
| ! | ATTGGTGGTATCTTGTCTGT+AGG | + | chr6_3:47710214-47710233 | Msa0952720:CDS | 40.0% |
| CTTGTCTGTAGGTTTCATAG+AGG | + | chr6_3:47710225-47710244 | Msa0952720:CDS | 40.0% | |
| !! | TTTGGTGCTTACTACTGCAA+GGG | + | chr6_3:47710261-47710280 | Msa0952720:CDS | 40.0% |
| ATGTGTTTCAGATGGTTCCT+AGG | + | chr6_3:47710295-47710314 | Msa0952720:CDS | 40.0% | |
| !! | ACAGTGTAGTGATTTGGTGT+CGG | + | chr6_3:47710485-47710504 | Msa0952720:CDS | 40.0% |
| GTTATGGATTTGTGTGTTGG+TGG | + | chr6_3:47710563-47710582 | Msa0952720:intron | 40.0% | |
| ATGTATAGGCCAAAAATGCC+GGG | + | chr6_3:47710604-47710623 | Msa0952720:intron | 40.0% | |
| ! | AGGATAAAACCCGGCATTTT+TGG | - | chr6_3:47710616-47710635 | None:intergenic | 40.0% |
| AAGCTCATCAGGATAAAACC+CGG | - | chr6_3:47710625-47710644 | None:intergenic | 40.0% | |
| TTCAACTTCAGAAGCTCATC+AGG | - | chr6_3:47710636-47710655 | None:intergenic | 40.0% | |
| !! | TGATGAGCTTCTGAAGTTGA+AGG | + | chr6_3:47710635-47710654 | Msa0952720:CDS | 40.0% |
| !! | GATGAGCTTCTGAAGTTGAA+GGG | + | chr6_3:47710636-47710655 | Msa0952720:CDS | 40.0% |
| ! | TCCTCTTTGATGGTTCATAC+AGG | + | chr6_3:47710703-47710722 | Msa0952720:CDS | 40.0% |
| ! | CCTCTTTGATGGTTCATACA+GGG | + | chr6_3:47710704-47710723 | Msa0952720:CDS | 40.0% |
| ! | TTGATGGTTCATACAGGGTT+AGG | + | chr6_3:47710709-47710728 | Msa0952720:CDS | 40.0% |
| CTTCCTCACACTTGCATGTA+TGG | - | chr6_3:47709085-47709104 | None:intergenic | 45.0% | |
| ATGTGTTCCAGCCGAAACTA+AGG | + | chr6_3:47709115-47709134 | Msa0952720:intron | 45.0% | |
| TGTGTTCCAGCCGAAACTAA+GGG | + | chr6_3:47709116-47709135 | Msa0952720:intron | 45.0% | |
| ACATCCCCATCCCTTAGTTT+CGG | - | chr6_3:47709129-47709148 | None:intergenic | 45.0% | |
| TTCTCTATTGCTCCGAGTGT+TGG | + | chr6_3:47709165-47709184 | Msa0952720:intron | 45.0% | |
| TCTCTATTGCTCCGAGTGTT+GGG | + | chr6_3:47709166-47709185 | Msa0952720:intron | 45.0% | |
| GATTATGTGCGCGCAAGATT+GGG | + | chr6_3:47709280-47709299 | Msa0952720:CDS | 45.0% | |
| ATTATGTGCGCGCAAGATTG+GGG | + | chr6_3:47709281-47709300 | Msa0952720:CDS | 45.0% | |
| !! | GGTTTTATGGTTGTTGAGGC+TGG | + | chr6_3:47709394-47709413 | Msa0952720:intron | 45.0% |
| ! | TGACCTTTTGCTCAAGCTCA+CGG | + | chr6_3:47709684-47709703 | Msa0952720:intron | 45.0% |
| AAACCACTACGAAGGATTGG+CGG | - | chr6_3:47709806-47709825 | None:intergenic | 45.0% | |
| CCAAAACCACTACGAAGGAT+TGG | - | chr6_3:47709809-47709828 | None:intergenic | 45.0% | |
| ! | CCAATCCTTCGTAGTGGTTT+TGG | + | chr6_3:47709806-47709825 | Msa0952720:intron | 45.0% |
| ! | GGCATTCAACACGTTCTAGA+GGG | - | chr6_3:47709865-47709884 | None:intergenic | 45.0% |
| TGGCATTCAACACGTTCTAG+AGG | - | chr6_3:47709866-47709885 | None:intergenic | 45.0% | |
| CGAATTCTTGGACCAATCAC+CGG | - | chr6_3:47710069-47710088 | None:intergenic | 45.0% | |
| ! | GTCGCTTGAAGAGGAGTTTT+TGG | + | chr6_3:47710092-47710111 | Msa0952720:CDS | 45.0% |
| !!! | GAAGAGGAGTTTTTGGTTGC+TGG | + | chr6_3:47710099-47710118 | Msa0952720:CDS | 45.0% |
| GTTGTCGGTGACATTGTTGA+TGG | + | chr6_3:47710174-47710193 | Msa0952720:CDS | 45.0% | |
| !! | CGGTGACATTGTTGATGGTT+TGG | + | chr6_3:47710179-47710198 | Msa0952720:CDS | 45.0% |
| !! | TGTTGATGGTTTGGTTGAGG+GGG | + | chr6_3:47710188-47710207 | Msa0952720:CDS | 45.0% |
| CAGTAGTAAGCACCAAAGTC+GGG | - | chr6_3:47710258-47710277 | None:intergenic | 45.0% | |
| GCAGTAGTAAGCACCAAAGT+CGG | - | chr6_3:47710259-47710278 | None:intergenic | 45.0% | |
| !! | CTTTGGTGCTTACTACTGCA+AGG | + | chr6_3:47710260-47710279 | Msa0952720:CDS | 45.0% |
| CGTGAAGCATGTGTTTCAGA+TGG | + | chr6_3:47710287-47710306 | Msa0952720:CDS | 45.0% | |
| CCCTGTATGAACCATCAAAG+AGG | - | chr6_3:47710707-47710726 | None:intergenic | 45.0% | |
| CTTCCTCACACTTGCATGTA+TGG | - | chr6_3:47709085-47709104 | None:intergenic | 45.0% | |
| ATGTGTTCCAGCCGAAACTA+AGG | + | chr6_3:47709115-47709134 | Msa0952720:intron | 45.0% | |
| TGTGTTCCAGCCGAAACTAA+GGG | + | chr6_3:47709116-47709135 | Msa0952720:intron | 45.0% | |
| ACATCCCCATCCCTTAGTTT+CGG | - | chr6_3:47709129-47709148 | None:intergenic | 45.0% | |
| TTCTCTATTGCTCCGAGTGT+TGG | + | chr6_3:47709165-47709184 | Msa0952720:intron | 45.0% | |
| TCTCTATTGCTCCGAGTGTT+GGG | + | chr6_3:47709166-47709185 | Msa0952720:intron | 45.0% | |
| GATTATGTGCGCGCAAGATT+GGG | + | chr6_3:47709280-47709299 | Msa0952720:CDS | 45.0% | |
| ATTATGTGCGCGCAAGATTG+GGG | + | chr6_3:47709281-47709300 | Msa0952720:CDS | 45.0% | |
| !! | GGTTTTATGGTTGTTGAGGC+TGG | + | chr6_3:47709394-47709413 | Msa0952720:intron | 45.0% |
| ! | TGACCTTTTGCTCAAGCTCA+CGG | + | chr6_3:47709684-47709703 | Msa0952720:intron | 45.0% |
| AAACCACTACGAAGGATTGG+CGG | - | chr6_3:47709806-47709825 | None:intergenic | 45.0% | |
| CCAAAACCACTACGAAGGAT+TGG | - | chr6_3:47709809-47709828 | None:intergenic | 45.0% | |
| ! | CCAATCCTTCGTAGTGGTTT+TGG | + | chr6_3:47709806-47709825 | Msa0952720:intron | 45.0% |
| ! | GGCATTCAACACGTTCTAGA+GGG | - | chr6_3:47709865-47709884 | None:intergenic | 45.0% |
| TGGCATTCAACACGTTCTAG+AGG | - | chr6_3:47709866-47709885 | None:intergenic | 45.0% | |
| CGAATTCTTGGACCAATCAC+CGG | - | chr6_3:47710069-47710088 | None:intergenic | 45.0% | |
| ! | GTCGCTTGAAGAGGAGTTTT+TGG | + | chr6_3:47710092-47710111 | Msa0952720:CDS | 45.0% |
| !!! | GAAGAGGAGTTTTTGGTTGC+TGG | + | chr6_3:47710099-47710118 | Msa0952720:CDS | 45.0% |
| GTTGTCGGTGACATTGTTGA+TGG | + | chr6_3:47710174-47710193 | Msa0952720:CDS | 45.0% | |
| !! | CGGTGACATTGTTGATGGTT+TGG | + | chr6_3:47710179-47710198 | Msa0952720:CDS | 45.0% |
| !! | TGTTGATGGTTTGGTTGAGG+GGG | + | chr6_3:47710188-47710207 | Msa0952720:CDS | 45.0% |
| CAGTAGTAAGCACCAAAGTC+GGG | - | chr6_3:47710258-47710277 | None:intergenic | 45.0% | |
| GCAGTAGTAAGCACCAAAGT+CGG | - | chr6_3:47710259-47710278 | None:intergenic | 45.0% | |
| !! | CTTTGGTGCTTACTACTGCA+AGG | + | chr6_3:47710260-47710279 | Msa0952720:CDS | 45.0% |
| CGTGAAGCATGTGTTTCAGA+TGG | + | chr6_3:47710287-47710306 | Msa0952720:CDS | 45.0% | |
| CCCTGTATGAACCATCAAAG+AGG | - | chr6_3:47710707-47710726 | None:intergenic | 45.0% | |
| TTCAGCTGTTGTGCCTAGCA+AGG | + | chr6_3:47708790-47708809 | Msa0952720:CDS | 50.0% | |
| TTGTGCCTAGCAAGGACTCT+TGG | + | chr6_3:47708798-47708817 | Msa0952720:CDS | 50.0% | |
| AACCTCCAAGAGTCCTTGCT+AGG | - | chr6_3:47708806-47708825 | None:intergenic | 50.0% | |
| CAAGGACTCTTGGAGGTTGA+AGG | + | chr6_3:47708808-47708827 | Msa0952720:CDS | 50.0% | |
| GCTCAGGCTTCAGAAAGGTT+GGG | - | chr6_3:47708859-47708878 | None:intergenic | 50.0% | |
| TGCTCAGGCTTCAGAAAGGT+TGG | - | chr6_3:47708860-47708879 | None:intergenic | 50.0% | |
| !! | TCAAGTGAGTTGGTCTGCTC+AGG | - | chr6_3:47708875-47708894 | None:intergenic | 50.0% |
| GCAGACCAACTCACTTGAGA+TGG | + | chr6_3:47708877-47708896 | Msa0952720:CDS | 50.0% | |
| GAGCACCATCTCAAGTGAGT+TGG | - | chr6_3:47708885-47708904 | None:intergenic | 50.0% | |
| GCACCATACATGCAAGTGTG+AGG | + | chr6_3:47709079-47709098 | Msa0952720:CDS | 50.0% | |
| TTCCAGCCGAAACTAAGGGA+TGG | + | chr6_3:47709120-47709139 | Msa0952720:intron | 50.0% | |
| TCCAGCCGAAACTAAGGGAT+GGG | + | chr6_3:47709121-47709140 | Msa0952720:intron | 50.0% | |
| GAACGGTATGACCCAACACT+CGG | - | chr6_3:47709180-47709199 | None:intergenic | 50.0% | |
| ACTCTCACTTGCCTGAACCT+TGG | - | chr6_3:47709241-47709260 | None:intergenic | 50.0% | |
| CGCGCACATAATCCGTATTG+TGG | - | chr6_3:47709273-47709292 | None:intergenic | 50.0% | |
| GGATTATGTGCGCGCAAGAT+TGG | + | chr6_3:47709279-47709298 | Msa0952720:CDS | 50.0% | |
| GCAAGATTGGGGACGTTTGT+GGG | + | chr6_3:47709292-47709311 | Msa0952720:CDS | 50.0% | |
| GACTGGGATTTCTGCTGAGA+AGG | + | chr6_3:47709451-47709470 | Msa0952720:CDS | 50.0% | |
| ! | CTGCTGAGAAGGAGTACGTT+CGG | + | chr6_3:47709462-47709481 | Msa0952720:CDS | 50.0% |
| ! | TGCTGAGAAGGAGTACGTTC+GGG | + | chr6_3:47709463-47709482 | Msa0952720:CDS | 50.0% |
| CGTTCCGTTGTCTCATGGAT+TGG | + | chr6_3:47709597-47709616 | Msa0952720:intron | 50.0% | |
| CGTGTGATTATGTTGCCCAG+TGG | + | chr6_3:47709628-47709647 | Msa0952720:intron | 50.0% | |
| GATTATGTTGCCCAGTGGCA+AGG | + | chr6_3:47709633-47709652 | Msa0952720:intron | 50.0% | |
| ! | GACCTTTTGCTCAAGCTCAC+GGG | + | chr6_3:47709685-47709704 | Msa0952720:intron | 50.0% |
| TTCCCGTGAGCTTGAGCAAA+AGG | - | chr6_3:47709690-47709709 | None:intergenic | 50.0% | |
| TCAAGCGACGGTCGAATTCT+TGG | - | chr6_3:47710081-47710100 | None:intergenic | 50.0% | |
| AATTCGACCGTCGCTTGAAG+AGG | + | chr6_3:47710083-47710102 | Msa0952720:CDS | 50.0% | |
| GTTTGGTTGAGGGGGATGAT+TGG | + | chr6_3:47710196-47710215 | Msa0952720:CDS | 50.0% | |
| ! | GTGAAGATTTGTGTCGGCGA+TGG | + | chr6_3:47710405-47710424 | Msa0952720:CDS | 50.0% |
| ! | ATTTGTGTCGGCGATGGTGA+TGG | + | chr6_3:47710411-47710430 | Msa0952720:CDS | 50.0% |
| ! | TTTGTGTCGGCGATGGTGAT+GGG | + | chr6_3:47710412-47710431 | Msa0952720:CDS | 50.0% |
| GCTGCGAATGTCCTCTTTGA+TGG | + | chr6_3:47710693-47710712 | Msa0952720:CDS | 50.0% | |
| GGTTCATACAGGGTTAGGAG+AGG | + | chr6_3:47710714-47710733 | Msa0952720:CDS | 50.0% | |
| TTCAGCTGTTGTGCCTAGCA+AGG | + | chr6_3:47708790-47708809 | Msa0952720:CDS | 50.0% | |
| TTGTGCCTAGCAAGGACTCT+TGG | + | chr6_3:47708798-47708817 | Msa0952720:CDS | 50.0% | |
| AACCTCCAAGAGTCCTTGCT+AGG | - | chr6_3:47708806-47708825 | None:intergenic | 50.0% | |
| CAAGGACTCTTGGAGGTTGA+AGG | + | chr6_3:47708808-47708827 | Msa0952720:CDS | 50.0% | |
| GCTCAGGCTTCAGAAAGGTT+GGG | - | chr6_3:47708859-47708878 | None:intergenic | 50.0% | |
| TGCTCAGGCTTCAGAAAGGT+TGG | - | chr6_3:47708860-47708879 | None:intergenic | 50.0% | |
| !! | TCAAGTGAGTTGGTCTGCTC+AGG | - | chr6_3:47708875-47708894 | None:intergenic | 50.0% |
| GCAGACCAACTCACTTGAGA+TGG | + | chr6_3:47708877-47708896 | Msa0952720:CDS | 50.0% | |
| GAGCACCATCTCAAGTGAGT+TGG | - | chr6_3:47708885-47708904 | None:intergenic | 50.0% | |
| GCACCATACATGCAAGTGTG+AGG | + | chr6_3:47709079-47709098 | Msa0952720:CDS | 50.0% | |
| TTCCAGCCGAAACTAAGGGA+TGG | + | chr6_3:47709120-47709139 | Msa0952720:intron | 50.0% | |
| TCCAGCCGAAACTAAGGGAT+GGG | + | chr6_3:47709121-47709140 | Msa0952720:intron | 50.0% | |
| GAACGGTATGACCCAACACT+CGG | - | chr6_3:47709180-47709199 | None:intergenic | 50.0% | |
| ACTCTCACTTGCCTGAACCT+TGG | - | chr6_3:47709241-47709260 | None:intergenic | 50.0% | |
| CGCGCACATAATCCGTATTG+TGG | - | chr6_3:47709273-47709292 | None:intergenic | 50.0% | |
| GGATTATGTGCGCGCAAGAT+TGG | + | chr6_3:47709279-47709298 | Msa0952720:CDS | 50.0% | |
| GCAAGATTGGGGACGTTTGT+GGG | + | chr6_3:47709292-47709311 | Msa0952720:CDS | 50.0% | |
| GACTGGGATTTCTGCTGAGA+AGG | + | chr6_3:47709451-47709470 | Msa0952720:CDS | 50.0% | |
| ! | CTGCTGAGAAGGAGTACGTT+CGG | + | chr6_3:47709462-47709481 | Msa0952720:CDS | 50.0% |
| ! | TGCTGAGAAGGAGTACGTTC+GGG | + | chr6_3:47709463-47709482 | Msa0952720:CDS | 50.0% |
| CGTTCCGTTGTCTCATGGAT+TGG | + | chr6_3:47709597-47709616 | Msa0952720:intron | 50.0% | |
| CGTGTGATTATGTTGCCCAG+TGG | + | chr6_3:47709628-47709647 | Msa0952720:intron | 50.0% | |
| GATTATGTTGCCCAGTGGCA+AGG | + | chr6_3:47709633-47709652 | Msa0952720:intron | 50.0% | |
| ! | GACCTTTTGCTCAAGCTCAC+GGG | + | chr6_3:47709685-47709704 | Msa0952720:intron | 50.0% |
| TTCCCGTGAGCTTGAGCAAA+AGG | - | chr6_3:47709690-47709709 | None:intergenic | 50.0% | |
| TCAAGCGACGGTCGAATTCT+TGG | - | chr6_3:47710081-47710100 | None:intergenic | 50.0% | |
| AATTCGACCGTCGCTTGAAG+AGG | + | chr6_3:47710083-47710102 | Msa0952720:CDS | 50.0% | |
| GTTTGGTTGAGGGGGATGAT+TGG | + | chr6_3:47710196-47710215 | Msa0952720:CDS | 50.0% | |
| ! | GTGAAGATTTGTGTCGGCGA+TGG | + | chr6_3:47710405-47710424 | Msa0952720:CDS | 50.0% |
| ! | ATTTGTGTCGGCGATGGTGA+TGG | + | chr6_3:47710411-47710430 | Msa0952720:CDS | 50.0% |
| ! | TTTGTGTCGGCGATGGTGAT+GGG | + | chr6_3:47710412-47710431 | Msa0952720:CDS | 50.0% |
| GCTGCGAATGTCCTCTTTGA+TGG | + | chr6_3:47710693-47710712 | Msa0952720:CDS | 50.0% | |
| GGTTCATACAGGGTTAGGAG+AGG | + | chr6_3:47710714-47710733 | Msa0952720:CDS | 50.0% | |
| TGCCTAGCAAGGACTCTTGG+AGG | + | chr6_3:47708801-47708820 | Msa0952720:CDS | 55.0% | |
| TTGGAGGTTGAAGGTCCGAG+TGG | + | chr6_3:47708817-47708836 | Msa0952720:CDS | 55.0% | |
| AGGTCCGAGTGGCCAGAATT+TGG | + | chr6_3:47708828-47708847 | Msa0952720:CDS | 55.0% | |
| GGTCCGAGTGGCCAGAATTT+GGG | + | chr6_3:47708829-47708848 | Msa0952720:CDS | 55.0% | |
| CCTCCCAAATTCTGGCCACT+CGG | - | chr6_3:47708835-47708854 | None:intergenic | 55.0% | |
| GGTTGGGACCTCCCAAATTC+TGG | - | chr6_3:47708843-47708862 | None:intergenic | 55.0% | |
| GGTCTGCTCAGGCTTCAGAA+AGG | - | chr6_3:47708864-47708883 | None:intergenic | 55.0% | |
| CCAGCCGAAACTAAGGGATG+GGG | + | chr6_3:47709122-47709141 | Msa0952720:intron | 55.0% | |
| CGCAAGATTGGGGACGTTTG+TGG | + | chr6_3:47709291-47709310 | Msa0952720:CDS | 55.0% | |
| ! | GAGAAGGAGTACGTTCGGGA+TGG | + | chr6_3:47709467-47709486 | Msa0952720:CDS | 55.0% |
| GCACACTCAACCTTGCCACT+GGG | - | chr6_3:47709646-47709665 | None:intergenic | 55.0% | |
| TGCACACTCAACCTTGCCAC+TGG | - | chr6_3:47709647-47709666 | None:intergenic | 55.0% | |
| TGACCGCCAATCCTTCGTAG+TGG | + | chr6_3:47709800-47709819 | Msa0952720:intron | 55.0% | |
| TTGGACCAATCACCGGCATC+GGG | - | chr6_3:47710062-47710081 | None:intergenic | 55.0% | |
| CTTGGACCAATCACCGGCAT+CGG | - | chr6_3:47710063-47710082 | None:intergenic | 55.0% | |
| TGCTGGTCATAGGGTGAGCT+TGG | + | chr6_3:47710116-47710135 | Msa0952720:CDS | 55.0% | |
| TGGTTGAGGGGGATGATTGG+TGG | + | chr6_3:47710199-47710218 | Msa0952720:CDS | 55.0% | |
| !! | AGAGGTGTTGCACCCGACTT+TGG | + | chr6_3:47710243-47710262 | Msa0952720:CDS | 55.0% |
| !! | TGATTTGGTGTCGGCTGCCA+AGG | + | chr6_3:47710494-47710513 | Msa0952720:CDS | 55.0% |
| TGCCTAGCAAGGACTCTTGG+AGG | + | chr6_3:47708801-47708820 | Msa0952720:CDS | 55.0% | |
| TTGGAGGTTGAAGGTCCGAG+TGG | + | chr6_3:47708817-47708836 | Msa0952720:CDS | 55.0% | |
| AGGTCCGAGTGGCCAGAATT+TGG | + | chr6_3:47708828-47708847 | Msa0952720:CDS | 55.0% | |
| GGTCCGAGTGGCCAGAATTT+GGG | + | chr6_3:47708829-47708848 | Msa0952720:CDS | 55.0% | |
| CCTCCCAAATTCTGGCCACT+CGG | - | chr6_3:47708835-47708854 | None:intergenic | 55.0% | |
| GGTTGGGACCTCCCAAATTC+TGG | - | chr6_3:47708843-47708862 | None:intergenic | 55.0% | |
| GGTCTGCTCAGGCTTCAGAA+AGG | - | chr6_3:47708864-47708883 | None:intergenic | 55.0% | |
| CCAGCCGAAACTAAGGGATG+GGG | + | chr6_3:47709122-47709141 | Msa0952720:intron | 55.0% | |
| CGCAAGATTGGGGACGTTTG+TGG | + | chr6_3:47709291-47709310 | Msa0952720:CDS | 55.0% | |
| ! | GAGAAGGAGTACGTTCGGGA+TGG | + | chr6_3:47709467-47709486 | Msa0952720:CDS | 55.0% |
| GCACACTCAACCTTGCCACT+GGG | - | chr6_3:47709646-47709665 | None:intergenic | 55.0% | |
| TGCACACTCAACCTTGCCAC+TGG | - | chr6_3:47709647-47709666 | None:intergenic | 55.0% | |
| TGACCGCCAATCCTTCGTAG+TGG | + | chr6_3:47709800-47709819 | Msa0952720:intron | 55.0% | |
| TTGGACCAATCACCGGCATC+GGG | - | chr6_3:47710062-47710081 | None:intergenic | 55.0% | |
| CTTGGACCAATCACCGGCAT+CGG | - | chr6_3:47710063-47710082 | None:intergenic | 55.0% | |
| TGCTGGTCATAGGGTGAGCT+TGG | + | chr6_3:47710116-47710135 | Msa0952720:CDS | 55.0% | |
| TGGTTGAGGGGGATGATTGG+TGG | + | chr6_3:47710199-47710218 | Msa0952720:CDS | 55.0% | |
| !! | AGAGGTGTTGCACCCGACTT+TGG | + | chr6_3:47710243-47710262 | Msa0952720:CDS | 55.0% |
| !! | TGATTTGGTGTCGGCTGCCA+AGG | + | chr6_3:47710494-47710513 | Msa0952720:CDS | 55.0% |
| CCGAGTGGCCAGAATTTGGG+AGG | + | chr6_3:47708832-47708851 | Msa0952720:CDS | 60.0% | |
| CCCCATCCCTTAGTTTCGGC+TGG | - | chr6_3:47709125-47709144 | None:intergenic | 60.0% | |
| GGAGTACGTTCGGGATGGCA+AGG | + | chr6_3:47709472-47709491 | Msa0952720:CDS | 60.0% | |
| TGAGCAAACAGCCCCGATGC+CGG | + | chr6_3:47710047-47710066 | Msa0952720:CDS | 60.0% | |
| TGGACCAATCACCGGCATCG+GGG | - | chr6_3:47710061-47710080 | None:intergenic | 60.0% | |
| CCGAGTGGCCAGAATTTGGG+AGG | + | chr6_3:47708832-47708851 | Msa0952720:CDS | 60.0% | |
| CCCCATCCCTTAGTTTCGGC+TGG | - | chr6_3:47709125-47709144 | None:intergenic | 60.0% | |
| GGAGTACGTTCGGGATGGCA+AGG | + | chr6_3:47709472-47709491 | Msa0952720:CDS | 60.0% | |
| TGAGCAAACAGCCCCGATGC+CGG | + | chr6_3:47710047-47710066 | Msa0952720:CDS | 60.0% | |
| TGGACCAATCACCGGCATCG+GGG | - | chr6_3:47710061-47710080 | None:intergenic | 60.0% | |
| ACAGCCCCGATGCCGGTGAT+TGG | + | chr6_3:47710054-47710073 | Msa0952720:CDS | 65.0% | |
| ACAGCCCCGATGCCGGTGAT+TGG | + | chr6_3:47710054-47710073 | Msa0952720:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 47708767 | 47710746 | 47708767 | ID=Msa0952720;Name=Msa0952720 |
| chr6_3 | mRNA | 47708767 | 47710746 | 47708767 | ID=Msa0952720-mRNA-1;Parent=Msa0952720;Name=Msa0952720-mRNA-1;_AED=0.25;_eAED=0.30;_QI=0|0|0|1|0.83|1|7|0|327 |
| chr6_3 | exon | 47708767 | 47708916 | 47708767 | ID=Msa0952720-mRNA-1:exon:10471;Parent=Msa0952720-mRNA-1 |
| chr6_3 | exon | 47709023 | 47709112 | 47709023 | ID=Msa0952720-mRNA-1:exon:10472;Parent=Msa0952720-mRNA-1 |
| chr6_3 | exon | 47709237 | 47709342 | 47709237 | ID=Msa0952720-mRNA-1:exon:10473;Parent=Msa0952720-mRNA-1 |
| chr6_3 | exon | 47709435 | 47709531 | 47709435 | ID=Msa0952720-mRNA-1:exon:10474;Parent=Msa0952720-mRNA-1 |
| chr6_3 | exon | 47710029 | 47710316 | 47710029 | ID=Msa0952720-mRNA-1:exon:10475;Parent=Msa0952720-mRNA-1 |
| chr6_3 | exon | 47710398 | 47710515 | 47710398 | ID=Msa0952720-mRNA-1:exon:10476;Parent=Msa0952720-mRNA-1 |
| chr6_3 | exon | 47710612 | 47710746 | 47710612 | ID=Msa0952720-mRNA-1:exon:10477;Parent=Msa0952720-mRNA-1 |
| chr6_3 | CDS | 47708767 | 47708916 | 47708767 | ID=Msa0952720-mRNA-1:cds;Parent=Msa0952720-mRNA-1 |
| chr6_3 | CDS | 47709023 | 47709112 | 47709023 | ID=Msa0952720-mRNA-1:cds;Parent=Msa0952720-mRNA-1 |
| chr6_3 | CDS | 47709237 | 47709342 | 47709237 | ID=Msa0952720-mRNA-1:cds;Parent=Msa0952720-mRNA-1 |
| chr6_3 | CDS | 47709435 | 47709531 | 47709435 | ID=Msa0952720-mRNA-1:cds;Parent=Msa0952720-mRNA-1 |
| chr6_3 | CDS | 47710029 | 47710316 | 47710029 | ID=Msa0952720-mRNA-1:cds;Parent=Msa0952720-mRNA-1 |
| chr6_3 | CDS | 47710398 | 47710515 | 47710398 | ID=Msa0952720-mRNA-1:cds;Parent=Msa0952720-mRNA-1 |
| chr6_3 | CDS | 47710612 | 47710746 | 47710612 | ID=Msa0952720-mRNA-1:cds;Parent=Msa0952720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
