Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515800 | XP_013461366.1 | 96.825 | 126 | 4 | 0 | 1 | 126 | 1 | 126 | 6.42e-85 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515800 | sp|Q8LG89|BABL_ARATH | 54.264 | 129 | 56 | 1 | 1 | 126 | 1 | 129 | 1.49e-46 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515800 | B7FHG5 | 96.825 | 126 | 4 | 0 | 1 | 126 | 1 | 126 | 3.07e-85 | 253 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019900 | Msa0515800 | 0.810810 | 9.579438e-51 | -8.615850e-47 |
| Msa0025160 | Msa0515800 | 0.815772 | 7.787622e-52 | -8.615850e-47 |
| Msa0040790 | Msa0515800 | 0.824069 | 9.852733e-54 | -8.615850e-47 |
| Msa0044160 | Msa0515800 | 0.842158 | 3.067073e-58 | -8.615850e-47 |
| Msa0050790 | Msa0515800 | 0.802391 | 5.736809e-49 | -8.615850e-47 |
| Msa0077340 | Msa0515800 | 0.825048 | 5.796053e-54 | -8.615850e-47 |
| Msa0077560 | Msa0515800 | 0.825840 | 3.764582e-54 | -8.615850e-47 |
| Msa0081520 | Msa0515800 | 0.831592 | 1.530083e-55 | -8.615850e-47 |
| Msa0093850 | Msa0515800 | 0.831463 | 1.645848e-55 | -8.615850e-47 |
| Msa0124910 | Msa0515800 | 0.822235 | 2.639632e-53 | -8.615850e-47 |
| Msa0125360 | Msa0515800 | 0.820377 | 7.081831e-53 | -8.615850e-47 |
| Msa0127770 | Msa0515800 | 0.820819 | 5.606332e-53 | -8.615850e-47 |
| Msa0136650 | Msa0515800 | 0.804176 | 2.449330e-49 | -8.615850e-47 |
| Msa0152870 | Msa0515800 | 0.808868 | 2.507097e-50 | -8.615850e-47 |
| Msa0158860 | Msa0515800 | 0.803551 | 3.302230e-49 | -8.615850e-47 |
| Msa0173890 | Msa0515800 | 0.819256 | 1.277908e-52 | -8.615850e-47 |
| Msa0174450 | Msa0515800 | 0.839372 | 1.648014e-57 | -8.615850e-47 |
| Msa0183710 | Msa0515800 | 0.837145 | 6.178805e-57 | -8.615850e-47 |
| Msa0184500 | Msa0515800 | 0.800106 | 1.683544e-48 | -8.615850e-47 |
| Msa0189900 | Msa0515800 | 0.803037 | 4.220970e-49 | -8.615850e-47 |
| Msa0196190 | Msa0515800 | 0.843232 | 1.589820e-58 | -8.615850e-47 |
| Msa0199650 | Msa0515800 | 0.817181 | 3.766640e-52 | -8.615850e-47 |
| Msa0209140 | Msa0515800 | 0.866864 | 2.087296e-65 | -8.615850e-47 |
| Msa0221000 | Msa0515800 | 0.823533 | 1.316122e-53 | -8.615850e-47 |
| Msa0369790 | Msa0515800 | 0.822869 | 1.880899e-53 | -8.615850e-47 |
| Msa0371270 | Msa0515800 | 0.808977 | 2.375738e-50 | -8.615850e-47 |
| Msa0375640 | Msa0515800 | 0.987029 | 8.302518e-169 | -8.615850e-47 |
| Msa0378720 | Msa0515800 | 0.831264 | 1.842001e-55 | -8.615850e-47 |
| Msa0392380 | Msa0515800 | 0.809279 | 2.047207e-50 | -8.615850e-47 |
| Msa0417970 | Msa0515800 | 0.824756 | 6.791800e-54 | -8.615850e-47 |
| Msa0419540 | Msa0515800 | 0.806630 | 7.493634e-50 | -8.615850e-47 |
| Msa0423550 | Msa0515800 | 0.805890 | 1.072963e-49 | -8.615850e-47 |
| Msa0424140 | Msa0515800 | 0.907858 | 3.216268e-81 | -8.615850e-47 |
| Msa0424160 | Msa0515800 | 0.983663 | 2.320651e-158 | -8.615850e-47 |
| Msa0428370 | Msa0515800 | 0.806984 | 6.306711e-50 | -8.615850e-47 |
| Msa0430260 | Msa0515800 | 0.809942 | 1.474510e-50 | -8.615850e-47 |
| Msa0435370 | Msa0515800 | 0.836188 | 1.083334e-56 | -8.615850e-47 |
| Msa0435420 | Msa0515800 | 0.854291 | 1.357071e-61 | -8.615850e-47 |
| Msa0435570 | Msa0515800 | 0.845580 | 3.715687e-59 | -8.615850e-47 |
| Msa0437520 | Msa0515800 | 0.830788 | 2.411353e-55 | -8.615850e-47 |
| Msa0440350 | Msa0515800 | 0.804407 | 2.193014e-49 | -8.615850e-47 |
| Msa0453040 | Msa0515800 | 0.819204 | 1.313152e-52 | -8.615850e-47 |
| Msa0464000 | Msa0515800 | 0.816744 | 4.723494e-52 | -8.615850e-47 |
| Msa0465500 | Msa0515800 | 0.815709 | 8.045212e-52 | -8.615850e-47 |
| Msa0465530 | Msa0515800 | 0.811933 | 5.463010e-51 | -8.615850e-47 |
| Msa0472950 | Msa0515800 | 0.802765 | 4.802496e-49 | -8.615850e-47 |
| Msa0474730 | Msa0515800 | 0.844823 | 5.954367e-59 | -8.615850e-47 |
| Msa0241830 | Msa0515800 | 0.806185 | 9.301378e-50 | -8.615850e-47 |
| Msa0247890 | Msa0515800 | 0.812690 | 3.734390e-51 | -8.615850e-47 |
| Msa0261170 | Msa0515800 | 0.812191 | 4.800846e-51 | -8.615850e-47 |
| Msa0275770 | Msa0515800 | 0.826248 | 3.011274e-54 | -8.615850e-47 |
| Msa0276380 | Msa0515800 | 0.801626 | 8.237509e-49 | -8.615850e-47 |
| Msa0279850 | Msa0515800 | 0.808543 | 2.941130e-50 | -8.615850e-47 |
| Msa0281470 | Msa0515800 | 0.814650 | 1.382532e-51 | -8.615850e-47 |
| Msa0288620 | Msa0515800 | 0.832529 | 8.972659e-56 | -8.615850e-47 |
| Msa0305780 | Msa0515800 | 0.811454 | 6.944789e-51 | -8.615850e-47 |
| Msa0307270 | Msa0515800 | 0.901821 | 1.817948e-78 | -8.615850e-47 |
| Msa0315980 | Msa0515800 | 0.844571 | 6.960447e-59 | -8.615850e-47 |
| Msa0322900 | Msa0515800 | 0.818402 | 1.997315e-52 | -8.615850e-47 |
| Msa0326710 | Msa0515800 | 0.813068 | 3.086765e-51 | -8.615850e-47 |
| Msa0330520 | Msa0515800 | 0.830505 | 2.828667e-55 | -8.615850e-47 |
| Msa0341690 | Msa0515800 | 0.827267 | 1.719082e-54 | -8.615850e-47 |
| Msa0485240 | Msa0515800 | 0.802754 | 4.828456e-49 | -8.615850e-47 |
| Msa0495300 | Msa0515800 | 0.832715 | 8.071898e-56 | -8.615850e-47 |
| Msa0500380 | Msa0515800 | 0.802979 | 4.338555e-49 | -8.615850e-47 |
| Msa0509550 | Msa0515800 | 0.822666 | 2.096654e-53 | -8.615850e-47 |
| Msa0511440 | Msa0515800 | 0.804349 | 2.254751e-49 | -8.615850e-47 |
| Msa0515800 | Msa0517250 | 0.812251 | 4.657136e-51 | -8.615850e-47 |
| Msa0515800 | Msa0518030 | 0.817792 | 2.743893e-52 | -8.615850e-47 |
| Msa0515800 | Msa0519760 | 0.851352 | 9.385829e-61 | -8.615850e-47 |
| Msa0515800 | Msa0519810 | 0.834256 | 3.329466e-56 | -8.615850e-47 |
| Msa0515800 | Msa0519840 | 0.852690 | 3.911497e-61 | -8.615850e-47 |
| Msa0515800 | Msa0527820 | 0.818132 | 2.299580e-52 | -8.615850e-47 |
| Msa0515800 | Msa0528570 | 0.806366 | 8.520209e-50 | -8.615850e-47 |
| Msa0515800 | Msa0529030 | 0.815544 | 8.756184e-52 | -8.615850e-47 |
| Msa0515800 | Msa0571290 | 0.826419 | 2.741715e-54 | -8.615850e-47 |
| Msa0515800 | Msa0580370 | 0.812607 | 3.893557e-51 | -8.615850e-47 |
| Msa0515800 | Msa0582480 | 0.828119 | 1.073488e-54 | -8.615850e-47 |
| Msa0515800 | Msa0583360 | -0.813775 | 2.158178e-51 | -8.615850e-47 |
| Msa0515800 | Msa0586220 | 0.819088 | 1.395231e-52 | -8.615850e-47 |
| Msa0515800 | Msa0611210 | 0.800565 | 1.357595e-48 | -8.615850e-47 |
| Msa0515800 | Msa0614000 | 0.812855 | 3.435559e-51 | -8.615850e-47 |
| Msa0515800 | Msa0623900 | 0.805550 | 1.264835e-49 | -8.615850e-47 |
| Msa0515800 | Msa0623910 | 0.826667 | 2.392580e-54 | -8.615850e-47 |
| Msa0515800 | Msa0624900 | 0.806789 | 6.934728e-50 | -8.615850e-47 |
| Msa0515800 | Msa0626450 | 0.832952 | 7.047657e-56 | -8.615850e-47 |
| Msa0515800 | Msa0626490 | 0.830493 | 2.847806e-55 | -8.615850e-47 |
| Msa0515800 | Msa0638480 | 0.810181 | 1.309481e-50 | -8.615850e-47 |
| Msa0515800 | Msa0651550 | 0.804512 | 2.084537e-49 | -8.615850e-47 |
| Msa0515800 | Msa0652770 | 0.842603 | 2.337365e-58 | -8.615850e-47 |
| Msa0515800 | Msa0658640 | 0.810759 | 9.824851e-51 | -8.615850e-47 |
| Msa0515800 | Msa0664090 | 0.818970 | 1.484654e-52 | -8.615850e-47 |
| Msa0515800 | Msa0664600 | 0.830120 | 3.511496e-55 | -8.615850e-47 |
| Msa0515800 | Msa0681260 | 0.832747 | 7.923571e-56 | -8.615850e-47 |
| Msa0515800 | Msa0681280 | 0.829667 | 4.529335e-55 | -8.615850e-47 |
| Msa0515800 | Msa0692790 | 0.803364 | 3.611474e-49 | -8.615850e-47 |
| Msa0515800 | Msa0693330 | 0.865974 | 4.000411e-65 | -8.615850e-47 |
| Msa0515800 | Msa0695270 | 0.825301 | 5.049610e-54 | -8.615850e-47 |
| Msa0515800 | Msa0702720 | 0.850060 | 2.166860e-60 | -8.615850e-47 |
| Msa0515800 | Msa0703950 | 0.843614 | 1.257051e-58 | -8.615850e-47 |
| Msa0515800 | Msa0706760 | 0.804967 | 1.675291e-49 | -8.615850e-47 |
| Msa0515800 | Msa0711400 | 0.813479 | 2.507062e-51 | -8.615850e-47 |
| Msa0515800 | Msa0715060 | 0.804127 | 2.507488e-49 | -8.615850e-47 |
| Msa0515800 | Msa0723090 | 0.804500 | 2.097306e-49 | -8.615850e-47 |
| Msa0515800 | Msa0733080 | 0.802943 | 4.412574e-49 | -8.615850e-47 |
| Msa0515800 | Msa0738700 | 0.804626 | 1.973898e-49 | -8.615850e-47 |
| Msa0515800 | Msa0758030 | 0.808525 | 2.967100e-50 | -8.615850e-47 |
| Msa0515800 | Msa0768990 | 0.805329 | 1.407101e-49 | -8.615850e-47 |
| Msa0515800 | Msa0781830 | 0.813775 | 2.158351e-51 | -8.615850e-47 |
| Msa0515800 | Msa0795870 | 0.822702 | 2.056898e-53 | -8.615850e-47 |
| Msa0515800 | Msa0829330 | 0.800849 | 1.188465e-48 | -8.615850e-47 |
| Msa0515800 | Msa0833530 | 0.811757 | 5.969076e-51 | -8.615850e-47 |
| Msa0515800 | Msa0833650 | 0.812808 | 3.518760e-51 | -8.615850e-47 |
| Msa0515800 | Msa0851850 | 0.836960 | 6.886223e-57 | -8.615850e-47 |
| Msa0515800 | Msa0878280 | 0.862281 | 5.662266e-64 | -8.615850e-47 |
| Msa0515800 | Msa0945190 | 0.851938 | 6.404619e-61 | -8.615850e-47 |
| Msa0515800 | Msa0979180 | 0.815775 | 7.778796e-52 | -8.615850e-47 |
| Msa0515800 | Msa0981320 | 0.804297 | 2.311323e-49 | -8.615850e-47 |
| Msa0515800 | Msa1002350 | 0.819271 | 1.267549e-52 | -8.615850e-47 |
| Msa0515800 | Msa1020480 | 0.811577 | 6.529251e-51 | -8.615850e-47 |
| Msa0515800 | Msa1020510 | 0.809855 | 1.539365e-50 | -8.615850e-47 |
| Msa0515800 | Msa1042160 | 0.835974 | 1.227710e-56 | -8.615850e-47 |
| Msa0515800 | Msa1042190 | 0.838559 | 2.676597e-57 | -8.615850e-47 |
| Msa0515800 | Msa1072940 | 0.887285 | 1.631361e-72 | -8.615850e-47 |
| Msa0515800 | Msa1074220 | 0.839200 | 1.826472e-57 | -8.615850e-47 |
| Msa0515800 | Msa1080000 | 0.822459 | 2.342175e-53 | -8.615850e-47 |
| Msa0515800 | Msa1085330 | 0.808786 | 2.609784e-50 | -8.615850e-47 |
| Msa0515800 | Msa1106590 | 0.812021 | 5.227518e-51 | -8.615850e-47 |
| Msa0515800 | Msa1132840 | 0.811856 | 5.678638e-51 | -8.615850e-47 |
| Msa0515800 | Msa1133680 | 0.811089 | 8.333460e-51 | -8.615850e-47 |
| Msa0515800 | Msa1145580 | 0.826601 | 2.480037e-54 | -8.615850e-47 |
| Msa0515800 | Msa1160920 | 0.893680 | 5.015496e-75 | -8.615850e-47 |
| Msa0515800 | Msa1165090 | 0.802669 | 5.027624e-49 | -8.615850e-47 |
| Msa0515800 | Msa1167470 | 0.827246 | 1.739560e-54 | -8.615850e-47 |
| Msa0515800 | Msa1174840 | 0.800803 | 1.214442e-48 | -8.615850e-47 |
| Msa0515800 | Msa1200890 | 0.802414 | 5.674804e-49 | -8.615850e-47 |
| Msa0515800 | Msa1206230 | 0.809614 | 1.734292e-50 | -8.615850e-47 |
| Msa0515800 | Msa1217210 | 0.820338 | 7.230563e-53 | -8.615850e-47 |
| Msa0515800 | Msa1225860 | -0.808548 | 2.934760e-50 | -8.615850e-47 |
| Msa0515800 | Msa1226520 | 0.802539 | 5.348649e-49 | -8.615850e-47 |
| Msa0515800 | Msa1257440 | 0.807948 | 3.939231e-50 | -8.615850e-47 |
| Msa0515800 | Msa1262590 | 0.811933 | 5.462581e-51 | -8.615850e-47 |
| Msa0515800 | Msa1268240 | 0.845622 | 3.621129e-59 | -8.615850e-47 |
| Msa0515800 | Msa1277640 | 0.800919 | 1.149629e-48 | -8.615850e-47 |
| Msa0515800 | Msa1297970 | 0.809690 | 1.670085e-50 | -8.615850e-47 |
| Msa0515800 | Msa1307630 | 0.812032 | 5.198395e-51 | -8.615850e-47 |
| Msa0515800 | Msa1316330 | 0.813397 | 2.613613e-51 | -8.615850e-47 |
| Msa0515800 | Msa1341840 | 0.836879 | 7.223584e-57 | -8.615850e-47 |
| Msa0515800 | Msa1348090 | 0.827941 | 1.184650e-54 | -8.615850e-47 |
| Msa0515800 | Msa1356830 | 0.802859 | 4.592514e-49 | -8.615850e-47 |
| Msa0515800 | Msa1359690 | 0.807631 | 4.599097e-50 | -8.615850e-47 |
| Msa0515800 | Msa1371910 | 0.840275 | 9.591322e-58 | -8.615850e-47 |
| Msa0515800 | Msa1389900 | 0.833533 | 5.049499e-56 | -8.615850e-47 |
| Msa0515800 | Msa1393780 | 0.807649 | 4.559262e-50 | -8.615850e-47 |
| Msa0515800 | Msa1405460 | 0.814748 | 1.315270e-51 | -8.615850e-47 |
| Msa0515800 | Msa1407840 | 0.810985 | 8.779643e-51 | -8.615850e-47 |
| Msa0515800 | Msa1412000 | 0.848047 | 7.859042e-60 | -8.615850e-47 |
| Msa0515800 | Msa1414170 | 0.804140 | 2.492291e-49 | -8.615850e-47 |
| Msa0515800 | Msa1415540 | 0.804897 | 1.732146e-49 | -8.615850e-47 |
| Msa0515800 | Msa1418240 | 0.806048 | 9.938611e-50 | -8.615850e-47 |
| Msa0515800 | Msa1427110 | 0.838417 | 2.911606e-57 | -8.615850e-47 |
| Msa0515800 | Msa1437810 | 0.807555 | 4.774863e-50 | -8.615850e-47 |
| Msa0515800 | Msa1437940 | 0.823413 | 1.403640e-53 | -8.615850e-47 |
| Msa0515800 | Msa1440630 | 0.802515 | 5.408017e-49 | -8.615850e-47 |
| Msa0515800 | Msa1440960 | 0.829135 | 6.098168e-55 | -8.615850e-47 |
| Msa0515800 | Msa1447100 | 0.828159 | 1.049828e-54 | -8.615850e-47 |
| Msa0515800 | Msa1449900 | 0.843796 | 1.123817e-58 | -8.615850e-47 |
| Msa0515800 | Msa1449930 | 0.812528 | 4.050929e-51 | -8.615850e-47 |
| Msa0515800 | Msa1454500 | 0.814615 | 1.407936e-51 | -8.615850e-47 |
| Msa0515800 | Msa1459460 | 0.815616 | 8.439423e-52 | -8.615850e-47 |
| Msa0515800 | Msa1461370 | 0.839009 | 2.046743e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515800 | MtrunA17_Chr3g0125791 | 96.825 | 126 | 4 | 0 | 1 | 126 | 1 | 126 | 5.91e-89 | 253 |
| Msa0515800 | MtrunA17_Chr3g0125761 | 66.400 | 125 | 42 | 0 | 1 | 125 | 1 | 125 | 5.56e-61 | 183 |
| Msa0515800 | MtrunA17_Chr8g0380901 | 61.905 | 126 | 41 | 2 | 1 | 125 | 1 | 120 | 5.26e-54 | 165 |
| Msa0515800 | MtrunA17_Chr2g0301431 | 47.619 | 126 | 63 | 2 | 1 | 125 | 1 | 124 | 9.13e-40 | 129 |
| Msa0515800 | MtrunA17_Chr8g0380711 | 55.882 | 102 | 44 | 1 | 25 | 125 | 20 | 121 | 3.21e-38 | 125 |
| Msa0515800 | MtrunA17_Chr5g0394321 | 36.752 | 117 | 65 | 3 | 14 | 123 | 7 | 121 | 1.76e-21 | 84.3 |
| Msa0515800 | MtrunA17_Chr8g0335531 | 40.984 | 122 | 66 | 4 | 10 | 126 | 1 | 121 | 4.59e-21 | 83.6 |
| Msa0515800 | MtrunA17_Chr1g0177341 | 35.780 | 109 | 66 | 3 | 19 | 123 | 11 | 119 | 5.95e-19 | 77.4 |
| Msa0515800 | MtrunA17_Chr1g0177331 | 35.780 | 109 | 66 | 3 | 19 | 123 | 11 | 119 | 5.95e-19 | 77.4 |
| Msa0515800 | MtrunA17_Chr1g0205701 | 35.965 | 114 | 63 | 4 | 18 | 123 | 9 | 120 | 5.96e-19 | 78.2 |
| Msa0515800 | MtrunA17_Chr8g0335571 | 38.525 | 122 | 69 | 4 | 10 | 126 | 1 | 121 | 1.43e-18 | 77.4 |
| Msa0515800 | MtrunA17_Chr7g0253681 | 34.167 | 120 | 75 | 3 | 8 | 123 | 2 | 121 | 1.54e-18 | 76.3 |
| Msa0515800 | MtrunA17_Chr7g0253731 | 32.143 | 112 | 72 | 3 | 9 | 117 | 2 | 112 | 1.85e-18 | 76.3 |
| Msa0515800 | MtrunA17_Chr4g0064041 | 39.394 | 99 | 53 | 2 | 32 | 123 | 190 | 288 | 3.04e-18 | 79.0 |
| Msa0515800 | MtrunA17_Chr4g0064041 | 33.333 | 129 | 72 | 3 | 12 | 126 | 1 | 129 | 1.45e-15 | 71.2 |
| Msa0515800 | MtrunA17_Chr7g0253701 | 34.167 | 120 | 74 | 4 | 8 | 123 | 2 | 120 | 1.10e-17 | 74.3 |
| Msa0515800 | MtrunA17_Chr7g0253671 | 34.167 | 120 | 74 | 4 | 8 | 123 | 2 | 120 | 1.10e-17 | 74.3 |
| Msa0515800 | MtrunA17_Chr1g0211101 | 36.134 | 119 | 70 | 4 | 11 | 123 | 9 | 127 | 1.30e-17 | 74.3 |
| Msa0515800 | MtrunA17_Chr3g0132441 | 38.393 | 112 | 65 | 3 | 15 | 123 | 8 | 118 | 1.87e-17 | 74.3 |
| Msa0515800 | MtrunA17_Chr2g0306461 | 35.000 | 120 | 69 | 4 | 10 | 123 | 7 | 123 | 3.73e-17 | 73.6 |
| Msa0515800 | MtrunA17_Chr3g0132701 | 40.000 | 115 | 61 | 4 | 17 | 123 | 6 | 120 | 5.19e-17 | 73.6 |
| Msa0515800 | MtrunA17_Chr2g0323021 | 39.048 | 105 | 59 | 4 | 23 | 123 | 15 | 118 | 8.68e-17 | 73.2 |
| Msa0515800 | MtrunA17_Chr7g0253761 | 34.454 | 119 | 73 | 3 | 10 | 123 | 1 | 119 | 2.27e-16 | 71.2 |
| Msa0515800 | MtrunA17_Chr7g0253641 | 34.821 | 112 | 69 | 3 | 15 | 123 | 9 | 119 | 3.28e-16 | 71.6 |
| Msa0515800 | MtrunA17_Chr6g0459441 | 40.816 | 98 | 53 | 4 | 30 | 123 | 23 | 119 | 4.61e-16 | 70.5 |
| Msa0515800 | MtrunA17_Chr3g0132511 | 39.130 | 115 | 62 | 4 | 17 | 123 | 6 | 120 | 7.70e-16 | 70.5 |
| Msa0515800 | MtrunA17_Chr6g0483981 | 36.000 | 125 | 61 | 3 | 15 | 125 | 9 | 128 | 1.94e-15 | 71.2 |
| Msa0515800 | MtrunA17_Chr3g0132431 | 39.474 | 114 | 61 | 4 | 17 | 123 | 6 | 118 | 2.67e-15 | 68.6 |
| Msa0515800 | MtrunA17_Chr4g0033131 | 29.752 | 121 | 72 | 3 | 16 | 123 | 7 | 127 | 6.43e-15 | 67.4 |
| Msa0515800 | MtrunA17_Chr4g0033531 | 29.752 | 121 | 72 | 3 | 16 | 123 | 7 | 127 | 6.43e-15 | 67.4 |
| Msa0515800 | MtrunA17_Chr6g0481491 | 31.250 | 112 | 71 | 4 | 15 | 123 | 12 | 120 | 3.21e-14 | 66.2 |
| Msa0515800 | MtrunA17_Chr6g0453801 | 31.707 | 123 | 80 | 2 | 7 | 125 | 9 | 131 | 5.45e-14 | 64.7 |
| Msa0515800 | MtrunA17_Chr7g0253631 | 34.454 | 119 | 73 | 3 | 10 | 123 | 1 | 119 | 7.33e-14 | 65.5 |
| Msa0515800 | MtrunA17_Chr6g0453921 | 30.827 | 133 | 82 | 3 | 3 | 125 | 2 | 134 | 1.44e-13 | 63.9 |
| Msa0515800 | MtrunA17_Chr4g0001571 | 32.653 | 98 | 64 | 1 | 30 | 125 | 26 | 123 | 3.03e-13 | 62.8 |
| Msa0515800 | MtrunA17_Chr4g0041811 | 28.800 | 125 | 82 | 2 | 9 | 126 | 8 | 132 | 1.36e-12 | 62.0 |
| Msa0515800 | MtrunA17_Chr1g0196801 | 33.333 | 102 | 64 | 3 | 27 | 125 | 17 | 117 | 6.17e-12 | 59.7 |
| Msa0515800 | MtrunA17_Chr5g0440711 | 30.328 | 122 | 80 | 3 | 7 | 123 | 3 | 124 | 3.00e-11 | 57.0 |
| Msa0515800 | MtrunA17_Chr4g0064031 | 33.019 | 106 | 59 | 4 | 26 | 120 | 21 | 125 | 4.29e-11 | 57.0 |
| Msa0515800 | MtrunA17_Chr8g0387804 | 29.091 | 110 | 71 | 3 | 20 | 123 | 17 | 125 | 6.96e-11 | 55.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515800 | AT2G02850.1 | 54.264 | 129 | 56 | 1 | 1 | 126 | 1 | 129 | 1.52e-47 | 149 |
| Msa0515800 | AT1G17800.1 | 40.945 | 127 | 67 | 4 | 7 | 126 | 12 | 137 | 4.54e-27 | 98.2 |
| Msa0515800 | AT2G32300.1 | 36.885 | 122 | 73 | 3 | 8 | 126 | 2 | 122 | 4.15e-22 | 88.2 |
| Msa0515800 | AT2G32300.2 | 36.885 | 122 | 73 | 3 | 8 | 126 | 32 | 152 | 6.51e-22 | 88.2 |
| Msa0515800 | AT5G26330.1 | 32.787 | 122 | 77 | 2 | 10 | 126 | 1 | 122 | 6.91e-21 | 83.6 |
| Msa0515800 | AT3G17675.1 | 34.426 | 122 | 77 | 2 | 5 | 123 | 4 | 125 | 1.28e-20 | 81.3 |
| Msa0515800 | AT5G07475.1 | 37.838 | 111 | 62 | 4 | 19 | 123 | 13 | 122 | 1.61e-19 | 80.1 |
| Msa0515800 | AT3G60280.1 | 41.237 | 97 | 53 | 3 | 30 | 123 | 21 | 116 | 3.12e-19 | 80.1 |
| Msa0515800 | AT3G27200.1 | 35.537 | 121 | 73 | 4 | 10 | 126 | 3 | 122 | 2.05e-18 | 76.6 |
| Msa0515800 | AT2G44790.1 | 40.741 | 108 | 54 | 5 | 24 | 126 | 23 | 125 | 2.80e-17 | 74.3 |
| Msa0515800 | AT3G60270.1 | 37.113 | 97 | 57 | 3 | 30 | 123 | 23 | 118 | 9.35e-17 | 72.8 |
| Msa0515800 | AT2G25060.1 | 33.613 | 119 | 71 | 3 | 16 | 126 | 14 | 132 | 2.21e-16 | 71.6 |
| Msa0515800 | AT2G31050.1 | 33.913 | 115 | 71 | 3 | 17 | 126 | 12 | 126 | 1.43e-15 | 69.7 |
| Msa0515800 | AT2G26720.1 | 31.405 | 121 | 78 | 3 | 11 | 126 | 6 | 126 | 3.48e-15 | 68.9 |
| Msa0515800 | AT4G31840.1 | 29.134 | 127 | 82 | 3 | 8 | 126 | 2 | 128 | 5.50e-15 | 67.8 |
| Msa0515800 | AT1G72230.1 | 36.207 | 116 | 68 | 4 | 11 | 123 | 3 | 115 | 1.38e-14 | 67.0 |
| Msa0515800 | AT3G20570.1 | 30.952 | 126 | 80 | 3 | 4 | 123 | 2 | 126 | 3.93e-13 | 63.5 |
| Msa0515800 | AT5G20230.1 | 34.000 | 100 | 60 | 2 | 33 | 126 | 25 | 124 | 7.06e-13 | 62.8 |
| Msa0515800 | AT1G22480.1 | 37.931 | 116 | 63 | 5 | 12 | 123 | 1 | 111 | 1.44e-12 | 61.6 |
| Msa0515800 | AT4G30590.1 | 28.571 | 126 | 79 | 3 | 12 | 126 | 4 | 129 | 7.82e-12 | 59.7 |
| Msa0515800 | AT2G27035.1 | 32.500 | 120 | 60 | 6 | 16 | 123 | 12 | 122 | 1.28e-11 | 58.9 |
| Msa0515800 | AT5G15350.1 | 29.661 | 118 | 75 | 3 | 14 | 123 | 6 | 123 | 2.20e-11 | 58.2 |
| Msa0515800 | AT3G18590.1 | 28.926 | 121 | 73 | 6 | 13 | 123 | 7 | 124 | 3.74e-11 | 58.2 |
Find 69 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAACTTAAAATTATTTA+TGG | 0.093599 | 3_4:+67167182 | None:intergenic |
| ATGCTGTTATTTAATTTATA+TGG | 0.223296 | 3_4:+67167444 | None:intergenic |
| AAGATCCCTTTGTTTGTTTA+CGG | 0.251998 | 3_4:-67167242 | Msa0515800:three_prime_UTR |
| TTTGGTGATCAATATGTAAA+AGG | 0.277801 | 3_4:-67167393 | Msa0515800:three_prime_UTR |
| AGACTTATCCCTTTATATAA+TGG | 0.283252 | 3_4:+67168181 | None:intergenic |
| GTAGTTAATTAGTTAATTAA+TGG | 0.284468 | 3_4:-67167501 | Msa0515800:three_prime_UTR |
| ACACAATATTAAAACACTTT+TGG | 0.288556 | 3_4:-67168231 | Msa0515800:five_prime_UTR |
| CTACTAGCTATATGTTGATT+TGG | 0.303864 | 3_4:-67167411 | Msa0515800:three_prime_UTR |
| AATTAATAAAACTTCCGTTT+TGG | 0.318991 | 3_4:-67167147 | Msa0515800:three_prime_UTR |
| TCATCAATTCCATTATATAA+AGG | 0.321055 | 3_4:-67168190 | Msa0515800:five_prime_UTR |
| TATCCTGGTCACTGCCAATC+TGG | 0.329505 | 3_4:-67167578 | Msa0515800:CDS |
| GTCCTCTTGATAGCCTGATT+TGG | 0.349417 | 3_4:+67167621 | None:intergenic |
| CATCAATTCCATTATATAAA+GGG | 0.362055 | 3_4:-67168189 | Msa0515800:five_prime_UTR |
| AAAACTGATACTTGGCCTAA+TGG | 0.367231 | 3_4:-67167949 | Msa0515800:CDS |
| GGTGCTAAAGTGTTCAGTTC+AGG | 0.375248 | 3_4:-67167650 | Msa0515800:CDS |
| CATATTCTCACTATTTCTCT+TGG | 0.410921 | 3_4:+67168098 | None:intergenic |
| AGAGGACTAAACTGCATAGA+TGG | 0.414690 | 3_4:+67167544 | None:intergenic |
| CATCTCACTAGAATTGCTAT+AGG | 0.429228 | 3_4:-67168136 | Msa0515800:five_prime_UTR |
| GTTCAGGGAGTGACCAAATC+AGG | 0.435888 | 3_4:-67167634 | Msa0515800:CDS |
| TCTTACACCGTTGGAGGACC+TGG | 0.442628 | 3_4:-67167985 | Msa0515800:CDS |
| TAAATAACAGCATGAGTACT+AGG | 0.453436 | 3_4:-67167434 | Msa0515800:three_prime_UTR |
| TTCTAGTGAGATGGTTGAGT+TGG | 0.453959 | 3_4:+67168146 | None:intergenic |
| GATGGTTGAGTTGGTTTGCA+AGG | 0.474704 | 3_4:+67168155 | None:intergenic |
| CACTTTCAGCCAGAAACAAA+AGG | 0.476546 | 3_4:+67168019 | None:intergenic |
| TACTTCATATGCAGCTATCC+TGG | 0.480047 | 3_4:-67167593 | Msa0515800:CDS |
| GAGAATATGACTGAGGGAAG+AGG | 0.490305 | 3_4:-67168084 | Msa0515800:exon |
| ATCCTGGTCACTGCCAATCT+GGG | 0.503016 | 3_4:-67167577 | Msa0515800:CDS |
| TGATGAATCTGTTGAGCTAT+GGG | 0.512228 | 3_4:+67168207 | None:intergenic |
| GTGCTAAAGTGTTCAGTTCA+GGG | 0.512300 | 3_4:-67167649 | Msa0515800:CDS |
| TTGATGAATCTGTTGAGCTA+TGG | 0.522374 | 3_4:+67168206 | None:intergenic |
| ATCCCAGATTGGCAGTGACC+AGG | 0.530524 | 3_4:+67167575 | None:intergenic |
| TAATGGTCAATTAGCTGTAG+TGG | 0.537805 | 3_4:-67167484 | Msa0515800:three_prime_UTR |
| TGGATCTCACAAGCAGGGAT+AGG | 0.539471 | 3_4:+67168267 | None:intergenic |
| GGACATACAAAACTGATACT+TGG | 0.540585 | 3_4:-67167957 | Msa0515800:CDS |
| TGGAAACCTTCATCCCAGAT+TGG | 0.543764 | 3_4:+67167564 | None:intergenic |
| TCACTGCCAATCTGGGATGA+AGG | 0.545313 | 3_4:-67167570 | Msa0515800:CDS |
| CTTAGACCGTAAACAAACAA+AGG | 0.558115 | 3_4:+67167236 | None:intergenic |
| TTAGACCGTAAACAAACAAA+GGG | 0.559350 | 3_4:+67167237 | None:intergenic |
| TTGGATGCTACTCACTAGCT+AGG | 0.563622 | 3_4:+67168355 | None:intergenic |
| TCTCACAAGCAGGGATAGGA+TGG | 0.569707 | 3_4:+67168271 | None:intergenic |
| GCAGCATCTTACACCGTTGG+AGG | 0.574303 | 3_4:-67167991 | Msa0515800:CDS |
| CTATAGCAATTCTAGTGAGA+TGG | 0.575116 | 3_4:+67168137 | None:intergenic |
| GTGGTTGCCGTGGACAAAAG+TGG | 0.576000 | 3_4:-67167698 | Msa0515800:CDS |
| CTGAACACTTTAGCACCTCC+CGG | 0.578857 | 3_4:+67167656 | None:intergenic |
| AATGCAGCATCTTACACCGT+TGG | 0.578987 | 3_4:-67167994 | Msa0515800:CDS |
| CACACACAATGTGGTTGCCG+TGG | 0.585202 | 3_4:-67167708 | Msa0515800:CDS |
| AATAGTGAGAATATGACTGA+GGG | 0.586297 | 3_4:-67168090 | Msa0515800:exon |
| CTTACACCGTTGGAGGACCT+GGG | 0.588429 | 3_4:-67167984 | Msa0515800:CDS |
| GAAAATCTGAGGGACCAAAA+CGG | 0.589382 | 3_4:+67167133 | None:intergenic |
| AAATAGTGAGAATATGACTG+AGG | 0.592419 | 3_4:-67168091 | Msa0515800:exon |
| ATCAATATGTAAAAGGAGTG+TGG | 0.597954 | 3_4:-67167386 | Msa0515800:three_prime_UTR |
| ATATTGTGGATCTCACAAGC+AGG | 0.598727 | 3_4:+67168261 | None:intergenic |
| AAGGGAGAGGATGGTAATGT+CGG | 0.599256 | 3_4:-67168380 | Msa0515800:five_prime_UTR |
| TAGTCAAGTCACGTAGCTAG+AGG | 0.615737 | 3_4:+67167526 | None:intergenic |
| GTAAAAGGAGTGTGGTGAGG+TGG | 0.622991 | 3_4:-67167378 | Msa0515800:three_prime_UTR |
| TACAACAACTGTAAGACACC+GGG | 0.625426 | 3_4:-67167674 | Msa0515800:CDS |
| CACAAGCAGGGATAGGATGG+TGG | 0.631040 | 3_4:+67168274 | None:intergenic |
| TTACACCGTTGGAGGACCTG+GGG | 0.632787 | 3_4:-67167983 | Msa0515800:CDS |
| CACGGCAACCACATTGTGTG+TGG | 0.635175 | 3_4:+67167709 | None:intergenic |
| TATTGTGGATCTCACAAGCA+GGG | 0.635490 | 3_4:+67168262 | None:intergenic |
| AGGCAGTGCATCTATGAACA+TGG | 0.647845 | 3_4:-67168064 | Msa0515800:CDS |
| ATTGTGTAGATTGAATATTG+TGG | 0.652337 | 3_4:+67168247 | None:intergenic |
| GACCAAATCAGGCTATCAAG+AGG | 0.658515 | 3_4:-67167623 | Msa0515800:CDS |
| TGATTCAACCACACACAATG+TGG | 0.661122 | 3_4:-67167717 | Msa0515800:CDS |
| ATACAACAACTGTAAGACAC+CGG | 0.661265 | 3_4:-67167675 | Msa0515800:CDS |
| TACACCGTTGGAGGACCTGG+GGG | 0.694377 | 3_4:-67167982 | Msa0515800:CDS |
| TATGTAAAAGGAGTGTGGTG+AGG | 0.701233 | 3_4:-67167381 | Msa0515800:three_prime_UTR |
| AACAACTGTAAGACACCGGG+AGG | 0.711932 | 3_4:-67167671 | Msa0515800:CDS |
| GATGAATCTGTTGAGCTATG+GGG | 0.740755 | 3_4:+67168208 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAACTTAAAATTATTTA+TGG | + | chr3_4:67168355-67168374 | None:intergenic | 10.0% |
| !!! | ATAATTTTAAGTTTTCATTT+TGG | - | chr3_4:67168358-67168377 | Msa0515800:five_prime_UTR | 10.0% |
| !! | TGAAAACTTAAAATTATTTA+TGG | + | chr3_4:67168355-67168374 | None:intergenic | 10.0% |
| !!! | ATAATTTTAAGTTTTCATTT+TGG | - | chr3_4:67168358-67168377 | Msa0515800:five_prime_UTR | 10.0% |
| !! | TAATTTAATTACAGTACAAT+TGG | - | chr3_4:67167677-67167696 | Msa0515800:CDS | 15.0% |
| !! | AATTTAATTACAGTACAATT+GGG | - | chr3_4:67167678-67167697 | Msa0515800:CDS | 15.0% |
| !!! | AAAATTGAGAAATATAGTTT+TGG | + | chr3_4:67167717-67167736 | None:intergenic | 15.0% |
| !!! | TCAATTTTACAAAATTGTTT+TGG | - | chr3_4:67167729-67167748 | Msa0515800:CDS | 15.0% |
| !! | GTAGTTAATTAGTTAATTAA+TGG | - | chr3_4:67168033-67168052 | Msa0515800:CDS | 15.0% |
| !!! | ATGCTGTTATTTAATTTATA+TGG | + | chr3_4:67168093-67168112 | None:intergenic | 15.0% |
| !! | TAATTTAATTACAGTACAAT+TGG | - | chr3_4:67167677-67167696 | Msa0515800:CDS | 15.0% |
| !! | AATTTAATTACAGTACAATT+GGG | - | chr3_4:67167678-67167697 | Msa0515800:CDS | 15.0% |
| !!! | AAAATTGAGAAATATAGTTT+TGG | + | chr3_4:67167717-67167736 | None:intergenic | 15.0% |
| !!! | TCAATTTTACAAAATTGTTT+TGG | - | chr3_4:67167729-67167748 | Msa0515800:CDS | 15.0% |
| !! | GTAGTTAATTAGTTAATTAA+TGG | - | chr3_4:67168033-67168052 | Msa0515800:CDS | 15.0% |
| !!! | ATGCTGTTATTTAATTTATA+TGG | + | chr3_4:67168093-67168112 | None:intergenic | 15.0% |
| !!! | ACACAATATTAAAACACTTT+TGG | - | chr3_4:67167303-67167322 | Msa0515800:three_prime_UTR | 20.0% |
| !! | TCATCAATTCCATTATATAA+AGG | - | chr3_4:67167344-67167363 | Msa0515800:three_prime_UTR | 20.0% |
| !! | CATCAATTCCATTATATAAA+GGG | - | chr3_4:67167345-67167364 | Msa0515800:three_prime_UTR | 20.0% |
| !! | ACTTTAATTATATGTGCATA+TGG | - | chr3_4:67167768-67167787 | Msa0515800:intron | 20.0% |
| !!! | TTTTGGTTTATTTGATTCAT+TGG | - | chr3_4:67168327-67168346 | Msa0515800:five_prime_UTR | 20.0% |
| !!! | AATTAATAAAACTTCCGTTT+TGG | - | chr3_4:67168387-67168406 | Msa0515800:five_prime_UTR | 20.0% |
| !!! | ACACAATATTAAAACACTTT+TGG | - | chr3_4:67167303-67167322 | Msa0515800:three_prime_UTR | 20.0% |
| !! | TCATCAATTCCATTATATAA+AGG | - | chr3_4:67167344-67167363 | Msa0515800:three_prime_UTR | 20.0% |
| !! | CATCAATTCCATTATATAAA+GGG | - | chr3_4:67167345-67167364 | Msa0515800:three_prime_UTR | 20.0% |
| !! | ACTTTAATTATATGTGCATA+TGG | - | chr3_4:67167768-67167787 | Msa0515800:intron | 20.0% |
| !!! | TTTTGGTTTATTTGATTCAT+TGG | - | chr3_4:67168327-67168346 | Msa0515800:five_prime_UTR | 20.0% |
| !!! | AATTAATAAAACTTCCGTTT+TGG | - | chr3_4:67168387-67168406 | Msa0515800:five_prime_UTR | 20.0% |
| ! | ATTGTGTAGATTGAATATTG+TGG | + | chr3_4:67167290-67167309 | None:intergenic | 25.0% |
| ! | AGACTTATCCCTTTATATAA+TGG | + | chr3_4:67167356-67167375 | None:intergenic | 25.0% |
| !!! | GCTTTAAACTTTTTTCCATT+AGG | + | chr3_4:67167603-67167622 | None:intergenic | 25.0% |
| !! | AATGGAAAAAAGTTTAAAGC+TGG | - | chr3_4:67167603-67167622 | Msa0515800:CDS | 25.0% |
| !! | TTTGGTGATCAATATGTAAA+AGG | - | chr3_4:67168141-67168160 | Msa0515800:five_prime_UTR | 25.0% |
| !!! | TACGGTCTAAGTTTTTATTT+TGG | - | chr3_4:67168310-67168329 | Msa0515800:five_prime_UTR | 25.0% |
| !!! | ACGGAAGTTTTATTAATTGT+GGG | + | chr3_4:67168385-67168404 | None:intergenic | 25.0% |
| !!! | AACGGAAGTTTTATTAATTG+TGG | + | chr3_4:67168386-67168405 | None:intergenic | 25.0% |
| ! | ATTGTGTAGATTGAATATTG+TGG | + | chr3_4:67167290-67167309 | None:intergenic | 25.0% |
| ! | AGACTTATCCCTTTATATAA+TGG | + | chr3_4:67167356-67167375 | None:intergenic | 25.0% |
| !!! | GCTTTAAACTTTTTTCCATT+AGG | + | chr3_4:67167603-67167622 | None:intergenic | 25.0% |
| !! | AATGGAAAAAAGTTTAAAGC+TGG | - | chr3_4:67167603-67167622 | Msa0515800:CDS | 25.0% |
| !! | TTTGGTGATCAATATGTAAA+AGG | - | chr3_4:67168141-67168160 | Msa0515800:five_prime_UTR | 25.0% |
| !!! | TACGGTCTAAGTTTTTATTT+TGG | - | chr3_4:67168310-67168329 | Msa0515800:five_prime_UTR | 25.0% |
| !!! | ACGGAAGTTTTATTAATTGT+GGG | + | chr3_4:67168385-67168404 | None:intergenic | 25.0% |
| !!! | AACGGAAGTTTTATTAATTG+TGG | + | chr3_4:67168386-67168405 | None:intergenic | 25.0% |
| ! | TGGCTTTTCTTCATTAGTTA+AGG | + | chr3_4:67167243-67167262 | None:intergenic | 30.0% |
| ! | CATATTCTCACTATTTCTCT+TGG | + | chr3_4:67167439-67167458 | None:intergenic | 30.0% |
| AAATAGTGAGAATATGACTG+AGG | - | chr3_4:67167443-67167462 | Msa0515800:three_prime_UTR | 30.0% | |
| AATAGTGAGAATATGACTGA+GGG | - | chr3_4:67167444-67167463 | Msa0515800:three_prime_UTR | 30.0% | |
| ATATGGTAATTGATTGTTGC+AGG | - | chr3_4:67167785-67167804 | Msa0515800:intron | 30.0% | |
| TAAATAACAGCATGAGTACT+AGG | - | chr3_4:67168100-67168119 | Msa0515800:exon | 30.0% | |
| ! | CTACTAGCTATATGTTGATT+TGG | - | chr3_4:67168123-67168142 | Msa0515800:five_prime_UTR | 30.0% |
| ATCAATATGTAAAAGGAGTG+TGG | - | chr3_4:67168148-67168167 | Msa0515800:five_prime_UTR | 30.0% | |
| ! | AAGATCCCTTTGTTTGTTTA+CGG | - | chr3_4:67168292-67168311 | Msa0515800:five_prime_UTR | 30.0% |
| TTAGACCGTAAACAAACAAA+GGG | + | chr3_4:67168300-67168319 | None:intergenic | 30.0% | |
| !!! | CTCTCCCTTTTTTTTCTTTT+GGG | + | chr3_4:67167143-67167162 | None:intergenic | 30.0% |
| ! | TGGCTTTTCTTCATTAGTTA+AGG | + | chr3_4:67167243-67167262 | None:intergenic | 30.0% |
| ! | CATATTCTCACTATTTCTCT+TGG | + | chr3_4:67167439-67167458 | None:intergenic | 30.0% |
| AAATAGTGAGAATATGACTG+AGG | - | chr3_4:67167443-67167462 | Msa0515800:three_prime_UTR | 30.0% | |
| AATAGTGAGAATATGACTGA+GGG | - | chr3_4:67167444-67167463 | Msa0515800:three_prime_UTR | 30.0% | |
| ATATGGTAATTGATTGTTGC+AGG | - | chr3_4:67167785-67167804 | Msa0515800:intron | 30.0% | |
| TAAATAACAGCATGAGTACT+AGG | - | chr3_4:67168100-67168119 | Msa0515800:exon | 30.0% | |
| ! | CTACTAGCTATATGTTGATT+TGG | - | chr3_4:67168123-67168142 | Msa0515800:five_prime_UTR | 30.0% |
| ATCAATATGTAAAAGGAGTG+TGG | - | chr3_4:67168148-67168167 | Msa0515800:five_prime_UTR | 30.0% | |
| ! | AAGATCCCTTTGTTTGTTTA+CGG | - | chr3_4:67168292-67168311 | Msa0515800:five_prime_UTR | 30.0% |
| TTAGACCGTAAACAAACAAA+GGG | + | chr3_4:67168300-67168319 | None:intergenic | 30.0% | |
| AAGAAAAAAAAGGGAGAGGA+TGG | - | chr3_4:67167145-67167164 | Msa0515800:three_prime_UTR | 35.0% | |
| TGATGAATCTGTTGAGCTAT+GGG | + | chr3_4:67167330-67167349 | None:intergenic | 35.0% | |
| TTGATGAATCTGTTGAGCTA+TGG | + | chr3_4:67167331-67167350 | None:intergenic | 35.0% | |
| CTATAGCAATTCTAGTGAGA+TGG | + | chr3_4:67167400-67167419 | None:intergenic | 35.0% | |
| CATCTCACTAGAATTGCTAT+AGG | - | chr3_4:67167398-67167417 | Msa0515800:three_prime_UTR | 35.0% | |
| GGACATACAAAACTGATACT+TGG | - | chr3_4:67167577-67167596 | Msa0515800:CDS | 35.0% | |
| AAAACTGATACTTGGCCTAA+TGG | - | chr3_4:67167585-67167604 | Msa0515800:CDS | 35.0% | |
| ATACAACAACTGTAAGACAC+CGG | - | chr3_4:67167859-67167878 | Msa0515800:intron | 35.0% | |
| TAATGGTCAATTAGCTGTAG+TGG | - | chr3_4:67168050-67168069 | Msa0515800:CDS | 35.0% | |
| CTTAGACCGTAAACAAACAA+AGG | + | chr3_4:67168301-67168320 | None:intergenic | 35.0% | |
| !!! | CCTCTCCCTTTTTTTTCTTT+TGG | + | chr3_4:67167144-67167163 | None:intergenic | 35.0% |
| AAGAAAAAAAAGGGAGAGGA+TGG | - | chr3_4:67167145-67167164 | Msa0515800:three_prime_UTR | 35.0% | |
| TGATGAATCTGTTGAGCTAT+GGG | + | chr3_4:67167330-67167349 | None:intergenic | 35.0% | |
| TTGATGAATCTGTTGAGCTA+TGG | + | chr3_4:67167331-67167350 | None:intergenic | 35.0% | |
| CTATAGCAATTCTAGTGAGA+TGG | + | chr3_4:67167400-67167419 | None:intergenic | 35.0% | |
| CATCTCACTAGAATTGCTAT+AGG | - | chr3_4:67167398-67167417 | Msa0515800:three_prime_UTR | 35.0% | |
| GGACATACAAAACTGATACT+TGG | - | chr3_4:67167577-67167596 | Msa0515800:CDS | 35.0% | |
| AAAACTGATACTTGGCCTAA+TGG | - | chr3_4:67167585-67167604 | Msa0515800:CDS | 35.0% | |
| ATACAACAACTGTAAGACAC+CGG | - | chr3_4:67167859-67167878 | Msa0515800:intron | 35.0% | |
| TAATGGTCAATTAGCTGTAG+TGG | - | chr3_4:67168050-67168069 | Msa0515800:CDS | 35.0% | |
| CTTAGACCGTAAACAAACAA+AGG | + | chr3_4:67168301-67168320 | None:intergenic | 35.0% | |
| TATTGTGGATCTCACAAGCA+GGG | + | chr3_4:67167275-67167294 | None:intergenic | 40.0% | |
| ATATTGTGGATCTCACAAGC+AGG | + | chr3_4:67167276-67167295 | None:intergenic | 40.0% | |
| GATGAATCTGTTGAGCTATG+GGG | + | chr3_4:67167329-67167348 | None:intergenic | 40.0% | |
| TTCTAGTGAGATGGTTGAGT+TGG | + | chr3_4:67167391-67167410 | None:intergenic | 40.0% | |
| CACTTTCAGCCAGAAACAAA+AGG | + | chr3_4:67167518-67167537 | None:intergenic | 40.0% | |
| TGATTCAACCACACACAATG+TGG | - | chr3_4:67167817-67167836 | Msa0515800:intron | 40.0% | |
| !! | GTTGTATCCACTTTTGTCCA+CGG | + | chr3_4:67167846-67167865 | None:intergenic | 40.0% |
| TACAACAACTGTAAGACACC+GGG | - | chr3_4:67167860-67167879 | Msa0515800:intron | 40.0% | |
| ! | GTGCTAAAGTGTTCAGTTCA+GGG | - | chr3_4:67167885-67167904 | Msa0515800:intron | 40.0% |
| TACTTCATATGCAGCTATCC+TGG | - | chr3_4:67167941-67167960 | Msa0515800:CDS | 40.0% | |
| AGAGGACTAAACTGCATAGA+TGG | + | chr3_4:67167993-67168012 | None:intergenic | 40.0% | |
| ! | TATGTAAAAGGAGTGTGGTG+AGG | - | chr3_4:67168153-67168172 | Msa0515800:five_prime_UTR | 40.0% |
| TATTGTGGATCTCACAAGCA+GGG | + | chr3_4:67167275-67167294 | None:intergenic | 40.0% | |
| ATATTGTGGATCTCACAAGC+AGG | + | chr3_4:67167276-67167295 | None:intergenic | 40.0% | |
| GATGAATCTGTTGAGCTATG+GGG | + | chr3_4:67167329-67167348 | None:intergenic | 40.0% | |
| TTCTAGTGAGATGGTTGAGT+TGG | + | chr3_4:67167391-67167410 | None:intergenic | 40.0% | |
| CACTTTCAGCCAGAAACAAA+AGG | + | chr3_4:67167518-67167537 | None:intergenic | 40.0% | |
| TGATTCAACCACACACAATG+TGG | - | chr3_4:67167817-67167836 | Msa0515800:intron | 40.0% | |
| !! | GTTGTATCCACTTTTGTCCA+CGG | + | chr3_4:67167846-67167865 | None:intergenic | 40.0% |
| TACAACAACTGTAAGACACC+GGG | - | chr3_4:67167860-67167879 | Msa0515800:intron | 40.0% | |
| ! | GTGCTAAAGTGTTCAGTTCA+GGG | - | chr3_4:67167885-67167904 | Msa0515800:intron | 40.0% |
| TACTTCATATGCAGCTATCC+TGG | - | chr3_4:67167941-67167960 | Msa0515800:CDS | 40.0% | |
| AGAGGACTAAACTGCATAGA+TGG | + | chr3_4:67167993-67168012 | None:intergenic | 40.0% | |
| ! | TATGTAAAAGGAGTGTGGTG+AGG | - | chr3_4:67168153-67168172 | Msa0515800:five_prime_UTR | 40.0% |
| ! | AAGGGAGAGGATGGTAATGT+CGG | - | chr3_4:67167154-67167173 | Msa0515800:three_prime_UTR | 45.0% |
| TTGGATGCTACTCACTAGCT+AGG | + | chr3_4:67167182-67167201 | None:intergenic | 45.0% | |
| !! | GATGGTTGAGTTGGTTTGCA+AGG | + | chr3_4:67167382-67167401 | None:intergenic | 45.0% |
| GAGAATATGACTGAGGGAAG+AGG | - | chr3_4:67167450-67167469 | Msa0515800:three_prime_UTR | 45.0% | |
| AGGCAGTGCATCTATGAACA+TGG | - | chr3_4:67167470-67167489 | Msa0515800:three_prime_UTR | 45.0% | |
| !! | ACTGCTGTGCCTTTTGTTTC+TGG | - | chr3_4:67167506-67167525 | Msa0515800:three_prime_UTR | 45.0% |
| AATGCAGCATCTTACACCGT+TGG | - | chr3_4:67167540-67167559 | Msa0515800:exon | 45.0% | |
| ! | GGTGCTAAAGTGTTCAGTTC+AGG | - | chr3_4:67167884-67167903 | Msa0515800:intron | 45.0% |
| GACCAAATCAGGCTATCAAG+AGG | - | chr3_4:67167911-67167930 | Msa0515800:intron | 45.0% | |
| ! | GTCCTCTTGATAGCCTGATT+TGG | + | chr3_4:67167916-67167935 | None:intergenic | 45.0% |
| TGGAAACCTTCATCCCAGAT+TGG | + | chr3_4:67167973-67167992 | None:intergenic | 45.0% | |
| TAGTCAAGTCACGTAGCTAG+AGG | + | chr3_4:67168011-67168030 | None:intergenic | 45.0% | |
| ! | TTTTTGTCGTGTGCTGTGTG+AGG | - | chr3_4:67168213-67168232 | Msa0515800:five_prime_UTR | 45.0% |
| ! | AAGGGAGAGGATGGTAATGT+CGG | - | chr3_4:67167154-67167173 | Msa0515800:three_prime_UTR | 45.0% |
| TTGGATGCTACTCACTAGCT+AGG | + | chr3_4:67167182-67167201 | None:intergenic | 45.0% | |
| !! | GATGGTTGAGTTGGTTTGCA+AGG | + | chr3_4:67167382-67167401 | None:intergenic | 45.0% |
| GAGAATATGACTGAGGGAAG+AGG | - | chr3_4:67167450-67167469 | Msa0515800:three_prime_UTR | 45.0% | |
| AGGCAGTGCATCTATGAACA+TGG | - | chr3_4:67167470-67167489 | Msa0515800:three_prime_UTR | 45.0% | |
| !! | ACTGCTGTGCCTTTTGTTTC+TGG | - | chr3_4:67167506-67167525 | Msa0515800:three_prime_UTR | 45.0% |
| AATGCAGCATCTTACACCGT+TGG | - | chr3_4:67167540-67167559 | Msa0515800:exon | 45.0% | |
| ! | GGTGCTAAAGTGTTCAGTTC+AGG | - | chr3_4:67167884-67167903 | Msa0515800:intron | 45.0% |
| GACCAAATCAGGCTATCAAG+AGG | - | chr3_4:67167911-67167930 | Msa0515800:intron | 45.0% | |
| ! | GTCCTCTTGATAGCCTGATT+TGG | + | chr3_4:67167916-67167935 | None:intergenic | 45.0% |
| TGGAAACCTTCATCCCAGAT+TGG | + | chr3_4:67167973-67167992 | None:intergenic | 45.0% | |
| TAGTCAAGTCACGTAGCTAG+AGG | + | chr3_4:67168011-67168030 | None:intergenic | 45.0% | |
| ! | TTTTTGTCGTGTGCTGTGTG+AGG | - | chr3_4:67168213-67168232 | Msa0515800:five_prime_UTR | 45.0% |
| !!! | TTTTTTTTTTTTTTTAAAGT+TGG | + | chr3_4:67167201-67167220 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTAAAGT+TGG | + | chr3_4:67167201-67167220 | None:intergenic | 5.0% |
| TCTCACAAGCAGGGATAGGA+TGG | + | chr3_4:67167266-67167285 | None:intergenic | 50.0% | |
| TGGATCTCACAAGCAGGGAT+AGG | + | chr3_4:67167270-67167289 | None:intergenic | 50.0% | |
| ! | GTTTTGTATGTCCATCCCCC+AGG | + | chr3_4:67167570-67167589 | None:intergenic | 50.0% |
| AACAACTGTAAGACACCGGG+AGG | - | chr3_4:67167863-67167882 | Msa0515800:intron | 50.0% | |
| CTGAACACTTTAGCACCTCC+CGG | + | chr3_4:67167881-67167900 | None:intergenic | 50.0% | |
| GTTCAGGGAGTGACCAAATC+AGG | - | chr3_4:67167900-67167919 | Msa0515800:intron | 50.0% | |
| TATCCTGGTCACTGCCAATC+TGG | - | chr3_4:67167956-67167975 | Msa0515800:CDS | 50.0% | |
| ATCCTGGTCACTGCCAATCT+GGG | - | chr3_4:67167957-67167976 | Msa0515800:CDS | 50.0% | |
| ! | TCACTGCCAATCTGGGATGA+AGG | - | chr3_4:67167964-67167983 | Msa0515800:CDS | 50.0% |
| ! | GTAAAAGGAGTGTGGTGAGG+TGG | - | chr3_4:67168156-67168175 | Msa0515800:five_prime_UTR | 50.0% |
| TCTCACAAGCAGGGATAGGA+TGG | + | chr3_4:67167266-67167285 | None:intergenic | 50.0% | |
| TGGATCTCACAAGCAGGGAT+AGG | + | chr3_4:67167270-67167289 | None:intergenic | 50.0% | |
| ! | GTTTTGTATGTCCATCCCCC+AGG | + | chr3_4:67167570-67167589 | None:intergenic | 50.0% |
| AACAACTGTAAGACACCGGG+AGG | - | chr3_4:67167863-67167882 | Msa0515800:intron | 50.0% | |
| CTGAACACTTTAGCACCTCC+CGG | + | chr3_4:67167881-67167900 | None:intergenic | 50.0% | |
| GTTCAGGGAGTGACCAAATC+AGG | - | chr3_4:67167900-67167919 | Msa0515800:intron | 50.0% | |
| TATCCTGGTCACTGCCAATC+TGG | - | chr3_4:67167956-67167975 | Msa0515800:CDS | 50.0% | |
| ATCCTGGTCACTGCCAATCT+GGG | - | chr3_4:67167957-67167976 | Msa0515800:CDS | 50.0% | |
| ! | TCACTGCCAATCTGGGATGA+AGG | - | chr3_4:67167964-67167983 | Msa0515800:CDS | 50.0% |
| ! | GTAAAAGGAGTGTGGTGAGG+TGG | - | chr3_4:67168156-67168175 | Msa0515800:five_prime_UTR | 50.0% |
| CACAAGCAGGGATAGGATGG+TGG | + | chr3_4:67167263-67167282 | None:intergenic | 55.0% | |
| GCAGCATCTTACACCGTTGG+AGG | - | chr3_4:67167543-67167562 | Msa0515800:exon | 55.0% | |
| TCTTACACCGTTGGAGGACC+TGG | - | chr3_4:67167549-67167568 | Msa0515800:exon | 55.0% | |
| CTTACACCGTTGGAGGACCT+GGG | - | chr3_4:67167550-67167569 | Msa0515800:CDS | 55.0% | |
| TTACACCGTTGGAGGACCTG+GGG | - | chr3_4:67167551-67167570 | Msa0515800:CDS | 55.0% | |
| CACGGCAACCACATTGTGTG+TGG | + | chr3_4:67167828-67167847 | None:intergenic | 55.0% | |
| CACACACAATGTGGTTGCCG+TGG | - | chr3_4:67167826-67167845 | Msa0515800:intron | 55.0% | |
| GTGGTTGCCGTGGACAAAAG+TGG | - | chr3_4:67167836-67167855 | Msa0515800:intron | 55.0% | |
| ATCCCAGATTGGCAGTGACC+AGG | + | chr3_4:67167962-67167981 | None:intergenic | 55.0% | |
| CACAAGCAGGGATAGGATGG+TGG | + | chr3_4:67167263-67167282 | None:intergenic | 55.0% | |
| GCAGCATCTTACACCGTTGG+AGG | - | chr3_4:67167543-67167562 | Msa0515800:exon | 55.0% | |
| TCTTACACCGTTGGAGGACC+TGG | - | chr3_4:67167549-67167568 | Msa0515800:exon | 55.0% | |
| CTTACACCGTTGGAGGACCT+GGG | - | chr3_4:67167550-67167569 | Msa0515800:CDS | 55.0% | |
| TTACACCGTTGGAGGACCTG+GGG | - | chr3_4:67167551-67167570 | Msa0515800:CDS | 55.0% | |
| CACGGCAACCACATTGTGTG+TGG | + | chr3_4:67167828-67167847 | None:intergenic | 55.0% | |
| CACACACAATGTGGTTGCCG+TGG | - | chr3_4:67167826-67167845 | Msa0515800:intron | 55.0% | |
| GTGGTTGCCGTGGACAAAAG+TGG | - | chr3_4:67167836-67167855 | Msa0515800:intron | 55.0% | |
| ATCCCAGATTGGCAGTGACC+AGG | + | chr3_4:67167962-67167981 | None:intergenic | 55.0% | |
| TACACCGTTGGAGGACCTGG+GGG | - | chr3_4:67167552-67167571 | Msa0515800:CDS | 60.0% | |
| TACACCGTTGGAGGACCTGG+GGG | - | chr3_4:67167552-67167571 | Msa0515800:CDS | 60.0% | |
| CCATCCCCCAGGTCCTCCAA+CGG | + | chr3_4:67167559-67167578 | None:intergenic | 65.0% | |
| CCATCCCCCAGGTCCTCCAA+CGG | + | chr3_4:67167559-67167578 | None:intergenic | 65.0% | |
| CCGTTGGAGGACCTGGGGGA+TGG | - | chr3_4:67167556-67167575 | Msa0515800:CDS | 70.0% | |
| CCGTTGGAGGACCTGGGGGA+TGG | - | chr3_4:67167556-67167575 | Msa0515800:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 67167143 | 67168413 | 67167143 | ID=Msa0515800;Name=Msa0515800 |
| chr3_4 | mRNA | 67167143 | 67168413 | 67167143 | ID=Msa0515800-mRNA-1;Parent=Msa0515800;Name=Msa0515800-mRNA-1;_AED=0.01;_eAED=0.01;_QI=313|1|1|1|1|1|2|407|126 |
| chr3_4 | exon | 67167143 | 67167749 | 67167143 | ID=Msa0515800-mRNA-1:exon:17464;Parent=Msa0515800-mRNA-1 |
| chr3_4 | exon | 67167920 | 67168413 | 67167920 | ID=Msa0515800-mRNA-1:exon:17463;Parent=Msa0515800-mRNA-1 |
| chr3_4 | five_prime_UTR | 67168101 | 67168413 | 67168101 | ID=Msa0515800-mRNA-1:five_prime_utr;Parent=Msa0515800-mRNA-1 |
| chr3_4 | CDS | 67167920 | 67168100 | 67167920 | ID=Msa0515800-mRNA-1:cds;Parent=Msa0515800-mRNA-1 |
| chr3_4 | CDS | 67167550 | 67167749 | 67167550 | ID=Msa0515800-mRNA-1:cds;Parent=Msa0515800-mRNA-1 |
| chr3_4 | three_prime_UTR | 67167143 | 67167549 | 67167143 | ID=Msa0515800-mRNA-1:three_prime_utr;Parent=Msa0515800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
