AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0677530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0677530 MtrunA17_Chr4g0022171 100.000 470 0 0 1 470 1 470 0.0 972
Msa0677530 MtrunA17_Chr2g0324061 80.084 477 81 6 1 470 1 470 0.0 736
Msa0677530 MtrunA17_Chr7g0249421 49.666 449 188 8 51 469 50 490 2.71e-143 419
Msa0677530 MtrunA17_Chr7g0221691 54.790 334 143 4 54 380 86 418 3.59e-130 384
Msa0677530 MtrunA17_Chr7g0243571 43.552 411 197 8 62 468 57 436 1.66e-115 347
Msa0677530 MtrunA17_Chr8g0342431 45.050 404 156 10 1 370 1 372 9.48e-107 323
Msa0677530 MtrunA17_Chr7g0272061 45.679 324 169 3 58 379 52 370 1.11e-102 311
Msa0677530 MtrunA17_Chr4g0004971 46.855 318 157 4 56 371 37 344 2.48e-102 310
Msa0677530 MtrunA17_Chr1g0192421 44.272 323 166 3 49 370 41 350 3.20e-100 304
Msa0677530 MtrunA17_Chr4g0067711 46.382 304 147 4 69 370 63 352 1.08e-99 303
Msa0677530 MtrunA17_Chr2g0295401 46.885 305 148 4 67 370 62 353 4.65e-99 301
Msa0677530 MtrunA17_Chr1g0151781 46.965 313 152 3 61 373 33 331 5.87e-90 277
Msa0677530 MtrunA17_Chr6g0486661 29.524 315 164 9 79 372 106 383 1.37e-26 114
Msa0677530 MtrunA17_Chr4g0066371 26.646 319 177 8 79 378 68 348 5.76e-26 109
Msa0677530 MtrunA17_Chr5g0396731 33.582 268 122 9 74 332 80 300 6.59e-24 102
Msa0677530 MtrunA17_Chr2g0286951 27.219 338 188 10 79 396 69 368 2.18e-23 102
Msa0677530 MtrunA17_Chr3g0136711 29.577 284 137 9 98 378 67 290 2.86e-19 88.2
Msa0677530 MtrunA17_Chr1g0212961 30.435 253 118 9 96 347 126 321 3.22e-19 89.0
Msa0677530 MtrunA17_Chr6g0483411 30.045 223 117 7 165 369 117 318 6.57e-19 87.4
Msa0677530 MtrunA17_Chr1g0150451 30.677 251 120 7 98 347 110 307 7.06e-19 87.8
Msa0677530 MtrunA17_Chr8g0389921 28.958 259 153 7 74 329 156 386 2.33e-18 87.4
Msa0677530 MtrunA17_Chr3g0135961 29.688 256 137 10 77 329 269 484 3.93e-18 87.0
Msa0677530 MtrunA17_Chr4g0070871 27.888 251 135 8 84 329 236 445 8.43e-18 85.9
Msa0677530 MtrunA17_Chr3g0112291 34.595 185 92 6 159 330 153 321 1.56e-17 84.3
Msa0677530 MtrunA17_Chr5g0435721 29.151 271 127 9 74 330 200 419 2.27e-16 81.3
Msa0677530 MtrunA17_Chr1g0150781 27.869 244 135 6 89 329 283 488 1.89e-15 79.0
Msa0677530 MtrunA17_Chr2g0317021 35.556 180 90 8 193 370 177 332 2.04e-15 77.4
Msa0677530 MtrunA17_Chr8g0360351 35.028 177 97 8 172 347 106 265 2.09e-15 76.6
Msa0677530 MtrunA17_Chr1g0175381 26.349 315 173 13 93 378 76 360 2.55e-15 77.4
Msa0677530 MtrunA17_Chr3g0089711 27.245 323 155 14 91 371 63 347 5.65e-15 76.3
Msa0677530 MtrunA17_Chr3g0089721 27.245 323 155 14 91 371 63 347 7.03e-15 76.3
Msa0677530 MtrunA17_Chr2g0299981 24.345 267 141 8 82 325 248 476 2.90e-14 75.1
Msa0677530 MtrunA17_Chr1g0194191 28.030 264 134 11 96 349 118 335 5.29e-14 73.6
Msa0677530 MtrunA17_Chr4g0050381 30.645 186 108 8 166 347 92 260 5.63e-14 72.4
Msa0677530 MtrunA17_Chr3g0136811 28.826 281 158 10 71 330 28 287 1.20e-13 72.4
Msa0677530 MtrunA17_Chr1g0158781 28.870 239 113 7 96 330 145 330 1.90e-13 71.6
Msa0677530 MtrunA17_Chr5g0407161 25.833 240 118 7 96 330 124 308 4.15e-13 70.9
Msa0677530 MtrunA17_Chr3g0126511 31.481 162 93 4 169 329 162 306 4.44e-13 70.5
Msa0677530 MtrunA17_Chr8g0371321 26.087 253 138 10 168 378 116 361 5.41e-13 70.5
Msa0677530 MtrunA17_Chr5g0430481 25.439 342 195 11 35 370 87 374 8.57e-13 69.7
Msa0677530 MtrunA17_Chr7g0256751 27.660 282 145 11 91 349 64 309 1.09e-12 69.7
Msa0677530 MtrunA17_Chr7g0250061 28.879 232 117 12 197 391 149 369 1.96e-12 68.6
Msa0677530 MtrunA17_Chr1g0150071 27.402 281 162 9 71 330 28 287 5.19e-12 67.0
Msa0677530 MtrunA17_Chr3g0089691 26.966 267 124 10 185 392 45 299 5.29e-12 66.6
Msa0677530 MtrunA17_Chr3g0144111 27.711 166 96 4 169 329 43 189 1.15e-11 65.1
Msa0677530 MtrunA17_Chr1g0171571 31.548 168 96 5 168 330 457 610 1.34e-11 67.0
Msa0677530 MtrunA17_Chr1g0207571 24.107 336 192 13 89 390 54 360 4.40e-11 64.3
Msa0677530 MtrunA17_Chr2g0295991 26.667 270 153 9 95 332 165 421 4.67e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0677530 AT4G03415.1 76.261 476 99 6 1 470 1 468 0.0 676
Msa0677530 AT4G03415.3 76.261 476 99 6 1 470 1 468 0.0 676
Msa0677530 AT4G03415.2 76.261 476 99 6 1 470 1 468 0.0 676
Msa0677530 AT1G03590.1 68.499 473 127 6 1 466 1 458 0.0 620
Msa0677530 AT1G16220.1 48.026 456 213 7 35 470 35 486 1.17e-145 426
Msa0677530 AT3G02750.2 47.400 500 214 11 1 463 1 488 3.33e-140 412
Msa0677530 AT3G02750.1 47.400 500 214 11 1 463 1 488 3.33e-140 412
Msa0677530 AT1G79630.1 48.098 447 194 8 57 470 58 499 3.89e-138 407
Msa0677530 AT1G79630.8 48.098 447 194 8 57 470 54 495 7.23e-138 406
Msa0677530 AT5G36250.1 48.252 429 169 7 51 463 52 443 3.29e-134 395
Msa0677530 AT3G02750.3 46.888 482 180 9 51 463 49 523 2.52e-132 393
Msa0677530 AT5G36250.2 46.953 443 168 8 51 463 52 457 2.47e-130 385
Msa0677530 AT1G79630.2 47.482 417 181 8 87 470 18 429 2.21e-123 367
Msa0677530 AT1G79630.7 47.482 417 181 8 87 470 18 429 2.21e-123 367
Msa0677530 AT1G79630.6 52.427 309 137 3 167 470 86 389 8.14e-110 330
Msa0677530 AT1G79630.3 52.427 309 137 3 167 470 86 389 8.14e-110 330
Msa0677530 AT1G79630.4 52.427 309 137 3 167 470 86 389 8.14e-110 330
Msa0677530 AT1G79630.5 52.427 309 137 3 167 470 86 389 8.14e-110 330
Msa0677530 AT5G01700.2 48.094 341 161 4 58 397 39 364 7.22e-104 315
Msa0677530 AT5G01700.1 49.235 327 150 4 72 397 4 315 4.83e-103 311
Msa0677530 AT5G27930.1 43.658 339 178 3 32 369 27 353 3.72e-101 308
Msa0677530 AT5G27930.2 43.658 339 178 3 32 369 27 353 3.72e-101 308
Msa0677530 AT3G05640.2 45.541 314 152 3 58 370 54 349 3.87e-101 307
Msa0677530 AT3G05640.1 45.541 314 152 3 58 370 54 349 3.87e-101 307
Msa0677530 AT3G05640.3 45.541 314 152 3 58 370 54 349 3.87e-101 307
Msa0677530 AT5G36250.3 52.297 283 122 4 51 320 52 334 4.86e-101 306
Msa0677530 AT3G16800.2 42.208 308 156 4 65 370 61 348 5.11e-84 263
Msa0677530 AT3G16800.1 42.208 308 156 4 65 370 61 348 5.11e-84 263
Msa0677530 AT3G16800.3 42.208 308 156 4 65 370 61 348 5.11e-84 263
Msa0677530 AT5G27930.3 44.788 259 130 3 60 317 55 301 3.12e-80 252
Msa0677530 AT5G26010.1 44.702 302 142 5 73 373 50 327 1.12e-79 251
Msa0677530 AT4G32950.1 39.118 363 171 7 17 377 9 323 5.51e-78 246
Msa0677530 AT3G16800.4 41.026 273 140 3 99 370 1 253 1.32e-71 228
Msa0677530 AT3G16800.6 41.026 273 140 3 99 370 1 253 1.32e-71 228
Msa0677530 AT4G32950.2 38.284 303 137 7 17 317 9 263 5.39e-58 193
Msa0677530 AT3G16800.5 35.754 179 93 4 65 241 61 219 1.00e-32 124
Msa0677530 AT2G20050.1 29.430 316 166 9 79 375 125 402 4.77e-29 121
Msa0677530 AT2G20050.2 29.430 316 166 9 79 375 125 402 5.03e-29 121
Msa0677530 AT3G06270.1 28.041 296 151 9 79 353 70 324 1.27e-22 99.4
Msa0677530 AT3G11410.1 33.333 276 108 11 74 324 112 336 1.74e-22 99.8
Msa0677530 AT5G10740.1 35.417 192 102 5 161 349 93 265 1.87e-20 92.8
Msa0677530 AT5G10740.2 35.417 192 102 5 161 349 93 265 1.87e-20 92.8
Msa0677530 AT5G59220.1 31.541 279 114 11 74 330 119 342 2.72e-20 93.2
Msa0677530 AT5G24940.1 34.737 190 106 5 161 349 93 265 3.77e-20 93.2
Msa0677530 AT1G07430.1 28.772 285 133 9 74 338 128 362 4.51e-20 92.8
Msa0677530 AT4G28400.3 37.778 180 94 9 169 347 82 244 1.61e-19 88.6
Msa0677530 AT2G34740.1 36.667 210 104 10 166 370 150 335 2.66e-19 89.4
Msa0677530 AT4G28400.1 37.778 180 94 9 169 347 104 266 3.13e-19 88.2
Msa0677530 AT1G72770.4 33.603 247 113 11 96 329 238 446 9.73e-19 89.4
Msa0677530 AT1G72770.1 33.603 247 113 11 96 329 238 446 9.73e-19 89.4
Msa0677530 AT1G72770.3 33.603 247 113 11 96 329 238 446 9.73e-19 89.4
Msa0677530 AT4G31750.2 33.010 206 111 7 169 371 101 282 1.54e-18 86.7
Msa0677530 AT4G31750.1 32.547 212 120 6 161 371 93 282 1.57e-18 86.7
Msa0677530 AT4G31750.3 32.547 212 120 6 161 371 93 282 1.57e-18 86.7
Msa0677530 AT1G78200.5 34.239 184 106 5 167 349 54 223 9.21e-18 82.8
Msa0677530 AT1G78200.4 34.239 184 106 5 167 349 54 223 9.21e-18 82.8
Msa0677530 AT1G78200.1 34.239 184 106 5 167 349 99 268 1.07e-17 83.6
Msa0677530 AT1G78200.3 34.239 184 106 5 167 349 99 268 1.07e-17 83.6
Msa0677530 AT1G78200.2 34.239 184 106 5 167 349 99 268 1.07e-17 83.6
Msa0677530 AT1G43900.1 30.400 250 119 7 96 344 154 349 2.90e-16 80.9
Msa0677530 AT5G57050.1 29.487 234 123 7 96 329 160 351 4.22e-16 80.5
Msa0677530 AT5G57050.2 29.487 234 123 7 96 329 120 311 5.91e-16 79.7
Msa0677530 AT2G20630.1 36.066 183 99 9 167 348 98 263 6.23e-16 78.6
Msa0677530 AT4G26080.1 30.769 234 118 9 96 329 172 361 8.02e-16 79.7
Msa0677530 AT2G20630.2 38.217 157 80 7 193 348 123 263 1.02e-15 78.2
Msa0677530 AT1G34750.2 31.606 193 112 8 159 349 93 267 1.23e-15 77.8
Msa0677530 AT1G34750.1 31.606 193 112 8 159 349 93 267 1.23e-15 77.8
Msa0677530 AT1G34750.3 31.606 193 112 8 159 349 93 267 1.23e-15 77.8
Msa0677530 AT5G53140.1 28.287 251 126 7 98 347 134 331 2.13e-15 78.6
Msa0677530 AT5G53140.2 28.287 251 126 7 98 347 134 331 2.13e-15 78.6
Msa0677530 AT1G17550.1 30.204 245 117 10 96 325 237 442 7.95e-15 77.0
Msa0677530 AT1G17550.2 30.204 245 117 10 96 325 237 442 7.95e-15 77.0
Msa0677530 AT5G51760.2 31.553 206 113 6 157 350 153 342 4.12e-14 74.3
Msa0677530 AT5G51760.1 31.553 206 113 6 157 350 183 372 4.51e-14 74.3
Msa0677530 AT5G06750.3 25.559 313 172 12 94 374 80 363 5.27e-14 73.9
Msa0677530 AT5G06750.1 25.559 313 172 12 94 374 80 363 5.27e-14 73.9
Msa0677530 AT3G15260.2 33.333 186 103 8 166 347 104 272 2.12e-13 71.2
Msa0677530 AT3G15260.1 33.333 186 103 8 166 347 104 272 2.12e-13 71.2
Msa0677530 AT4G28400.2 37.908 153 77 9 169 320 104 239 2.52e-13 70.1
Msa0677530 AT1G22280.3 31.863 204 115 8 167 369 106 286 3.23e-13 70.5
Msa0677530 AT1G22280.1 31.863 204 115 8 167 369 100 280 3.50e-13 70.5
Msa0677530 AT1G18030.1 25.792 221 125 6 167 369 149 348 9.89e-13 69.7
Msa0677530 AT3G62260.3 28.409 264 130 9 96 347 27 243 5.60e-12 67.0
Msa0677530 AT3G62260.2 28.309 272 132 10 90 347 111 333 6.98e-12 67.4
Msa0677530 AT3G62260.1 28.309 272 132 10 90 347 110 332 7.46e-12 67.4
Msa0677530 AT5G06750.2 25.984 254 154 9 153 374 30 281 7.98e-12 66.6
Msa0677530 AT1G34750.4 31.792 173 96 9 159 329 93 245 1.31e-11 65.1
Msa0677530 AT1G07160.1 28.502 207 130 5 164 370 188 376 1.47e-11 66.2
Msa0677530 AT1G48040.1 27.344 256 128 10 96 341 116 323 2.17e-11 65.9
Msa0677530 AT3G17250.1 24.911 281 158 10 96 368 158 393 2.32e-11 65.9
Msa0677530 AT3G51470.1 25.735 272 134 10 70 330 76 290 3.14e-11 65.1
Msa0677530 AT2G40860.2 28.899 218 128 7 141 350 438 636 3.15e-11 66.2
Msa0677530 AT2G40860.4 27.419 248 145 8 141 380 340 560 3.50e-11 65.9
Msa0677530 AT2G40860.1 27.419 248 145 8 141 380 438 658 4.26e-11 65.9
Msa0677530 AT3G51470.2 25.556 270 137 9 70 330 32 246 4.57e-11 64.3

Find 138 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTCTTCATGGGATATAT+TGG 0.215176 4_4:+31580707 Msa0677530:CDS
CATGGAGTCATTGCTGTCTT+TGG 0.215963 4_4:-31580753 None:intergenic
GTTGTAAAGTAACTTATATT+TGG 0.272280 4_4:+31579712 Msa0677530:five_prime_UTR
ACCATCCAGAGCAACCATTC+TGG 0.309209 4_4:+31582771 Msa0677530:CDS
CCTCATGAAGCAAGAAATTC+AGG 0.309276 4_4:-31583015 None:intergenic
ATCTCTTCATGGGATATATT+GGG 0.314474 4_4:+31580708 Msa0677530:CDS
AAACTCGAAGTGGTTTGATT+TGG 0.316314 4_4:+31583214 Msa0677530:three_prime_UTR
TCCAGAATACACACATTATA+TGG 0.326389 4_4:-31579851 None:intergenic
AACTCGAAGTGGTTTGATTT+GGG 0.333922 4_4:+31583215 Msa0677530:three_prime_UTR
CTACAGAAGCAGTCTAGATT+TGG 0.342021 4_4:-31580564 None:intergenic
CAGTAAAATTGCTTTCGTTT+TGG 0.345314 4_4:+31580367 Msa0677530:CDS
CCAGGGTTCAAATCTCTTCA+TGG 0.346038 4_4:+31580697 Msa0677530:intron
ATCATCTGCAGCAAGGATTC+TGG 0.347597 4_4:+31582614 Msa0677530:CDS
AGAATCAGATTATGATGAAC+AGG 0.348246 4_4:+31582734 Msa0677530:CDS
AATGACCCACTTGGCAAATC+AGG 0.352742 4_4:-31580806 None:intergenic
ACCATATAATGTGTGTATTC+TGG 0.372095 4_4:+31579850 Msa0677530:five_prime_UTR
TGCTAGGTAAGGATGATAAT+TGG 0.373974 4_4:-31580033 None:intergenic
TTAGCAATGGCTAGGGCGTT+TGG 0.378040 4_4:+31581008 Msa0677530:CDS
TGTCCATCATCTGATTCAAC+TGG 0.378270 4_4:-31582798 None:intergenic
TTCATTGTTCTTGCGTCAGA+TGG 0.392602 4_4:+31581107 Msa0677530:CDS
GATTTCTGCTTGAAGGAGTA+TGG 0.392742 4_4:+31581032 Msa0677530:CDS
AGATCAAAACTGGTTAGGTT+TGG 0.408331 4_4:+31582929 Msa0677530:CDS
GATCTTTCTTCAGAAAATCT+AGG 0.410352 4_4:-31582987 None:intergenic
CTTCAGAAAATCTAGGAAGT+TGG 0.412133 4_4:-31582980 None:intergenic
GTTTGGAGATTTCTGCTTGA+AGG 0.422853 4_4:+31581025 Msa0677530:CDS
CTCTTGAATCGAAACAAAAT+AGG 0.424477 4_4:+31580394 Msa0677530:CDS
AGCAGCCGGTGAGAAAATTC+AGG 0.426271 4_4:-31581068 None:intergenic
TTTCACTAATGGAAAGAGTC+GGG 0.431687 4_4:+31580060 Msa0677530:CDS
TTCTCAGACTCTCCACAGTC+TGG 0.435821 4_4:-31580450 None:intergenic
CCATCCAGAGCAACCATTCT+GGG 0.439997 4_4:+31582772 Msa0677530:CDS
GGTGAAGATCAAAACTGGTT+AGG 0.440345 4_4:+31582924 Msa0677530:CDS
TGGGGATTCTCGAGCAATCA+TGG 0.443019 4_4:+31580727 Msa0677530:CDS
ATTCAACTGGATTCCCAGAA+TGG 0.448330 4_4:-31582785 None:intergenic
GGGTCGCAAGGGAATTAATC+AGG 0.449317 4_4:+31580105 Msa0677530:CDS
ATCTAGACTGCTTCTGTAGC+GGG 0.453237 4_4:+31580568 Msa0677530:CDS
TGTGGTGTCTTTGATGGTCA+TGG 0.456999 4_4:+31580300 Msa0677530:CDS
GATTCCCAGAATGGTTGCTC+TGG 0.461681 4_4:-31582776 None:intergenic
TGCTTCGAAATTTGTTTCTG+TGG 0.464700 4_4:+31579962 Msa0677530:CDS
TTCGTGCATATTTACACAGC+AGG 0.465091 4_4:+31580084 Msa0677530:CDS
ACCACAAAATATCGTATCTT+CGG 0.468013 4_4:-31580283 None:intergenic
CATCAGGTGAAGATCAAAAC+TGG 0.468748 4_4:+31582919 Msa0677530:CDS
TCTTGAATCGAGTGTTTACC+AGG 0.472160 4_4:-31583056 None:intergenic
CGTGAGATCTGTACTGGAAA+GGG 0.472923 4_4:+31579809 Msa0677530:five_prime_UTR
CCCAGAATGGTTGCTCTGGA+TGG 0.475678 4_4:-31582772 None:intergenic
CAAGTGCTAAAATATAGATT+AGG 0.477722 4_4:+31583349 Msa0677530:three_prime_UTR
GTTGAAGATGAAGCAGCATC+AGG 0.478334 4_4:+31582903 Msa0677530:CDS
GTAAAGTTCCTTCTCAAAGA+TGG 0.483162 4_4:-31582831 None:intergenic
TCTGGTAAATTCAGCTGCTC+GGG 0.485878 4_4:+31582632 Msa0677530:CDS
AGCCACACCCTAGGAACTTC+AGG 0.487256 4_4:-31580963 None:intergenic
TTCTGGTAAATTCAGCTGCT+CGG 0.491412 4_4:+31582631 Msa0677530:CDS
GAAGCAAGAAATTCAGGAGT+TGG 0.493475 4_4:-31583009 None:intergenic
TAAATTCAGCTGCTCGGGAA+TGG 0.495611 4_4:+31582637 Msa0677530:CDS
AACCCTGGTGCGTCATCAAA+AGG 0.497791 4_4:-31580987 None:intergenic
AAGATGAGCCTGAAGTTCCT+AGG 0.498159 4_4:+31580955 Msa0677530:CDS
AATTATCATCCTTACCTAGC+AGG 0.505801 4_4:+31580035 Msa0677530:CDS
ATCTGTGACTGTAGTAAAGC+AGG 0.511946 4_4:+31580596 Msa0677530:CDS
CAAAACTGGTTAGGTTTGGA+AGG 0.513854 4_4:+31582933 Msa0677530:CDS
CAGGGTTCAAATCTCTTCAT+GGG 0.514984 4_4:+31580698 Msa0677530:intron
ATCGACAGACACTGCTCCGT+TGG 0.516366 4_4:-31582880 None:intergenic
CACCAGGGTTAGCAATGGCT+AGG 0.517626 4_4:+31581000 Msa0677530:CDS
AAACCACTTCGAGTTTGTCT+AGG 0.521629 4_4:-31583207 None:intergenic
AAACAAATTTCGAAGCAAGA+TGG 0.526661 4_4:-31579956 None:intergenic
GTCGAAGTACTTGTAGCAGC+GGG 0.528583 4_4:+31579912 Msa0677530:CDS
ATTGAACATGTTAGATCCGC+GGG 0.531833 4_4:-31583259 None:intergenic
ATACTATGAGAAATGCTAAC+GGG 0.532043 4_4:+31583395 Msa0677530:three_prime_UTR
AGCCTGAAGTTCCTAGGGTG+TGG 0.534994 4_4:+31580961 Msa0677530:CDS
ATTTACACAGCAGGGTCGCA+AGG 0.535677 4_4:+31580093 Msa0677530:CDS
TCATTGTTCTTGCGTCAGAT+GGG 0.536426 4_4:+31581108 Msa0677530:CDS
AGTGAAAATCCTGCTAGGTA+AGG 0.538054 4_4:-31580044 None:intergenic
TTATTGCTCTAGTCTTGTAA+AGG 0.543569 4_4:+31578862 Msa0677530:five_prime_UTR
CAGACAAAACTTGCTTCAAA+CGG 0.544074 4_4:+31580418 Msa0677530:CDS
AAATACTTCTTCAAAATCCG+TGG 0.545645 4_4:-31579677 None:intergenic
TGCGAACGTGAGATCTGTAC+TGG 0.547512 4_4:+31579803 Msa0677530:five_prime_UTR
AGGATAAACTGAACTCCACT+TGG 0.551291 4_4:+31580487 Msa0677530:CDS
CCTGAATTTCTTGCTTCATG+AGG 0.551437 4_4:+31583015 Msa0677530:exon
ACTTGTAGCAGCGGGAGCAA+TGG 0.557749 4_4:+31579920 Msa0677530:CDS
GATCTCTGTCTGTGAGCAGC+CGG 0.558467 4_4:-31581082 None:intergenic
CAAAGACAGCAATGACTCCA+TGG 0.558918 4_4:+31580754 Msa0677530:CDS
AATCAAGCAGTGCAAGGGTA+GGG 0.560069 4_4:+31580920 Msa0677530:CDS
AATGAAGTAATGCTTGCTGC+AGG 0.560412 4_4:-31578832 None:intergenic
ATCTTGTTGCGCGTAAAGTG+AGG 0.564465 4_4:+31580334 Msa0677530:CDS
GGGAATTAATCAGGATGCCA+TGG 0.565143 4_4:+31580114 Msa0677530:CDS
ACGTGAGATCTGTACTGGAA+AGG 0.565989 4_4:+31579808 Msa0677530:five_prime_UTR
AGACCATGGACAAAGAGCTT+AGG 0.566360 4_4:+31580535 Msa0677530:CDS
TAACTGTTTATTGCAGTACC+TGG 0.566515 4_4:+31583038 Msa0677530:three_prime_UTR
AATCCAGTTGAATCAGATGA+TGG 0.567117 4_4:+31582795 Msa0677530:CDS
ATCAGATGATGGACAAAAGT+CGG 0.568179 4_4:+31582806 Msa0677530:CDS
TCTCTTCATGGGATATATTG+GGG 0.568937 4_4:+31580709 Msa0677530:CDS
ACCAGGGTTAGCAATGGCTA+GGG 0.571256 4_4:+31581001 Msa0677530:CDS
GGAAAGAATCAAGCAGTGCA+AGG 0.573684 4_4:+31580914 Msa0677530:CDS
TAACCTAGACAAACTCGAAG+TGG 0.574115 4_4:+31583204 Msa0677530:intron
AAAACTGGTTAGGTTTGGAA+GGG 0.578580 4_4:+31582934 Msa0677530:CDS
AGATGAGCCTGAAGTTCCTA+GGG 0.581249 4_4:+31580956 Msa0677530:CDS
AGACCTAAGCTCTTTGTCCA+TGG 0.584175 4_4:-31580538 None:intergenic
AGTCGAAGTACTTGTAGCAG+CGG 0.586885 4_4:+31579911 Msa0677530:CDS
GGGGATTCTCGAGCAATCAT+GGG 0.587725 4_4:+31580728 Msa0677530:CDS
CCATTAGTGAAAATCCTGCT+AGG 0.589167 4_4:-31580049 None:intergenic
ATCAGGATGCCATGGTTGTG+TGG 0.596198 4_4:+31580122 Msa0677530:CDS
CATTGTTCTTGCGTCAGATG+GGG 0.596634 4_4:+31581109 Msa0677530:CDS
TATGAAAGCTTCTCTCCAAG+TGG 0.596713 4_4:-31580502 None:intergenic
GAATCAAGCAGTGCAAGGGT+AGG 0.597342 4_4:+31580919 Msa0677530:CDS
GAAAGAATCAAGCAGTGCAA+GGG 0.598000 4_4:+31580915 Msa0677530:CDS
GGTGGTTGAGATAGTATCAT+CGG 0.598952 4_4:+31582581 Msa0677530:CDS
TCCGTTCAAATAGCGTCCCA+CGG 0.601606 4_4:+31579660 Msa0677530:five_prime_UTR
AATCTAGACTGCTTCTGTAG+CGG 0.606598 4_4:+31580567 Msa0677530:CDS
TCAAAAGGCAGCCACACCCT+AGG 0.606675 4_4:-31580972 None:intergenic
ACTAGTGAATTAGGCTACCA+AGG 0.606910 4_4:-31583117 None:intergenic
GCCCTAGCCATTGCTAACCC+TGG 0.606931 4_4:-31581002 None:intergenic
AAACTGGTTAGGTTTGGAAG+GGG 0.609381 4_4:+31582935 Msa0677530:CDS
AGTCGGAGCCATCTTTGAGA+AGG 0.610231 4_4:+31582823 Msa0677530:CDS
TTCACTAATGGAAAGAGTCG+GGG 0.619236 4_4:+31580061 Msa0677530:CDS
TGAGAAGGATTGTTCTGCTG+AGG 0.622279 4_4:+31580467 Msa0677530:CDS
TCTGTGGACAAAAGAGAGCA+AGG 0.624356 4_4:+31579978 Msa0677530:CDS
TTTACACAGCAGGGTCGCAA+GGG 0.624371 4_4:+31580094 Msa0677530:CDS
AGACTGTGGAGAGTCTGAGA+AGG 0.625268 4_4:+31580452 Msa0677530:CDS
TCTTGTTGCGCGTAAAGTGA+GGG 0.625856 4_4:+31580335 Msa0677530:CDS
AATTGAACATGTTAGATCCG+CGG 0.626787 4_4:-31583260 None:intergenic
AGTCAACTGAATTGCCACCA+TGG 0.629372 4_4:-31580771 None:intergenic
TCCGTGGGACGCTATTTGAA+CGG 0.632474 4_4:-31579661 None:intergenic
TATACTATGAGAAATGCTAA+CGG 0.633593 4_4:+31583394 Msa0677530:three_prime_UTR
TCGTGCATATTTACACAGCA+GGG 0.634119 4_4:+31580085 Msa0677530:CDS
TCAGGATGCCATGGTTGTGT+GGG 0.634495 4_4:+31580123 Msa0677530:CDS
AATACTTCTTCAAAATCCGT+GGG 0.635830 4_4:-31579676 None:intergenic
TTTGATGGTCATGGTCCACA+AGG 0.637535 4_4:+31580309 Msa0677530:CDS
TTGGTTGGGAATAGGAGAAG+CGG 0.643491 4_4:+31580893 Msa0677530:intron
ACTTACTTCCCACACAACCA+TGG 0.645722 4_4:-31580131 None:intergenic
CATAAAAGCATACAAGACCA+TGG 0.649143 4_4:+31580521 Msa0677530:CDS
TCAGAAGAAAACGAGACCAA+CGG 0.665927 4_4:+31582864 Msa0677530:CDS
GAATCAGATTATGATGAACA+GGG 0.666739 4_4:+31582735 Msa0677530:CDS
AGTTTACAGTTTCAAACCCG+CGG 0.666997 4_4:+31583243 Msa0677530:three_prime_UTR
AGAATACACACATTATATGG+TGG 0.669023 4_4:-31579848 None:intergenic
TGACGCACCAGGGTTAGCAA+TGG 0.672958 4_4:+31580995 Msa0677530:CDS
CAACACGATCATCTGCAGCA+AGG 0.675811 4_4:+31582607 Msa0677530:CDS
CTTGCTGCAGATGATCGTGT+TGG 0.679443 4_4:-31582606 None:intergenic
CGGAACATAACACCAGACTG+TGG 0.679727 4_4:+31580438 Msa0677530:CDS
ATGAAGTAATGCTTGCTGCA+GGG 0.684169 4_4:-31578831 None:intergenic
CGCGCAACAAGATGACCTTG+TGG 0.685405 4_4:-31580324 None:intergenic
AGACAGCAATGACTCCATGG+TGG 0.756556 4_4:+31580757 Msa0677530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTATTTTTTATTTTTC+TGG + chr4_4:31581184-31581203 Msa0677530:intron 10.0%
!! CAAATTATTTAAAAAATAGA+TGG - chr4_4:31581771-31581790 None:intergenic 10.0%
!!! CAAAAATTAAAACAACTTTT+TGG - chr4_4:31578910-31578929 None:intergenic 15.0%
!! ATAAATAAATATCAAAGCAA+AGG - chr4_4:31579274-31579293 None:intergenic 15.0%
!! TTATTTATTTGAGCTATTTA+AGG + chr4_4:31579286-31579305 Msa0677530:intron 15.0%
!! ATTAATATCATGTTTCAAAT+GGG - chr4_4:31579356-31579375 None:intergenic 15.0%
!! TATTAATATCATGTTTCAAA+TGG - chr4_4:31579357-31579376 None:intergenic 15.0%
!!! ATTTGAAACATGATATTAAT+AGG + chr4_4:31579356-31579375 Msa0677530:intron 15.0%
!! GATTGTATATTAACTATTAT+TGG + chr4_4:31579601-31579620 Msa0677530:intron 15.0%
!!! TCTTTTTTTAAGTTATTTGA+GGG + chr4_4:31580196-31580215 Msa0677530:intron 15.0%
!! CAAAAATACAGATAATAATT+AGG - chr4_4:31580250-31580269 None:intergenic 15.0%
!!! ATTATTATCTGTATTTTTGT+AGG + chr4_4:31580251-31580270 Msa0677530:intron 15.0%
!! AGAAATTAAGAAAAACATAA+AGG - chr4_4:31580670-31580689 None:intergenic 15.0%
!! AATTTATTATACATCTTGAT+CGG - chr4_4:31582413-31582432 None:intergenic 15.0%
!!! TCAATTTGTTTTAGTTTTTT+TGG + chr4_4:31583277-31583296 Msa0677530:three_prime_UTR 15.0%
!!! TTTGGTTTTTTGTTTTTACA+AGG + chr4_4:31578977-31578996 Msa0677530:intron 20.0%
!!! AGGATCTATTTTTATTGAAA+AGG + chr4_4:31579306-31579325 Msa0677530:intron 20.0%
!! TAAAAACTAAACCAAAACAA+AGG - chr4_4:31579416-31579435 None:intergenic 20.0%
!!! TTTATTTTACATTTGGCAAA+TGG + chr4_4:31579566-31579585 Msa0677530:intron 20.0%
!! GTTGTAAAGTAACTTATATT+TGG + chr4_4:31579712-31579731 Msa0677530:five_prime_UTR 20.0%
!! ATAACTTAAAAAAAGAGTCA+TGG - chr4_4:31580192-31580211 None:intergenic 20.0%
!!! CTCTTTTTTTAAGTTATTTG+AGG + chr4_4:31580195-31580214 Msa0677530:intron 20.0%
!! CATCAGAGAATAAATAATAT+TGG - chr4_4:31580835-31580854 None:intergenic 20.0%
!! TTTCTAACTTAATTCCAATT+TGG + chr4_4:31580874-31580893 Msa0677530:intron 20.0%
!!! ATGGTAAGATTATTTTTTCA+TGG - chr4_4:31581242-31581261 None:intergenic 20.0%
!! ATGTTAATAGTAATGAATTG+TGG + chr4_4:31581308-31581327 Msa0677530:intron 20.0%
!! GATTAAATAGTACAAAACAT+TGG + chr4_4:31581855-31581874 Msa0677530:intron 20.0%
!! CAAAACATTGGAAAAAAATT+TGG + chr4_4:31581867-31581886 Msa0677530:intron 20.0%
!! AAATCATATAAATTCCACTT+AGG - chr4_4:31582117-31582136 None:intergenic 20.0%
!!! AATTTGTAAATAACTTGTGT+AGG + chr4_4:31582429-31582448 Msa0677530:intron 20.0%
!!! AAGATTTTTTTTTGTTGAAG+TGG + chr4_4:31583079-31583098 Msa0677530:three_prime_UTR 20.0%
!! TAGAAAACTAATGTTCAATT+AGG + chr4_4:31583139-31583158 Msa0677530:intron 20.0%
!! AGAAAACTAATGTTCAATTA+GGG + chr4_4:31583140-31583159 Msa0677530:intron 20.0%
!!! TTTAGTTTTTTTGGTTATGT+TGG + chr4_4:31583286-31583305 Msa0677530:three_prime_UTR 20.0%
! GTAAGCAATGAAAATTTCAA+TGG + chr4_4:31578884-31578903 Msa0677530:intron 25.0%
!!! TCCTTTTTCTTCTTGTTTTT+TGG + chr4_4:31578959-31578978 Msa0677530:intron 25.0%
! ACCAAAAAACAAGAAGAAAA+AGG - chr4_4:31578963-31578982 None:intergenic 25.0%
! AACATGATATTAATAGGACA+TGG + chr4_4:31579362-31579381 Msa0677530:intron 25.0%
! TATATTCTTTCTTCACATGT+TGG + chr4_4:31579512-31579531 Msa0677530:intron 25.0%
! ATATTCTTTCTTCACATGTT+GGG + chr4_4:31579513-31579532 Msa0677530:intron 25.0%
!! TTGGACTTAAAGAGAATTTT+TGG + chr4_4:31579731-31579750 Msa0677530:five_prime_UTR 25.0%
!! TCTGGAACTGAAAAAAAAAA+TGG + chr4_4:31579868-31579887 Msa0677530:exon 25.0%
! CTGGAACTGAAAAAAAAAAT+GGG + chr4_4:31579869-31579888 Msa0677530:exon 25.0%
! TATGTTCATGTTCACTTTAT+TGG + chr4_4:31580153-31580172 Msa0677530:intron 25.0%
! TCTTAATTTCTTAACTTACC+AGG + chr4_4:31580679-31580698 Msa0677530:intron 25.0%
! CTTAATTTCTTAACTTACCA+GGG + chr4_4:31580680-31580699 Msa0677530:intron 25.0%
! ATTGGAATTAAGTTAGAAAC+AGG - chr4_4:31580873-31580892 None:intergenic 25.0%
! TAACTTAATTCCAATTTGGT+TGG + chr4_4:31580878-31580897 Msa0677530:intron 25.0%
! AACTTAATTCCAATTTGGTT+GGG + chr4_4:31580879-31580898 Msa0677530:intron 25.0%
!!! TTTATTTTTCTGGTGTGAAT+CGG + chr4_4:31581194-31581213 Msa0677530:intron 25.0%
!!! GAAACAAGTTGATTTTCATA+GGG - chr4_4:31581560-31581579 None:intergenic 25.0%
!!! AGAAACAAGTTGATTTTCAT+AGG - chr4_4:31581561-31581580 None:intergenic 25.0%
!! TATGAAAATCAACTTGTTTC+TGG + chr4_4:31581560-31581579 Msa0677530:intron 25.0%
! AAATAACAACCAATCATAGA+AGG + chr4_4:31581660-31581679 Msa0677530:intron 25.0%
! AATAACAACCAATCATAGAA+GGG + chr4_4:31581661-31581680 Msa0677530:intron 25.0%
!!! TGTTTTAAGCATTAGCAAAT+AGG + chr4_4:31581738-31581757 Msa0677530:intron 25.0%
!! TGTTTTGTACTATTTAATCC+AGG - chr4_4:31581854-31581873 None:intergenic 25.0%
!!! TAATGCTTTTGGTTCTAATA+TGG + chr4_4:31581897-31581916 Msa0677530:intron 25.0%
! GTTATCAAGTAATTTAGACT+CGG + chr4_4:31581971-31581990 Msa0677530:intron 25.0%
! TCCATATTTCATATATTTGC+AGG - chr4_4:31582012-31582031 None:intergenic 25.0%
! CTAGTACTAAACAATGATAA+GGG - chr4_4:31582469-31582488 None:intergenic 25.0%
! ACTAGTACTAAACAATGATA+AGG - chr4_4:31582470-31582489 None:intergenic 25.0%
!! GATTTTCTTGGTATTTTTCT+AGG + chr4_4:31582533-31582552 Msa0677530:intron 25.0%
!!! CTTATTTTTGGATGGTAAAA+TGG + chr4_4:31582707-31582726 Msa0677530:CDS 25.0%
!! TAGTTTTCTACTAGTGAATT+AGG - chr4_4:31583129-31583148 None:intergenic 25.0%
!! ACATTTTTGTCTTGATTTAG+AGG + chr4_4:31583311-31583330 Msa0677530:three_prime_UTR 25.0%
! CAAGTGCTAAAATATAGATT+AGG + chr4_4:31583349-31583368 Msa0677530:three_prime_UTR 25.0%
! TATACTATGAGAAATGCTAA+CGG + chr4_4:31583394-31583413 Msa0677530:three_prime_UTR 25.0%
!! TTATTGCTCTAGTCTTGTAA+AGG + chr4_4:31578862-31578881 Msa0677530:five_prime_UTR 30.0%
AAGAAGAAAAAGGAGAAAAG+AGG - chr4_4:31578953-31578972 None:intergenic 30.0%
!!! ACAAGGTTGTATTTTAGTGT+TGG + chr4_4:31578994-31579013 Msa0677530:intron 30.0%
!!! CAAGGTTGTATTTTAGTGTT+GGG + chr4_4:31578995-31579014 Msa0677530:intron 30.0%
!!! AAGGTTGTATTTTAGTGTTG+GGG + chr4_4:31578996-31579015 Msa0677530:intron 30.0%
GTTGGGGTTGTTTATAATTT+AGG + chr4_4:31579012-31579031 Msa0677530:intron 30.0%
AAAGTTTATAGCAGCAGAAT+CGG - chr4_4:31579050-31579069 None:intergenic 30.0%
!!! TTTTTTGTGTGTTTTTCCTC+CGG + chr4_4:31579095-31579114 Msa0677530:intron 30.0%
AATACTTCTTCAAAATCCGT+GGG - chr4_4:31579679-31579698 None:intergenic 30.0%
AAATACTTCTTCAAAATCCG+TGG - chr4_4:31579680-31579699 None:intergenic 30.0%
AGAATACACACATTATATGG+TGG - chr4_4:31579851-31579870 None:intergenic 30.0%
ACCATATAATGTGTGTATTC+TGG + chr4_4:31579850-31579869 Msa0677530:five_prime_UTR 30.0%
TCCAGAATACACACATTATA+TGG - chr4_4:31579854-31579873 None:intergenic 30.0%
AAACAAATTTCGAAGCAAGA+TGG - chr4_4:31579959-31579978 None:intergenic 30.0%
! TTTTCACTAATGGAAAGAGT+CGG + chr4_4:31580059-31580078 Msa0677530:CDS 30.0%
ACCACAAAATATCGTATCTT+CGG - chr4_4:31580286-31580305 None:intergenic 30.0%
! ATATTTTGTGGTGTCTTTGA+TGG + chr4_4:31580294-31580313 Msa0677530:CDS 30.0%
! CAAAACGAAAGCAATTTTAC+TGG - chr4_4:31580369-31580388 None:intergenic 30.0%
! CAGTAAAATTGCTTTCGTTT+TGG + chr4_4:31580367-31580386 Msa0677530:CDS 30.0%
CTCTTGAATCGAAACAAAAT+AGG + chr4_4:31580394-31580413 Msa0677530:CDS 30.0%
AATCTCTTCATGGGATATAT+TGG + chr4_4:31580707-31580726 Msa0677530:CDS 30.0%
ATCTCTTCATGGGATATATT+GGG + chr4_4:31580708-31580727 Msa0677530:CDS 30.0%
AAGTTATTCTACTCAATGGT+TGG - chr4_4:31581387-31581406 None:intergenic 30.0%
GAACAAGTTATTCTACTCAA+TGG - chr4_4:31581391-31581410 None:intergenic 30.0%
! GTATCTGATTTTCAATGAGT+GGG + chr4_4:31581637-31581656 Msa0677530:intron 30.0%
!!! ATCAGAATTTTCAAGTAACC+TGG + chr4_4:31581833-31581852 Msa0677530:intron 30.0%
! TTGGTACATGTTAATGCTTT+TGG + chr4_4:31581886-31581905 Msa0677530:intron 30.0%
!!! TTTTGGTTCTAATATGGACT+CGG + chr4_4:31581903-31581922 Msa0677530:intron 30.0%
! GAAAGGAATTAGACTTTTCA+AGG + chr4_4:31581927-31581946 Msa0677530:intron 30.0%
GCCTGCAAATATATGAAATA+TGG + chr4_4:31582008-31582027 Msa0677530:intron 30.0%
GCATGATAATATTGCATATC+TGG + chr4_4:31582178-31582197 Msa0677530:intron 30.0%
TATCAAAAACCTTAGACACA+AGG - chr4_4:31582251-31582270 None:intergenic 30.0%
TTTGATATTGCGTAGAAACA+TGG + chr4_4:31582264-31582283 Msa0677530:intron 30.0%
!! CTGATGTTAACTGATTTTCT+TGG + chr4_4:31582521-31582540 Msa0677530:intron 30.0%
! TCTTGGTATTTTTCTAGGTT+TGG + chr4_4:31582538-31582557 Msa0677530:intron 30.0%
! CTTGGTATTTTTCTAGGTTT+GGG + chr4_4:31582539-31582558 Msa0677530:intron 30.0%
AGAATCAGATTATGATGAAC+AGG + chr4_4:31582734-31582753 Msa0677530:CDS 30.0%
GAATCAGATTATGATGAACA+GGG + chr4_4:31582735-31582754 Msa0677530:CDS 30.0%
GATCTTTCTTCAGAAAATCT+AGG - chr4_4:31582990-31583009 None:intergenic 30.0%
AAACTAATGTTCAATTAGGG+TGG + chr4_4:31583143-31583162 Msa0677530:intron 30.0%
GGTTATTAATTCCTTGCATT+AGG - chr4_4:31583189-31583208 None:intergenic 30.0%
!!! TCTTGATTTAGAGGTGTTTT+TGG + chr4_4:31583320-31583339 Msa0677530:three_prime_UTR 30.0%
ATACTATGAGAAATGCTAAC+GGG + chr4_4:31583395-31583414 Msa0677530:three_prime_UTR 30.0%
! TGGTAATCTGAAATTCGGTT+AGG + chr4_4:31579119-31579138 Msa0677530:intron 35.0%
TCTGAACAAGAATGTTTCAC+AGG + chr4_4:31579154-31579173 Msa0677530:intron 35.0%
!! TCTCTTTCATGCCTTTGTTT+TGG + chr4_4:31579402-31579421 Msa0677530:intron 35.0%
!! TGCTTCGAAATTTGTTTCTG+TGG + chr4_4:31579962-31579981 Msa0677530:CDS 35.0%
TGCTAGGTAAGGATGATAAT+TGG - chr4_4:31580036-31580055 None:intergenic 35.0%
AATTATCATCCTTACCTAGC+AGG + chr4_4:31580035-31580054 Msa0677530:CDS 35.0%
TTTCACTAATGGAAAGAGTC+GGG + chr4_4:31580060-31580079 Msa0677530:CDS 35.0%
TAAGTTATTTGAGGGAGACT+TGG + chr4_4:31580204-31580223 Msa0677530:intron 35.0%
! TCCGAAGATACGATATTTTG+TGG + chr4_4:31580282-31580301 Msa0677530:CDS 35.0%
! CAGACAAAACTTGCTTCAAA+CGG + chr4_4:31580418-31580437 Msa0677530:CDS 35.0%
! CATAAAAGCATACAAGACCA+TGG + chr4_4:31580521-31580540 Msa0677530:CDS 35.0%
TCTCTTCATGGGATATATTG+GGG + chr4_4:31580709-31580728 Msa0677530:CDS 35.0%
! CTCTGATGAGTATATGCTTT+TGG + chr4_4:31580847-31580866 Msa0677530:intron 35.0%
ATTCCAATTTGGTTGGGAAT+AGG + chr4_4:31580885-31580904 Msa0677530:intron 35.0%
! CTATACCTGAATTTTCTCAC+CGG + chr4_4:31581063-31581082 Msa0677530:CDS 35.0%
TTCAATTTCACAGCTAGACA+TGG - chr4_4:31581261-31581280 None:intergenic 35.0%
ACCAGCATATGGTTAATGTT+AGG - chr4_4:31581334-31581353 None:intergenic 35.0%
AACATTAACCATATGCTGGT+AGG + chr4_4:31581334-31581353 Msa0677530:intron 35.0%
GTAGGAAGGAAACTAATAAG+TGG + chr4_4:31581352-31581371 Msa0677530:intron 35.0%
AACATGTCCTGTTTGTCAAT+TGG + chr4_4:31581431-31581450 Msa0677530:intron 35.0%
TTTAGAAACATGCCTTTGCT+GGG + chr4_4:31581587-31581606 Msa0677530:intron 35.0%
! GGTATCTGATTTTCAATGAG+TGG + chr4_4:31581636-31581655 Msa0677530:intron 35.0%
!! GAATTAGACTTTTCAAGGCT+AGG + chr4_4:31581932-31581951 Msa0677530:intron 35.0%
TTGCACTTGCATGTTGTAAA+AGG - chr4_4:31582035-31582054 None:intergenic 35.0%
TGTATCCTCATCAATTAGCA+TGG - chr4_4:31582083-31582102 None:intergenic 35.0%
TTAAAAAGGGACAGATACTG+TGG - chr4_4:31582350-31582369 None:intergenic 35.0%
!!! CACGGACATGGTTTTAAAAA+GGG - chr4_4:31582363-31582382 None:intergenic 35.0%
!!! ACACGGACATGGTTTTAAAA+AGG - chr4_4:31582364-31582383 None:intergenic 35.0%
TAGTATAATTTAGCCCCTGA+AGG + chr4_4:31582486-31582505 Msa0677530:intron 35.0%
CAGTTAACATCAGTGAATGT+AGG - chr4_4:31582514-31582533 None:intergenic 35.0%
!! TTGGGATGTTTTAAGCAATG+AGG + chr4_4:31582557-31582576 Msa0677530:CDS 35.0%
!!! AGTCATCCATTTTTGAAGTC+GGG - chr4_4:31582674-31582693 None:intergenic 35.0%
!!! CAGTCATCCATTTTTGAAGT+CGG - chr4_4:31582675-31582694 None:intergenic 35.0%
!! TGCTGTAGTGTGCTTATTTT+TGG + chr4_4:31582695-31582714 Msa0677530:CDS 35.0%
!!! GTAGTGTGCTTATTTTTGGA+TGG + chr4_4:31582699-31582718 Msa0677530:CDS 35.0%
AATCCAGTTGAATCAGATGA+TGG + chr4_4:31582795-31582814 Msa0677530:CDS 35.0%
!! ATCAGATGATGGACAAAAGT+CGG + chr4_4:31582806-31582825 Msa0677530:CDS 35.0%
GTAAAGTTCCTTCTCAAAGA+TGG - chr4_4:31582834-31582853 None:intergenic 35.0%
AGATCAAAACTGGTTAGGTT+TGG + chr4_4:31582929-31582948 Msa0677530:CDS 35.0%
AAAACTGGTTAGGTTTGGAA+GGG + chr4_4:31582934-31582953 Msa0677530:CDS 35.0%
CTTCAGAAAATCTAGGAAGT+TGG - chr4_4:31582983-31583002 None:intergenic 35.0%
TAACTGTTTATTGCAGTACC+TGG + chr4_4:31583038-31583057 Msa0677530:three_prime_UTR 35.0%
! ATTGATTTCAGCCTAATGCA+AGG + chr4_4:31583175-31583194 Msa0677530:intron 35.0%
AAACTCGAAGTGGTTTGATT+TGG + chr4_4:31583214-31583233 Msa0677530:three_prime_UTR 35.0%
! AACTCGAAGTGGTTTGATTT+GGG + chr4_4:31583215-31583234 Msa0677530:three_prime_UTR 35.0%
AATTGAACATGTTAGATCCG+CGG - chr4_4:31583263-31583282 None:intergenic 35.0%
! AATGAAGTAATGCTTGCTGC+AGG - chr4_4:31578835-31578854 None:intergenic 40.0%
AATTTCAGATTACCAACCGG+AGG - chr4_4:31579114-31579133 None:intergenic 40.0%
CCGAATTTCAGATTACCAAC+CGG - chr4_4:31579117-31579136 None:intergenic 40.0%
!! CCGGTTGGTAATCTGAAATT+CGG + chr4_4:31579114-31579133 Msa0677530:intron 40.0%
TGTTTCACAGGAATCGAACT+CGG + chr4_4:31579166-31579185 Msa0677530:intron 40.0%
CTCGTCACTAATCAAGTGAT+CGG - chr4_4:31579224-31579243 None:intergenic 40.0%
AGCTGAACACAAGAAAACAG+TGG - chr4_4:31579630-31579649 None:intergenic 40.0%
! ACTGTTTTCTTGTGTTCAGC+TGG + chr4_4:31579629-31579648 Msa0677530:intron 40.0%
AGTGAAAATCCTGCTAGGTA+AGG - chr4_4:31580047-31580066 None:intergenic 40.0%
CCATTAGTGAAAATCCTGCT+AGG - chr4_4:31580052-31580071 None:intergenic 40.0%
! CCTAGCAGGATTTTCACTAA+TGG + chr4_4:31580049-31580068 Msa0677530:CDS 40.0%
TTCACTAATGGAAAGAGTCG+GGG + chr4_4:31580061-31580080 Msa0677530:CDS 40.0%
TTCGTGCATATTTACACAGC+AGG + chr4_4:31580084-31580103 Msa0677530:CDS 40.0%
TCGTGCATATTTACACAGCA+GGG + chr4_4:31580085-31580104 Msa0677530:CDS 40.0%
AGGATAAACTGAACTCCACT+TGG + chr4_4:31580487-31580506 Msa0677530:CDS 40.0%
TATGAAAGCTTCTCTCCAAG+TGG - chr4_4:31580505-31580524 None:intergenic 40.0%
CTACAGAAGCAGTCTAGATT+TGG - chr4_4:31580567-31580586 None:intergenic 40.0%
AATCTAGACTGCTTCTGTAG+CGG + chr4_4:31580567-31580586 Msa0677530:CDS 40.0%
ATCTGTGACTGTAGTAAAGC+AGG + chr4_4:31580596-31580615 Msa0677530:CDS 40.0%
CAGGGTTCAAATCTCTTCAT+GGG + chr4_4:31580698-31580717 Msa0677530:intron 40.0%
TATTGGCATAATGACCCACT+TGG - chr4_4:31580818-31580837 None:intergenic 40.0%
TCTCCTATTCCCAACCAAAT+TGG - chr4_4:31580891-31580910 None:intergenic 40.0%
GAAAGAATCAAGCAGTGCAA+GGG + chr4_4:31580915-31580934 Msa0677530:CDS 40.0%
GTTTGGAGATTTCTGCTTGA+AGG + chr4_4:31581025-31581044 Msa0677530:CDS 40.0%
GATTTCTGCTTGAAGGAGTA+TGG + chr4_4:31581032-31581051 Msa0677530:CDS 40.0%
TTCATTGTTCTTGCGTCAGA+TGG + chr4_4:31581107-31581126 Msa0677530:CDS 40.0%
TCATTGTTCTTGCGTCAGAT+GGG + chr4_4:31581108-31581127 Msa0677530:CDS 40.0%
GCCTAACATTAACCATATGC+TGG + chr4_4:31581330-31581349 Msa0677530:intron 40.0%
TTAACCATATGCTGGTAGGA+AGG + chr4_4:31581338-31581357 Msa0677530:intron 40.0%
GAATGTATCCGTGGAATCTT+AGG + chr4_4:31581506-31581525 Msa0677530:intron 40.0%
! CTTTAGAAACATGCCTTTGC+TGG + chr4_4:31581586-31581605 Msa0677530:intron 40.0%
CTGATATTTCAACACAACGC+TGG + chr4_4:31581615-31581634 Msa0677530:intron 40.0%
TGCGTAACACTCTCAAGTTT+AGG + chr4_4:31581796-31581815 Msa0677530:intron 40.0%
CAAGTTTAGGTCTGTGTGAA+AGG + chr4_4:31581809-31581828 Msa0677530:intron 40.0%
!! TCTAATATGGACTCGGTGAA+AGG + chr4_4:31581910-31581929 Msa0677530:intron 40.0%
TCATCAATTAGCATGGCAAG+AGG - chr4_4:31582076-31582095 None:intergenic 40.0%
TCTTGCCATGCTAATTGATG+AGG + chr4_4:31582075-31582094 Msa0677530:intron 40.0%
ACAAATGTGCATTGCCTAAG+TGG + chr4_4:31582100-31582119 Msa0677530:intron 40.0%
TACTATCGTTGATGTGACAG+AGG - chr4_4:31582142-31582161 None:intergenic 40.0%
CTGTCACATCAACGATAGTA+TGG + chr4_4:31582142-31582161 Msa0677530:intron 40.0%
TGGTCATTGAGTGACATTGT+TGG + chr4_4:31582198-31582217 Msa0677530:intron 40.0%
GGTCATTGAGTGACATTGTT+GGG + chr4_4:31582199-31582218 Msa0677530:intron 40.0%
GTCATTGAGTGACATTGTTG+GGG + chr4_4:31582200-31582219 Msa0677530:intron 40.0%
AACCACAATTAACGCCACAT+TGG - chr4_4:31582291-31582310 None:intergenic 40.0%
AGTGAATGTAGGAACCTTCA+GGG - chr4_4:31582503-31582522 None:intergenic 40.0%
!! GGATGTTTTAAGCAATGAGG+AGG + chr4_4:31582560-31582579 Msa0677530:CDS 40.0%
!! TGTTTTAAGCAATGAGGAGG+TGG + chr4_4:31582563-31582582 Msa0677530:CDS 40.0%
GGTGGTTGAGATAGTATCAT+CGG + chr4_4:31582581-31582600 Msa0677530:CDS 40.0%
TTCTGGTAAATTCAGCTGCT+CGG + chr4_4:31582631-31582650 Msa0677530:CDS 40.0%
CAAGTACCCGACTTCAAAAA+TGG + chr4_4:31582665-31582684 Msa0677530:CDS 40.0%
ATTCAACTGGATTCCCAGAA+TGG - chr4_4:31582788-31582807 None:intergenic 40.0%
TGTCCATCATCTGATTCAAC+TGG - chr4_4:31582801-31582820 None:intergenic 40.0%
TCAGAAGAAAACGAGACCAA+CGG + chr4_4:31582864-31582883 Msa0677530:CDS 40.0%
CATCAGGTGAAGATCAAAAC+TGG + chr4_4:31582919-31582938 Msa0677530:CDS 40.0%
GGTGAAGATCAAAACTGGTT+AGG + chr4_4:31582924-31582943 Msa0677530:CDS 40.0%
CAAAACTGGTTAGGTTTGGA+AGG + chr4_4:31582933-31582952 Msa0677530:CDS 40.0%
AAACTGGTTAGGTTTGGAAG+GGG + chr4_4:31582935-31582954 Msa0677530:CDS 40.0%
GAAGCAAGAAATTCAGGAGT+TGG - chr4_4:31583012-31583031 None:intergenic 40.0%
CCTCATGAAGCAAGAAATTC+AGG - chr4_4:31583018-31583037 None:intergenic 40.0%
CCTGAATTTCTTGCTTCATG+AGG + chr4_4:31583015-31583034 Msa0677530:exon 40.0%
TCTTGAATCGAGTGTTTACC+AGG - chr4_4:31583059-31583078 None:intergenic 40.0%
!! GGTAACATTTTGATGCTCCT+TGG + chr4_4:31583100-31583119 Msa0677530:three_prime_UTR 40.0%
ACTAGTGAATTAGGCTACCA+AGG - chr4_4:31583120-31583139 None:intergenic 40.0%
TAACCTAGACAAACTCGAAG+TGG + chr4_4:31583204-31583223 Msa0677530:intron 40.0%
! AAACCACTTCGAGTTTGTCT+AGG - chr4_4:31583210-31583229 None:intergenic 40.0%
AGTTTACAGTTTCAAACCCG+CGG + chr4_4:31583243-31583262 Msa0677530:three_prime_UTR 40.0%
ATTGAACATGTTAGATCCGC+GGG - chr4_4:31583262-31583281 None:intergenic 40.0%
! TTGTGTGTTTTTCCTCCGGT+TGG + chr4_4:31579099-31579118 Msa0677530:intron 45.0%
GTTTCACAGGAATCGAACTC+GGG + chr4_4:31579167-31579186 Msa0677530:intron 45.0%
ATCGAACTCGGGTTCTTAAG+TGG + chr4_4:31579178-31579197 Msa0677530:intron 45.0%
ATCAAGTGATCGGACTCAAG+TGG - chr4_4:31579214-31579233 None:intergenic 45.0%
TAGTGACGAGTGTTATCTCG+TGG + chr4_4:31579234-31579253 Msa0677530:intron 45.0%
ACGTGAGATCTGTACTGGAA+AGG + chr4_4:31579808-31579827 Msa0677530:five_prime_UTR 45.0%
CGTGAGATCTGTACTGGAAA+GGG + chr4_4:31579809-31579828 Msa0677530:five_prime_UTR 45.0%
! AGTCGAAGTACTTGTAGCAG+CGG + chr4_4:31579911-31579930 Msa0677530:CDS 45.0%
TCTGTGGACAAAAGAGAGCA+AGG + chr4_4:31579978-31579997 Msa0677530:CDS 45.0%
GGGAATTAATCAGGATGCCA+TGG + chr4_4:31580114-31580133 Msa0677530:CDS 45.0%
ACTTACTTCCCACACAACCA+TGG - chr4_4:31580134-31580153 None:intergenic 45.0%
! TGTGGTGTCTTTGATGGTCA+TGG + chr4_4:31580300-31580319 Msa0677530:CDS 45.0%
! TTTGATGGTCATGGTCCACA+AGG + chr4_4:31580309-31580328 Msa0677530:CDS 45.0%
ATCTTGTTGCGCGTAAAGTG+AGG + chr4_4:31580334-31580353 Msa0677530:CDS 45.0%
TCTTGTTGCGCGTAAAGTGA+GGG + chr4_4:31580335-31580354 Msa0677530:CDS 45.0%
TGAGAAGGATTGTTCTGCTG+AGG + chr4_4:31580467-31580486 Msa0677530:CDS 45.0%
AGACCATGGACAAAGAGCTT+AGG + chr4_4:31580535-31580554 Msa0677530:CDS 45.0%
AGACCTAAGCTCTTTGTCCA+TGG - chr4_4:31580541-31580560 None:intergenic 45.0%
ATCTAGACTGCTTCTGTAGC+GGG + chr4_4:31580568-31580587 Msa0677530:CDS 45.0%
CCATGAAGAGATTTGAACCC+TGG - chr4_4:31580700-31580719 None:intergenic 45.0%
CCAGGGTTCAAATCTCTTCA+TGG + chr4_4:31580697-31580716 Msa0677530:intron 45.0%
CATGGAGTCATTGCTGTCTT+TGG - chr4_4:31580756-31580775 None:intergenic 45.0%
CAAAGACAGCAATGACTCCA+TGG + chr4_4:31580754-31580773 Msa0677530:CDS 45.0%
AGTCAACTGAATTGCCACCA+TGG - chr4_4:31580774-31580793 None:intergenic 45.0%
! TTGAAGCCTGATTTGCCAAG+TGG + chr4_4:31580800-31580819 Msa0677530:intron 45.0%
! TGAAGCCTGATTTGCCAAGT+GGG + chr4_4:31580801-31580820 Msa0677530:intron 45.0%
AATGACCCACTTGGCAAATC+AGG - chr4_4:31580809-31580828 None:intergenic 45.0%
TTGGTTGGGAATAGGAGAAG+CGG + chr4_4:31580893-31580912 Msa0677530:intron 45.0%
GGAAAGAATCAAGCAGTGCA+AGG + chr4_4:31580914-31580933 Msa0677530:CDS 45.0%
AATCAAGCAGTGCAAGGGTA+GGG + chr4_4:31580920-31580939 Msa0677530:CDS 45.0%
AAGATGAGCCTGAAGTTCCT+AGG + chr4_4:31580955-31580974 Msa0677530:CDS 45.0%
AGATGAGCCTGAAGTTCCTA+GGG + chr4_4:31580956-31580975 Msa0677530:CDS 45.0%
CATTGTTCTTGCGTCAGATG+GGG + chr4_4:31581109-31581128 Msa0677530:CDS 45.0%
GTTTCCTTCCTACCAGCATA+TGG - chr4_4:31581345-31581364 None:intergenic 45.0%
CACACTGCCAATTGACAAAC+AGG - chr4_4:31581441-31581460 None:intergenic 45.0%
CGGATACATTCAAGCACAAC+AGG - chr4_4:31581497-31581516 None:intergenic 45.0%
GTTGTGCTTGAATGTATCCG+TGG + chr4_4:31581497-31581516 Msa0677530:intron 45.0%
TCCGTGGAATCTTAGGAGTT+CGG + chr4_4:31581513-31581532 Msa0677530:intron 45.0%
TCCGAACTCCTAAGATTCCA+CGG - chr4_4:31581517-31581536 None:intergenic 45.0%
AAACATGCCTTTGCTGGGTT+TGG + chr4_4:31581592-31581611 Msa0677530:intron 45.0%
ATATCAGCCAAACCCAGCAA+AGG - chr4_4:31581602-31581621 None:intergenic 45.0%
AAGCGCATCCCTTCTATGAT+TGG - chr4_4:31581672-31581691 None:intergenic 45.0%
GTGAAGCTTCCTTGTGTCTA+AGG + chr4_4:31582239-31582258 Msa0677530:intron 45.0%
CGTAGAAACATGGTCCAATG+TGG + chr4_4:31582274-31582293 Msa0677530:intron 45.0%
GTCCAATGTGGCGTTAATTG+TGG + chr4_4:31582286-31582305 Msa0677530:intron 45.0%
TGTGGCGTTAATTGTGGTTG+CGG + chr4_4:31582292-31582311 Msa0677530:intron 45.0%
TCATGCAGTAGAGACAGACA+CGG - chr4_4:31582381-31582400 None:intergenic 45.0%
GTGAATGTAGGAACCTTCAG+GGG - chr4_4:31582502-31582521 None:intergenic 45.0%
CAGTGAATGTAGGAACCTTC+AGG - chr4_4:31582504-31582523 None:intergenic 45.0%
ATCATCTGCAGCAAGGATTC+TGG + chr4_4:31582614-31582633 Msa0677530:CDS 45.0%
TCTGGTAAATTCAGCTGCTC+GGG + chr4_4:31582632-31582651 Msa0677530:CDS 45.0%
TAAATTCAGCTGCTCGGGAA+TGG + chr4_4:31582637-31582656 Msa0677530:CDS 45.0%
GTTGAAGATGAAGCAGCATC+AGG + chr4_4:31582903-31582922 Msa0677530:CDS 45.0%
!!! TTTTATTTTTATTTTACATT+TGG + chr4_4:31579559-31579578 Msa0677530:intron 5.0%
!! AAATTATTTAAAAAATAGAT+GGG - chr4_4:31581770-31581789 None:intergenic 5.0%
! GTGTTATCTCGTGGCTTGCA+AGG + chr4_4:31579243-31579262 Msa0677530:intron 50.0%
TCCGTTCAAATAGCGTCCCA+CGG + chr4_4:31579660-31579679 Msa0677530:five_prime_UTR 50.0%
TCCGTGGGACGCTATTTGAA+CGG - chr4_4:31579664-31579683 None:intergenic 50.0%
TGCGAACGTGAGATCTGTAC+TGG + chr4_4:31579803-31579822 Msa0677530:five_prime_UTR 50.0%
! GTCGAAGTACTTGTAGCAGC+GGG + chr4_4:31579912-31579931 Msa0677530:CDS 50.0%
ATTTACACAGCAGGGTCGCA+AGG + chr4_4:31580093-31580112 Msa0677530:CDS 50.0%
TTTACACAGCAGGGTCGCAA+GGG + chr4_4:31580094-31580113 Msa0677530:CDS 50.0%
GGGTCGCAAGGGAATTAATC+AGG + chr4_4:31580105-31580124 Msa0677530:CDS 50.0%
ATCAGGATGCCATGGTTGTG+TGG + chr4_4:31580122-31580141 Msa0677530:CDS 50.0%
TCAGGATGCCATGGTTGTGT+GGG + chr4_4:31580123-31580142 Msa0677530:CDS 50.0%
CGGAACATAACACCAGACTG+TGG + chr4_4:31580438-31580457 Msa0677530:CDS 50.0%
TTCTCAGACTCTCCACAGTC+TGG - chr4_4:31580453-31580472 None:intergenic 50.0%
AGACTGTGGAGAGTCTGAGA+AGG + chr4_4:31580452-31580471 Msa0677530:CDS 50.0%
TGGGGATTCTCGAGCAATCA+TGG + chr4_4:31580727-31580746 Msa0677530:CDS 50.0%
GGGGATTCTCGAGCAATCAT+GGG + chr4_4:31580728-31580747 Msa0677530:CDS 50.0%
AGACAGCAATGACTCCATGG+TGG + chr4_4:31580757-31580776 Msa0677530:CDS 50.0%
GAATCAAGCAGTGCAAGGGT+AGG + chr4_4:31580919-31580938 Msa0677530:CDS 50.0%
!!! TGCCTTTTGATGACGCACCA+GGG + chr4_4:31580985-31581004 Msa0677530:CDS 50.0%
AACCCTGGTGCGTCATCAAA+AGG - chr4_4:31580990-31581009 None:intergenic 50.0%
! ACCAGGGTTAGCAATGGCTA+GGG + chr4_4:31581001-31581020 Msa0677530:CDS 50.0%
! TTAGCAATGGCTAGGGCGTT+TGG + chr4_4:31581008-31581027 Msa0677530:CDS 50.0%
AGCAGCCGGTGAGAAAATTC+AGG - chr4_4:31581071-31581090 None:intergenic 50.0%
TGGTCAGGGTAGCTACATCA+AGG - chr4_4:31582330-31582349 None:intergenic 50.0%
AGGGACAGATACTGTGGTCA+GGG - chr4_4:31582344-31582363 None:intergenic 50.0%
AAGGGACAGATACTGTGGTC+AGG - chr4_4:31582345-31582364 None:intergenic 50.0%
AGTAGAGACAGACACGGACA+TGG - chr4_4:31582375-31582394 None:intergenic 50.0%
CTTGCTGCAGATGATCGTGT+TGG - chr4_4:31582609-31582628 None:intergenic 50.0%
CAACACGATCATCTGCAGCA+AGG + chr4_4:31582607-31582626 Msa0677530:CDS 50.0%
ACCATCCAGAGCAACCATTC+TGG + chr4_4:31582771-31582790 Msa0677530:CDS 50.0%
CCATCCAGAGCAACCATTCT+GGG + chr4_4:31582772-31582791 Msa0677530:CDS 50.0%
GATTCCCAGAATGGTTGCTC+TGG - chr4_4:31582779-31582798 None:intergenic 50.0%
! AGTCGGAGCCATCTTTGAGA+AGG + chr4_4:31582823-31582842 Msa0677530:CDS 50.0%
ACTTGTAGCAGCGGGAGCAA+TGG + chr4_4:31579920-31579939 Msa0677530:CDS 55.0%
CGCGCAACAAGATGACCTTG+TGG - chr4_4:31580327-31580346 None:intergenic 55.0%
AGCCTGAAGTTCCTAGGGTG+TGG + chr4_4:31580961-31580980 Msa0677530:CDS 55.0%
AGCCACACCCTAGGAACTTC+AGG - chr4_4:31580966-31580985 None:intergenic 55.0%
TCAAAAGGCAGCCACACCCT+AGG - chr4_4:31580975-31580994 None:intergenic 55.0%
!!! CTGCCTTTTGATGACGCACC+AGG + chr4_4:31580984-31581003 Msa0677530:CDS 55.0%
! TGACGCACCAGGGTTAGCAA+TGG + chr4_4:31580995-31581014 Msa0677530:CDS 55.0%
! CACCAGGGTTAGCAATGGCT+AGG + chr4_4:31581000-31581019 Msa0677530:CDS 55.0%
GATCTCTGTCTGTGAGCAGC+CGG - chr4_4:31581085-31581104 None:intergenic 55.0%
! CCCAGAATGGTTGCTCTGGA+TGG - chr4_4:31582775-31582794 None:intergenic 55.0%
ATCGACAGACACTGCTCCGT+TGG - chr4_4:31582883-31582902 None:intergenic 55.0%
GCCCTAGCCATTGCTAACCC+TGG - chr4_4:31581005-31581024 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 31578832 31583423 31578832 ID=Msa0677530;Name=Msa0677530
chr4_4 mRNA 31578832 31583423 31578832 ID=Msa0677530-mRNA-1;Parent=Msa0677530;Name=Msa0677530-mRNA-1;_AED=0.15;_eAED=0.15;_QI=291|1|1|1|0.66|0.42|7|343|470
chr4_4 exon 31578832 31578883 31578832 ID=Msa0677530-mRNA-1:exon:7816;Parent=Msa0677530-mRNA-1
chr4_4 exon 31579648 31580147 31579648 ID=Msa0677530-mRNA-1:exon:7817;Parent=Msa0677530-mRNA-1
chr4_4 exon 31580273 31580617 31580273 ID=Msa0677530-mRNA-1:exon:7818;Parent=Msa0677530-mRNA-1
chr4_4 exon 31580701 31580818 31580701 ID=Msa0677530-mRNA-1:exon:7819;Parent=Msa0677530-mRNA-1
chr4_4 exon 31580907 31581130 31580907 ID=Msa0677530-mRNA-1:exon:7820;Parent=Msa0677530-mRNA-1
chr4_4 exon 31582555 31583145 31582555 ID=Msa0677530-mRNA-1:exon:7821;Parent=Msa0677530-mRNA-1
chr4_4 exon 31583207 31583423 31583207 ID=Msa0677530-mRNA-1:exon:7822;Parent=Msa0677530-mRNA-1
chr4_4 five_prime_UTR 31578832 31578883 31578832 ID=Msa0677530-mRNA-1:five_prime_utr;Parent=Msa0677530-mRNA-1
chr4_4 five_prime_UTR 31579648 31579886 31579648 ID=Msa0677530-mRNA-1:five_prime_utr;Parent=Msa0677530-mRNA-1
chr4_4 CDS 31579887 31580147 31579887 ID=Msa0677530-mRNA-1:cds;Parent=Msa0677530-mRNA-1
chr4_4 CDS 31580273 31580617 31580273 ID=Msa0677530-mRNA-1:cds;Parent=Msa0677530-mRNA-1
chr4_4 CDS 31580701 31580818 31580701 ID=Msa0677530-mRNA-1:cds;Parent=Msa0677530-mRNA-1
chr4_4 CDS 31580907 31581130 31580907 ID=Msa0677530-mRNA-1:cds;Parent=Msa0677530-mRNA-1
chr4_4 CDS 31582555 31583019 31582555 ID=Msa0677530-mRNA-1:cds;Parent=Msa0677530-mRNA-1
chr4_4 three_prime_UTR 31583020 31583145 31583020 ID=Msa0677530-mRNA-1:three_prime_utr;Parent=Msa0677530-mRNA-1
chr4_4 three_prime_UTR 31583207 31583423 31583207 ID=Msa0677530-mRNA-1:three_prime_utr;Parent=Msa0677530-mRNA-1
Gene Sequence

>Msa0677530

ATGGGTTGTTGTGTCTCAACGAGCAGTCGAAGTACTTGTAGCAGCGGGAGCAATGGAGAGATGATAACTCCATCTTGCTTCGAAATTTGTTTCTGTGGACAAAAGAGAGCAAGGAGAACATTTTCTGATCATGCTATTTCTCTACACCAATTATCATCCTTACCTAGCAGGATTTTCACTAATGGAAAGAGTCGGGGTTCGTGCATATTTACACAGCAGGGTCGCAAGGGAATTAATCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTCCGAAGATACGATATTTTGTGGTGTCTTTGATGGTCATGGTCCACAAGGTCATCTTGTTGCGCGTAAAGTGAGGGATACATTGCCAGTAAAATTGCTTTCGTTTTGGCATTCTCTTGAATCGAAACAAAATAGGTCAGACAAAACTTGCTTCAAACGGAACATAACACCAGACTGTGGAGAGTCTGAGAAGGATTGTTCTGCTGAGGATAAACTGAACTCCACTTGGAGAGAAGCTTTCATAAAAGCATACAAGACCATGGACAAAGAGCTTAGGTCTTATCCAAATCTAGACTGCTTCTGTAGCGGGAGCACATCTGTGACTGTAGTAAAGCAGGGTTCAAATCTCTTCATGGGATATATTGGGGATTCTCGAGCAATCATGGGATCCAAAGACAGCAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCGGAAAGAATCAAGCAGTGCAAGGGTAGGGTTTTTGCTTTGCAAGATGAGCCTGAAGTTCCTAGGGTGTGGCTGCCTTTTGATGACGCACCAGGGTTAGCAATGGCTAGGGCGTTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTCACAGACAGAGATCAATTCATTGTTCTTGCGTCAGATGGGGTTTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAGATAGTATCATCGGCACCAACACGATCATCTGCAGCAAGGATTCTGGTAAATTCAGCTGCTCGGGAATGGAAACTCAAGTACCCGACTTCAAAAATGGATGACTGTGCTGTAGTGTGCTTATTTTTGGATGGTAAAATGGACTCAGAATCAGATTATGATGAACAGGGCTTCTCTTCTGCAACCATCCAGAGCAACCATTCTGGGAATCCAGTTGAATCAGATGATGGACAAAAGTCGGAGCCATCTTTGAGAAGGAACTTTACTGTGAGATCATCAGAAGAAAACGAGACCAACGGAGCAGTGTCTGTCGATGTTGAAGATGAAGCAGCATCAGGTGAAGATCAAAACTGGTTAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTCGTCCAACTTCCTAGATTTTCTGAAGAAAGATCCAACTCCTGA
Protein sequence

>Msa0677530

MGCCVSTSSRSTCSSGSNGEMITPSCFEICFCGQKRARRTFSDHAISLHQLSSLPSRIFTNGKSRGSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPQGHLVARKVRDTLPVKLLSFWHSLESKQNRSDKTCFKRNITPDCGESEKDCSAEDKLNSTWREAFIKAYKTMDKELRSYPNLDCFCSGSTSVTVVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVNSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPVESDDGQKSEPSLRRNFTVRSSEENETNGAVSVDVEDEAASGEDQNWLGLEGVTRVNSLVQLPRFSEERSNS*