Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0611640 | XP_003608019.2 | 89.066 | 503 | 6 | 2 | 1 | 503 | 1 | 454 | 0.0 | 906 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0611640 | sp|Q9LEB3|RBP47_NICPL | 55.511 | 499 | 137 | 10 | 6 | 503 | 2 | 416 | 1.27e-155 | 452 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017300 | Msa0611640 | -0.808880 | 2.491942e-50 | -8.615850e-47 |
Msa0024500 | Msa0611640 | -0.805351 | 1.392169e-49 | -8.615850e-47 |
Msa0037180 | Msa0611640 | 0.825961 | 3.523532e-54 | -8.615850e-47 |
Msa0040860 | Msa0611640 | -0.814006 | 1.919202e-51 | -8.615850e-47 |
Msa0103830 | Msa0611640 | 0.808013 | 3.814407e-50 | -8.615850e-47 |
Msa0610700 | Msa0611640 | -0.800034 | 1.741938e-48 | -8.615850e-47 |
Msa0611640 | Msa0621670 | -0.813406 | 2.600813e-51 | -8.615850e-47 |
Msa0611640 | Msa0657110 | -0.817150 | 3.829206e-52 | -8.615850e-47 |
Msa0611640 | Msa0701090 | -0.821381 | 4.161077e-53 | -8.615850e-47 |
Msa0611640 | Msa0753270 | 0.805281 | 1.439824e-49 | -8.615850e-47 |
Msa0611640 | Msa0769910 | -0.801773 | 7.687276e-49 | -8.615850e-47 |
Msa0611640 | Msa0805390 | 0.847314 | 1.251107e-59 | -8.615850e-47 |
Msa0611640 | Msa0807870 | -0.823122 | 1.641775e-53 | -8.615850e-47 |
Msa0611640 | Msa0832520 | 0.820795 | 5.678546e-53 | -8.615850e-47 |
Msa0611640 | Msa0842750 | 0.807821 | 4.191422e-50 | -8.615850e-47 |
Msa0611640 | Msa0975960 | 0.809019 | 2.327260e-50 | -8.615850e-47 |
Msa0611640 | Msa1212830 | 0.825975 | 3.496930e-54 | -8.615850e-47 |
Msa0611640 | Msa1213040 | 0.827991 | 1.152177e-54 | -8.615850e-47 |
Msa0611640 | Msa1213470 | -0.825718 | 4.024189e-54 | -8.615850e-47 |
Msa0611640 | Msa1260220 | 0.824526 | 7.695009e-54 | -8.615850e-47 |
Msa0611640 | Msa1300370 | -0.826485 | 2.644257e-54 | -8.615850e-47 |
Msa0611640 | Msa1357990 | 0.818832 | 1.595737e-52 | -8.615850e-47 |
Msa0611640 | Msa1368390 | 0.808735 | 2.676135e-50 | -8.615850e-47 |
Msa0611640 | Msa1372000 | 0.813912 | 2.013226e-51 | -8.615850e-47 |
Msa0611640 | Msa1414780 | -0.812410 | 4.299250e-51 | -8.615850e-47 |
Msa0611640 | Msa1433870 | 0.804243 | 2.371809e-49 | -8.615850e-47 |
Msa0611640 | Msa1453430 | 0.869078 | 4.052635e-66 | -8.615850e-47 |
Msa0611640 | Msa1454500 | 0.800735 | 1.253702e-48 | -8.615850e-47 |
Msa0611640 | Msa1457770 | 0.819507 | 1.119936e-52 | -8.615850e-47 |
Msa0138990 | Msa0611640 | -0.807316 | 5.365657e-50 | -8.615850e-47 |
Msa0177320 | Msa0611640 | 0.834240 | 3.359796e-56 | -8.615850e-47 |
Msa0216150 | Msa0611640 | -0.804738 | 1.870636e-49 | -8.615850e-47 |
Msa0386880 | Msa0611640 | 0.820191 | 7.813811e-53 | -8.615850e-47 |
Msa0423550 | Msa0611640 | 0.801545 | 8.561214e-49 | -8.615850e-47 |
Msa0465500 | Msa0611640 | 0.800487 | 1.408517e-48 | -8.615850e-47 |
Msa0478430 | Msa0611640 | 0.804099 | 2.541629e-49 | -8.615850e-47 |
Msa0256540 | Msa0611640 | 0.817803 | 2.728926e-52 | -8.615850e-47 |
Msa0262440 | Msa0611640 | 0.825439 | 4.684626e-54 | -8.615850e-47 |
Msa0308750 | Msa0611640 | 0.812698 | 3.719114e-51 | -8.615850e-47 |
Msa0309990 | Msa0611640 | 0.802199 | 6.284689e-49 | -8.615850e-47 |
Msa0316740 | Msa0611640 | 0.813730 | 2.207401e-51 | -8.615850e-47 |
Msa0326710 | Msa0611640 | 0.806158 | 9.424196e-50 | -8.615850e-47 |
Msa0334450 | Msa0611640 | -0.808385 | 3.178820e-50 | -8.615850e-47 |
Msa0511440 | Msa0611640 | 0.808317 | 3.286770e-50 | -8.615850e-47 |
Msa0563440 | Msa0611640 | 0.832626 | 8.492238e-56 | -8.615850e-47 |
Msa0588110 | Msa0611640 | -0.807061 | 6.074459e-50 | -8.615850e-47 |
Msa0600350 | Msa0611640 | 0.828301 | 9.701185e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0611640 | MtrunA17_Chr4g0045221 | 89.066 | 503 | 6 | 2 | 1 | 503 | 1 | 454 | 0.0 | 906 |
Msa0611640 | MtrunA17_Chr1g0153871 | 50.877 | 456 | 137 | 8 | 4 | 459 | 3 | 371 | 2.03e-139 | 409 |
Msa0611640 | MtrunA17_Chr3g0133651 | 46.627 | 504 | 159 | 11 | 5 | 497 | 4 | 408 | 3.03e-139 | 407 |
Msa0611640 | MtrunA17_Chr2g0288251 | 50.689 | 363 | 113 | 5 | 103 | 464 | 45 | 342 | 5.31e-116 | 347 |
Msa0611640 | MtrunA17_Chr4g0074711 | 43.579 | 475 | 145 | 10 | 31 | 493 | 25 | 388 | 3.53e-114 | 343 |
Msa0611640 | MtrunA17_Chr2g0328791 | 46.970 | 396 | 142 | 7 | 107 | 488 | 6 | 347 | 2.88e-112 | 339 |
Msa0611640 | MtrunA17_Chr4g0070231 | 30.855 | 269 | 168 | 8 | 118 | 382 | 46 | 300 | 1.06e-30 | 123 |
Msa0611640 | MtrunA17_Chr4g0070231 | 27.830 | 212 | 116 | 6 | 120 | 302 | 133 | 336 | 2.21e-14 | 75.1 |
Msa0611640 | MtrunA17_Chr3g0139111 | 33.333 | 270 | 151 | 10 | 118 | 377 | 60 | 310 | 3.96e-30 | 122 |
Msa0611640 | MtrunA17_Chr3g0139111 | 27.830 | 212 | 117 | 5 | 120 | 302 | 147 | 351 | 6.00e-14 | 73.9 |
Msa0611640 | MtrunA17_Chr8g0344491 | 29.712 | 313 | 182 | 11 | 80 | 385 | 41 | 322 | 1.49e-29 | 120 |
Msa0611640 | MtrunA17_Chr7g0265341 | 27.574 | 272 | 139 | 9 | 119 | 378 | 71 | 296 | 3.03e-22 | 100 |
Msa0611640 | MtrunA17_Chr7g0265341 | 29.630 | 270 | 151 | 10 | 117 | 376 | 157 | 397 | 1.25e-20 | 95.5 |
Msa0611640 | MtrunA17_Chr3g0110211 | 28.718 | 195 | 128 | 3 | 119 | 313 | 26 | 209 | 2.39e-19 | 89.7 |
Msa0611640 | MtrunA17_Chr4g0058151 | 32.275 | 189 | 119 | 4 | 114 | 299 | 118 | 300 | 3.23e-19 | 88.2 |
Msa0611640 | MtrunA17_Chr3g0116631 | 33.333 | 195 | 118 | 5 | 112 | 301 | 103 | 290 | 3.41e-19 | 88.2 |
Msa0611640 | MtrunA17_Chr3g0134141 | 26.506 | 249 | 144 | 7 | 119 | 367 | 25 | 234 | 3.77e-19 | 90.9 |
Msa0611640 | MtrunA17_Chr3g0134141 | 25.830 | 271 | 160 | 10 | 120 | 379 | 114 | 354 | 5.15e-14 | 74.7 |
Msa0611640 | MtrunA17_Chr3g0134141 | 27.861 | 201 | 136 | 5 | 103 | 297 | 188 | 385 | 2.59e-13 | 72.4 |
Msa0611640 | MtrunA17_Chr1g0177101 | 29.444 | 180 | 121 | 3 | 118 | 294 | 108 | 284 | 6.98e-18 | 84.3 |
Msa0611640 | MtrunA17_Chr4g0044541 | 26.000 | 250 | 144 | 7 | 119 | 367 | 35 | 244 | 1.09e-17 | 86.3 |
Msa0611640 | MtrunA17_Chr4g0044541 | 27.041 | 196 | 110 | 6 | 120 | 297 | 215 | 395 | 7.36e-13 | 71.2 |
Msa0611640 | MtrunA17_Chr1g0153181 | 27.536 | 276 | 150 | 9 | 120 | 379 | 122 | 363 | 2.04e-17 | 85.5 |
Msa0611640 | MtrunA17_Chr1g0153181 | 26.104 | 249 | 145 | 7 | 119 | 367 | 33 | 242 | 5.64e-16 | 80.9 |
Msa0611640 | MtrunA17_Chr1g0153181 | 29.126 | 206 | 124 | 6 | 105 | 297 | 198 | 394 | 1.05e-15 | 80.1 |
Msa0611640 | MtrunA17_Chr6g0466501 | 24.603 | 252 | 147 | 5 | 116 | 367 | 23 | 231 | 3.23e-17 | 84.7 |
Msa0611640 | MtrunA17_Chr6g0466501 | 26.106 | 226 | 154 | 6 | 104 | 320 | 187 | 408 | 9.40e-12 | 67.4 |
Msa0611640 | MtrunA17_Chr1g0179701 | 24.715 | 263 | 154 | 7 | 119 | 376 | 63 | 286 | 1.61e-16 | 82.4 |
Msa0611640 | MtrunA17_Chr1g0179701 | 27.341 | 267 | 151 | 10 | 120 | 376 | 152 | 385 | 5.92e-16 | 80.5 |
Msa0611640 | MtrunA17_Chr7g0267571 | 26.442 | 208 | 137 | 4 | 105 | 302 | 96 | 297 | 1.95e-16 | 80.5 |
Msa0611640 | MtrunA17_Chr1g0201151 | 25.100 | 251 | 145 | 7 | 119 | 367 | 31 | 240 | 7.40e-16 | 80.5 |
Msa0611640 | MtrunA17_Chr1g0201151 | 26.217 | 267 | 165 | 10 | 120 | 379 | 120 | 361 | 7.83e-15 | 77.4 |
Msa0611640 | MtrunA17_Chr1g0201151 | 28.495 | 186 | 121 | 6 | 120 | 297 | 211 | 392 | 9.48e-13 | 70.9 |
Msa0611640 | MtrunA17_Chr6g0465751 | 23.413 | 252 | 150 | 5 | 116 | 367 | 23 | 231 | 1.38e-15 | 79.7 |
Msa0611640 | MtrunA17_Chr6g0465751 | 26.106 | 226 | 154 | 6 | 104 | 320 | 187 | 408 | 6.96e-12 | 67.8 |
Msa0611640 | MtrunA17_Chr3g0101061 | 28.230 | 209 | 124 | 7 | 109 | 304 | 31 | 226 | 1.28e-13 | 73.2 |
Msa0611640 | MtrunA17_Chr1g0190211 | 40.789 | 76 | 44 | 1 | 215 | 290 | 131 | 205 | 2.01e-13 | 70.1 |
Msa0611640 | MtrunA17_Chr1g0181111 | 28.571 | 196 | 123 | 3 | 120 | 299 | 86 | 280 | 4.22e-13 | 69.7 |
Msa0611640 | MtrunA17_Chr5g0402191 | 27.124 | 306 | 175 | 10 | 129 | 410 | 15 | 296 | 5.17e-13 | 70.9 |
Msa0611640 | MtrunA17_Chr1g0168601 | 31.788 | 151 | 95 | 4 | 148 | 298 | 92 | 234 | 8.43e-13 | 68.2 |
Msa0611640 | MtrunA17_Chr6g0465691 | 26.106 | 226 | 154 | 6 | 104 | 320 | 105 | 326 | 6.17e-12 | 67.8 |
Msa0611640 | MtrunA17_Chr5g0447761 | 28.788 | 198 | 115 | 7 | 120 | 304 | 8 | 192 | 7.75e-12 | 67.4 |
Msa0611640 | MtrunA17_Chr6g0449481 | 22.549 | 204 | 145 | 5 | 101 | 302 | 26 | 218 | 1.44e-11 | 66.2 |
Msa0611640 | MtrunA17_Chr0c09g0493511 | 26.190 | 210 | 143 | 5 | 120 | 320 | 120 | 326 | 1.52e-11 | 66.6 |
Msa0611640 | MtrunA17_Chr8g0375101 | 25.763 | 295 | 178 | 11 | 115 | 384 | 2 | 280 | 7.71e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0611640 | AT3G19130.1 | 56.782 | 435 | 104 | 10 | 43 | 465 | 40 | 402 | 1.28e-154 | 447 |
Msa0611640 | AT1G49600.1 | 57.692 | 390 | 104 | 7 | 115 | 503 | 116 | 445 | 1.36e-143 | 420 |
Msa0611640 | AT1G49600.3 | 59.064 | 342 | 83 | 3 | 115 | 456 | 116 | 400 | 5.60e-136 | 400 |
Msa0611640 | AT1G49600.2 | 59.064 | 342 | 83 | 3 | 115 | 456 | 116 | 400 | 5.60e-136 | 400 |
Msa0611640 | AT1G47490.1 | 50.457 | 438 | 137 | 10 | 73 | 497 | 48 | 418 | 1.52e-132 | 391 |
Msa0611640 | AT1G47500.1 | 52.334 | 407 | 124 | 8 | 94 | 497 | 81 | 420 | 1.03e-128 | 382 |
Msa0611640 | AT1G11650.2 | 48.413 | 378 | 121 | 8 | 115 | 490 | 59 | 364 | 6.86e-111 | 335 |
Msa0611640 | AT5G19350.2 | 43.552 | 411 | 153 | 6 | 115 | 502 | 21 | 375 | 3.98e-108 | 328 |
Msa0611640 | AT5G19350.1 | 43.689 | 412 | 155 | 6 | 115 | 502 | 21 | 379 | 1.19e-107 | 327 |
Msa0611640 | AT5G54900.1 | 44.703 | 387 | 147 | 4 | 101 | 486 | 43 | 363 | 1.75e-105 | 320 |
Msa0611640 | AT4G27000.1 | 48.857 | 350 | 110 | 5 | 116 | 464 | 78 | 359 | 2.04e-103 | 316 |
Msa0611640 | AT1G11650.1 | 56.343 | 268 | 94 | 5 | 115 | 380 | 59 | 305 | 1.79e-101 | 307 |
Msa0611640 | AT1G47490.2 | 53.929 | 280 | 98 | 7 | 73 | 340 | 48 | 308 | 5.31e-91 | 280 |
Msa0611640 | AT1G47500.2 | 56.250 | 256 | 91 | 5 | 94 | 347 | 81 | 317 | 6.22e-86 | 268 |
Msa0611640 | AT1G54080.1 | 31.707 | 328 | 179 | 11 | 54 | 377 | 26 | 312 | 4.53e-38 | 144 |
Msa0611640 | AT1G54080.1 | 27.919 | 197 | 109 | 5 | 120 | 290 | 150 | 339 | 2.99e-11 | 65.9 |
Msa0611640 | AT3G14100.1 | 34.328 | 268 | 158 | 8 | 114 | 377 | 55 | 308 | 1.39e-36 | 140 |
Msa0611640 | AT3G14100.1 | 27.473 | 182 | 98 | 4 | 120 | 275 | 146 | 319 | 9.21e-12 | 67.4 |
Msa0611640 | AT1G54080.2 | 31.325 | 332 | 179 | 12 | 54 | 377 | 26 | 316 | 2.73e-36 | 140 |
Msa0611640 | AT1G17370.1 | 34.074 | 270 | 160 | 8 | 114 | 379 | 50 | 305 | 2.30e-35 | 137 |
Msa0611640 | AT1G17370.1 | 28.934 | 197 | 107 | 5 | 120 | 290 | 141 | 330 | 1.39e-12 | 70.1 |
Msa0611640 | AT1G17370.2 | 32.895 | 304 | 166 | 11 | 80 | 379 | 33 | 302 | 4.75e-35 | 136 |
Msa0611640 | AT1G17370.2 | 28.205 | 195 | 108 | 5 | 120 | 290 | 141 | 327 | 7.44e-13 | 70.9 |
Msa0611640 | AT2G23350.1 | 29.670 | 273 | 153 | 11 | 117 | 379 | 133 | 376 | 2.67e-21 | 97.8 |
Msa0611640 | AT2G23350.1 | 27.885 | 208 | 127 | 7 | 104 | 297 | 209 | 407 | 2.65e-14 | 76.3 |
Msa0611640 | AT2G23350.1 | 24.400 | 250 | 148 | 6 | 119 | 367 | 47 | 256 | 1.44e-12 | 70.5 |
Msa0611640 | AT4G34110.1 | 31.227 | 269 | 148 | 10 | 120 | 379 | 126 | 366 | 5.14e-21 | 97.1 |
Msa0611640 | AT4G34110.1 | 25.373 | 268 | 156 | 8 | 119 | 381 | 37 | 265 | 1.81e-17 | 85.9 |
Msa0611640 | AT4G34110.1 | 27.551 | 196 | 109 | 6 | 120 | 297 | 217 | 397 | 3.59e-14 | 75.5 |
Msa0611640 | AT2G36660.1 | 24.906 | 265 | 153 | 7 | 119 | 378 | 25 | 248 | 5.42e-20 | 94.0 |
Msa0611640 | AT2G36660.1 | 23.664 | 262 | 169 | 7 | 120 | 376 | 114 | 349 | 2.33e-12 | 69.7 |
Msa0611640 | AT5G50250.1 | 32.778 | 180 | 115 | 3 | 114 | 293 | 110 | 283 | 1.81e-18 | 86.3 |
Msa0611640 | AT1G49760.1 | 25.926 | 297 | 188 | 8 | 120 | 408 | 135 | 407 | 2.36e-18 | 89.0 |
Msa0611640 | AT1G49760.1 | 27.138 | 269 | 150 | 7 | 119 | 381 | 46 | 274 | 1.01e-16 | 83.6 |
Msa0611640 | AT1G49760.2 | 25.926 | 297 | 188 | 8 | 120 | 408 | 135 | 407 | 2.36e-18 | 89.0 |
Msa0611640 | AT1G49760.2 | 27.138 | 269 | 150 | 7 | 119 | 381 | 46 | 274 | 1.01e-16 | 83.6 |
Msa0611640 | AT4G24770.1 | 32.105 | 190 | 119 | 4 | 114 | 299 | 146 | 329 | 9.28e-18 | 84.7 |
Msa0611640 | AT4G24770.2 | 32.105 | 190 | 119 | 4 | 114 | 299 | 146 | 329 | 9.28e-18 | 84.7 |
Msa0611640 | AT1G34140.1 | 26.394 | 269 | 163 | 8 | 120 | 381 | 33 | 273 | 1.39e-17 | 85.1 |
Msa0611640 | AT1G34140.1 | 28.108 | 185 | 123 | 5 | 120 | 297 | 121 | 302 | 9.86e-13 | 70.5 |
Msa0611640 | AT1G71770.1 | 26.515 | 264 | 163 | 9 | 120 | 376 | 148 | 387 | 1.51e-17 | 86.3 |
Msa0611640 | AT1G71770.1 | 24.900 | 249 | 149 | 6 | 119 | 367 | 60 | 270 | 7.26e-16 | 80.9 |
Msa0611640 | AT1G71770.2 | 26.515 | 264 | 163 | 9 | 120 | 376 | 148 | 387 | 1.51e-17 | 86.3 |
Msa0611640 | AT1G71770.2 | 24.900 | 249 | 149 | 6 | 119 | 367 | 60 | 270 | 7.26e-16 | 80.9 |
Msa0611640 | AT3G52380.1 | 27.919 | 197 | 131 | 4 | 108 | 297 | 107 | 299 | 7.85e-17 | 82.0 |
Msa0611640 | AT2G18510.1 | 27.473 | 182 | 121 | 3 | 119 | 300 | 26 | 196 | 9.34e-17 | 82.4 |
Msa0611640 | AT3G13224.3 | 28.125 | 192 | 128 | 5 | 118 | 308 | 10 | 192 | 2.74e-16 | 80.9 |
Msa0611640 | AT1G22760.1 | 25.301 | 249 | 148 | 6 | 119 | 367 | 50 | 260 | 6.64e-16 | 81.3 |
Msa0611640 | AT1G22760.1 | 24.519 | 208 | 144 | 5 | 98 | 297 | 209 | 411 | 5.19e-12 | 68.9 |
Msa0611640 | AT3G13224.2 | 27.895 | 190 | 127 | 5 | 120 | 308 | 21 | 201 | 9.60e-16 | 79.3 |
Msa0611640 | AT1G60000.1 | 28.108 | 185 | 125 | 4 | 114 | 297 | 80 | 257 | 2.59e-14 | 73.6 |
Msa0611640 | AT4G26650.2 | 27.027 | 222 | 125 | 9 | 108 | 301 | 2 | 214 | 3.28e-14 | 75.1 |
Msa0611640 | AT4G26650.1 | 27.027 | 222 | 125 | 9 | 108 | 301 | 5 | 217 | 3.32e-14 | 75.1 |
Msa0611640 | AT3G04500.1 | 41.558 | 77 | 44 | 1 | 214 | 290 | 135 | 210 | 1.78e-13 | 70.9 |
Msa0611640 | AT3G16380.1 | 24.907 | 269 | 165 | 9 | 120 | 380 | 114 | 353 | 2.49e-13 | 72.8 |
Msa0611640 | AT3G16380.1 | 24.719 | 267 | 159 | 8 | 119 | 380 | 22 | 251 | 1.35e-12 | 70.5 |
Msa0611640 | AT4G13850.4 | 40.741 | 81 | 47 | 1 | 218 | 298 | 37 | 116 | 1.04e-12 | 65.5 |
Msa0611640 | AT2G37220.1 | 27.500 | 200 | 122 | 4 | 120 | 299 | 93 | 289 | 1.61e-12 | 68.6 |
Msa0611640 | AT4G13850.3 | 40.741 | 81 | 47 | 1 | 218 | 298 | 37 | 116 | 1.69e-12 | 65.5 |
Msa0611640 | AT4G13850.2 | 40.741 | 81 | 47 | 1 | 218 | 298 | 37 | 116 | 2.07e-12 | 65.5 |
Msa0611640 | AT4G13850.1 | 40.741 | 81 | 47 | 1 | 218 | 298 | 37 | 116 | 2.31e-12 | 65.5 |
Msa0611640 | AT3G13224.1 | 28.395 | 162 | 107 | 4 | 120 | 281 | 21 | 173 | 2.77e-12 | 67.0 |
Msa0611640 | AT2G33410.1 | 29.032 | 155 | 103 | 3 | 120 | 268 | 8 | 161 | 4.95e-12 | 68.2 |
Msa0611640 | AT5G55550.2 | 26.633 | 199 | 116 | 7 | 116 | 297 | 4 | 189 | 5.16e-12 | 68.6 |
Msa0611640 | AT5G55550.3 | 26.633 | 199 | 116 | 7 | 116 | 297 | 4 | 189 | 5.16e-12 | 68.6 |
Msa0611640 | AT5G55550.6 | 26.633 | 199 | 116 | 7 | 116 | 297 | 4 | 189 | 5.16e-12 | 68.6 |
Msa0611640 | AT5G55550.11 | 26.633 | 199 | 116 | 7 | 116 | 297 | 4 | 189 | 5.16e-12 | 68.6 |
Msa0611640 | AT5G55550.5 | 26.633 | 199 | 116 | 7 | 116 | 297 | 4 | 189 | 5.39e-12 | 68.2 |
Msa0611640 | AT5G55550.4 | 26.633 | 199 | 116 | 7 | 116 | 297 | 4 | 189 | 5.39e-12 | 68.2 |
Msa0611640 | AT5G55550.9 | 26.633 | 199 | 116 | 7 | 116 | 297 | 4 | 189 | 5.39e-12 | 68.2 |
Msa0611640 | AT5G55550.7 | 26.633 | 199 | 116 | 7 | 116 | 297 | 4 | 189 | 5.39e-12 | 68.2 |
Msa0611640 | AT5G55550.1 | 26.633 | 199 | 116 | 7 | 116 | 297 | 4 | 189 | 5.39e-12 | 68.2 |
Msa0611640 | AT3G07810.2 | 27.000 | 200 | 118 | 7 | 120 | 304 | 8 | 194 | 1.98e-11 | 66.6 |
Msa0611640 | AT3G07810.1 | 27.000 | 200 | 118 | 7 | 120 | 304 | 8 | 194 | 2.20e-11 | 66.6 |
Msa0611640 | AT5G40490.1 | 25.414 | 181 | 118 | 4 | 120 | 297 | 44 | 210 | 8.65e-11 | 64.3 |
Find 161 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTTAAGTGTCTGAAATTT+TGG | 0.087461 | 4_2:+59956055 | Msa0611640:three_prime_UTR |
GCTGGTGCTGGTTCTGGTTT+TGG | 0.214338 | 4_2:-59951976 | None:intergenic |
GCTATTTGCACCTCCCTATT+TGG | 0.223735 | 4_2:-59951826 | None:intergenic |
GAATGCTGAGGAAGCAATTC+AGG | 0.256444 | 4_2:+59955253 | Msa0611640:CDS |
GCTGCTGCTGGTGCTGGTTC+TGG | 0.259858 | 4_2:-59951982 | None:intergenic |
ATATTTGTAGCTGGGTTATA+TGG | 0.261838 | 4_2:+59956009 | Msa0611640:three_prime_UTR |
CGAAACGCCTGATCGGTATT+TGG | 0.263962 | 4_2:-59953232 | None:intergenic |
GGGCCCACTGTTGCTGCTGC+TGG | 0.270907 | 4_2:-59951994 | None:intergenic |
ATCAGGCGTTTCGTCTGAAT+TGG | 0.276433 | 4_2:+59953242 | Msa0611640:CDS |
CAGACTCTCTTATACCAAAT+AGG | 0.281125 | 4_2:+59951812 | Msa0611640:five_prime_UTR |
GATACTGATGTGGCTGCTGC+TGG | 0.291867 | 4_2:-59952015 | None:intergenic |
ACTGTTGCTGCTGCTGGTGC+TGG | 0.301095 | 4_2:-59951988 | None:intergenic |
ACTGGTCAATCGGAGGGATA+TGG | 0.328591 | 4_2:+59953142 | Msa0611640:CDS |
GGATATGGTGGCCATGGATA+TGG | 0.328731 | 4_2:+59955834 | Msa0611640:CDS |
AGCAGACAGTGCGTCTTTCT+TGG | 0.329108 | 4_2:+59955300 | Msa0611640:CDS |
AAACTCACATGCTTATTTCC+TGG | 0.336224 | 4_2:-59955332 | None:intergenic |
CATAACTGCTTTGCTCATAC+TGG | 0.338799 | 4_2:+59952322 | Msa0611640:CDS |
GCAGACAGTGCGTCTTTCTT+GGG | 0.339350 | 4_2:+59955301 | Msa0611640:CDS |
TTTCATTGATTCTCCCACTA+TGG | 0.347021 | 4_2:+59951901 | Msa0611640:exon |
TTGAACCTGACCATATAATA+TGG | 0.350372 | 4_2:+59956079 | Msa0611640:three_prime_UTR |
GGTTATGGAGGTCATGGATA+TGG | 0.355121 | 4_2:+59955819 | Msa0611640:CDS |
CTCTGTATTTGTGGGAGACT+TGG | 0.355245 | 4_2:+59953327 | Msa0611640:CDS |
TGTGAACTTGGTATTGAAAT+AGG | 0.359633 | 4_2:+59955943 | Msa0611640:three_prime_UTR |
CAACCCGCTGCTGCAGTTCA+AGG | 0.361560 | 4_2:+59955900 | Msa0611640:CDS |
CCCTTCAGATTGGGAACCTT+GGG | 0.361796 | 4_2:-59954673 | None:intergenic |
AGGAATGACTCTAATGGTTA+TGG | 0.376637 | 4_2:+59955804 | Msa0611640:CDS |
CAGATCGTCCTGATCTCTTC+AGG | 0.381114 | 4_2:-59952259 | None:intergenic |
ATCTGATCTCTCTGTATTTG+TGG | 0.381754 | 4_2:+59953318 | Msa0611640:CDS |
ATAACCTGAGCCATATTATA+TGG | 0.391372 | 4_2:-59956089 | None:intergenic |
AATACTACAGTTCACTTAAG+AGG | 0.394469 | 4_2:-59955980 | None:intergenic |
GGCTTGGTGACCTTCATCAT+TGG | 0.396406 | 4_2:+59952281 | Msa0611640:CDS |
ATCCGACTAAACTTGGCATT+TGG | 0.404157 | 4_2:-59956292 | None:intergenic |
TCAGGCGTTTCGTCTGAATT+GGG | 0.404528 | 4_2:+59953243 | Msa0611640:CDS |
TATCTGTTGCAGATATTTGT+TGG | 0.405468 | 4_2:+59954780 | Msa0611640:intron |
CATAGCATCAGTAACATCTA+TGG | 0.413758 | 4_2:-59953350 | None:intergenic |
ATATGCTGCTAGACAAAATC+AGG | 0.422308 | 4_2:+59955866 | Msa0611640:CDS |
CCCCTTCAGATTGGGAACCT+TGG | 0.423023 | 4_2:-59954674 | None:intergenic |
AGACTCTCTTATACCAAATA+GGG | 0.425835 | 4_2:+59951813 | Msa0611640:five_prime_UTR |
GGATTGAATGGAACAGTGAT+TGG | 0.427017 | 4_2:+59955275 | Msa0611640:CDS |
ACCTTGGGCCACAGCACCAT+TGG | 0.430193 | 4_2:-59954658 | None:intergenic |
AGCTGGCGCCTGAAGAGATC+AGG | 0.435334 | 4_2:+59952251 | Msa0611640:CDS |
CAAGTGTCGCCGCCTCCGAC+GGG | 0.435710 | 4_2:+59952172 | Msa0611640:CDS |
GTCATACGTAATAAGCAAAC+TGG | 0.435726 | 4_2:+59953124 | Msa0611640:CDS |
GTTAGAATCCCCTTCAGATT+GGG | 0.438640 | 4_2:-59954682 | None:intergenic |
GCAGCATCAGCAGAAGCAGC+TGG | 0.446100 | 4_2:+59952234 | Msa0611640:CDS |
CTTTCTTGGGGTCGCAGTCC+AGG | 0.447144 | 4_2:+59955314 | Msa0611640:CDS |
TGGCATAAGTATTCCTCAAA+TGG | 0.448491 | 4_2:+59955024 | Msa0611640:CDS |
GGCTTATGTGCAGGTTGTAT+CGG | 0.450307 | 4_2:+59953096 | Msa0611640:intron |
GTGAAAATCCCAGTCGGTAA+AGG | 0.454342 | 4_2:+59954873 | Msa0611640:CDS |
TCTAATACTGGTCGTTCAAA+AGG | 0.454872 | 4_2:+59953433 | Msa0611640:CDS |
GTTGTTATTGACTCTAATAC+TGG | 0.457060 | 4_2:+59953421 | Msa0611640:CDS |
CTGAAGAGATCAGGACGATC+TGG | 0.457665 | 4_2:+59952260 | Msa0611640:CDS |
TCTGATCTCTCTGTATTTGT+GGG | 0.467526 | 4_2:+59953319 | Msa0611640:CDS |
TGTTAGAATCCCCTTCAGAT+TGG | 0.468873 | 4_2:-59954683 | None:intergenic |
GCCCCTTGAACTGCAGCAGC+GGG | 0.471724 | 4_2:-59955903 | None:intergenic |
ACATTCAGCGCTGCTGGTGG+TGG | 0.474235 | 4_2:+59953268 | Msa0611640:CDS |
GCACCAGCAGCAGCAACAGT+GGG | 0.476631 | 4_2:+59951991 | Msa0611640:CDS |
TAAGTATTCCTCAAATGGAT+AGG | 0.479240 | 4_2:+59955029 | Msa0611640:CDS |
TTCAGCGCTGCTGGTGGTGG+TGG | 0.480349 | 4_2:+59953271 | Msa0611640:CDS |
AACCCGCTGCTGCAGTTCAA+GGG | 0.482024 | 4_2:+59955901 | Msa0611640:CDS |
GAAGCAATTCAGGGATTGAA+TGG | 0.482531 | 4_2:+59955263 | Msa0611640:CDS |
ATACTGATGTGGCTGCTGCT+GGG | 0.482857 | 4_2:-59952014 | None:intergenic |
AAGGATTCCCTATCCATTTG+AGG | 0.483337 | 4_2:-59955037 | None:intergenic |
TGGGCTACATTCAGCGCTGC+TGG | 0.483566 | 4_2:+59953262 | Msa0611640:CDS |
CTGAGCCATATTATATGGTC+AGG | 0.483879 | 4_2:-59956084 | None:intergenic |
CAGTGGAGGAATGACTCTAA+TGG | 0.486311 | 4_2:+59955798 | Msa0611640:intron |
ATGGTGTTTATTGTTCTAGC+AGG | 0.499140 | 4_2:+59953515 | Msa0611640:CDS |
CTGATTCAGATCTCCACCGT+TGG | 0.499846 | 4_2:-59951933 | None:intergenic |
TAATAAGCAAACTGGTCAAT+CGG | 0.501480 | 4_2:+59953132 | Msa0611640:CDS |
AAAGTCTTGCAGAACTTCAA+TGG | 0.502491 | 4_2:+59953199 | Msa0611640:CDS |
GTAGTGTTGGCTGGTGGCGG+TGG | 0.503654 | 4_2:+59954630 | Msa0611640:CDS |
TCTTAAACTAGCTGTAGTGT+TGG | 0.504172 | 4_2:+59954617 | Msa0611640:intron |
AAACTAGCTGTAGTGTTGGC+TGG | 0.505517 | 4_2:+59954621 | Msa0611640:intron |
TCTAATGGTTATGGAGGTCA+TGG | 0.506688 | 4_2:+59955813 | Msa0611640:CDS |
TAATGATGAGGATGAACATA+AGG | 0.511533 | 4_2:-59952124 | None:intergenic |
GCAAGTGTCGCCGCCTCCGA+CGG | 0.514870 | 4_2:+59952171 | Msa0611640:CDS |
GAGATCAGGACGATCTGGCT+TGG | 0.515806 | 4_2:+59952265 | Msa0611640:CDS |
TCCAATGGTGCTGTGGCCCA+AGG | 0.516661 | 4_2:+59954657 | Msa0611640:CDS |
TGATCCTGTGGAATCATGTA+AGG | 0.517150 | 4_2:+59955075 | Msa0611640:CDS |
AACGGTCATAGCTGTGAACT+TGG | 0.518649 | 4_2:+59955931 | Msa0611640:exon |
AAACCACATCCTTTACCGAC+TGG | 0.519643 | 4_2:-59954882 | None:intergenic |
AACTTGGTATTGAAATAGGA+TGG | 0.521082 | 4_2:+59955947 | Msa0611640:three_prime_UTR |
TATGATGCCAAATACCGATC+AGG | 0.523250 | 4_2:+59953225 | Msa0611640:CDS |
AGCCCCTTGAACTGCAGCAG+CGG | 0.525089 | 4_2:-59955904 | None:intergenic |
ACTGGTCGTTCAAAAGGCTA+TGG | 0.525221 | 4_2:+59953439 | Msa0611640:CDS |
TTCTAGCAGGCCTATGCGAG+TGG | 0.528040 | 4_2:+59953528 | Msa0611640:CDS |
AACCACATCCTTTACCGACT+GGG | 0.528514 | 4_2:-59954881 | None:intergenic |
TGGTGACCTTCATCATTGGA+TGG | 0.528713 | 4_2:+59952285 | Msa0611640:CDS |
TTGCTTATTACGTATGACCT+TGG | 0.529532 | 4_2:-59953119 | None:intergenic |
AGCTGGGTTATATGGTACCC+AGG | 0.531631 | 4_2:+59956017 | Msa0611640:three_prime_UTR |
CTGTTGCAGATATTTGTTGG+AGG | 0.534128 | 4_2:+59954783 | Msa0611640:intron |
ACCCGCTGCTGCAGTTCAAG+GGG | 0.535252 | 4_2:+59955902 | Msa0611640:CDS |
ATATATAATCTTAATAACCC+TGG | 0.536162 | 4_2:-59956035 | None:intergenic |
ATCAAGAGTTGGCATAATCA+AGG | 0.537433 | 4_2:-59955056 | None:intergenic |
AGTTCACAGCTATGACCGTT+AGG | 0.537760 | 4_2:-59955928 | None:intergenic |
GGTCATGGATATGGTGGCCA+TGG | 0.539115 | 4_2:+59955828 | Msa0611640:CDS |
ATCCATTACTTCCATATCCA+TGG | 0.539208 | 4_2:-59955845 | None:intergenic |
TGACTATGCCCCGTCGGAGG+CGG | 0.541638 | 4_2:-59952181 | None:intergenic |
CCGACGGGGCATAGTCATCA+TGG | 0.543230 | 4_2:+59952187 | Msa0611640:CDS |
AGCACCAGCAGCAGCAACAG+TGG | 0.546001 | 4_2:+59951990 | Msa0611640:CDS |
TCTCATCCATCCAATGATGA+AGG | 0.546643 | 4_2:-59952291 | None:intergenic |
ATCCCAGTCGGTAAAGGATG+TGG | 0.548381 | 4_2:+59954879 | Msa0611640:CDS |
AAGTATTCCTCAAATGGATA+GGG | 0.549717 | 4_2:+59955030 | Msa0611640:CDS |
TATATAATCTTAATAACCCT+GGG | 0.551426 | 4_2:-59956034 | None:intergenic |
CCTTGCGAAGAATATTGTTG+TGG | 0.552246 | 4_2:-59953583 | None:intergenic |
GGCCATGGATATGGAAGTAA+TGG | 0.553720 | 4_2:+59955843 | Msa0611640:CDS |
GCTGTAGTGTTGGCTGGTGG+CGG | 0.557579 | 4_2:+59954627 | Msa0611640:intron |
GCCCAAGGTTCCCAATCTGA+AGG | 0.557760 | 4_2:+59954672 | Msa0611640:CDS |
GCTGATATTGATGTTGCTGA+TGG | 0.558577 | 4_2:-59952213 | None:intergenic |
CCACAACAATATTCTTCGCA+AGG | 0.559021 | 4_2:+59953583 | Msa0611640:CDS |
AATGCTGAGGAAGCAATTCA+GGG | 0.562076 | 4_2:+59955254 | Msa0611640:CDS |
ATTCAGACGAAACGCCTGAT+CGG | 0.563201 | 4_2:-59953239 | None:intergenic |
TTGGTTTGTGCAGCCATAGT+GGG | 0.564212 | 4_2:-59951914 | None:intergenic |
GTTGGTTTGTGCAGCCATAG+TGG | 0.565748 | 4_2:-59951915 | None:intergenic |
ATCATAGCCATAGCAGTAGC+TGG | 0.566838 | 4_2:-59952064 | None:intergenic |
CTGCTTTGCTCATACTGGAG+AGG | 0.568397 | 4_2:+59952327 | Msa0611640:CDS |
ATACTACAGTTCACTTAAGA+GGG | 0.568801 | 4_2:-59955979 | None:intergenic |
TGTGGAATCATGTAAGGATG+AGG | 0.571252 | 4_2:+59955081 | Msa0611640:CDS |
CTGCTGGTGGTGGTGGCGAG+AGG | 0.574050 | 4_2:+59953278 | Msa0611640:CDS |
TGGCGAGAGGCGTTCTTCTG+AGG | 0.575371 | 4_2:+59953291 | Msa0611640:CDS |
CTGACCATATAATATGGCTC+AGG | 0.575979 | 4_2:+59956085 | Msa0611640:three_prime_UTR |
GGTGGCGGTGGACACTCCAA+TGG | 0.577143 | 4_2:+59954642 | Msa0611640:CDS |
TCTGTAACATAAAGAGCAGA+AGG | 0.578744 | 4_2:-59955228 | None:intergenic |
CGAGTTCTATACGCGAGCAA+TGG | 0.581423 | 4_2:+59953171 | Msa0611640:CDS |
TATGCCAACTCTTGATCCTG+TGG | 0.584239 | 4_2:+59955063 | Msa0611640:CDS |
CAGTTCAAGGGGCTTCCTAA+CGG | 0.591153 | 4_2:+59955913 | Msa0611640:CDS |
GTTGCAACACCCACTCGCAT+AGG | 0.591308 | 4_2:-59953538 | None:intergenic |
GACACTTGCTGTTGATGAGG+TGG | 0.591335 | 4_2:-59952157 | None:intergenic |
CCCAAGGTTCCCAATCTGAA+GGG | 0.591408 | 4_2:+59954673 | Msa0611640:CDS |
GCAGTATCCAGCTACTGCTA+TGG | 0.591918 | 4_2:+59952057 | Msa0611640:CDS |
CATTGTTGTTGATACTGATG+TGG | 0.596834 | 4_2:-59952025 | None:intergenic |
AAGCAAACTGGTCAATCGGA+GGG | 0.598971 | 4_2:+59953136 | Msa0611640:CDS |
TCATCCTTACATGATTCCAC+AGG | 0.599218 | 4_2:-59955079 | None:intergenic |
AAGTGTCGCCGCCTCCGACG+GGG | 0.600014 | 4_2:+59952173 | Msa0611640:CDS |
CAGACAGTGCGTCTTTCTTG+GGG | 0.601300 | 4_2:+59955302 | Msa0611640:CDS |
TGGACACTCCAATGGTGCTG+TGG | 0.602089 | 4_2:+59954650 | Msa0611640:CDS |
CCATGATGACTATGCCCCGT+CGG | 0.605517 | 4_2:-59952187 | None:intergenic |
GATTCCACAGGATCAAGAGT+TGG | 0.608062 | 4_2:-59955067 | None:intergenic |
TGTGCAGGTTGTATCGGCCA+AGG | 0.610498 | 4_2:+59953102 | Msa0611640:intron |
GGCGACACTTGCTGTTGATG+AGG | 0.611155 | 4_2:-59952160 | None:intergenic |
GGTTTGGTGATGAAAGTGAA+AGG | 0.613030 | 4_2:+59953470 | Msa0611640:CDS |
TAAGCAAACTGGTCAATCGG+AGG | 0.614770 | 4_2:+59953135 | Msa0611640:CDS |
CTCTCTTATACCAAATAGGG+AGG | 0.615198 | 4_2:+59951816 | Msa0611640:five_prime_UTR |
ATCTCTGTGAAAATCCCAGT+CGG | 0.624783 | 4_2:+59954867 | Msa0611640:CDS |
AATGACTCTAATGGTTATGG+AGG | 0.625005 | 4_2:+59955807 | Msa0611640:CDS |
TCTAGCAGGCCTATGCGAGT+GGG | 0.625031 | 4_2:+59953529 | Msa0611640:CDS |
AGAGCAATGACTGAAATGAA+TGG | 0.625215 | 4_2:+59953496 | Msa0611640:CDS |
GCTACATTCAGCGCTGCTGG+TGG | 0.629809 | 4_2:+59953265 | Msa0611640:CDS |
TATGGAGGTCATGGATATGG+TGG | 0.629902 | 4_2:+59955822 | Msa0611640:CDS |
CCAAGGTTCCCAATCTGAAG+GGG | 0.630101 | 4_2:+59954674 | Msa0611640:CDS |
TGATGACTATGCCCCGTCGG+AGG | 0.632739 | 4_2:-59952184 | None:intergenic |
GCTGGGTTATATGGTACCCA+GGG | 0.634219 | 4_2:+59956018 | Msa0611640:three_prime_UTR |
ACTATGGCTGCACAAACCAA+CGG | 0.639334 | 4_2:+59951917 | Msa0611640:exon |
GGCTGCTGCTGATAATGATG+AGG | 0.650096 | 4_2:-59952136 | None:intergenic |
CACATCAGTATCAACAACAA+TGG | 0.652973 | 4_2:+59952026 | Msa0611640:CDS |
ATGTTACAGAAAGAATGCTG+AGG | 0.670854 | 4_2:+59955241 | Msa0611640:CDS |
ACATAAGGCATATAATGCTG+AGG | 0.677746 | 4_2:-59952109 | None:intergenic |
CTAGCTGTAGTGTTGGCTGG+TGG | 0.692590 | 4_2:+59954624 | Msa0611640:intron |
TGACTCTGACATTAGTGACG+AGG | 0.696799 | 4_2:+59954809 | Msa0611640:CDS |
ATGGCTGCACAAACCAACGG+TGG | 0.718843 | 4_2:+59951920 | Msa0611640:CDS |
ACGGGGCATAGTCATCATGG+AGG | 0.747794 | 4_2:+59952190 | Msa0611640:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATATTTAATAAACATCTA+TGG | - | chr4_2:59954052-59954071 | None:intergenic | 10.0% |
!!! | GGAAATTTTATAAAATAATT+TGG | - | chr4_2:59955574-59955593 | None:intergenic | 10.0% |
!!! | TTTTATTTGAGATTGATTTA+AGG | + | chr4_2:59952579-59952598 | Msa0611640:intron | 15.0% |
!! | AAAGTTAAAACATTTAATCA+AGG | - | chr4_2:59952641-59952660 | None:intergenic | 15.0% |
!! | AAAGTATAACTATCTTATAT+GGG | - | chr4_2:59952796-59952815 | None:intergenic | 15.0% |
!!! | AAAAGTATAACTATCTTATA+TGG | - | chr4_2:59952797-59952816 | None:intergenic | 15.0% |
!!! | ATATAAGATAGTTATACTTT+TGG | + | chr4_2:59952796-59952815 | Msa0611640:intron | 15.0% |
!!! | AAATTTTCATTATAACTGAA+AGG | + | chr4_2:59953665-59953684 | Msa0611640:intron | 15.0% |
!!! | ATTATTTTTATATTTGTAGC+TGG | + | chr4_2:59956000-59956019 | Msa0611640:three_prime_UTR | 15.0% |
!!! | TTATTTTTATATTTGTAGCT+GGG | + | chr4_2:59956001-59956020 | Msa0611640:three_prime_UTR | 15.0% |
!! | AATTAAAAAGACAATGTTAA+TGG | + | chr4_2:59956262-59956281 | Msa0611640:three_prime_UTR | 15.0% |
!!! | TTAATTGCACTTTGAAAAAT+GGG | + | chr4_2:59952912-59952931 | Msa0611640:intron | 20.0% |
!! | AATATCCTACAATACATTAT+TGG | - | chr4_2:59952961-59952980 | None:intergenic | 20.0% |
!!! | TAGCAAATTTTCATCTATTA+AGG | + | chr4_2:59953390-59953409 | Msa0611640:CDS | 20.0% |
!!! | AGCAAATTTTCATCTATTAA+GGG | + | chr4_2:59953391-59953410 | Msa0611640:CDS | 20.0% |
!! | GTAAATATCATATTTGTTTC+TGG | + | chr4_2:59953924-59953943 | Msa0611640:intron | 20.0% |
!! | AACATTCAATAAATAGATTG+AGG | - | chr4_2:59954388-59954407 | None:intergenic | 20.0% |
!!! | TAAAAATTAATTTTTCTGCC+TGG | - | chr4_2:59954474-59954493 | None:intergenic | 20.0% |
!!! | GGCAGAAAAATTAATTTTTA+TGG | + | chr4_2:59954474-59954493 | Msa0611640:intron | 20.0% |
!! | AAAAATAAGACGATACATAT+TGG | - | chr4_2:59955177-59955196 | None:intergenic | 20.0% |
!!! | TTGTTGTTATATTTTCACTT+TGG | + | chr4_2:59955377-59955396 | Msa0611640:intron | 20.0% |
!!! | AAAAGTGAGAATTCATTTTA+GGG | - | chr4_2:59955702-59955721 | None:intergenic | 20.0% |
!!! | TAAAAGTGAGAATTCATTTT+AGG | - | chr4_2:59955703-59955722 | None:intergenic | 20.0% |
!! | ATGATATAAGATTACTTGAT+TGG | - | chr4_2:59955739-59955758 | None:intergenic | 20.0% |
!! | ACAAAGAATTAAATTAGAGA+TGG | - | chr4_2:59955771-59955790 | None:intergenic | 20.0% |
!! | TATATAATCTTAATAACCCT+GGG | - | chr4_2:59956037-59956056 | None:intergenic | 20.0% |
!! | ATATATAATCTTAATAACCC+TGG | - | chr4_2:59956038-59956057 | None:intergenic | 20.0% |
!!! | TATTTAAGTGTCTGAAATTT+TGG | + | chr4_2:59956055-59956074 | Msa0611640:three_prime_UTR | 20.0% |
! | AAATGATCTTGATTTATTGC+TGG | + | chr4_2:59952479-59952498 | Msa0611640:intron | 25.0% |
! | ATTTATTGCTGGAAGTTATT+TGG | + | chr4_2:59952490-59952509 | Msa0611640:intron | 25.0% |
! | TTTATTGCTGGAAGTTATTT+GGG | + | chr4_2:59952491-59952510 | Msa0611640:intron | 25.0% |
! | CTCAGTGATTAATTAAATCA+AGG | - | chr4_2:59952607-59952626 | None:intergenic | 25.0% |
! | CTTGATTTAATTAATCACTG+AGG | + | chr4_2:59952605-59952624 | Msa0611640:intron | 25.0% |
!! | ATCTTTTTGTGTGTGATTAT+TGG | + | chr4_2:59952696-59952715 | Msa0611640:intron | 25.0% |
! | ATTGGACTCTTTAATGAATT+AGG | + | chr4_2:59952714-59952733 | Msa0611640:intron | 25.0% |
! | TTGGACTCTTTAATGAATTA+GGG | + | chr4_2:59952715-59952734 | Msa0611640:intron | 25.0% |
!! | CTTAATTGCACTTTGAAAAA+TGG | + | chr4_2:59952911-59952930 | Msa0611640:intron | 25.0% |
!! | TAATTGCACTTTGAAAAATG+GGG | + | chr4_2:59952913-59952932 | Msa0611640:intron | 25.0% |
! | TTTGTCCAATAATGTATTGT+AGG | + | chr4_2:59952953-59952972 | Msa0611640:intron | 25.0% |
! | GACGACAATAAAAAAAAGTT+TGG | - | chr4_2:59953046-59953065 | None:intergenic | 25.0% |
!! | TTTTCATTATAACTGAAAGG+AGG | + | chr4_2:59953668-59953687 | Msa0611640:intron | 25.0% |
! | TATTAATATCAATCCAACCA+GGG | - | chr4_2:59953710-59953729 | None:intergenic | 25.0% |
! | ATATTAATATCAATCCAACC+AGG | - | chr4_2:59953711-59953730 | None:intergenic | 25.0% |
!!! | GTGCATATCTATTTTTATGT+TGG | + | chr4_2:59953760-59953779 | Msa0611640:intron | 25.0% |
! | TATGCATGAATATTTGTTTC+TGG | + | chr4_2:59954021-59954040 | Msa0611640:intron | 25.0% |
! | TTAAATCTCATATTTGTTCC+TGG | + | chr4_2:59954191-59954210 | Msa0611640:intron | 25.0% |
!! | TTCTTTTGATATCTCAGTAA+CGG | + | chr4_2:59954756-59954775 | Msa0611640:intron | 25.0% |
! | GACTTCATAATCAAAATCTA+AGG | - | chr4_2:59955680-59955699 | None:intergenic | 25.0% |
!!! | TAATTTTAGCTGTCTACTAA+TGG | - | chr4_2:59956136-59956155 | None:intergenic | 25.0% |
AGACTCTCTTATACCAAATA+GGG | + | chr4_2:59951813-59951832 | Msa0611640:five_prime_UTR | 30.0% | |
TAATGATGAGGATGAACATA+AGG | - | chr4_2:59952127-59952146 | None:intergenic | 30.0% | |
TTGACTCTTGTGATTTAAGT+TGG | + | chr4_2:59952745-59952764 | Msa0611640:intron | 30.0% | |
GTTAAAAACATTGGTCAACA+AGG | - | chr4_2:59952865-59952884 | None:intergenic | 30.0% | |
GCAAGTCTAGTTAAAAACAT+TGG | - | chr4_2:59952874-59952893 | None:intergenic | 30.0% | |
AAAGTGCAATTAAGAGATCT+AGG | - | chr4_2:59952905-59952924 | None:intergenic | 30.0% | |
TTGGTCATAAATGCGATAAT+CGG | - | chr4_2:59953027-59953046 | None:intergenic | 30.0% | |
! | TTTTATTGTCGTCTTCTGAT+TGG | + | chr4_2:59953053-59953072 | Msa0611640:intron | 30.0% |
!!! | GTTTGTTGATGTTTTTTCGT+TGG | + | chr4_2:59953075-59953094 | Msa0611640:intron | 30.0% |
TAATAAGCAAACTGGTCAAT+CGG | + | chr4_2:59953132-59953151 | Msa0611640:CDS | 30.0% | |
!! | GTTGTTATTGACTCTAATAC+TGG | + | chr4_2:59953421-59953440 | Msa0611640:CDS | 30.0% |
!!! | GGATTGCCATAAGTTTTTTT+GGG | - | chr4_2:59953565-59953584 | None:intergenic | 30.0% |
!!! | TGGATTGCCATAAGTTTTTT+TGG | - | chr4_2:59953566-59953585 | None:intergenic | 30.0% |
AACCAGGGAATTGAATTATT+AGG | - | chr4_2:59953695-59953714 | None:intergenic | 30.0% | |
TAATAATTCAATTCCCTGGT+TGG | + | chr4_2:59953694-59953713 | Msa0611640:intron | 30.0% | |
GTATGATGAATAAATCGAAG+TGG | + | chr4_2:59953804-59953823 | Msa0611640:intron | 30.0% | |
AGCACACTTACAAATAAAAC+AGG | - | chr4_2:59953830-59953849 | None:intergenic | 30.0% | |
! | TGACTTTTCAATACAAGTCT+TGG | + | chr4_2:59953872-59953891 | Msa0611640:intron | 30.0% |
GTTATGCATGAATTCAAACA+TGG | + | chr4_2:59953995-59954014 | Msa0611640:intron | 30.0% | |
TGCAAGGAAATATAACAAAG+TGG | - | chr4_2:59954289-59954308 | None:intergenic | 30.0% | |
AACAGTATACATCATGAGAT+AGG | - | chr4_2:59954333-59954352 | None:intergenic | 30.0% | |
TATCTGTTGCAGATATTTGT+TGG | + | chr4_2:59954780-59954799 | Msa0611640:intron | 30.0% | |
!! | AGACAACCATTTTTGCAATT+TGG | + | chr4_2:59954837-59954856 | Msa0611640:CDS | 30.0% |
ACATCACCAAATTGCAAAAA+TGG | - | chr4_2:59954846-59954865 | None:intergenic | 30.0% | |
ACGATCTATATCTATGCTAA+GGG | - | chr4_2:59954941-59954960 | None:intergenic | 30.0% | |
TACGATCTATATCTATGCTA+AGG | - | chr4_2:59954942-59954961 | None:intergenic | 30.0% | |
TAAGTATTCCTCAAATGGAT+AGG | + | chr4_2:59955029-59955048 | Msa0611640:CDS | 30.0% | |
AAGTATTCCTCAAATGGATA+GGG | + | chr4_2:59955030-59955049 | Msa0611640:CDS | 30.0% | |
AATCATAGCATCTTATACAG+TGG | - | chr4_2:59955135-59955154 | None:intergenic | 30.0% | |
!!! | TGTATCGTCTTATTTTTGAC+TGG | + | chr4_2:59955180-59955199 | Msa0611640:intron | 30.0% |
!!! | GTATCGTCTTATTTTTGACT+GGG | + | chr4_2:59955181-59955200 | Msa0611640:intron | 30.0% |
TTAGTACACAAACTTAGAAC+AGG | - | chr4_2:59955449-59955468 | None:intergenic | 30.0% | |
TTTAGTAGTGTAAGCAATAC+AGG | + | chr4_2:59955488-59955507 | Msa0611640:intron | 30.0% | |
! | TGTGAACTTGGTATTGAAAT+AGG | + | chr4_2:59955943-59955962 | Msa0611640:three_prime_UTR | 30.0% |
! | AACTTGGTATTGAAATAGGA+TGG | + | chr4_2:59955947-59955966 | Msa0611640:three_prime_UTR | 30.0% |
ATACTACAGTTCACTTAAGA+GGG | - | chr4_2:59955982-59956001 | None:intergenic | 30.0% | |
AATACTACAGTTCACTTAAG+AGG | - | chr4_2:59955983-59956002 | None:intergenic | 30.0% | |
ATATTTGTAGCTGGGTTATA+TGG | + | chr4_2:59956009-59956028 | Msa0611640:three_prime_UTR | 30.0% | |
TTGAACCTGACCATATAATA+TGG | + | chr4_2:59956079-59956098 | Msa0611640:three_prime_UTR | 30.0% | |
ATAACCTGAGCCATATTATA+TGG | - | chr4_2:59956092-59956111 | None:intergenic | 30.0% | |
CAGACTCTCTTATACCAAAT+AGG | + | chr4_2:59951812-59951831 | Msa0611640:five_prime_UTR | 35.0% | |
!! | TTTCATTGATTCTCCCACTA+TGG | + | chr4_2:59951901-59951920 | Msa0611640:exon | 35.0% |
!!! | TTTGGTTTTGATTCTGGTTC+TGG | - | chr4_2:59951961-59951980 | None:intergenic | 35.0% |
!!! | TCTGGTTTTGGTTTTGATTC+TGG | - | chr4_2:59951967-59951986 | None:intergenic | 35.0% |
! | CATTGTTGTTGATACTGATG+TGG | - | chr4_2:59952028-59952047 | None:intergenic | 35.0% |
CACATCAGTATCAACAACAA+TGG | + | chr4_2:59952026-59952045 | Msa0611640:CDS | 35.0% | |
ACATAAGGCATATAATGCTG+AGG | - | chr4_2:59952112-59952131 | None:intergenic | 35.0% | |
! | TGGTTTCCTTTTTCTATCCT+TGG | + | chr4_2:59952765-59952784 | Msa0611640:intron | 35.0% |
! | TATACTTTTGGTACCCTAAG+TGG | + | chr4_2:59952808-59952827 | Msa0611640:intron | 35.0% |
TTGCTTATTACGTATGACCT+TGG | - | chr4_2:59953122-59953141 | None:intergenic | 35.0% | |
GTCATACGTAATAAGCAAAC+TGG | + | chr4_2:59953124-59953143 | Msa0611640:CDS | 35.0% | |
AAAGTCTTGCAGAACTTCAA+TGG | + | chr4_2:59953199-59953218 | Msa0611640:CDS | 35.0% | |
ATCTGATCTCTCTGTATTTG+TGG | + | chr4_2:59953318-59953337 | Msa0611640:CDS | 35.0% | |
TCTGATCTCTCTGTATTTGT+GGG | + | chr4_2:59953319-59953338 | Msa0611640:CDS | 35.0% | |
CATAGCATCAGTAACATCTA+TGG | - | chr4_2:59953353-59953372 | None:intergenic | 35.0% | |
TCTAATACTGGTCGTTCAAA+AGG | + | chr4_2:59953433-59953452 | Msa0611640:CDS | 35.0% | |
!!! | CAAAAGGCTATGGTTTTGTT+AGG | + | chr4_2:59953449-59953468 | Msa0611640:CDS | 35.0% |
AGAGCAATGACTGAAATGAA+TGG | + | chr4_2:59953496-59953515 | Msa0611640:CDS | 35.0% | |
ATGGTGTTTATTGTTCTAGC+AGG | + | chr4_2:59953515-59953534 | Msa0611640:CDS | 35.0% | |
GCAACACCCAAAAAAACTTA+TGG | + | chr4_2:59953556-59953575 | Msa0611640:CDS | 35.0% | |
GTCCTAATAATTCAATTCCC+TGG | + | chr4_2:59953690-59953709 | Msa0611640:intron | 35.0% | |
AGCGCACTTACAAATAAAAC+AGG | - | chr4_2:59954100-59954119 | None:intergenic | 35.0% | |
!! | TTCCTGGCTTTATGCATTAA+CGG | + | chr4_2:59954207-59954226 | Msa0611640:intron | 35.0% |
ATACATCATGAGATAGGCAA+GGG | - | chr4_2:59954327-59954346 | None:intergenic | 35.0% | |
TATACATCATGAGATAGGCA+AGG | - | chr4_2:59954328-59954347 | None:intergenic | 35.0% | |
AGAATCTTGAATGCATAACC+AGG | + | chr4_2:59954453-59954472 | Msa0611640:intron | 35.0% | |
TATAACACGAGAGTTATCAC+CGG | + | chr4_2:59954535-59954554 | Msa0611640:intron | 35.0% | |
TACGTGATATTACTGCATTC+CGG | - | chr4_2:59954557-59954576 | None:intergenic | 35.0% | |
TCTTAAACTAGCTGTAGTGT+TGG | + | chr4_2:59954617-59954636 | Msa0611640:intron | 35.0% | |
TGGCATAAGTATTCCTCAAA+TGG | + | chr4_2:59955024-59955043 | Msa0611640:CDS | 35.0% | |
ATCAAGAGTTGGCATAATCA+AGG | - | chr4_2:59955059-59955078 | None:intergenic | 35.0% | |
TCTGTAACATAAAGAGCAGA+AGG | - | chr4_2:59955231-59955250 | None:intergenic | 35.0% | |
ATGTTACAGAAAGAATGCTG+AGG | + | chr4_2:59955241-59955260 | Msa0611640:CDS | 35.0% | |
AAACTCACATGCTTATTTCC+TGG | - | chr4_2:59955335-59955354 | None:intergenic | 35.0% | |
! | TTTTCACTTTGGCCATCTAA+TGG | + | chr4_2:59955388-59955407 | Msa0611640:intron | 35.0% |
TTTCACTTTGGCCATCTAAT+GGG | + | chr4_2:59955389-59955408 | Msa0611640:intron | 35.0% | |
! | CTCGTAATTTTCCCATTAGA+TGG | - | chr4_2:59955403-59955422 | None:intergenic | 35.0% |
! | ATGCTGAAGGTATATGAATG+CGG | - | chr4_2:59955595-59955614 | None:intergenic | 35.0% |
AGGAATGACTCTAATGGTTA+TGG | + | chr4_2:59955804-59955823 | Msa0611640:CDS | 35.0% | |
AATGACTCTAATGGTTATGG+AGG | + | chr4_2:59955807-59955826 | Msa0611640:CDS | 35.0% | |
ATCCATTACTTCCATATCCA+TGG | - | chr4_2:59955848-59955867 | None:intergenic | 35.0% | |
ATATGCTGCTAGACAAAATC+AGG | + | chr4_2:59955866-59955885 | Msa0611640:CDS | 35.0% | |
CTCTCTTATACCAAATAGGG+AGG | + | chr4_2:59951816-59951835 | Msa0611640:five_prime_UTR | 40.0% | |
GCTGATATTGATGTTGCTGA+TGG | - | chr4_2:59952216-59952235 | None:intergenic | 40.0% | |
TCTCATCCATCCAATGATGA+AGG | - | chr4_2:59952294-59952313 | None:intergenic | 40.0% | |
CATAACTGCTTTGCTCATAC+TGG | + | chr4_2:59952322-59952341 | Msa0611640:CDS | 40.0% | |
GCAATGCCAAGGATAGAAAA+AGG | - | chr4_2:59952774-59952793 | None:intergenic | 40.0% | |
ATCTTATATGGGCAATGCCA+AGG | - | chr4_2:59952785-59952804 | None:intergenic | 40.0% | |
TTTCGGCCTTCAAAACTCTA+GGG | - | chr4_2:59952836-59952855 | None:intergenic | 40.0% | |
! | TTTTCGGCCTTCAAAACTCT+AGG | - | chr4_2:59952837-59952856 | None:intergenic | 40.0% |
! | GGTCAACAAGGTCACATTTT+CGG | - | chr4_2:59952853-59952872 | None:intergenic | 40.0% |
CAATGTCTAAGCGTCAAAGT+CGG | - | chr4_2:59953004-59953023 | None:intergenic | 40.0% | |
!!! | TTTTTCGTTGGCTTATGTGC+AGG | + | chr4_2:59953087-59953106 | Msa0611640:intron | 40.0% |
TATGATGCCAAATACCGATC+AGG | + | chr4_2:59953225-59953244 | Msa0611640:CDS | 40.0% | |
!!! | GGCTATGGTTTTGTTAGGTT+TGG | + | chr4_2:59953454-59953473 | Msa0611640:CDS | 40.0% |
!! | GGTTTGGTGATGAAAGTGAA+AGG | + | chr4_2:59953470-59953489 | Msa0611640:CDS | 40.0% |
CCTTGCGAAGAATATTGTTG+TGG | - | chr4_2:59953586-59953605 | None:intergenic | 40.0% | |
CCACAACAATATTCTTCGCA+AGG | + | chr4_2:59953583-59953602 | Msa0611640:CDS | 40.0% | |
!! | AAGGTTGGTGCTGATTTAAG+TGG | - | chr4_2:59953627-59953646 | None:intergenic | 40.0% |
! | TGAAGTATCTGCAGCAGAAA+AGG | - | chr4_2:59953646-59953665 | None:intergenic | 40.0% |
GAATAGATTCAAGTGGTGCA+AGG | - | chr4_2:59954305-59954324 | None:intergenic | 40.0% | |
GTTAGAATCCCCTTCAGATT+GGG | - | chr4_2:59954685-59954704 | None:intergenic | 40.0% | |
TGTTAGAATCCCCTTCAGAT+TGG | - | chr4_2:59954686-59954705 | None:intergenic | 40.0% | |
! | CTGTTGCAGATATTTGTTGG+AGG | + | chr4_2:59954783-59954802 | Msa0611640:intron | 40.0% |
ATCTCTGTGAAAATCCCAGT+CGG | + | chr4_2:59954867-59954886 | Msa0611640:CDS | 40.0% | |
!!! | GTTTTGTTCAACTTGCTGAC+AGG | + | chr4_2:59954901-59954920 | Msa0611640:CDS | 40.0% |
GTTTCTTGCGAAATGAACAG+TGG | + | chr4_2:59955004-59955023 | Msa0611640:intron | 40.0% | |
AAGGATTCCCTATCCATTTG+AGG | - | chr4_2:59955040-59955059 | None:intergenic | 40.0% | |
TGATCCTGTGGAATCATGTA+AGG | + | chr4_2:59955075-59955094 | Msa0611640:CDS | 40.0% | |
TCATCCTTACATGATTCCAC+AGG | - | chr4_2:59955082-59955101 | None:intergenic | 40.0% | |
TGTGGAATCATGTAAGGATG+AGG | + | chr4_2:59955081-59955100 | Msa0611640:CDS | 40.0% | |
!!! | TCGTCTTATTTTTGACTGGG+TGG | + | chr4_2:59955184-59955203 | Msa0611640:intron | 40.0% |
AATGCTGAGGAAGCAATTCA+GGG | + | chr4_2:59955254-59955273 | Msa0611640:CDS | 40.0% | |
GAAGCAATTCAGGGATTGAA+TGG | + | chr4_2:59955263-59955282 | Msa0611640:CDS | 40.0% | |
GGATTGAATGGAACAGTGAT+TGG | + | chr4_2:59955275-59955294 | Msa0611640:CDS | 40.0% | |
AGCAACTAGTTACATGCTGA+AGG | - | chr4_2:59955608-59955627 | None:intergenic | 40.0% | |
AATTCTTTGTGATCTCGCAG+TGG | + | chr4_2:59955781-59955800 | Msa0611640:intron | 40.0% | |
TCTAATGGTTATGGAGGTCA+TGG | + | chr4_2:59955813-59955832 | Msa0611640:CDS | 40.0% | |
CTGAGCCATATTATATGGTC+AGG | - | chr4_2:59956087-59956106 | None:intergenic | 40.0% | |
CTGACCATATAATATGGCTC+AGG | + | chr4_2:59956085-59956104 | Msa0611640:three_prime_UTR | 40.0% | |
GCTATTTGCACCTCCCTATT+TGG | - | chr4_2:59951829-59951848 | None:intergenic | 45.0% | |
!! | TTGGTTTGTGCAGCCATAGT+GGG | - | chr4_2:59951917-59951936 | None:intergenic | 45.0% |
ACTATGGCTGCACAAACCAA+CGG | + | chr4_2:59951917-59951936 | Msa0611640:exon | 45.0% | |
ATCATAGCCATAGCAGTAGC+TGG | - | chr4_2:59952067-59952086 | None:intergenic | 45.0% | |
TGGTGACCTTCATCATTGGA+TGG | + | chr4_2:59952285-59952304 | Msa0611640:CDS | 45.0% | |
! | AAACTCTAGGGGACCACTTA+GGG | - | chr4_2:59952824-59952843 | None:intergenic | 45.0% |
! | AAAACTCTAGGGGACCACTT+AGG | - | chr4_2:59952825-59952844 | None:intergenic | 45.0% |
TTCGGCCTTCAAAACTCTAG+GGG | - | chr4_2:59952835-59952854 | None:intergenic | 45.0% | |
GGCTTATGTGCAGGTTGTAT+CGG | + | chr4_2:59953096-59953115 | Msa0611640:intron | 45.0% | |
TAAGCAAACTGGTCAATCGG+AGG | + | chr4_2:59953135-59953154 | Msa0611640:CDS | 45.0% | |
AAGCAAACTGGTCAATCGGA+GGG | + | chr4_2:59953136-59953155 | Msa0611640:CDS | 45.0% | |
ATTCAGACGAAACGCCTGAT+CGG | - | chr4_2:59953242-59953261 | None:intergenic | 45.0% | |
ATCAGGCGTTTCGTCTGAAT+TGG | + | chr4_2:59953242-59953261 | Msa0611640:CDS | 45.0% | |
TCAGGCGTTTCGTCTGAATT+GGG | + | chr4_2:59953243-59953262 | Msa0611640:CDS | 45.0% | |
CTCTGTATTTGTGGGAGACT+TGG | + | chr4_2:59953327-59953346 | Msa0611640:CDS | 45.0% | |
ACTGGTCGTTCAAAAGGCTA+TGG | + | chr4_2:59953439-59953458 | Msa0611640:CDS | 45.0% | |
GTATCTGCAGCAGAAAAGGT+TGG | - | chr4_2:59953642-59953661 | None:intergenic | 45.0% | |
GTCCGTTAATGCATAAAGCC+AGG | - | chr4_2:59954212-59954231 | None:intergenic | 45.0% | |
GGCAAGGGAATAGATTCAAG+TGG | - | chr4_2:59954312-59954331 | None:intergenic | 45.0% | |
!! | AAACTAGCTGTAGTGTTGGC+TGG | + | chr4_2:59954621-59954640 | Msa0611640:intron | 45.0% |
ACACAACTGTGAGTCTGCTT+TGG | + | chr4_2:59954706-59954725 | Msa0611640:intron | 45.0% | |
TGACTCTGACATTAGTGACG+AGG | + | chr4_2:59954809-59954828 | Msa0611640:CDS | 45.0% | |
GTGAAAATCCCAGTCGGTAA+AGG | + | chr4_2:59954873-59954892 | Msa0611640:CDS | 45.0% | |
! | AACCACATCCTTTACCGACT+GGG | - | chr4_2:59954884-59954903 | None:intergenic | 45.0% |
AAACCACATCCTTTACCGAC+TGG | - | chr4_2:59954885-59954904 | None:intergenic | 45.0% | |
TATGCCAACTCTTGATCCTG+TGG | + | chr4_2:59955063-59955082 | Msa0611640:CDS | 45.0% | |
GATTCCACAGGATCAAGAGT+TGG | - | chr4_2:59955070-59955089 | None:intergenic | 45.0% | |
GAATGCTGAGGAAGCAATTC+AGG | + | chr4_2:59955253-59955272 | Msa0611640:CDS | 45.0% | |
GTCTCGTTCTCTCTGTAATC+AGG | + | chr4_2:59955422-59955441 | Msa0611640:intron | 45.0% | |
CAGTGGAGGAATGACTCTAA+TGG | + | chr4_2:59955798-59955817 | Msa0611640:intron | 45.0% | |
GGTTATGGAGGTCATGGATA+TGG | + | chr4_2:59955819-59955838 | Msa0611640:CDS | 45.0% | |
TATGGAGGTCATGGATATGG+TGG | + | chr4_2:59955822-59955841 | Msa0611640:CDS | 45.0% | |
GGCCATGGATATGGAAGTAA+TGG | + | chr4_2:59955843-59955862 | Msa0611640:CDS | 45.0% | |
AGTTCACAGCTATGACCGTT+AGG | - | chr4_2:59955931-59955950 | None:intergenic | 45.0% | |
AACGGTCATAGCTGTGAACT+TGG | + | chr4_2:59955931-59955950 | Msa0611640:exon | 45.0% | |
!! | GTTGGTTTGTGCAGCCATAG+TGG | - | chr4_2:59951918-59951937 | None:intergenic | 50.0% |
CTGATTCAGATCTCCACCGT+TGG | - | chr4_2:59951936-59951955 | None:intergenic | 50.0% | |
ATACTGATGTGGCTGCTGCT+GGG | - | chr4_2:59952017-59952036 | None:intergenic | 50.0% | |
GCAGTATCCAGCTACTGCTA+TGG | + | chr4_2:59952057-59952076 | Msa0611640:CDS | 50.0% | |
! | GGCTGCTGCTGATAATGATG+AGG | - | chr4_2:59952139-59952158 | None:intergenic | 50.0% |
!! | GACACTTGCTGTTGATGAGG+TGG | - | chr4_2:59952160-59952179 | None:intergenic | 50.0% |
CAGATCGTCCTGATCTCTTC+AGG | - | chr4_2:59952262-59952281 | None:intergenic | 50.0% | |
CTGAAGAGATCAGGACGATC+TGG | + | chr4_2:59952260-59952279 | Msa0611640:CDS | 50.0% | |
!! | GGCTTGGTGACCTTCATCAT+TGG | + | chr4_2:59952281-59952300 | Msa0611640:CDS | 50.0% |
CTGCTTTGCTCATACTGGAG+AGG | + | chr4_2:59952327-59952346 | Msa0611640:CDS | 50.0% | |
!! | GTGGTCCCCTAGAGTTTTGA+AGG | + | chr4_2:59952827-59952846 | Msa0611640:intron | 50.0% |
ACTGGTCAATCGGAGGGATA+TGG | + | chr4_2:59953142-59953161 | Msa0611640:CDS | 50.0% | |
CGAGTTCTATACGCGAGCAA+TGG | + | chr4_2:59953171-59953190 | Msa0611640:CDS | 50.0% | |
CGAAACGCCTGATCGGTATT+TGG | - | chr4_2:59953235-59953254 | None:intergenic | 50.0% | |
CCCTTCAGATTGGGAACCTT+GGG | - | chr4_2:59954676-59954695 | None:intergenic | 50.0% | |
CCCAAGGTTCCCAATCTGAA+GGG | + | chr4_2:59954673-59954692 | Msa0611640:CDS | 50.0% | |
CCAAGGTTCCCAATCTGAAG+GGG | + | chr4_2:59954674-59954693 | Msa0611640:CDS | 50.0% | |
ATCCCAGTCGGTAAAGGATG+TGG | + | chr4_2:59954879-59954898 | Msa0611640:CDS | 50.0% | |
CTTGCTGACAGGTACACTTG+TGG | + | chr4_2:59954912-59954931 | Msa0611640:intron | 50.0% | |
AGCAGACAGTGCGTCTTTCT+TGG | + | chr4_2:59955300-59955319 | Msa0611640:CDS | 50.0% | |
GCAGACAGTGCGTCTTTCTT+GGG | + | chr4_2:59955301-59955320 | Msa0611640:CDS | 50.0% | |
CAGACAGTGCGTCTTTCTTG+GGG | + | chr4_2:59955302-59955321 | Msa0611640:CDS | 50.0% | |
TCTTTGTGATCTCGCAGTGG+AGG | + | chr4_2:59955784-59955803 | Msa0611640:intron | 50.0% | |
GGATATGGTGGCCATGGATA+TGG | + | chr4_2:59955834-59955853 | Msa0611640:CDS | 50.0% | |
CAGTTCAAGGGGCTTCCTAA+CGG | + | chr4_2:59955913-59955932 | Msa0611640:CDS | 50.0% | |
AGCTGGGTTATATGGTACCC+AGG | + | chr4_2:59956017-59956036 | Msa0611640:three_prime_UTR | 50.0% | |
GCTGGGTTATATGGTACCCA+GGG | + | chr4_2:59956018-59956037 | Msa0611640:three_prime_UTR | 50.0% | |
ATGGCTGCACAAACCAACGG+TGG | + | chr4_2:59951920-59951939 | Msa0611640:CDS | 55.0% | |
!!! | GCTGGTGCTGGTTCTGGTTT+TGG | - | chr4_2:59951979-59951998 | None:intergenic | 55.0% |
GATACTGATGTGGCTGCTGC+TGG | - | chr4_2:59952018-59952037 | None:intergenic | 55.0% | |
!! | GGCGACACTTGCTGTTGATG+AGG | - | chr4_2:59952163-59952182 | None:intergenic | 55.0% |
CCATGATGACTATGCCCCGT+CGG | - | chr4_2:59952190-59952209 | None:intergenic | 55.0% | |
ACGGGGCATAGTCATCATGG+AGG | + | chr4_2:59952190-59952209 | Msa0611640:CDS | 55.0% | |
GAGATCAGGACGATCTGGCT+TGG | + | chr4_2:59952265-59952284 | Msa0611640:CDS | 55.0% | |
! | TGTGCAGGTTGTATCGGCCA+AGG | + | chr4_2:59953102-59953121 | Msa0611640:intron | 55.0% |
TTCTAGCAGGCCTATGCGAG+TGG | + | chr4_2:59953528-59953547 | Msa0611640:CDS | 55.0% | |
TCTAGCAGGCCTATGCGAGT+GGG | + | chr4_2:59953529-59953548 | Msa0611640:CDS | 55.0% | |
GTTGCAACACCCACTCGCAT+AGG | - | chr4_2:59953541-59953560 | None:intergenic | 55.0% | |
!! | CTAGCTGTAGTGTTGGCTGG+TGG | + | chr4_2:59954624-59954643 | Msa0611640:intron | 55.0% |
! | TGGACACTCCAATGGTGCTG+TGG | + | chr4_2:59954650-59954669 | Msa0611640:CDS | 55.0% |
GCCCAAGGTTCCCAATCTGA+AGG | + | chr4_2:59954672-59954691 | Msa0611640:CDS | 55.0% | |
CCCCTTCAGATTGGGAACCT+TGG | - | chr4_2:59954677-59954696 | None:intergenic | 55.0% | |
GGTCATGGATATGGTGGCCA+TGG | + | chr4_2:59955828-59955847 | Msa0611640:CDS | 55.0% | |
AACCCGCTGCTGCAGTTCAA+GGG | + | chr4_2:59955901-59955920 | Msa0611640:CDS | 55.0% | |
ACTGTTGCTGCTGCTGGTGC+TGG | - | chr4_2:59951991-59952010 | None:intergenic | 60.0% | |
AGCACCAGCAGCAGCAACAG+TGG | + | chr4_2:59951990-59952009 | Msa0611640:CDS | 60.0% | |
GCACCAGCAGCAGCAACAGT+GGG | + | chr4_2:59951991-59952010 | Msa0611640:CDS | 60.0% | |
TGATGACTATGCCCCGTCGG+AGG | - | chr4_2:59952187-59952206 | None:intergenic | 60.0% | |
CCGACGGGGCATAGTCATCA+TGG | + | chr4_2:59952187-59952206 | Msa0611640:CDS | 60.0% | |
GCAGCATCAGCAGAAGCAGC+TGG | + | chr4_2:59952234-59952253 | Msa0611640:CDS | 60.0% | |
AGCTGGCGCCTGAAGAGATC+AGG | + | chr4_2:59952251-59952270 | Msa0611640:CDS | 60.0% | |
TGGGCTACATTCAGCGCTGC+TGG | + | chr4_2:59953262-59953281 | Msa0611640:CDS | 60.0% | |
GCTACATTCAGCGCTGCTGG+TGG | + | chr4_2:59953265-59953284 | Msa0611640:CDS | 60.0% | |
ACATTCAGCGCTGCTGGTGG+TGG | + | chr4_2:59953268-59953287 | Msa0611640:CDS | 60.0% | |
!! | TGGCGAGAGGCGTTCTTCTG+AGG | + | chr4_2:59953291-59953310 | Msa0611640:CDS | 60.0% |
!! | GCTGTAGTGTTGGCTGGTGG+CGG | + | chr4_2:59954627-59954646 | Msa0611640:intron | 60.0% |
!! | TCCAATGGTGCTGTGGCCCA+AGG | + | chr4_2:59954657-59954676 | Msa0611640:CDS | 60.0% |
ACCTTGGGCCACAGCACCAT+TGG | - | chr4_2:59954661-59954680 | None:intergenic | 60.0% | |
TTGCAACCCCCACAGCACAG+TGG | + | chr4_2:59954978-59954997 | Msa0611640:intron | 60.0% | |
TGCAACCCCCACAGCACAGT+GGG | + | chr4_2:59954979-59954998 | Msa0611640:intron | 60.0% | |
AAACCGCCCACTGTGCTGTG+GGG | - | chr4_2:59954988-59955007 | None:intergenic | 60.0% | |
GAAACCGCCCACTGTGCTGT+GGG | - | chr4_2:59954989-59955008 | None:intergenic | 60.0% | |
AGAAACCGCCCACTGTGCTG+TGG | - | chr4_2:59954990-59955009 | None:intergenic | 60.0% | |
CTTTCTTGGGGTCGCAGTCC+AGG | + | chr4_2:59955314-59955333 | Msa0611640:CDS | 60.0% | |
CAACCCGCTGCTGCAGTTCA+AGG | + | chr4_2:59955900-59955919 | Msa0611640:CDS | 60.0% | |
ACCCGCTGCTGCAGTTCAAG+GGG | + | chr4_2:59955902-59955921 | Msa0611640:CDS | 60.0% | |
AGCCCCTTGAACTGCAGCAG+CGG | - | chr4_2:59955907-59955926 | None:intergenic | 60.0% | |
!! | GCTGCTGCTGGTGCTGGTTC+TGG | - | chr4_2:59951985-59952004 | None:intergenic | 65.0% |
TGACTATGCCCCGTCGGAGG+CGG | - | chr4_2:59952184-59952203 | None:intergenic | 65.0% | |
!! | TTCAGCGCTGCTGGTGGTGG+TGG | + | chr4_2:59953271-59953290 | Msa0611640:CDS | 65.0% |
!! | GTAGTGTTGGCTGGTGGCGG+TGG | + | chr4_2:59954630-59954649 | Msa0611640:CDS | 65.0% |
! | GGTGGCGGTGGACACTCCAA+TGG | + | chr4_2:59954642-59954661 | Msa0611640:CDS | 65.0% |
AACCCCCACAGCACAGTGGG+CGG | + | chr4_2:59954982-59955001 | Msa0611640:intron | 65.0% | |
AACCGCCCACTGTGCTGTGG+GGG | - | chr4_2:59954987-59955006 | None:intergenic | 65.0% | |
GCCCCTTGAACTGCAGCAGC+GGG | - | chr4_2:59955906-59955925 | None:intergenic | 65.0% | |
GGGCCCACTGTTGCTGCTGC+TGG | - | chr4_2:59951997-59952016 | None:intergenic | 70.0% | |
! | GCAAGTGTCGCCGCCTCCGA+CGG | + | chr4_2:59952171-59952190 | Msa0611640:CDS | 70.0% |
! | CAAGTGTCGCCGCCTCCGAC+GGG | + | chr4_2:59952172-59952191 | Msa0611640:CDS | 70.0% |
! | AAGTGTCGCCGCCTCCGACG+GGG | + | chr4_2:59952173-59952192 | Msa0611640:CDS | 70.0% |
!! | CTGCTGGTGGTGGTGGCGAG+AGG | + | chr4_2:59953278-59953297 | Msa0611640:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 59951761 | 59956303 | 59951761 | ID=Msa0611640;Name=Msa0611640 |
chr4_2 | mRNA | 59951761 | 59956303 | 59951761 | ID=Msa0611640-mRNA-1;Parent=Msa0611640;Name=Msa0611640-mRNA-1;_AED=0.03;_eAED=0.03;_QI=159|0.66|0.71|0.85|1|1|7|371|503 |
chr4_2 | exon | 59951761 | 59952348 | 59951761 | ID=Msa0611640-mRNA-1:exon:15998;Parent=Msa0611640-mRNA-1 |
chr4_2 | exon | 59953109 | 59953604 | 59953109 | ID=Msa0611640-mRNA-1:exon:15999;Parent=Msa0611640-mRNA-1 |
chr4_2 | exon | 59954628 | 59954713 | 59954628 | ID=Msa0611640-mRNA-1:exon:16000;Parent=Msa0611640-mRNA-1 |
chr4_2 | exon | 59954792 | 59954922 | 59954792 | ID=Msa0611640-mRNA-1:exon:16001;Parent=Msa0611640-mRNA-1 |
chr4_2 | exon | 59955024 | 59955126 | 59955024 | ID=Msa0611640-mRNA-1:exon:16002;Parent=Msa0611640-mRNA-1 |
chr4_2 | exon | 59955212 | 59955346 | 59955212 | ID=Msa0611640-mRNA-1:exon:16003;Parent=Msa0611640-mRNA-1 |
chr4_2 | exon | 59955801 | 59956303 | 59955801 | ID=Msa0611640-mRNA-1:exon:16004;Parent=Msa0611640-mRNA-1 |
chr4_2 | five_prime_UTR | 59951761 | 59951919 | 59951761 | ID=Msa0611640-mRNA-1:five_prime_utr;Parent=Msa0611640-mRNA-1 |
chr4_2 | CDS | 59951920 | 59952348 | 59951920 | ID=Msa0611640-mRNA-1:cds;Parent=Msa0611640-mRNA-1 |
chr4_2 | CDS | 59953109 | 59953604 | 59953109 | ID=Msa0611640-mRNA-1:cds;Parent=Msa0611640-mRNA-1 |
chr4_2 | CDS | 59954628 | 59954713 | 59954628 | ID=Msa0611640-mRNA-1:cds;Parent=Msa0611640-mRNA-1 |
chr4_2 | CDS | 59954792 | 59954922 | 59954792 | ID=Msa0611640-mRNA-1:cds;Parent=Msa0611640-mRNA-1 |
chr4_2 | CDS | 59955024 | 59955126 | 59955024 | ID=Msa0611640-mRNA-1:cds;Parent=Msa0611640-mRNA-1 |
chr4_2 | CDS | 59955212 | 59955346 | 59955212 | ID=Msa0611640-mRNA-1:cds;Parent=Msa0611640-mRNA-1 |
chr4_2 | CDS | 59955801 | 59955932 | 59955801 | ID=Msa0611640-mRNA-1:cds;Parent=Msa0611640-mRNA-1 |
chr4_2 | three_prime_UTR | 59955933 | 59956303 | 59955933 | ID=Msa0611640-mRNA-1:three_prime_utr;Parent=Msa0611640-mRNA-1 |
Gene Sequence |
Protein sequence |