AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0565390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0565390 MtrunA17_Chr8g0380271 92.841 866 20 5 1 825 1 865 0.0 1597
Msa0565390 MtrunA17_Chr3g0096441 25.200 873 470 31 18 825 23 777 1.32e-27 119
Msa0565390 MtrunA17_Chr8g0343521 40.323 124 61 3 4 127 6 116 9.22e-17 85.5
Msa0565390 MtrunA17_Chr5g0429151 50.685 73 33 1 18 87 10 82 1.37e-16 84.7
Msa0565390 MtrunA17_Chr5g0446841 40.000 100 58 2 18 115 16 115 3.64e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0565390 AT1G29350.1 42.982 912 349 39 2 825 3 831 9.26e-167 504
Msa0565390 AT1G29370.1 42.623 915 348 39 2 825 3 831 1.64e-165 501
Msa0565390 AT1G29370.2 40.214 746 291 32 161 825 20 691 2.23e-123 387
Msa0565390 AT4G18150.1 34.375 896 365 39 6 818 3 758 4.11e-93 309
Msa0565390 AT5G46380.1 50.000 96 42 3 15 105 8 102 1.10e-17 88.2
Msa0565390 AT5G46380.2 50.000 96 42 3 15 105 63 157 1.11e-17 88.2
Msa0565390 AT3G13990.1 47.500 80 42 0 5 84 2 81 5.50e-16 83.2
Msa0565390 AT3G13990.2 47.500 80 42 0 5 84 2 81 5.64e-16 83.2
Msa0565390 AT3G07660.1 54.286 70 28 2 18 83 10 79 2.19e-15 81.3

Find 270 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACAAAATGCCACTGTTTC+TGG 0.131454 4_1:+66274412 Msa0565390:CDS
TGAGAATGGTAGAAATTATT+AGG 0.188167 4_1:-66277872 None:intergenic
TTGTCAAGATGCAGGCTTTA+AGG 0.189462 4_1:+66276997 Msa0565390:intron
TGCAGAAATCCCGACTATTA+TGG 0.197232 4_1:+66274599 Msa0565390:intron
TTTGTATAATACTCAGAATT+TGG 0.210938 4_1:-66273549 None:intergenic
AGTCTGAGCTTTGGAAGTTT+TGG 0.226818 4_1:+66274385 Msa0565390:CDS
ACTGCTTAGGTGGTTGGCTT+TGG 0.229453 4_1:-66277955 None:intergenic
CTGCTTAGGTGGTTGGCTTT+GGG 0.240326 4_1:-66277954 None:intergenic
GCAGGCATTGCTTGTGTAAC+AGG 0.247275 4_1:-66275625 None:intergenic
CCAGGCAAAGATTGTTGATT+AGG 0.276204 4_1:-66277050 None:intergenic
ATATTCCTTTCAGCTGAAAA+TGG 0.278424 4_1:+66274232 Msa0565390:intron
GATAATCCAGGAACTGCTTC+TGG 0.289516 4_1:+66273708 Msa0565390:CDS
GGAAGTTCCACCAGCATTCC+TGG 0.294224 4_1:+66277331 Msa0565390:CDS
TACTCCGATCCCCTCGAGTT+AGG 0.296450 4_1:-66271307 None:intergenic
GTAACAGGGAAGGGTGAGTA+TGG 0.301650 4_1:-66275610 None:intergenic
ACATACCATTATTACTGAAT+TGG 0.309599 4_1:-66272305 None:intergenic
GCTACTGATGTTTCAGCAAT+TGG 0.311438 4_1:+66274490 Msa0565390:CDS
CTCCTCCAAGTTACTTTGTA+AGG 0.312134 4_1:-66274458 None:intergenic
AATGCTGCTGCGATGGCTGC+TGG 0.323633 4_1:-66277832 None:intergenic
CCTGGTGCTGGTGTTGCCAC+TGG 0.327217 4_1:+66277068 Msa0565390:CDS
CCCGTGTTTAAGAAAGAAAA+TGG 0.342626 4_1:+66272600 Msa0565390:CDS
CCTAGGGATGCTTCCCTTGC+CGG 0.343729 4_1:+66277929 Msa0565390:CDS
GCAGAAATCCCGACTATTAT+GGG 0.344135 4_1:+66274600 Msa0565390:intron
GACTAAAACACTCTGGAGTA+TGG 0.347028 4_1:-66274366 None:intergenic
TCATCACTCTGTTGAACATT+GGG 0.349769 4_1:-66273480 None:intergenic
AGTAACTTGGAGGAGACTTC+TGG 0.354552 4_1:+66274466 Msa0565390:CDS
GAAAATGGAACGCCTGCTTA+TGG 0.359441 4_1:+66272615 Msa0565390:CDS
TGAACATTGGGTTCAATAGA+AGG 0.361624 4_1:-66273429 None:intergenic
TCGAACCAATTCAGTAATAA+TGG 0.363650 4_1:+66272300 Msa0565390:CDS
GTATGGAGTTGTAGGTGATT+TGG 0.365100 4_1:-66274349 None:intergenic
TGTCAAGATGCAGGCTTTAA+GGG 0.371015 4_1:+66276998 Msa0565390:intron
CCACTGTGGACAGAAGATTT+AGG 0.371116 4_1:-66273330 None:intergenic
AGCAACATGGCTTCTTCAAT+TGG 0.373493 4_1:+66275655 Msa0565390:CDS
TCATCACTCTGTTGAACATT+GGG 0.374072 4_1:-66273441 None:intergenic
TCATATCCAGAAGCAGTTCC+TGG 0.381408 4_1:-66273714 None:intergenic
ACATAACATAGCTATCAAAA+AGG 0.381591 4_1:+66271050 Msa0565390:five_prime_UTR
AGGTGGTTGGCTTTGGGAGC+CGG 0.383810 4_1:-66277948 None:intergenic
GTGGCATAGATCTCGTTATC+AGG 0.387328 4_1:-66271441 None:intergenic
GTTTATCTCTTTATTTATAG+AGG 0.398476 4_1:-66271010 None:intergenic
TTCTTTGCCCAATGCTCTGT+TGG 0.399402 4_1:+66275555 Msa0565390:CDS
GAACGGATAACTTATCATAT+TGG 0.402229 4_1:-66277147 None:intergenic
ACCGGCGGCGAGTCGGAAAA+TGG 0.402820 4_1:+66271386 Msa0565390:CDS
GGCAATATATCCCACATAAC+TGG 0.405437 4_1:+66274650 Msa0565390:CDS
TAAACACGGGTTTACTCTGC+TGG 0.406086 4_1:-66272587 None:intergenic
GTTGGGACTGCTTAGGTGGT+TGG 0.411643 4_1:-66277961 None:intergenic
TAAAGCCTCTGGTTGTGAAA+TGG 0.415654 4_1:-66274702 None:intergenic
GAATGAGGATATGCAACTTC+TGG 0.418587 4_1:-66274812 None:intergenic
ATATGCAACTTCTGGTTGTT+GGG 0.418891 4_1:-66274804 None:intergenic
TGGAGAAGGGAGATAGGTTC+TGG 0.424665 4_1:-66274853 None:intergenic
TAAGGATGAGCGGTAAAGTA+GGG 0.424736 4_1:+66271328 Msa0565390:exon
GGTTCAGACTTTAAAGCCTC+TGG 0.425019 4_1:-66274713 None:intergenic
CAATGCTCTGTTGGCTTCAA+CGG 0.425294 4_1:+66275564 Msa0565390:CDS
ATCATCGTTGTCGGGTATAC+CGG 0.425443 4_1:+66271368 Msa0565390:CDS
GTTGGCTTTGGGAGCCGGCA+AGG 0.425841 4_1:-66277943 None:intergenic
GCTGCTATACCATCTGGATA+TGG 0.428437 4_1:+66277305 Msa0565390:CDS
TGTGCATCCGTACTCACAGC+TGG 0.430757 4_1:+66277115 Msa0565390:CDS
GTTGTTGTTGATTCTGTCCC+TGG 0.432205 4_1:-66277787 None:intergenic
AGACGACTAACAGCTTCGTT+AGG 0.434553 4_1:-66271486 None:intergenic
ACTCCGATCCCCTCGAGTTA+GGG 0.435939 4_1:-66271306 None:intergenic
ACTCTGGAGTATGGAGTTGT+AGG 0.436906 4_1:-66274357 None:intergenic
CCGAGTCGCGGCGGCGGTGG+TGG 0.440407 4_1:+66272228 Msa0565390:CDS
TATAATACTCAGAATTTGGA+TGG 0.442532 4_1:-66273545 None:intergenic
GAAGCAGATCCAACATCAAC+AGG 0.444671 4_1:-66273660 None:intergenic
TCACCTTCGTTGTCATCAAA+AGG 0.445731 4_1:-66273783 None:intergenic
CAGTCTGCTGCTATACCATC+TGG 0.448979 4_1:+66277299 Msa0565390:CDS
TGATGGACAATAATGTAAAC+AGG 0.450601 4_1:+66272667 Msa0565390:CDS
CTGGAAGCTGTAATACGTGC+TGG 0.453247 4_1:-66277768 None:intergenic
TGAACATTGGGGTCAATAGA+AGG 0.454561 4_1:-66273468 None:intergenic
GAGAATGGTAGAAATTATTA+GGG 0.455029 4_1:-66277871 None:intergenic
AACAATCCTATGTGGGTTCA+AGG 0.455407 4_1:+66277716 Msa0565390:CDS
ATTATATCTGATGATAATCC+AGG 0.457309 4_1:+66273696 Msa0565390:CDS
AACTCGAGGGGATCGGAGTA+AGG 0.457374 4_1:+66271310 Msa0565390:five_prime_UTR
ATACCGAGTCGCGGCGGCGG+TGG 0.457632 4_1:+66272225 Msa0565390:CDS
CTACTGATGTTTCAGCAATT+GGG 0.460752 4_1:+66274491 Msa0565390:CDS
TTGGCTTTGGGAGCCGGCAA+GGG 0.466160 4_1:-66277942 None:intergenic
AATTGTTGTTGGGACTGCTT+AGG 0.468035 4_1:-66277968 None:intergenic
AACATGGCTTCTTCAATTGG+TGG 0.468306 4_1:+66275658 Msa0565390:CDS
GTCGCGGCGGCGGTGGTGGT+AGG 0.468646 4_1:+66272232 Msa0565390:CDS
GGCGGCGGTGGTGGTAGGAC+TGG 0.471364 4_1:+66272237 Msa0565390:CDS
TTCATCACTCTGTTGAACAT+TGG 0.471449 4_1:-66273442 None:intergenic
TTATACAAATACATCTAACT+TGG 0.471805 4_1:+66273563 Msa0565390:CDS
TTGCTCTTAACCTCATGAAA+AGG 0.472617 4_1:-66271616 None:intergenic
CATGCCATCGGCATTTCAGC+AGG 0.476730 4_1:+66277190 Msa0565390:CDS
CAGCACGTATTACAGCTTCC+AGG 0.479728 4_1:+66277769 Msa0565390:CDS
CAACAATCTTTGCCTGGTGC+TGG 0.482125 4_1:+66277056 Msa0565390:CDS
TATACCATCTGGATATGGTT+TGG 0.482451 4_1:+66277310 Msa0565390:CDS
CGCCACCACGGCCAGCATAT+CGG 0.484251 4_1:-66272266 None:intergenic
TTCATCACTCTGTTGAACAT+TGG 0.484635 4_1:-66273481 None:intergenic
GTTAGTCGTCTTCTTTCTCA+AGG 0.485543 4_1:+66271498 Msa0565390:CDS
CAAAAGGATGTCGATGAGAC+TGG 0.486306 4_1:-66273767 None:intergenic
GAAGCACCGCTGCCAGAGAT+TGG 0.486453 4_1:-66277238 None:intergenic
TTACACTGGAGAAGGGAGAT+AGG 0.487511 4_1:-66274859 None:intergenic
ACATCAGAATTGTCCTCCTC+TGG 0.487648 4_1:-66274319 None:intergenic
AGATTTAGGCACGGATGCCT+TGG 0.488437 4_1:-66273316 None:intergenic
GTTGAAGCCAACAGAGCATT+GGG 0.490742 4_1:-66275562 None:intergenic
CCTATGTGGGTTCAAGGGCC+TGG 0.491914 4_1:+66277722 Msa0565390:CDS
GTAAGGATGAGCGGTAAAGT+AGG 0.493616 4_1:+66271327 Msa0565390:exon
CCACCACCGCCGCCGCGACT+CGG 0.494335 4_1:-66272228 None:intergenic
GAGAAATTCCACTCTGAGAA+TGG 0.494562 4_1:-66277886 None:intergenic
CGTTGAAGCCAACAGAGCAT+TGG 0.495525 4_1:-66275563 None:intergenic
GATATGCAACTTCTGGTTGT+TGG 0.498257 4_1:-66274805 None:intergenic
TAACTTATCATATTGGCAAA+AGG 0.499903 4_1:-66277140 None:intergenic
GAGCCCAGGTCAAGTGTCAA+TGG 0.500187 4_1:+66273263 Msa0565390:CDS
TAGCACCTACCACCAATCTC+TGG 0.500268 4_1:+66277226 Msa0565390:CDS
ACATAACTGGTGTGGATGCT+AGG 0.500709 4_1:+66274663 Msa0565390:CDS
TCAGCCATTGACACTTGACC+TGG 0.501383 4_1:-66273267 None:intergenic
TGCTCATCCCCATAATAGTC+GGG 0.501814 4_1:-66274608 None:intergenic
AGGTACATCATCATCGTTGT+CGG 0.502101 4_1:+66271359 Msa0565390:CDS
TCTGCATGGTCGGCGAGCCC+AGG 0.502549 4_1:+66273249 Msa0565390:CDS
TAGCATCCACACCAGTTATG+TGG 0.502709 4_1:-66274661 None:intergenic
GGCACGGATGCCTTGGCCTG+TGG 0.503151 4_1:-66273309 None:intergenic
AATGCCACTGTTTCTGGAGC+CGG 0.504252 4_1:+66274418 Msa0565390:CDS
TAGGCCCTTACAAAGTAACT+TGG 0.504725 4_1:+66274453 Msa0565390:CDS
CCGGCAAGGGAAGCATCCCT+AGG 0.505021 4_1:-66277929 None:intergenic
TAAACAGGCAGCCACCATCT+TGG 0.509603 4_1:+66272682 Msa0565390:CDS
AAGTTGTGATGCGAGGCTGC+TGG 0.511504 4_1:-66273378 None:intergenic
TGAACCCTCTGAAACTGCTC+AGG 0.513104 4_1:+66274730 Msa0565390:CDS
TTCTGTTGCAGTGATTCTGT+TGG 0.513872 4_1:+66273180 Msa0565390:intron
CGATATGCTGGCCGTGGTGG+CGG 0.514178 4_1:+66272267 Msa0565390:CDS
TGTGAGCTTGCTTGTGAATG+AGG 0.515023 4_1:-66274827 None:intergenic
GTGGAGGAGCCTCCATAAGC+AGG 0.516664 4_1:-66272627 None:intergenic
GGTGCAAAATGCTGCTGCGA+TGG 0.517018 4_1:-66277839 None:intergenic
TGGGAACGCCTCGTATTGAT+TGG 0.517342 4_1:-66278067 None:intergenic
GATGGGTAGGCCACAGGCCA+AGG 0.517499 4_1:+66273299 Msa0565390:CDS
ACTGACATTGTTCGAGAACC+AGG 0.517878 4_1:-66277740 None:intergenic
ATAGTTTCCACCAGGAATGC+TGG 0.518703 4_1:-66277341 None:intergenic
ATCTCCCTTCTCCAGTGTAA+TGG 0.521345 4_1:+66274862 Msa0565390:CDS
TTACTGAAGCAAATAATGAA+TGG 0.524202 4_1:+66273406 Msa0565390:CDS
GACGACTAACAGCTTCGTTA+GGG 0.524337 4_1:-66271485 None:intergenic
ATGCCACTGTTTCTGGAGCC+GGG 0.524558 4_1:+66274419 Msa0565390:CDS
GAGCCGGGACACATTCATCT+AGG 0.527788 4_1:+66274434 Msa0565390:CDS
CATTACCATTACACTGGAGA+AGG 0.529209 4_1:-66274867 None:intergenic
GCCCTTACAAAGTAACTTGG+AGG 0.530352 4_1:+66274456 Msa0565390:CDS
ACTGGTAGTGACCGATATGC+TGG 0.533784 4_1:+66272255 Msa0565390:CDS
TCGGTGAACTTAACTTGTGT+CGG 0.536722 4_1:+66270897 None:intergenic
CGGGTATACCGGCGGCGAGT+CGG 0.537690 4_1:+66271379 Msa0565390:CDS
TAATTACTCCCACGTGACCT+TGG 0.540089 4_1:-66272198 None:intergenic
AACATCAGCAGCAGAACCCT+AGG 0.541212 4_1:+66277912 Msa0565390:CDS
GGTACATCATCATCGTTGTC+GGG 0.541357 4_1:+66271360 Msa0565390:CDS
TATGCTGGCCGTGGTGGCGG+TGG 0.541966 4_1:+66272270 Msa0565390:CDS
CCAGTGGCAACACCAGCACC+AGG 0.542760 4_1:-66277068 None:intergenic
GTAAACTCATGCGAAGATGA+AGG 0.543874 4_1:-66274770 None:intergenic
TCCTCCAAGTTACTTTGTAA+GGG 0.545463 4_1:-66274457 None:intergenic
ATGCTCATCCCCATAATAGT+CGG 0.545903 4_1:-66274609 None:intergenic
AAAGGTCCCAGCTGTGAGTA+CGG 0.546189 4_1:-66277122 None:intergenic
TGGCTTTGTCGAAATGCACC+TGG 0.547698 4_1:-66277812 None:intergenic
CAGCTACAAATTCATTTCCG+TGG 0.549215 4_1:-66273611 None:intergenic
CCTAATCAACAATCTTTGCC+TGG 0.549819 4_1:+66277050 Msa0565390:CDS
TGTCAAGATGGGTAGGCCAC+AGG 0.551390 4_1:+66273293 Msa0565390:CDS
AACTTGCACCACCGCCACCA+CGG 0.554060 4_1:-66272278 None:intergenic
GAACCCTAACTCGAGGGGAT+CGG 0.554891 4_1:+66271303 Msa0565390:five_prime_UTR
TTCTTCCATTTCACAACCAG+AGG 0.555873 4_1:+66274697 Msa0565390:CDS
TACTAATCCTAATCACCTCC+CGG 0.559374 4_1:+66278004 Msa0565390:exon
AACCACATACTTGGCATCTG+AGG 0.563576 4_1:-66274515 None:intergenic
AAAGATAAATACCTCCAAGA+TGG 0.563649 4_1:-66272696 None:intergenic
GTCTTATGCATCTAGTGTGA+TGG 0.563807 4_1:+66272650 Msa0565390:CDS
CATTGCTTGTGTAACAGGGA+AGG 0.569151 4_1:-66275620 None:intergenic
ACAGGCAGCCACCATCTTGG+AGG 0.569197 4_1:+66272685 Msa0565390:CDS
TGTTGTTGGGACTGCTTAGG+TGG 0.569521 4_1:-66277965 None:intergenic
TGTTGATTAGGTTGAGCTTG+AGG 0.571227 4_1:-66277038 None:intergenic
TGGAAGCTGTAATACGTGCT+GGG 0.572788 4_1:-66277767 None:intergenic
GAGTATGGGATATCCTCCCT+TGG 0.575189 4_1:-66275595 None:intergenic
GTAGAGATAAGTATTGTGAT+CGG 0.576105 4_1:+66271271 Msa0565390:five_prime_UTR
AATATACCGAGTCGCGGCGG+CGG 0.576843 4_1:+66272222 Msa0565390:CDS
AATGGCTGACATTGTCAAGA+TGG 0.577715 4_1:+66273281 Msa0565390:CDS
CTACCACCAATCTCTGGCAG+CGG 0.578357 4_1:+66277232 Msa0565390:CDS
AGCACGTATTACAGCTTCCA+GGG 0.578501 4_1:+66277770 Msa0565390:CDS
ATGTTCAACAGAGTGATGAA+TGG 0.579550 4_1:+66273445 Msa0565390:CDS
ATGTTCAACAGAGTGATGAA+TGG 0.579550 4_1:+66273484 Msa0565390:CDS
GTATAGCTCTGAGGCATGAA+CGG 0.580543 4_1:-66277164 None:intergenic
GGGCCTAGATGAATGTGTCC+CGG 0.582233 4_1:-66274437 None:intergenic
CAGGCATTGCTTGTGTAACA+GGG 0.583522 4_1:-66275624 None:intergenic
CCAGGCCCTTGAACCCACAT+AGG 0.584672 4_1:-66277722 None:intergenic
GATGAGAATCCTGTTGATGT+TGG 0.584695 4_1:+66273651 Msa0565390:CDS
AGCATCCACACCAGTTATGT+GGG 0.586141 4_1:-66274660 None:intergenic
ATGGCTGACATTGTCAAGAT+GGG 0.587015 4_1:+66273282 Msa0565390:CDS
CTGTCTTCATCATCACATCA+TGG 0.587021 4_1:+66273216 Msa0565390:CDS
AGAGATAGAAAACACGAAGA+GGG 0.588714 4_1:+66271187 Msa0565390:five_prime_UTR
ACAATCCTATGTGGGTTCAA+GGG 0.590132 4_1:+66277717 Msa0565390:CDS
CATGTTACAGTCTTTGAGAG+TGG 0.592942 4_1:-66271460 None:intergenic
TAACAGGGAAGGGTGAGTAT+GGG 0.593054 4_1:-66275609 None:intergenic
GGATGCACAGCAAGGTGTTG+AGG 0.593434 4_1:-66277101 None:intergenic
GATAAATACCTCCAAGATGG+TGG 0.593978 4_1:-66272693 None:intergenic
TATACAAATACATCTAACTT+GGG 0.595181 4_1:+66273564 Msa0565390:CDS
CATATTGCTACTACCTCAGA+TGG 0.595267 4_1:+66274629 Msa0565390:CDS
ATTGCTTGTGTAACAGGGAA+GGG 0.596414 4_1:-66275619 None:intergenic
GTGCATCCGTACTCACAGCT+GGG 0.596507 4_1:+66277116 Msa0565390:CDS
AGAATGAGAACAATCCTATG+TGG 0.598777 4_1:+66277708 Msa0565390:intron
ATCAATACGAGGCGTTCCCA+CGG 0.599819 4_1:+66278070 Msa0565390:three_prime_UTR
CATCAACAACAACTGTTGGT+GGG 0.601667 4_1:-66273521 None:intergenic
AAGCTCAGACTAAAACACTC+TGG 0.601824 4_1:-66274373 None:intergenic
CTAAATCTTCTGTCCACAGT+GGG 0.603435 4_1:+66273331 Msa0565390:CDS
GTTGGTGGGTGCTCAACAGA+AGG 0.604734 4_1:-66273507 None:intergenic
AATGGAACGCCTGCTTATGG+AGG 0.606529 4_1:+66272618 Msa0565390:CDS
GCAAGGTGTTGAGGAAGTGA+AGG 0.606894 4_1:-66277092 None:intergenic
CCTAAATCTTCTGTCCACAG+TGG 0.609597 4_1:+66273330 Msa0565390:CDS
ATAATACTCAGAATTTGGAT+GGG 0.610849 4_1:-66273544 None:intergenic
ACAACAGAACCAAGGTCACG+TGG 0.611217 4_1:+66272189 Msa0565390:CDS
TATATCCCACATAACTGGTG+TGG 0.611883 4_1:+66274655 Msa0565390:CDS
GAGCTATACCTACATGCCAT+CGG 0.612525 4_1:+66277178 Msa0565390:CDS
GCACCGCTGCCAGAGATTGG+TGG 0.613306 4_1:-66277235 None:intergenic
GAGAGATAGAAAACACGAAG+AGG 0.613579 4_1:+66271186 Msa0565390:five_prime_UTR
AGTGACCGATATGCTGGCCG+TGG 0.613894 4_1:+66272261 Msa0565390:CDS
ATATGATGATAATTTGTACA+AGG 0.614124 4_1:+66273731 Msa0565390:CDS
TGCGGCGGAACCCTAACTCG+AGG 0.614193 4_1:+66271296 Msa0565390:five_prime_UTR
AGCAGTCCCAACAACAATTG+TGG 0.614795 4_1:+66277972 Msa0565390:CDS
CGGCAAGGGAAGCATCCCTA+GGG 0.614858 4_1:-66277928 None:intergenic
AATTTACACACAGATGAGCA+AGG 0.615714 4_1:+66274289 Msa0565390:CDS
CCAATGCATTACCATTACAC+TGG 0.615927 4_1:-66274873 None:intergenic
GCGGCGGAACCCTAACTCGA+GGG 0.616023 4_1:+66271297 Msa0565390:five_prime_UTR
TGAGCAAGGGACAGAACCAG+AGG 0.616906 4_1:+66274303 Msa0565390:CDS
CTGACATTGTCAAGATGGGT+AGG 0.617049 4_1:+66273286 Msa0565390:CDS
GCATCAACAACAACTGTTGG+TGG 0.620968 4_1:-66273522 None:intergenic
AACATTCAAGTTGTGATGCG+AGG 0.621627 4_1:-66273385 None:intergenic
CAGCCATTGACACTTGACCT+GGG 0.622423 4_1:-66273266 None:intergenic
TGGGCATCAACAACAACTGT+TGG 0.624347 4_1:-66273525 None:intergenic
TTGAGGAAGTGAAGGTCCAG+TGG 0.626322 4_1:-66277084 None:intergenic
GAATGAGAACAATCCTATGT+GGG 0.626818 4_1:+66277709 Msa0565390:intron
CACACTAGATGCATAAGACG+TGG 0.629917 4_1:-66272646 None:intergenic
TGGATTGCAATCTGCATGGT+CGG 0.630287 4_1:+66273239 Msa0565390:CDS
AAAGCCTGCTGAAATGCCGA+TGG 0.631956 4_1:-66277194 None:intergenic
CGCTGCCAGAGATTGGTGGT+AGG 0.632641 4_1:-66277231 None:intergenic
TACCTCTGACATGTTTATCG+TGG 0.632657 4_1:-66275683 None:intergenic
GTGGGATATATTGCCATCTG+AGG 0.632746 4_1:-66274642 None:intergenic
GATTCTGTTGGTGTCCATGA+CGG 0.634224 4_1:+66273192 Msa0565390:CDS
CTGAAATGCCGATGGCATGT+AGG 0.634576 4_1:-66277186 None:intergenic
GACCGATATGCTGGCCGTGG+TGG 0.634825 4_1:+66272264 Msa0565390:CDS
TAAGTATTGTGATCGGAGTG+CGG 0.635793 4_1:+66271278 Msa0565390:five_prime_UTR
AGCTGAAGACAGTTCTGTTG+AGG 0.637818 4_1:+66273629 Msa0565390:CDS
TGAAAATGGTGTTTCATCAG+TGG 0.638285 4_1:+66274246 Msa0565390:CDS
AATTTCTACCATTCTCAGAG+TGG 0.639106 4_1:+66277878 Msa0565390:CDS
AAGGATGAGCGGTAAAGTAG+GGG 0.640198 4_1:+66271329 Msa0565390:exon
AACGGTTCAAACACCAAGGG+AGG 0.641331 4_1:+66275582 Msa0565390:CDS
GCAAGGGACAGAACCAGAGG+AGG 0.642696 4_1:+66274306 Msa0565390:CDS
ATGATGAAGACAGTCCGTCA+TGG 0.643081 4_1:-66273206 None:intergenic
ACTTCCAAACCATATCCAGA+TGG 0.645424 4_1:-66277314 None:intergenic
GATGGTATAGCAGCAGACTG+AGG 0.645781 4_1:-66277296 None:intergenic
CAGAATCAACAACAACAACC+AGG 0.645981 4_1:+66277794 Msa0565390:CDS
ACATCAGCAGCAGAACCCTA+GGG 0.646794 4_1:+66277913 Msa0565390:CDS
CGGCGGAACCCTAACTCGAG+GGG 0.647175 4_1:+66271298 Msa0565390:five_prime_UTR
CAGAAATCCCGACTATTATG+GGG 0.649539 4_1:+66274601 Msa0565390:intron
ATTTACACACAGATGAGCAA+GGG 0.649851 4_1:+66274290 Msa0565390:CDS
ATCGTTGTCGGGTATACCGG+CGG 0.650301 4_1:+66271371 Msa0565390:CDS
GTGAGTACGGATGCACAGCA+AGG 0.655238 4_1:-66277109 None:intergenic
CACTCTCAAAGACTGTAACA+TGG 0.656952 4_1:+66271461 Msa0565390:CDS
GTTTCCACCAGGAATGCTGG+TGG 0.657460 4_1:-66277338 None:intergenic
ATTACCATTACACTGGAGAA+GGG 0.657757 4_1:-66274866 None:intergenic
CTTCAACGGTTCAAACACCA+AGG 0.659295 4_1:+66275578 Msa0565390:CDS
CATCACTCTGTTGAACATTG+GGG 0.665234 4_1:-66273479 None:intergenic
TATAATATACCGAGTCGCGG+CGG 0.665825 4_1:+66272219 Msa0565390:CDS
AATAGACAACTGCAGAACCA+CGG 0.668240 4_1:+66273594 Msa0565390:CDS
GCCTGCAAAATATAGCAACA+TGG 0.677043 4_1:+66275642 Msa0565390:CDS
AGGATGAGCGGTAAAGTAGG+GGG 0.679432 4_1:+66271330 Msa0565390:exon
CATTCTGATGATTCCCACTG+TGG 0.681276 4_1:-66273344 None:intergenic
TTCCACGATAAACATGTCAG+AGG 0.686512 4_1:+66275681 Msa0565390:CDS
GGGATCGGAGTAAGGATGAG+CGG 0.687563 4_1:+66271318 Msa0565390:exon
AATTATAATATACCGAGTCG+CGG 0.693817 4_1:+66272216 Msa0565390:CDS
GTGGACAGAAGATTTAGGCA+CGG 0.697837 4_1:-66273325 None:intergenic
TTCAACGGTTCAAACACCAA+GGG 0.698105 4_1:+66275579 Msa0565390:CDS
ATGGTGGATTGCAATCTGCA+TGG 0.698767 4_1:+66273235 Msa0565390:CDS
TGTCCCGGCTCCAGAAACAG+TGG 0.704706 4_1:-66274422 None:intergenic
TCTTCATCATCACATCATGG+TGG 0.706000 4_1:+66273219 Msa0565390:CDS
ACTAGATGCATAAGACGTGG+AGG 0.713779 4_1:-66272643 None:intergenic
GGCATGTAGGTATAGCTCTG+AGG 0.714504 4_1:-66277173 None:intergenic
AAGCTGTAATACGTGCTGGG+AGG 0.724449 4_1:-66277764 None:intergenic
CAACAGAACCAAGGTCACGT+GGG 0.726867 4_1:+66272190 Msa0565390:CDS
GAAAATGACCAATCAATACG+AGG 0.743139 4_1:+66278059 Msa0565390:three_prime_UTR
GTAAGGATACAACAGAACCA+AGG 0.748600 4_1:+66272181 Msa0565390:CDS
GTATTGTGATCGGAGTGCGG+CGG 0.759279 4_1:+66271281 Msa0565390:five_prime_UTR
AAATTATTAGGGTACCCGTG+CGG 0.792199 4_1:-66277860 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTCTTCTTTATATT+TGG + chr4_1:66272078-66272097 Msa0565390:intron 10.0%
!!! TGTTTTTTTTTTATTTGTTT+AGG + chr4_1:66272158-66272177 Msa0565390:intron 10.0%
!!! GTTTTTTTTTTATTTGTTTA+GGG + chr4_1:66272159-66272178 Msa0565390:intron 10.0%
!! AAGTATTATGTATTATATTA+AGG - chr4_1:66275376-66275395 None:intergenic 10.0%
!! TAAAAAATTATTTGATCGAA+AGG - chr4_1:66270942-66270961 None:intergenic 15.0%
!!! TTTTATTATTATGTATTGTC+AGG + chr4_1:66271704-66271723 Msa0565390:intron 15.0%
!! TTTATTATTATGTATTGTCA+GGG + chr4_1:66271705-66271724 Msa0565390:intron 15.0%
!!! ATCATTTAAAGCAAATTTTA+TGG - chr4_1:66273848-66273867 None:intergenic 15.0%
!!! GTTTGTACATTATTATTTTA+TGG + chr4_1:66273925-66273944 Msa0565390:intron 15.0%
!! TAATTAATTATAATCAGTTC+TGG + chr4_1:66275160-66275179 Msa0565390:intron 15.0%
!! TATGTATTATATTAAGGAAA+GGG - chr4_1:66275370-66275389 None:intergenic 15.0%
!! TTATGTATTATATTAAGGAA+AGG - chr4_1:66275371-66275390 None:intergenic 15.0%
!!! TAGTTTGATTTATTACTAAA+TGG + chr4_1:66276240-66276259 Msa0565390:intron 15.0%
!!! AGTTTGATTTATTACTAAAT+GGG + chr4_1:66276241-66276260 Msa0565390:intron 15.0%
!! AATAATTAAATAGAATTACC+AGG + chr4_1:66276414-66276433 Msa0565390:intron 15.0%
!!! TGAAATGAAACTTTTTTTTA+GGG + chr4_1:66276451-66276470 Msa0565390:intron 15.0%
!!! AAAATTGGTTACTATTTTAT+AGG - chr4_1:66276649-66276668 None:intergenic 15.0%
!!! TATAAAATAGTAACCAATTT+TGG + chr4_1:66276648-66276667 Msa0565390:intron 15.0%
!!! TTATATTTTGGCTTATTATA+TGG + chr4_1:66277654-66277673 Msa0565390:intron 15.0%
!!! GAAGCAAATTTTTTTATTAC+TGG + chr4_1:66270971-66270990 Msa0565390:five_prime_UTR 20.0%
!!! GTTTATCTCTTTATTTATAG+AGG - chr4_1:66271013-66271032 None:intergenic 20.0%
!! TTATTATTATGTATTGTCAG+GGG + chr4_1:66271706-66271725 Msa0565390:intron 20.0%
!!! AAAAGTATACAAATTATGCA+AGG - chr4_1:66271785-66271804 None:intergenic 20.0%
!! TAGCCAAATAATATATTATG+GGG - chr4_1:66271819-66271838 None:intergenic 20.0%
!! GTAGCCAAATAATATATTAT+GGG - chr4_1:66271820-66271839 None:intergenic 20.0%
!! AGTAGCCAAATAATATATTA+TGG - chr4_1:66271821-66271840 None:intergenic 20.0%
!! TTTAAACCAACAAAATTGTT+TGG - chr4_1:66271844-66271863 None:intergenic 20.0%
!!! TTTTTTATTTGTTTAGGGTA+AGG + chr4_1:66272164-66272183 Msa0565390:intron 20.0%
!!! ATGATGTTTGTTTCTATTTT+TGG + chr4_1:66272341-66272360 Msa0565390:intron 20.0%
!! TATACTAAAATAACTGTACA+TGG + chr4_1:66272730-66272749 Msa0565390:intron 20.0%
!!! GAAATTAAGTTTTCAAAAAG+AGG - chr4_1:66272924-66272943 None:intergenic 20.0%
!! TTAATTCTGTGAATTAGTTA+TGG + chr4_1:66272997-66273016 Msa0565390:intron 20.0%
!! CTTTATAATACTTCTACATA+TGG - chr4_1:66273100-66273119 None:intergenic 20.0%
!! TTTGTATAATACTCAGAATT+TGG - chr4_1:66273552-66273571 None:intergenic 20.0%
!! TTATACAAATACATCTAACT+TGG + chr4_1:66273563-66273582 Msa0565390:CDS 20.0%
!! TATACAAATACATCTAACTT+GGG + chr4_1:66273564-66273583 Msa0565390:CDS 20.0%
!!! ATATGATGATAATTTGTACA+AGG + chr4_1:66273731-66273750 Msa0565390:CDS 20.0%
!! AGTGAATTTAATTCACATAA+TGG - chr4_1:66273892-66273911 None:intergenic 20.0%
!! TTCTATAACTTAGATATTTC+TGG - chr4_1:66273998-66274017 None:intergenic 20.0%
!!! GGTGATATTATTATTTCTAT+TGG + chr4_1:66274058-66274077 Msa0565390:intron 20.0%
!! TATCAAATAATAGCATTACA+TGG - chr4_1:66274154-66274173 None:intergenic 20.0%
!! GCTCTTTAATTAACTAAAAT+TGG + chr4_1:66274948-66274967 Msa0565390:intron 20.0%
!! TAAATGATATAACTAGAGTT+TGG + chr4_1:66274975-66274994 Msa0565390:intron 20.0%
!! TTTGTTAAAATTTCTTTCTC+CGG + chr4_1:66275252-66275271 Msa0565390:intron 20.0%
!! TCTAACTTATATTGCTTTAT+AGG + chr4_1:66275522-66275541 Msa0565390:intron 20.0%
!! ATATAAGTTATGATATGTTC+TGG + chr4_1:66276021-66276040 Msa0565390:intron 20.0%
!!! GTGAAATGAAACTTTTTTTT+AGG + chr4_1:66276450-66276469 Msa0565390:intron 20.0%
!!! GAAATGAAACTTTTTTTTAG+GGG + chr4_1:66276452-66276471 Msa0565390:intron 20.0%
!! TATATTGATACTTCCAAAAT+TGG - chr4_1:66276664-66276683 None:intergenic 20.0%
!!! TTTTATCCCAAATTTTGTTA+CGG + chr4_1:66276714-66276733 Msa0565390:intron 20.0%
!! AAGATTTATTAGAGTTAGTT+TGG - chr4_1:66276867-66276886 None:intergenic 20.0%
!! TCAATTATAATCATCTTTAC+TGG - chr4_1:66276892-66276911 None:intergenic 20.0%
!!! GAAATGCTATTTTTATATTG+TGG - chr4_1:66277263-66277282 None:intergenic 20.0%
!!! TCATATGACTTGTTATATTT+TGG + chr4_1:66277642-66277661 Msa0565390:intron 20.0%
! ACATAACATAGCTATCAAAA+AGG + chr4_1:66271050-66271069 Msa0565390:five_prime_UTR 25.0%
!!! AGTTACGATTGTTTCTTTTT+TGG + chr4_1:66271210-66271229 Msa0565390:five_prime_UTR 25.0%
!!! CAAGGTTTATTTTTCTTTTG+AGG - chr4_1:66271767-66271786 None:intergenic 25.0%
! CTACCCCATAATATATTATT+TGG + chr4_1:66271813-66271832 Msa0565390:intron 25.0%
! ACATACCATTATTACTGAAT+TGG - chr4_1:66272308-66272327 None:intergenic 25.0%
!!! AAGACTTTTTTACACTAAAG+TGG - chr4_1:66272416-66272435 None:intergenic 25.0%
!!! TTAATTTTTGCCGTTGTTTT+TGG + chr4_1:66272547-66272566 Msa0565390:intron 25.0%
!! TCCATTTTCTTTCTTAAACA+CGG - chr4_1:66272604-66272623 None:intergenic 25.0%
! GGATAAAAACTAAATTCTTG+TGG + chr4_1:66272760-66272779 Msa0565390:intron 25.0%
!!! ATTTTCAAGCCATATAGAAA+CGG - chr4_1:66272840-66272859 None:intergenic 25.0%
!! TTATTCTTATCTAAAACAGC+TGG + chr4_1:66272959-66272978 Msa0565390:intron 25.0%
!! AAATCAATAAATGCCCATTT+TGG + chr4_1:66273029-66273048 Msa0565390:intron 25.0%
! TTACATCTCATTTATCTTCA+GGG - chr4_1:66273057-66273076 None:intergenic 25.0%
! TTTACATCTCATTTATCTTC+AGG - chr4_1:66273058-66273077 None:intergenic 25.0%
!!! ACTAAACAGTATTGATATGA+AGG + chr4_1:66273129-66273148 Msa0565390:intron 25.0%
! TTACTGAAGCAAATAATGAA+TGG + chr4_1:66273406-66273425 Msa0565390:CDS 25.0%
! ATAATACTCAGAATTTGGAT+GGG - chr4_1:66273547-66273566 None:intergenic 25.0%
! TATAATACTCAGAATTTGGA+TGG - chr4_1:66273548-66273567 None:intergenic 25.0%
!!! TCATCAGATATAATTTTAGC+AGG - chr4_1:66273690-66273709 None:intergenic 25.0%
! ATTATATCTGATGATAATCC+AGG + chr4_1:66273696-66273715 Msa0565390:CDS 25.0%
!! AGCAAATTTTATGGAAAACA+TGG - chr4_1:66273839-66273858 None:intergenic 25.0%
!!! TTTTTAAAACCAACTACACA+TGG - chr4_1:66273956-66273975 None:intergenic 25.0%
! TAAGTTATAGAAATAGCACA+AGG + chr4_1:66274006-66274025 Msa0565390:intron 25.0%
!! TTTTAAACCATTCACACATA+CGG - chr4_1:66274111-66274130 None:intergenic 25.0%
!! CTATTTTATAACCACATACT+TGG - chr4_1:66274527-66274546 None:intergenic 25.0%
! CAAGTATGTGGTTATAAAAT+AGG + chr4_1:66274525-66274544 Msa0565390:intron 25.0%
!! TGCAACTATATATTTAAAGC+TGG + chr4_1:66274914-66274933 Msa0565390:intron 25.0%
!! CATTTTACTCTCTTAAGAAT+GGG - chr4_1:66275049-66275068 None:intergenic 25.0%
!!! TCTTTTTGATAGTAGAAAAC+TGG + chr4_1:66275090-66275109 Msa0565390:intron 25.0%
! GGTTATGTGATATATATGAT+TGG + chr4_1:66275221-66275240 Msa0565390:intron 25.0%
! TTGTTAAAATTTCTTTCTCC+GGG + chr4_1:66275253-66275272 Msa0565390:intron 25.0%
!! ATGTTTCATTCTTTTGGATT+GGG + chr4_1:66275276-66275295 Msa0565390:intron 25.0%
! TGTCCCATTACATTATATTA+TGG + chr4_1:66275397-66275416 Msa0565390:intron 25.0%
! GCACCATAATATAATGTAAT+GGG - chr4_1:66275403-66275422 None:intergenic 25.0%
! TGCACCATAATATAATGTAA+TGG - chr4_1:66275404-66275423 None:intergenic 25.0%
! TATTAACAAGCTATTGAAAG+AGG + chr4_1:66275735-66275754 Msa0565390:intron 25.0%
! TTCTTAGCCAAATAATGTTA+TGG + chr4_1:66275804-66275823 Msa0565390:intron 25.0%
! ATGAACTCCATAACATTATT+TGG - chr4_1:66275814-66275833 None:intergenic 25.0%
! CAATTGTTAACCAGAATTAT+CGG - chr4_1:66275865-66275884 None:intergenic 25.0%
! AAAAAAAGTTTCATTTCACC+TGG - chr4_1:66276449-66276468 None:intergenic 25.0%
! AGTACTGCAAAAATATAGTT+GGG - chr4_1:66276562-66276581 None:intergenic 25.0%
! TAGTACTGCAAAAATATAGT+TGG - chr4_1:66276563-66276582 None:intergenic 25.0%
!! TTTATCCCAAATTTTGTTAC+GGG + chr4_1:66276715-66276734 Msa0565390:intron 25.0%
! TACATATACACAAACAATGT+TGG - chr4_1:66276805-66276824 None:intergenic 25.0%
!!! TTTTAACCCCCTTTTTTAAA+GGG + chr4_1:66276837-66276856 Msa0565390:intron 25.0%
!!! GACATAGTTTAGTTTTAAGT+TGG + chr4_1:66276910-66276929 Msa0565390:intron 25.0%
! TAACTTATCATATTGGCAAA+AGG - chr4_1:66277143-66277162 None:intergenic 25.0%
! ATGATTGTTATCCTTATACT+GGG - chr4_1:66277428-66277447 None:intergenic 25.0%
! TATGATTGTTATCCTTATAC+TGG - chr4_1:66277429-66277448 None:intergenic 25.0%
!! TCAACTTTAATCAAGCATTT+TGG - chr4_1:66277487-66277506 None:intergenic 25.0%
!!! ATTTTGGCTTATTATATGGA+AGG + chr4_1:66277658-66277677 Msa0565390:intron 25.0%
! GAGAATGGTAGAAATTATTA+GGG - chr4_1:66277874-66277893 None:intergenic 25.0%
! TGAGAATGGTAGAAATTATT+AGG - chr4_1:66277875-66277894 None:intergenic 25.0%
! GTAGAGATAAGTATTGTGAT+CGG + chr4_1:66271271-66271290 Msa0565390:five_prime_UTR 30.0%
CAAACGAGAAAAGAAAAAAG+AGG + chr4_1:66271636-66271655 Msa0565390:CDS 30.0%
AATTATAATATACCGAGTCG+CGG + chr4_1:66272216-66272235 Msa0565390:CDS 30.0%
TCGAACCAATTCAGTAATAA+TGG + chr4_1:66272300-66272319 Msa0565390:CDS 30.0%
AATGGTATGTATTTCGAATC+TGG + chr4_1:66272318-66272337 Msa0565390:intron 30.0%
AAAGTCATCAAATCGTTTCT+TGG - chr4_1:66272497-66272516 None:intergenic 30.0%
AGTCTGATTTCCAAAAACAA+CGG - chr4_1:66272560-66272579 None:intergenic 30.0%
!!! TGTTTTTGGAAATCAGACTA+TGG + chr4_1:66272561-66272580 Msa0565390:intron 30.0%
! CCATTTTCTTTCTTAAACAC+GGG - chr4_1:66272603-66272622 None:intergenic 30.0%
! TGATGGACAATAATGTAAAC+AGG + chr4_1:66272667-66272686 Msa0565390:CDS 30.0%
AAAGATAAATACCTCCAAGA+TGG - chr4_1:66272699-66272718 None:intergenic 30.0%
CTAAAATAACTGTACATGGT+TGG + chr4_1:66272734-66272753 Msa0565390:intron 30.0%
TAAATCTAGCCGTTTCTATA+TGG + chr4_1:66272828-66272847 Msa0565390:intron 30.0%
AAAATCCGATGCTATTGAAA+AGG + chr4_1:66272855-66272874 Msa0565390:intron 30.0%
AAATCCGATGCTATTGAAAA+GGG + chr4_1:66272856-66272875 Msa0565390:intron 30.0%
!!! AACTTGCTTTTGGGATAAAT+TGG - chr4_1:66272887-66272906 None:intergenic 30.0%
AATTTATCCCAAAAGCAAGT+TGG + chr4_1:66272886-66272905 Msa0565390:intron 30.0%
TACATCTCATTTATCTTCAG+GGG - chr4_1:66273056-66273075 None:intergenic 30.0%
ATACTTCTACATATGGAAGA+GGG - chr4_1:66273093-66273112 None:intergenic 30.0%
AATACTTCTACATATGGAAG+AGG - chr4_1:66273094-66273113 None:intergenic 30.0%
ACTGCAACAGAATTGAATAA+TGG - chr4_1:66273172-66273191 None:intergenic 30.0%
TGATCATGTAATTGAAGTGA+TGG + chr4_1:66273864-66273883 Msa0565390:intron 30.0%
GTATGTGTGAATGGTTTAAA+AGG + chr4_1:66274110-66274129 Msa0565390:intron 30.0%
ATATTCCTTTCAGCTGAAAA+TGG + chr4_1:66274232-66274251 Msa0565390:intron 30.0%
! GATCCTGTTTGTTAAAAACT+AGG + chr4_1:66274999-66275018 Msa0565390:intron 30.0%
!! TGACCTAGTTTTTAACAAAC+AGG - chr4_1:66275005-66275024 None:intergenic 30.0%
! CCATTTTACTCTCTTAAGAA+TGG - chr4_1:66275050-66275069 None:intergenic 30.0%
CCATTCTTAAGAGAGTAAAA+TGG + chr4_1:66275047-66275066 Msa0565390:intron 30.0%
! GATGTTTCATTCTTTTGGAT+TGG + chr4_1:66275275-66275294 Msa0565390:intron 30.0%
GAGTTCATGTGTACATTAAA+GGG + chr4_1:66275826-66275845 Msa0565390:intron 30.0%
TATGATGCACAAATACGATA+CGG + chr4_1:66275977-66275996 Msa0565390:intron 30.0%
! GGCAAAAAGTTTTTCTTGTT+CGG + chr4_1:66276531-66276550 Msa0565390:intron 30.0%
GAATACCCGTAACAAAATTT+GGG - chr4_1:66276723-66276742 None:intergenic 30.0%
GAAATAGCAAAGTGAATCAA+AGG + chr4_1:66276743-66276762 Msa0565390:intron 30.0%
AATCAAAGGAATGTTCTTAG+AGG + chr4_1:66276757-66276776 Msa0565390:intron 30.0%
ATCAAAGGAATGTTCTTAGA+GGG + chr4_1:66276758-66276777 Msa0565390:intron 30.0%
!!! GTTTTAACCCCCTTTTTTAA+AGG + chr4_1:66276836-66276855 Msa0565390:intron 30.0%
!! AGTTGGTGTCTTGATTTTAT+TGG + chr4_1:66276927-66276946 Msa0565390:intron 30.0%
!!! TGTCTTGATTTTATTGGTTC+AGG + chr4_1:66276933-66276952 Msa0565390:intron 30.0%
!!! GTCTTGATTTTATTGGTTCA+GGG + chr4_1:66276934-66276953 Msa0565390:intron 30.0%
!!! GATTTTTTTTGTCAAGATGC+AGG + chr4_1:66276989-66277008 Msa0565390:intron 30.0%
GAACGGATAACTTATCATAT+TGG - chr4_1:66277150-66277169 None:intergenic 30.0%
! CTTTAATCAAGCATTTTGGA+AGG - chr4_1:66277483-66277502 None:intergenic 30.0%
CTTAGAGAAGAAATCAAACA+GGG - chr4_1:66277517-66277536 None:intergenic 30.0%
ACTTAGAGAAGAAATCAAAC+AGG - chr4_1:66277518-66277537 None:intergenic 30.0%
TACATTTAACATTAGACCGT+GGG - chr4_1:66278089-66278108 None:intergenic 30.0%
AGAGATAGAAAACACGAAGA+GGG + chr4_1:66271187-66271206 Msa0565390:five_prime_UTR 35.0%
AGTTAGTGATGAGAGAGAAA+GGG - chr4_1:66271535-66271554 None:intergenic 35.0%
TAGTTAGTGATGAGAGAGAA+AGG - chr4_1:66271536-66271555 None:intergenic 35.0%
TCTCTCATCACTAACTAGTT+AGG + chr4_1:66271539-66271558 Msa0565390:intron 35.0%
CTCTCATCACTAACTAGTTA+GGG + chr4_1:66271540-66271559 Msa0565390:intron 35.0%
! TCTTGTAGATCCTTTTCATG+AGG + chr4_1:66271606-66271625 Msa0565390:intron 35.0%
TTGCTCTTAACCTCATGAAA+AGG - chr4_1:66271619-66271638 None:intergenic 35.0%
! GCTACTCCAAACAATTTTGT+TGG + chr4_1:66271835-66271854 Msa0565390:intron 35.0%
! AGCTAGCACAATTTTTACGA+GGG - chr4_1:66272106-66272125 None:intergenic 35.0%
! AAGCTAGCACAATTTTTACG+AGG - chr4_1:66272107-66272126 None:intergenic 35.0%
TAACTCTTCACAATACACAG+CGG - chr4_1:66272132-66272151 None:intergenic 35.0%
CCCGTGTTTAAGAAAGAAAA+TGG + chr4_1:66272600-66272619 Msa0565390:CDS 35.0%
TCTTGTGGTTATGATGTGTT+TGG + chr4_1:66272775-66272794 Msa0565390:intron 35.0%
!!! TTGCTTTTGGGATAAATTGG+AGG - chr4_1:66272884-66272903 None:intergenic 35.0%
TATTGATATGAAGGCCAAGA+TGG + chr4_1:66273138-66273157 Msa0565390:intron 35.0%
TAATGGTGAAACATCCATCT+TGG - chr4_1:66273155-66273174 None:intergenic 35.0%
TGAACATTGGGTTCAATAGA+AGG - chr4_1:66273432-66273451 None:intergenic 35.0%
TCATCACTCTGTTGAACATT+GGG - chr4_1:66273444-66273463 None:intergenic 35.0%
TTCATCACTCTGTTGAACAT+TGG - chr4_1:66273445-66273464 None:intergenic 35.0%
ATGTTCAACAGAGTGATGAA+TGG + chr4_1:66273445-66273464 Msa0565390:CDS 35.0%
TCATCACTCTGTTGAACATT+GGG - chr4_1:66273444-66273463 None:intergenic 35.0%
TTCATCACTCTGTTGAACAT+TGG - chr4_1:66273445-66273464 None:intergenic 35.0%
ATGTTCAACAGAGTGATGAA+TGG + chr4_1:66273445-66273464 Msa0565390:CDS 35.0%
! ATCCATTTGTTGAGTCAATC+TGG + chr4_1:66274037-66274056 Msa0565390:intron 35.0%
! AAACACCATTTTCAGCTGAA+AGG - chr4_1:66274240-66274259 None:intergenic 35.0%
TGAAAATGGTGTTTCATCAG+TGG + chr4_1:66274246-66274265 Msa0565390:CDS 35.0%
AATTTACACACAGATGAGCA+AGG + chr4_1:66274289-66274308 Msa0565390:CDS 35.0%
ATTTACACACAGATGAGCAA+GGG + chr4_1:66274290-66274309 Msa0565390:CDS 35.0%
!! GAAACAGTGGCATTTTGTTT+TGG - chr4_1:66274412-66274431 None:intergenic 35.0%
AAACAAAATGCCACTGTTTC+TGG + chr4_1:66274412-66274431 Msa0565390:CDS 35.0%
! TCCTCCAAGTTACTTTGTAA+GGG - chr4_1:66274460-66274479 None:intergenic 35.0%
CTACTGATGTTTCAGCAATT+GGG + chr4_1:66274491-66274510 Msa0565390:CDS 35.0%
! ATATGCAACTTCTGGTTGTT+GGG - chr4_1:66274807-66274826 None:intergenic 35.0%
ATTACCATTACACTGGAGAA+GGG - chr4_1:66274869-66274888 None:intergenic 35.0%
!! TGCATTGGTCTGTTAGATTT+TGG + chr4_1:66274888-66274907 Msa0565390:intron 35.0%
! TTTAAAGCTGGTGTCTAGTT+TGG + chr4_1:66274926-66274945 Msa0565390:intron 35.0%
GTTAAAAACTAGGTCATCGT+TGG + chr4_1:66275009-66275028 Msa0565390:intron 35.0%
TCCAAAAGAATGAAACATCC+CGG - chr4_1:66275274-66275293 None:intergenic 35.0%
TAAGGAAAGGGTTTGTATAC+AGG - chr4_1:66275358-66275377 None:intergenic 35.0%
GGAGTTCATGTGTACATTAA+AGG + chr4_1:66275825-66275844 Msa0565390:intron 35.0%
AGAAATTTGCATTCCCTTAG+CGG - chr4_1:66275911-66275930 None:intergenic 35.0%
ACTGAGCTACACAAAATCTA+GGG - chr4_1:66275934-66275953 None:intergenic 35.0%
GTATCGTATTTGTGCATCAT+AGG - chr4_1:66275978-66275997 None:intergenic 35.0%
ATGATGCACAAATACGATAC+GGG + chr4_1:66275978-66275997 Msa0565390:intron 35.0%
AAAAGTTTCATTTCACCTGG+AGG - chr4_1:66276446-66276465 None:intergenic 35.0%
GTAGATGACTAGCATTTATC+AGG - chr4_1:66276599-66276618 None:intergenic 35.0%
ATAAATGCTAGTCATCTACG+AGG + chr4_1:66276600-66276619 Msa0565390:intron 35.0%
TAAATGCTAGTCATCTACGA+GGG + chr4_1:66276601-66276620 Msa0565390:intron 35.0%
CGAATACCCGTAACAAAATT+TGG - chr4_1:66276724-66276743 None:intergenic 35.0%
TCAAAGGAATGTTCTTAGAG+GGG + chr4_1:66276759-66276778 Msa0565390:intron 35.0%
! TTGGCGTACCCTTTAAAAAA+GGG - chr4_1:66276848-66276867 None:intergenic 35.0%
! TTTGGCGTACCCTTTAAAAA+AGG - chr4_1:66276849-66276868 None:intergenic 35.0%
!!! ATTTTATTGGTTCAGGGAGA+GGG + chr4_1:66276940-66276959 Msa0565390:intron 35.0%
TATACCATCTGGATATGGTT+TGG + chr4_1:66277310-66277329 Msa0565390:CDS 35.0%
ATCCAATGGTTGTACTAGTA+GGG - chr4_1:66277387-66277406 None:intergenic 35.0%
TATCCAATGGTTGTACTAGT+AGG - chr4_1:66277388-66277407 None:intergenic 35.0%
TATCACGTCATCATATCCAA+TGG - chr4_1:66277401-66277420 None:intergenic 35.0%
TCATATGATTTCACTTCAGC+AGG + chr4_1:66277444-66277463 Msa0565390:intron 35.0%
TTTACATTACAATGGCTGCA+TGG - chr4_1:66277568-66277587 None:intergenic 35.0%
GCCATTGTAATGTAAACAGA+CGG + chr4_1:66277572-66277591 Msa0565390:intron 35.0%
CCATTGTAATGTAAACAGAC+GGG + chr4_1:66277573-66277592 Msa0565390:intron 35.0%
AGAATGAGAACAATCCTATG+TGG + chr4_1:66277708-66277727 Msa0565390:intron 35.0%
GAATGAGAACAATCCTATGT+GGG + chr4_1:66277709-66277728 Msa0565390:intron 35.0%
AATTTCTACCATTCTCAGAG+TGG + chr4_1:66277878-66277897 Msa0565390:CDS 35.0%
!! GTTTTGCCACAATTGTTGTT+GGG - chr4_1:66277981-66278000 None:intergenic 35.0%
! TGTTTTGCCACAATTGTTGT+TGG - chr4_1:66277982-66278001 None:intergenic 35.0%
ACATCAAGACCCTTAAAAAC+CGG - chr4_1:66278026-66278045 None:intergenic 35.0%
GAAAATGACCAATCAATACG+AGG + chr4_1:66278059-66278078 Msa0565390:three_prime_UTR 35.0%
GTACATTTAACATTAGACCG+TGG - chr4_1:66278090-66278109 None:intergenic 35.0%
GAGAGATAGAAAACACGAAG+AGG + chr4_1:66271186-66271205 Msa0565390:five_prime_UTR 40.0%
! TAAGTATTGTGATCGGAGTG+CGG + chr4_1:66271278-66271297 Msa0565390:five_prime_UTR 40.0%
TAAGGATGAGCGGTAAAGTA+GGG + chr4_1:66271328-66271347 Msa0565390:exon 40.0%
AGGTACATCATCATCGTTGT+CGG + chr4_1:66271359-66271378 Msa0565390:CDS 40.0%
! CATGTTACAGTCTTTGAGAG+TGG - chr4_1:66271463-66271482 None:intergenic 40.0%
CACTCTCAAAGACTGTAACA+TGG + chr4_1:66271461-66271480 Msa0565390:CDS 40.0%
GTTAGTCGTCTTCTTTCTCA+AGG + chr4_1:66271498-66271517 Msa0565390:CDS 40.0%
! GCGAATCCTTTGATAACAGT+GGG + chr4_1:66271728-66271747 Msa0565390:intron 40.0%
! CGAATCCTTTGATAACAGTG+GGG + chr4_1:66271729-66271748 Msa0565390:intron 40.0%
! CTAGCACAATTTTTACGAGG+GGG - chr4_1:66272104-66272123 None:intergenic 40.0%
! GCTAGCACAATTTTTACGAG+GGG - chr4_1:66272105-66272124 None:intergenic 40.0%
GTAAGGATACAACAGAACCA+AGG + chr4_1:66272181-66272200 Msa0565390:CDS 40.0%
GTCTTATGCATCTAGTGTGA+TGG + chr4_1:66272650-66272669 Msa0565390:CDS 40.0%
GATAAATACCTCCAAGATGG+TGG - chr4_1:66272696-66272715 None:intergenic 40.0%
ATAACTGTACATGGTTGGAG+TGG + chr4_1:66272739-66272758 Msa0565390:intron 40.0%
! GGAACCCTTTTCAATAGCAT+CGG - chr4_1:66272863-66272882 None:intergenic 40.0%
!! TTGACAGCCAACTTGCTTTT+GGG - chr4_1:66272896-66272915 None:intergenic 40.0%
!! TTTGACAGCCAACTTGCTTT+TGG - chr4_1:66272897-66272916 None:intergenic 40.0%
TATCTTCAGGGGACCAAAAT+GGG - chr4_1:66273045-66273064 None:intergenic 40.0%
TTATCTTCAGGGGACCAAAA+TGG - chr4_1:66273046-66273065 None:intergenic 40.0%
TTCTGTTGCAGTGATTCTGT+TGG + chr4_1:66273180-66273199 Msa0565390:intron 40.0%
CTGTCTTCATCATCACATCA+TGG + chr4_1:66273216-66273235 Msa0565390:CDS 40.0%
TCTTCATCATCACATCATGG+TGG + chr4_1:66273219-66273238 Msa0565390:CDS 40.0%
AATGGCTGACATTGTCAAGA+TGG + chr4_1:66273281-66273300 Msa0565390:CDS 40.0%
ATGGCTGACATTGTCAAGAT+GGG + chr4_1:66273282-66273301 Msa0565390:CDS 40.0%
CTAAATCTTCTGTCCACAGT+GGG + chr4_1:66273331-66273350 Msa0565390:CDS 40.0%
!! AACATTCAAGTTGTGATGCG+AGG - chr4_1:66273388-66273407 None:intergenic 40.0%
TGAACATTGGGGTCAATAGA+AGG - chr4_1:66273471-66273490 None:intergenic 40.0%
CATCACTCTGTTGAACATTG+GGG - chr4_1:66273443-66273462 None:intergenic 40.0%
CATCAACAACAACTGTTGGT+GGG - chr4_1:66273524-66273543 None:intergenic 40.0%
AATAGACAACTGCAGAACCA+CGG + chr4_1:66273594-66273613 Msa0565390:CDS 40.0%
CAGCTACAAATTCATTTCCG+TGG - chr4_1:66273614-66273633 None:intergenic 40.0%
GATGAGAATCCTGTTGATGT+TGG + chr4_1:66273651-66273670 Msa0565390:CDS 40.0%
!! CATCCTTTTGATGACAACGA+AGG + chr4_1:66273780-66273799 Msa0565390:CDS 40.0%
TCACCTTCGTTGTCATCAAA+AGG - chr4_1:66273786-66273805 None:intergenic 40.0%
ATGGTTGTTCCATGTGTAGT+TGG + chr4_1:66273944-66273963 Msa0565390:intron 40.0%
! CACCAGATTGACTCAACAAA+TGG - chr4_1:66274042-66274061 None:intergenic 40.0%
TCTAACTCCGTATGTGTGAA+TGG + chr4_1:66274101-66274120 Msa0565390:intron 40.0%
ACATGTGCCTTACATACATG+TGG + chr4_1:66274186-66274205 Msa0565390:intron 40.0%
TCAGAGACCACATGTATGTA+AGG - chr4_1:66274196-66274215 None:intergenic 40.0%
GGTCTCTGAGTCTTAATTTC+TGG + chr4_1:66274207-66274226 Msa0565390:intron 40.0%
GTATGGAGTTGTAGGTGATT+TGG - chr4_1:66274352-66274371 None:intergenic 40.0%
!! GACTAAAACACTCTGGAGTA+TGG - chr4_1:66274369-66274388 None:intergenic 40.0%
AAGCTCAGACTAAAACACTC+TGG - chr4_1:66274376-66274395 None:intergenic 40.0%
!!! GAGTGTTTTAGTCTGAGCTT+TGG + chr4_1:66274376-66274395 Msa0565390:CDS 40.0%
!!! AGTCTGAGCTTTGGAAGTTT+TGG + chr4_1:66274385-66274404 Msa0565390:CDS 40.0%
TAGGCCCTTACAAAGTAACT+TGG + chr4_1:66274453-66274472 Msa0565390:CDS 40.0%
! CTCCTCCAAGTTACTTTGTA+AGG - chr4_1:66274461-66274480 None:intergenic 40.0%
GCTACTGATGTTTCAGCAAT+TGG + chr4_1:66274490-66274509 Msa0565390:CDS 40.0%
TGCAGAAATCCCGACTATTA+TGG + chr4_1:66274599-66274618 Msa0565390:intron 40.0%
GCAGAAATCCCGACTATTAT+GGG + chr4_1:66274600-66274619 Msa0565390:intron 40.0%
CAGAAATCCCGACTATTATG+GGG + chr4_1:66274601-66274620 Msa0565390:intron 40.0%
ATGCTCATCCCCATAATAGT+CGG - chr4_1:66274612-66274631 None:intergenic 40.0%
CATATTGCTACTACCTCAGA+TGG + chr4_1:66274629-66274648 Msa0565390:CDS 40.0%
GGCAATATATCCCACATAAC+TGG + chr4_1:66274650-66274669 Msa0565390:CDS 40.0%
TATATCCCACATAACTGGTG+TGG + chr4_1:66274655-66274674 Msa0565390:CDS 40.0%
TTCTTCCATTTCACAACCAG+AGG + chr4_1:66274697-66274716 Msa0565390:CDS 40.0%
TAAAGCCTCTGGTTGTGAAA+TGG - chr4_1:66274705-66274724 None:intergenic 40.0%
! TTTTCCTGAGCAGTTTCAGA+GGG - chr4_1:66274737-66274756 None:intergenic 40.0%
! ATTTTCCTGAGCAGTTTCAG+AGG - chr4_1:66274738-66274757 None:intergenic 40.0%
GTAAACTCATGCGAAGATGA+AGG - chr4_1:66274773-66274792 None:intergenic 40.0%
! GATATGCAACTTCTGGTTGT+TGG - chr4_1:66274808-66274827 None:intergenic 40.0%
GAATGAGGATATGCAACTTC+TGG - chr4_1:66274815-66274834 None:intergenic 40.0%
CATTACCATTACACTGGAGA+AGG - chr4_1:66274870-66274889 None:intergenic 40.0%
CCAATGCATTACCATTACAC+TGG - chr4_1:66274876-66274895 None:intergenic 40.0%
! CCAGTGTAATGGTAATGCAT+TGG + chr4_1:66274873-66274892 Msa0565390:intron 40.0%
CTTATTACGCGGTTTCACAT+TGG - chr4_1:66275192-66275211 None:intergenic 40.0%
TGAAACCGCGTAATAAGCTA+GGG + chr4_1:66275195-66275214 Msa0565390:intron 40.0%
! TCCGGGATGTTTCATTCTTT+TGG + chr4_1:66275270-66275289 Msa0565390:intron 40.0%
!! TTCTTTTGGATTGGGTGATG+TGG + chr4_1:66275284-66275303 Msa0565390:intron 40.0%
!! TCTTTTGGATTGGGTGATGT+GGG + chr4_1:66275285-66275304 Msa0565390:intron 40.0%
CTGTCGTGTGGTAATAACAT+AGG + chr4_1:66275434-66275453 Msa0565390:intron 40.0%
TTCAACGGTTCAAACACCAA+GGG + chr4_1:66275579-66275598 Msa0565390:CDS 40.0%
ATTGCTTGTGTAACAGGGAA+GGG - chr4_1:66275622-66275641 None:intergenic 40.0%
GCCTGCAAAATATAGCAACA+TGG + chr4_1:66275642-66275661 Msa0565390:CDS 40.0%
! GCCATGTTGCTATATTTTGC+AGG - chr4_1:66275646-66275665 None:intergenic 40.0%
AGCAACATGGCTTCTTCAAT+TGG + chr4_1:66275655-66275674 Msa0565390:CDS 40.0%
AACATGGCTTCTTCAATTGG+TGG + chr4_1:66275658-66275677 Msa0565390:CDS 40.0%
TTCCACGATAAACATGTCAG+AGG + chr4_1:66275681-66275700 Msa0565390:CDS 40.0%
TACCTCTGACATGTTTATCG+TGG - chr4_1:66275686-66275705 None:intergenic 40.0%
CACTGAGCTACACAAAATCT+AGG - chr4_1:66275935-66275954 None:intergenic 40.0%
! GATTTTGTGTAGCTCAGTGT+TGG + chr4_1:66275936-66275955 Msa0565390:intron 40.0%
TGATGCACAAATACGATACG+GGG + chr4_1:66275979-66275998 Msa0565390:intron 40.0%
GGGAAATGAAACTCGATATG+AGG + chr4_1:66276472-66276491 Msa0565390:intron 40.0%
AAATGACGAACGAAAGCTGA+AGG + chr4_1:66276495-66276514 Msa0565390:intron 40.0%
! TGGCGTACCCTTTAAAAAAG+GGG - chr4_1:66276847-66276866 None:intergenic 40.0%
!!! GATTTTATTGGTTCAGGGAG+AGG + chr4_1:66276939-66276958 Msa0565390:intron 40.0%
TTGTCAAGATGCAGGCTTTA+AGG + chr4_1:66276997-66277016 Msa0565390:intron 40.0%
! TGTCAAGATGCAGGCTTTAA+GGG + chr4_1:66276998-66277017 Msa0565390:intron 40.0%
!! TGTTGATTAGGTTGAGCTTG+AGG - chr4_1:66277041-66277060 None:intergenic 40.0%
! CCAGGCAAAGATTGTTGATT+AGG - chr4_1:66277053-66277072 None:intergenic 40.0%
CCTAATCAACAATCTTTGCC+TGG + chr4_1:66277050-66277069 Msa0565390:CDS 40.0%
ACTTCCAAACCATATCCAGA+TGG - chr4_1:66277317-66277336 None:intergenic 40.0%
TTCAAAGGATAGTTTCCACC+AGG - chr4_1:66277352-66277371 None:intergenic 40.0%
TCCAATGGTTGTACTAGTAG+GGG - chr4_1:66277386-66277405 None:intergenic 40.0%
CGTGATAAACTCCCAGTATA+AGG + chr4_1:66277414-66277433 Msa0565390:intron 40.0%
CCCGTCTGTTTACATTACAA+TGG - chr4_1:66277576-66277595 None:intergenic 40.0%
! TTTCTTTTCCTAACCACCAC+TGG - chr4_1:66277611-66277630 None:intergenic 40.0%
AACAATCCTATGTGGGTTCA+AGG + chr4_1:66277716-66277735 Msa0565390:CDS 40.0%
ACAATCCTATGTGGGTTCAA+GGG + chr4_1:66277717-66277736 Msa0565390:CDS 40.0%
CAGAATCAACAACAACAACC+AGG + chr4_1:66277794-66277813 Msa0565390:CDS 40.0%
! AAATTATTAGGGTACCCGTG+CGG - chr4_1:66277863-66277882 None:intergenic 40.0%
! GAGAAATTCCACTCTGAGAA+TGG - chr4_1:66277889-66277908 None:intergenic 40.0%
! AATTGTTGTTGGGACTGCTT+AGG - chr4_1:66277971-66277990 None:intergenic 40.0%
TACTAATCCTAATCACCTCC+CGG + chr4_1:66278004-66278023 Msa0565390:exon 40.0%
TTAAAAACCGGGAGGTGATT+AGG - chr4_1:66278014-66278033 None:intergenic 40.0%
! TAATCACCTCCCGGTTTTTA+AGG + chr4_1:66278013-66278032 Msa0565390:three_prime_UTR 40.0%
! AATCACCTCCCGGTTTTTAA+GGG + chr4_1:66278014-66278033 Msa0565390:three_prime_UTR 40.0%
CATCAAGACCCTTAAAAACC+GGG - chr4_1:66278025-66278044 None:intergenic 40.0%
CTATCTCTCTCTCTCTCTCT+CGG - chr4_1:66271175-66271194 None:intergenic 45.0%
GTAAGGATGAGCGGTAAAGT+AGG + chr4_1:66271327-66271346 Msa0565390:exon 45.0%
AAGGATGAGCGGTAAAGTAG+GGG + chr4_1:66271329-66271348 Msa0565390:exon 45.0%
GGTACATCATCATCGTTGTC+GGG + chr4_1:66271360-66271379 Msa0565390:CDS 45.0%
ATCATCGTTGTCGGGTATAC+CGG + chr4_1:66271368-66271387 Msa0565390:CDS 45.0%
GTGGCATAGATCTCGTTATC+AGG - chr4_1:66271444-66271463 None:intergenic 45.0%
GACGACTAACAGCTTCGTTA+GGG - chr4_1:66271488-66271507 None:intergenic 45.0%
AGACGACTAACAGCTTCGTT+AGG - chr4_1:66271489-66271508 None:intergenic 45.0%
! GGCGAATCCTTTGATAACAG+TGG + chr4_1:66271727-66271746 Msa0565390:intron 45.0%
TGCTACCCCACTGTTATCAA+AGG - chr4_1:66271737-66271756 None:intergenic 45.0%
TGATAACAGTGGGGTAGCAT+TGG + chr4_1:66271738-66271757 Msa0565390:intron 45.0%
TAATTACTCCCACGTGACCT+TGG - chr4_1:66272201-66272220 None:intergenic 45.0%
TATAATATACCGAGTCGCGG+CGG + chr4_1:66272219-66272238 Msa0565390:CDS 45.0%
TAAACACGGGTTTACTCTGC+TGG - chr4_1:66272590-66272609 None:intergenic 45.0%
GAAAATGGAACGCCTGCTTA+TGG + chr4_1:66272615-66272634 Msa0565390:CDS 45.0%
ACTAGATGCATAAGACGTGG+AGG - chr4_1:66272646-66272665 None:intergenic 45.0%
CACACTAGATGCATAAGACG+TGG - chr4_1:66272649-66272668 None:intergenic 45.0%
! GATTCTGTTGGTGTCCATGA+CGG + chr4_1:66273192-66273211 Msa0565390:CDS 45.0%
ATGATGAAGACAGTCCGTCA+TGG - chr4_1:66273209-66273228 None:intergenic 45.0%
!! ATGGTGGATTGCAATCTGCA+TGG + chr4_1:66273235-66273254 Msa0565390:CDS 45.0%
TGGATTGCAATCTGCATGGT+CGG + chr4_1:66273239-66273258 Msa0565390:CDS 45.0%
CTGACATTGTCAAGATGGGT+AGG + chr4_1:66273286-66273305 Msa0565390:CDS 45.0%
GTGGACAGAAGATTTAGGCA+CGG - chr4_1:66273328-66273347 None:intergenic 45.0%
CCACTGTGGACAGAAGATTT+AGG - chr4_1:66273333-66273352 None:intergenic 45.0%
CCTAAATCTTCTGTCCACAG+TGG + chr4_1:66273330-66273349 Msa0565390:CDS 45.0%
CATTCTGATGATTCCCACTG+TGG - chr4_1:66273347-66273366 None:intergenic 45.0%
GCATCAACAACAACTGTTGG+TGG - chr4_1:66273525-66273544 None:intergenic 45.0%
TGGGCATCAACAACAACTGT+TGG - chr4_1:66273528-66273547 None:intergenic 45.0%
AGCTGAAGACAGTTCTGTTG+AGG + chr4_1:66273629-66273648 Msa0565390:CDS 45.0%
GAAGCAGATCCAACATCAAC+AGG - chr4_1:66273663-66273682 None:intergenic 45.0%
GATAATCCAGGAACTGCTTC+TGG + chr4_1:66273708-66273727 Msa0565390:CDS 45.0%
TCATATCCAGAAGCAGTTCC+TGG - chr4_1:66273717-66273736 None:intergenic 45.0%
CAAAAGGATGTCGATGAGAC+TGG - chr4_1:66273770-66273789 None:intergenic 45.0%
ACATCAGAATTGTCCTCCTC+TGG - chr4_1:66274322-66274341 None:intergenic 45.0%
!! ACTCTGGAGTATGGAGTTGT+AGG - chr4_1:66274360-66274379 None:intergenic 45.0%
GCCCTTACAAAGTAACTTGG+AGG + chr4_1:66274456-66274475 Msa0565390:CDS 45.0%
AGTAACTTGGAGGAGACTTC+TGG + chr4_1:66274466-66274485 Msa0565390:CDS 45.0%
AACCACATACTTGGCATCTG+AGG - chr4_1:66274518-66274537 None:intergenic 45.0%
TGCTCATCCCCATAATAGTC+GGG - chr4_1:66274611-66274630 None:intergenic 45.0%
GTGGGATATATTGCCATCTG+AGG - chr4_1:66274645-66274664 None:intergenic 45.0%
AGCATCCACACCAGTTATGT+GGG - chr4_1:66274663-66274682 None:intergenic 45.0%
TAGCATCCACACCAGTTATG+TGG - chr4_1:66274664-66274683 None:intergenic 45.0%
ACATAACTGGTGTGGATGCT+AGG + chr4_1:66274663-66274682 Msa0565390:CDS 45.0%
!! GGTTCAGACTTTAAAGCCTC+TGG - chr4_1:66274716-66274735 None:intergenic 45.0%
! TGTGAGCTTGCTTGTGAATG+AGG - chr4_1:66274830-66274849 None:intergenic 45.0%
TTACACTGGAGAAGGGAGAT+AGG - chr4_1:66274862-66274881 None:intergenic 45.0%
ATCTCCCTTCTCCAGTGTAA+TGG + chr4_1:66274862-66274881 Msa0565390:CDS 45.0%
GTGAAACCGCGTAATAAGCT+AGG + chr4_1:66275194-66275213 Msa0565390:intron 45.0%
GAAACCGCGTAATAAGCTAG+GGG + chr4_1:66275196-66275215 Msa0565390:intron 45.0%
TTCTTTGCCCAATGCTCTGT+TGG + chr4_1:66275555-66275574 Msa0565390:CDS 45.0%
! GTTGAAGCCAACAGAGCATT+GGG - chr4_1:66275565-66275584 None:intergenic 45.0%
!! CAATGCTCTGTTGGCTTCAA+CGG + chr4_1:66275564-66275583 Msa0565390:CDS 45.0%
CTTCAACGGTTCAAACACCA+AGG + chr4_1:66275578-66275597 Msa0565390:CDS 45.0%
TAACAGGGAAGGGTGAGTAT+GGG - chr4_1:66275612-66275631 None:intergenic 45.0%
CATTGCTTGTGTAACAGGGA+AGG - chr4_1:66275623-66275642 None:intergenic 45.0%
! CAGGCATTGCTTGTGTAACA+GGG - chr4_1:66275627-66275646 None:intergenic 45.0%
CAGTTACACGCCGATAATTC+TGG + chr4_1:66275852-66275871 Msa0565390:intron 45.0%
ACGAAAGCTGAAGGATAGAG+TGG + chr4_1:66276504-66276523 Msa0565390:intron 45.0%
AAGGAATGTTCTTAGAGGGG+AGG + chr4_1:66276762-66276781 Msa0565390:intron 45.0%
TGTTCTTAGAGGGGAGGTTA+TGG + chr4_1:66276768-66276787 Msa0565390:intron 45.0%
! GGCGTACCCTTTAAAAAAGG+GGG - chr4_1:66276846-66276865 None:intergenic 45.0%
!! GTATAGCTCTGAGGCATGAA+CGG - chr4_1:66277167-66277186 None:intergenic 45.0%
GAGCTATACCTACATGCCAT+CGG + chr4_1:66277178-66277197 Msa0565390:CDS 45.0%
GCTGCTATACCATCTGGATA+TGG + chr4_1:66277305-66277324 Msa0565390:CDS 45.0%
ATAGTTTCCACCAGGAATGC+TGG - chr4_1:66277344-66277363 None:intergenic 45.0%
!! TAAACAGACGGGTTGACATG+TGG + chr4_1:66277584-66277603 Msa0565390:intron 45.0%
ACTGACATTGTTCGAGAACC+AGG - chr4_1:66277743-66277762 None:intergenic 45.0%
TGGAAGCTGTAATACGTGCT+GGG - chr4_1:66277770-66277789 None:intergenic 45.0%
AGCACGTATTACAGCTTCCA+GGG + chr4_1:66277770-66277789 Msa0565390:CDS 45.0%
!! GTTGTTGTTGATTCTGTCCC+TGG - chr4_1:66277790-66277809 None:intergenic 45.0%
AGCAGTCCCAACAACAATTG+TGG + chr4_1:66277972-66277991 Msa0565390:CDS 45.0%
!!! TATAAATAGTTTTAATATAA+CGG + chr4_1:66275764-66275783 Msa0565390:intron 5.0%
AGGATGAGCGGTAAAGTAGG+GGG + chr4_1:66271330-66271349 Msa0565390:exon 50.0%
GGTAAAGTAGGGGGACAGAA+AGG + chr4_1:66271339-66271358 Msa0565390:CDS 50.0%
ACAACAGAACCAAGGTCACG+TGG + chr4_1:66272189-66272208 Msa0565390:CDS 50.0%
CAACAGAACCAAGGTCACGT+GGG + chr4_1:66272190-66272209 Msa0565390:CDS 50.0%
! ACTGGTAGTGACCGATATGC+TGG + chr4_1:66272255-66272274 Msa0565390:CDS 50.0%
AATGGAACGCCTGCTTATGG+AGG + chr4_1:66272618-66272637 Msa0565390:CDS 50.0%
TAAACAGGCAGCCACCATCT+TGG + chr4_1:66272682-66272701 Msa0565390:CDS 50.0%
CAGCCATTGACACTTGACCT+GGG - chr4_1:66273269-66273288 None:intergenic 50.0%
TCAGCCATTGACACTTGACC+TGG - chr4_1:66273270-66273289 None:intergenic 50.0%
AGATTTAGGCACGGATGCCT+TGG - chr4_1:66273319-66273338 None:intergenic 50.0%
!! AATGCCACTGTTTCTGGAGC+CGG + chr4_1:66274418-66274437 Msa0565390:CDS 50.0%
GTCCTCAGATGCCAAGTATG+TGG + chr4_1:66274513-66274532 Msa0565390:intron 50.0%
!! TGAACCCTCTGAAACTGCTC+AGG + chr4_1:66274730-66274749 Msa0565390:CDS 50.0%
TGGAGAAGGGAGATAGGTTC+TGG - chr4_1:66274856-66274875 None:intergenic 50.0%
CCATCCCCTAGCTTATTACG+CGG - chr4_1:66275203-66275222 None:intergenic 50.0%
CAGAGATCACAACTGTCGTG+TGG + chr4_1:66275422-66275441 Msa0565390:intron 50.0%
CGTTGAAGCCAACAGAGCAT+TGG - chr4_1:66275566-66275585 None:intergenic 50.0%
AACGGTTCAAACACCAAGGG+AGG + chr4_1:66275582-66275601 Msa0565390:CDS 50.0%
GAGTATGGGATATCCTCCCT+TGG - chr4_1:66275598-66275617 None:intergenic 50.0%
GTAACAGGGAAGGGTGAGTA+TGG - chr4_1:66275613-66275632 None:intergenic 50.0%
! GCAGGCATTGCTTGTGTAAC+AGG - chr4_1:66275628-66275647 None:intergenic 50.0%
! TTGCATTCCCTTAGCGGATG+TGG - chr4_1:66275905-66275924 None:intergenic 50.0%
TACGGGGATGCGTCGTTTAT+TGG + chr4_1:66275995-66276014 Msa0565390:intron 50.0%
ATTACCAGGATAGCACCTCC+AGG + chr4_1:66276428-66276447 Msa0565390:intron 50.0%
GCTGAAGGATAGAGTGGTCT+AGG + chr4_1:66276510-66276529 Msa0565390:intron 50.0%
CAACAATCTTTGCCTGGTGC+TGG + chr4_1:66277056-66277075 Msa0565390:CDS 50.0%
TTGAGGAAGTGAAGGTCCAG+TGG - chr4_1:66277087-66277106 None:intergenic 50.0%
!! GCAAGGTGTTGAGGAAGTGA+AGG - chr4_1:66277095-66277114 None:intergenic 50.0%
AAAGGTCCCAGCTGTGAGTA+CGG - chr4_1:66277125-66277144 None:intergenic 50.0%
! GGCATGTAGGTATAGCTCTG+AGG - chr4_1:66277176-66277195 None:intergenic 50.0%
CTGAAATGCCGATGGCATGT+AGG - chr4_1:66277189-66277208 None:intergenic 50.0%
AAAGCCTGCTGAAATGCCGA+TGG - chr4_1:66277197-66277216 None:intergenic 50.0%
! GCATTTCAGCAGGCTTTTGC+TGG + chr4_1:66277200-66277219 Msa0565390:CDS 50.0%
TAGCACCTACCACCAATCTC+TGG + chr4_1:66277226-66277245 Msa0565390:CDS 50.0%
GATGGTATAGCAGCAGACTG+AGG - chr4_1:66277299-66277318 None:intergenic 50.0%
CAGTCTGCTGCTATACCATC+TGG + chr4_1:66277299-66277318 Msa0565390:CDS 50.0%
GCCCCTACTAGTACAACCAT+TGG + chr4_1:66277382-66277401 Msa0565390:intron 50.0%
AAGCTGTAATACGTGCTGGG+AGG - chr4_1:66277767-66277786 None:intergenic 50.0%
CTGGAAGCTGTAATACGTGC+TGG - chr4_1:66277771-66277790 None:intergenic 50.0%
CAGCACGTATTACAGCTTCC+AGG + chr4_1:66277769-66277788 Msa0565390:CDS 50.0%
!! TGGCTTTGTCGAAATGCACC+TGG - chr4_1:66277815-66277834 None:intergenic 50.0%
AACATCAGCAGCAGAACCCT+AGG + chr4_1:66277912-66277931 Msa0565390:CDS 50.0%
ACATCAGCAGCAGAACCCTA+GGG + chr4_1:66277913-66277932 Msa0565390:CDS 50.0%
!! CTGCTTAGGTGGTTGGCTTT+GGG - chr4_1:66277957-66277976 None:intergenic 50.0%
!! ACTGCTTAGGTGGTTGGCTT+TGG - chr4_1:66277958-66277977 None:intergenic 50.0%
TGTTGTTGGGACTGCTTAGG+TGG - chr4_1:66277968-66277987 None:intergenic 50.0%
CAAGACCCTTAAAAACCGGG+AGG - chr4_1:66278022-66278041 None:intergenic 50.0%
! TGGGAACGCCTCGTATTGAT+TGG - chr4_1:66278070-66278089 None:intergenic 50.0%
! ATCAATACGAGGCGTTCCCA+CGG + chr4_1:66278070-66278089 Msa0565390:three_prime_UTR 50.0%
GTATTGTGATCGGAGTGCGG+CGG + chr4_1:66271281-66271300 Msa0565390:five_prime_UTR 55.0%
GAACCCTAACTCGAGGGGAT+CGG + chr4_1:66271303-66271322 Msa0565390:five_prime_UTR 55.0%
ACTCCGATCCCCTCGAGTTA+GGG - chr4_1:66271309-66271328 None:intergenic 55.0%
TACTCCGATCCCCTCGAGTT+AGG - chr4_1:66271310-66271329 None:intergenic 55.0%
AACTCGAGGGGATCGGAGTA+AGG + chr4_1:66271310-66271329 Msa0565390:five_prime_UTR 55.0%
GGGATCGGAGTAAGGATGAG+CGG + chr4_1:66271318-66271337 Msa0565390:exon 55.0%
ATCGTTGTCGGGTATACCGG+CGG + chr4_1:66271371-66271390 Msa0565390:CDS 55.0%
GAGCCCAGGTCAAGTGTCAA+TGG + chr4_1:66273263-66273282 Msa0565390:CDS 55.0%
TGTCAAGATGGGTAGGCCAC+AGG + chr4_1:66273293-66273312 Msa0565390:CDS 55.0%
AAGTTGTGATGCGAGGCTGC+TGG - chr4_1:66273381-66273400 None:intergenic 55.0%
! GTTGGTGGGTGCTCAACAGA+AGG - chr4_1:66273510-66273529 None:intergenic 55.0%
TGAGCAAGGGACAGAACCAG+AGG + chr4_1:66274303-66274322 Msa0565390:CDS 55.0%
!! ATGCCACTGTTTCTGGAGCC+GGG + chr4_1:66274419-66274438 Msa0565390:CDS 55.0%
GAGCCGGGACACATTCATCT+AGG + chr4_1:66274434-66274453 Msa0565390:CDS 55.0%
GGGCCTAGATGAATGTGTCC+CGG - chr4_1:66274440-66274459 None:intergenic 55.0%
CCGCGTAATAAGCTAGGGGA+TGG + chr4_1:66275200-66275219 Msa0565390:intron 55.0%
!! TTCACCTGGAGGTGCTATCC+TGG - chr4_1:66276435-66276454 None:intergenic 55.0%
!! GGATGCACAGCAAGGTGTTG+AGG - chr4_1:66277104-66277123 None:intergenic 55.0%
GTGAGTACGGATGCACAGCA+AGG - chr4_1:66277112-66277131 None:intergenic 55.0%
TGTGCATCCGTACTCACAGC+TGG + chr4_1:66277115-66277134 Msa0565390:CDS 55.0%
GTGCATCCGTACTCACAGCT+GGG + chr4_1:66277116-66277135 Msa0565390:CDS 55.0%
CATGCCATCGGCATTTCAGC+AGG + chr4_1:66277190-66277209 Msa0565390:CDS 55.0%
CTACCACCAATCTCTGGCAG+CGG + chr4_1:66277232-66277251 Msa0565390:CDS 55.0%
GGAAGTTCCACCAGCATTCC+TGG + chr4_1:66277331-66277350 Msa0565390:CDS 55.0%
AGTTCCACCAGCATTCCTGG+TGG + chr4_1:66277334-66277353 Msa0565390:intron 55.0%
GTTTCCACCAGGAATGCTGG+TGG - chr4_1:66277341-66277360 None:intergenic 55.0%
!! GGGGCAGCTGATGGATTCAA+AGG - chr4_1:66277367-66277386 None:intergenic 55.0%
GTACTAGTAGGGGCAGCTGA+TGG - chr4_1:66277376-66277395 None:intergenic 55.0%
GTTGACATGTGGACCAGTGG+TGG + chr4_1:66277595-66277614 Msa0565390:intron 55.0%
CATGTGGACCAGTGGTGGTT+AGG + chr4_1:66277600-66277619 Msa0565390:intron 55.0%
GGTGCAAAATGCTGCTGCGA+TGG - chr4_1:66277842-66277861 None:intergenic 55.0%
! CAGCAGCATTTTGCACCGCA+CGG + chr4_1:66277845-66277864 Msa0565390:CDS 55.0%
! AGCAGCATTTTGCACCGCAC+GGG + chr4_1:66277846-66277865 Msa0565390:CDS 55.0%
GTTGGGACTGCTTAGGTGGT+TGG - chr4_1:66277964-66277983 None:intergenic 55.0%
!! ACCATTTTCCGACTCGCCGC+CGG - chr4_1:66271390-66271409 None:intergenic 60.0%
AATATACCGAGTCGCGGCGG+CGG + chr4_1:66272222-66272241 Msa0565390:CDS 60.0%
AGTGACCGATATGCTGGCCG+TGG + chr4_1:66272261-66272280 Msa0565390:CDS 60.0%
AACTTGCACCACCGCCACCA+CGG - chr4_1:66272281-66272300 None:intergenic 60.0%
GTGGAGGAGCCTCCATAAGC+AGG - chr4_1:66272630-66272649 None:intergenic 60.0%
ACAGGCAGCCACCATCTTGG+AGG + chr4_1:66272685-66272704 Msa0565390:CDS 60.0%
GCAAGGGACAGAACCAGAGG+AGG + chr4_1:66274306-66274325 Msa0565390:CDS 60.0%
TGTCCCGGCTCCAGAAACAG+TGG - chr4_1:66274425-66274444 None:intergenic 60.0%
! CGCTGCCAGAGATTGGTGGT+AGG - chr4_1:66277234-66277253 None:intergenic 60.0%
!! GAAGCACCGCTGCCAGAGAT+TGG - chr4_1:66277241-66277260 None:intergenic 60.0%
! CGGGTTGACATGTGGACCAG+TGG + chr4_1:66277592-66277611 Msa0565390:intron 60.0%
CCAGGCCCTTGAACCCACAT+AGG - chr4_1:66277725-66277744 None:intergenic 60.0%
CCTATGTGGGTTCAAGGGCC+TGG + chr4_1:66277722-66277741 Msa0565390:CDS 60.0%
AATGCTGCTGCGATGGCTGC+TGG - chr4_1:66277835-66277854 None:intergenic 60.0%
!! CGGCAAGGGAAGCATCCCTA+GGG - chr4_1:66277931-66277950 None:intergenic 60.0%
CCTAGGGATGCTTCCCTTGC+CGG + chr4_1:66277929-66277948 Msa0565390:CDS 60.0%
!! TTGGCTTTGGGAGCCGGCAA+GGG - chr4_1:66277945-66277964 None:intergenic 60.0%
!! AGGTGGTTGGCTTTGGGAGC+CGG - chr4_1:66277951-66277970 None:intergenic 60.0%
TGCGGCGGAACCCTAACTCG+AGG + chr4_1:66271296-66271315 Msa0565390:five_prime_UTR 65.0%
GCGGCGGAACCCTAACTCGA+GGG + chr4_1:66271297-66271316 Msa0565390:five_prime_UTR 65.0%
CGGCGGAACCCTAACTCGAG+GGG + chr4_1:66271298-66271317 Msa0565390:five_prime_UTR 65.0%
ACCGGCGGCGAGTCGGAAAA+TGG + chr4_1:66271386-66271405 Msa0565390:CDS 65.0%
GACCGATATGCTGGCCGTGG+TGG + chr4_1:66272264-66272283 Msa0565390:CDS 65.0%
CGCCACCACGGCCAGCATAT+CGG - chr4_1:66272269-66272288 None:intergenic 65.0%
CGATATGCTGGCCGTGGTGG+CGG + chr4_1:66272267-66272286 Msa0565390:CDS 65.0%
GATGGGTAGGCCACAGGCCA+AGG + chr4_1:66273299-66273318 Msa0565390:CDS 65.0%
CCAGTGGCAACACCAGCACC+AGG - chr4_1:66277071-66277090 None:intergenic 65.0%
!! CCTGGTGCTGGTGTTGCCAC+TGG + chr4_1:66277068-66277087 Msa0565390:CDS 65.0%
GCACCGCTGCCAGAGATTGG+TGG - chr4_1:66277238-66277257 None:intergenic 65.0%
!! CCGGCAAGGGAAGCATCCCT+AGG - chr4_1:66277932-66277951 None:intergenic 65.0%
!! GTTGGCTTTGGGAGCCGGCA+AGG - chr4_1:66277946-66277965 None:intergenic 65.0%
CGGGTATACCGGCGGCGAGT+CGG + chr4_1:66271379-66271398 Msa0565390:CDS 70.0%
!! TATGCTGGCCGTGGTGGCGG+TGG + chr4_1:66272270-66272289 Msa0565390:CDS 70.0%
TCTGCATGGTCGGCGAGCCC+AGG + chr4_1:66273249-66273268 Msa0565390:CDS 70.0%
GGCACGGATGCCTTGGCCTG+TGG - chr4_1:66273312-66273331 None:intergenic 70.0%
ATACCGAGTCGCGGCGGCGG+TGG + chr4_1:66272225-66272244 Msa0565390:CDS 75.0%
! GGCGGCGGTGGTGGTAGGAC+TGG + chr4_1:66272237-66272256 Msa0565390:CDS 75.0%
! CCACCACCGCCGCCGCGACT+CGG - chr4_1:66272231-66272250 None:intergenic 80.0%
!! GTCGCGGCGGCGGTGGTGGT+AGG + chr4_1:66272232-66272251 Msa0565390:CDS 80.0%
! CCGAGTCGCGGCGGCGGTGG+TGG + chr4_1:66272228-66272247 Msa0565390:CDS 85.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 66270900 66278110 66270900 ID=Msa0565390;Name=Msa0565390
chr4_1 mRNA 66270900 66278110 66270900 ID=Msa0565390-mRNA-1;Parent=Msa0565390;Name=Msa0565390-mRNA-1;_AED=0.03;_eAED=0.03;_QI=433|0.88|0.8|1|1|1|10|101|825
chr4_1 exon 66270900 66271519 66270900 ID=Msa0565390-mRNA-1:exon:21391;Parent=Msa0565390-mRNA-1
chr4_1 exon 66271614 66271657 66271614 ID=Msa0565390-mRNA-1:exon:21392;Parent=Msa0565390-mRNA-1
chr4_1 exon 66272180 66272321 66272180 ID=Msa0565390-mRNA-1:exon:21393;Parent=Msa0565390-mRNA-1
chr4_1 exon 66272577 66272706 66272577 ID=Msa0565390-mRNA-1:exon:21394;Parent=Msa0565390-mRNA-1
chr4_1 exon 66273191 66273801 66273191 ID=Msa0565390-mRNA-1:exon:21395;Parent=Msa0565390-mRNA-1
chr4_1 exon 66274245 66274527 66274245 ID=Msa0565390-mRNA-1:exon:21396;Parent=Msa0565390-mRNA-1
chr4_1 exon 66274604 66274883 66274604 ID=Msa0565390-mRNA-1:exon:21397;Parent=Msa0565390-mRNA-1
chr4_1 exon 66275544 66275702 66275544 ID=Msa0565390-mRNA-1:exon:21398;Parent=Msa0565390-mRNA-1
chr4_1 exon 66277011 66277352 66277011 ID=Msa0565390-mRNA-1:exon:21399;Parent=Msa0565390-mRNA-1
chr4_1 exon 66277710 66278110 66277710 ID=Msa0565390-mRNA-1:exon:21400;Parent=Msa0565390-mRNA-1
chr4_1 five_prime_UTR 66270900 66271332 66270900 ID=Msa0565390-mRNA-1:five_prime_utr;Parent=Msa0565390-mRNA-1
chr4_1 CDS 66271333 66271519 66271333 ID=Msa0565390-mRNA-1:cds;Parent=Msa0565390-mRNA-1
chr4_1 CDS 66271614 66271657 66271614 ID=Msa0565390-mRNA-1:cds;Parent=Msa0565390-mRNA-1
chr4_1 CDS 66272180 66272321 66272180 ID=Msa0565390-mRNA-1:cds;Parent=Msa0565390-mRNA-1
chr4_1 CDS 66272577 66272706 66272577 ID=Msa0565390-mRNA-1:cds;Parent=Msa0565390-mRNA-1
chr4_1 CDS 66273191 66273801 66273191 ID=Msa0565390-mRNA-1:cds;Parent=Msa0565390-mRNA-1
chr4_1 CDS 66274245 66274527 66274245 ID=Msa0565390-mRNA-1:cds;Parent=Msa0565390-mRNA-1
chr4_1 CDS 66274604 66274883 66274604 ID=Msa0565390-mRNA-1:cds;Parent=Msa0565390-mRNA-1
chr4_1 CDS 66275544 66275702 66275544 ID=Msa0565390-mRNA-1:cds;Parent=Msa0565390-mRNA-1
chr4_1 CDS 66277011 66277352 66277011 ID=Msa0565390-mRNA-1:cds;Parent=Msa0565390-mRNA-1
chr4_1 CDS 66277710 66278009 66277710 ID=Msa0565390-mRNA-1:cds;Parent=Msa0565390-mRNA-1
chr4_1 three_prime_UTR 66278010 66278110 66278010 ID=Msa0565390-mRNA-1:three_prime_utr;Parent=Msa0565390-mRNA-1
Gene Sequence

>Msa0565390

ATGAGCGGTAAAGTAGGGGGACAGAAAGGTACATCATCATCGTTGTCGGGTATACCGGCGGCGAGTCGGAAAATGGTACAAAGCTTGAAAGAGATAGTTTCGAATATACCTGATAACGAGATCTATGCCACTCTCAAAGACTGTAACATGGACCCTAACGAAGCTGTTAGTCGTCTTCTTTCTCAAGATCCTTTTCATGAGGTTAAGAGCAAACGAGAAAAGAAAAAAGAGGGTAAGGATACAACAGAACCAAGGTCACGTGGGAGTAATTATAATATACCGAGTCGCGGCGGCGGTGGTGGTAGGACTGGTAGTGACCGATATGCTGGCCGTGGTGGCGGTGGTGCAAGTTCGAACCAATTCAGTAATAATGACTATGGTGTCCAGCAGAGTAAACCCGTGTTTAAGAAAGAAAATGGAACGCCTGCTTATGGAGGCTCCTCCACGTCTTATGCATCTAGTGTGATGGACAATAATGTAAACAGGCAGCCACCATCTTGGAGTGATTCTGTTGGTGTCCATGACGGACTGTCTTCATCATCACATCATGGTGGATTGCAATCTGCATGGTCGGCGAGCCCAGGTCAAGTGTCAATGGCTGACATTGTCAAGATGGGTAGGCCACAGGCCAAGGCATCCGTGCCTAAATCTTCTGTCCACAGTGGGAATCATCAGAATGCTTTTTCAACTCCAGCAGCCTCGCATCACAACTTGAATGTTACTGAAGCAAATAATGAATGGCCTTCTATTGAACCCAATGTTCAACAGAGTGATGAATGGCCTTCTATTGACCCCAATGTTCAACAGAGTGATGAATGGCCTTCTGTTGAGCACCCACCAACAGTTGTTGTTGATGCCCATCCAAATTCTGAGTATTATACAAATACATCTAACTTGGGTGAAGCTAATAGACAACTGCAGAACCACGGAAATGAATTTGTAGCTGAAGACAGTTCTGTTGAGGATGAGAATCCTGTTGATGTTGGATCTGCTTCTATACCTGCTAAAATTATATCTGATGATAATCCAGGAACTGCTTCTGGATATGATGATAATTTGTACAAGGACATAAATTCTTACCAGTCTCATCGACATCCTTTTGATGACAACGAAGCTGAAAATGGTGTTTCATCAGTGGCTACAAACTTAGAGCAGCTAAATTTACACACAGATGAGCAAGGGACAGAACCAGAGGAGGACAATTCTGATGTACTTATTCCAAATCACCTACAACTCCATACTCCAGAGTGTTTTAGTCTGAGCTTTGGAAGTTTTGGACCAAAACAAAATGCCACTGTTTCTGGAGCCGGGACACATTCATCTAGGCCCTTACAAAGTAACTTGGAGGAGACTTCTGGAGCTACTGATGTTTCAGCAATTGGGTCCTCAGATGCCAAAAATCCCGACTATTATGGGGATGAGCATATTGCTACTACCTCAGATGGCAATATATCCCACATAACTGGTGTGGATGCTAGGACTTATGAACATTCTTCCATTTCACAACCAGAGGCTTTAAAGTCTGAACCCTCTGAAACTGCTCAGGAAAATCAATATTCATTTCCTTCATCTTCGCATGAGTTTACATATGAAAATGCCCAACAACCAGAAGTTGCATATCCTCATTCACAAGCAAGCTCACAGATCCAGAACCTATCTCCCTTCTCCAGTGTAATGGCATATACAAATTCTTTGCCCAATGCTCTGTTGGCTTCAACGGTTCAAACACCAAGGGAGGATATCCCATACTCACCCTTCCCTGTTACACAAGCAATGCCTGCAAAATATAGCAACATGGCTTCTTCAATTGGTGGTTCCACGATAAACATGTCAGAGGCTTTAAGGGCAAACAGCATTTCGACGCCTCAAGCTCAACCTAATCAACAATCTTTGCCTGGTGCTGGTGTTGCCACTGGACCTTCACTTCCTCAACACCTTGCTGTGCATCCGTACTCACAGCTGGGACCTTTTGCCAATATGATAAGTTATCCGTTCATGCCTCAGAGCTATACCTACATGCCATCGGCATTTCAGCAGGCTTTTGCTGGAAATAGCACCTACCACCAATCTCTGGCAGCGGTGCTTCCACAATATAAAAATAGCATTTCTGTCAGCAGCTTGCCTCAGTCTGCTGCTATACCATCTGGATATGGTTTGGAAGTTCCACCAGCATTCCTGAATGAGAACAATCCTATGTGGGTTCAAGGGCCTGGTTCTCGAACAATGTCAGTTCCTCCCAGCACGTATTACAGCTTCCAGGGACAGAATCAACAACAACAACCAGGTGCATTTCGACAAAGCCAGCAGCCATCGCAGCAGCATTTTGCACCGCACGGGTACCCTAATAATTTCTACCATTCTCAGAGTGGAATTTCTCTAGAACATCAGCAGCAGAACCCTAGGGATGCTTCCCTTGCCGGCTCCCAAAGCCAACCACCTAAGCAGTCCCAACAACAATTGTGGCAAAACAGCTACTAA
Protein sequence

>Msa0565390

MSGKVGGQKGTSSSLSGIPAASRKMVQSLKEIVSNIPDNEIYATLKDCNMDPNEAVSRLLSQDPFHEVKSKREKKKEGKDTTEPRSRGSNYNIPSRGGGGGRTGSDRYAGRGGGGASSNQFSNNDYGVQQSKPVFKKENGTPAYGGSSTSYASSVMDNNVNRQPPSWSDSVGVHDGLSSSSHHGGLQSAWSASPGQVSMADIVKMGRPQAKASVPKSSVHSGNHQNAFSTPAASHHNLNVTEANNEWPSIEPNVQQSDEWPSIDPNVQQSDEWPSVEHPPTVVVDAHPNSEYYTNTSNLGEANRQLQNHGNEFVAEDSSVEDENPVDVGSASIPAKIISDDNPGTASGYDDNLYKDINSYQSHRHPFDDNEAENGVSSVATNLEQLNLHTDEQGTEPEEDNSDVLIPNHLQLHTPECFSLSFGSFGPKQNATVSGAGTHSSRPLQSNLEETSGATDVSAIGSSDAKNPDYYGDEHIATTSDGNISHITGVDARTYEHSSISQPEALKSEPSETAQENQYSFPSSSHEFTYENAQQPEVAYPHSQASSQIQNLSPFSSVMAYTNSLPNALLASTVQTPREDIPYSPFPVTQAMPAKYSNMASSIGGSTINMSEALRANSISTPQAQPNQQSLPGAGVATGPSLPQHLAVHPYSQLGPFANMISYPFMPQSYTYMPSAFQQAFAGNSTYHQSLAAVLPQYKNSISVSSLPQSAAIPSGYGLEVPPAFLNENNPMWVQGPGSRTMSVPPSTYYSFQGQNQQQQPGAFRQSQQPSQQHFAPHGYPNNFYHSQSGISLEHQQQNPRDASLAGSQSQPPKQSQQQLWQNSY*