AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0617770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0617770 MtrunA17_Chr8g0378471 98.387 186 3 0 1 186 1 186 1.74e-134 374
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0617770 AT1G26665.1 69.149 188 55 1 1 185 1 188 2.66e-93 270
Msa0617770 AT1G26665.2 68.617 188 56 1 1 185 1 188 2.28e-92 267
Msa0617770 AT5G41910.3 64.550 189 59 3 1 185 1 185 3.79e-78 231
Msa0617770 AT5G41910.1 64.550 189 59 3 1 185 1 185 3.79e-78 231
Msa0617770 AT5G41910.2 64.550 189 59 3 1 185 1 185 3.79e-78 231

Find 93 sgRNAs with CRISPR-Local

Find 597 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGGAGATGGATTGGATTT+TGG 0.189323 4_2:+68466835 None:intergenic
GGATTTGCGCAAGCATCTTT+TGG 0.272272 4_2:-68464164 Msa0617770:CDS
GTTCAGGTCAGACACTGTTT+TGG 0.304827 4_2:-68466168 Msa0617770:five_prime_UTR
GGCAGAAAAGTGTAACATTC+AGG 0.306492 4_2:-68464545 Msa0617770:CDS
TAACTATTCTTTAATAAGTA+AGG 0.309934 4_2:-68459560 Msa0617770:three_prime_UTR
AATCCAGCTGCAGGTGGAAA+TGG 0.318328 4_2:-68464880 Msa0617770:CDS
GTTTGGGTTAAGTTCAGTTT+TGG 0.320722 4_2:+68466884 None:intergenic
CTAAAAGTTTCAACCTCATC+AGG 0.325169 4_2:+68464121 None:intergenic
TTCAGTTCGGTTCGACAGTT+TGG 0.334486 4_2:+68466983 None:intergenic
CTGAAACTGTTGCTTCAAAA+TGG 0.339208 4_2:+68466220 None:intergenic
TGGTTCGAATTGTTTCATTA+TGG 0.347552 4_2:-68466195 Msa0617770:five_prime_UTR
GCTTGACAACATGGTCAAAT+TGG 0.360788 4_2:-68464566 Msa0617770:CDS
ACATCTTTCGTAAATTCATC+TGG 0.360790 4_2:+68464361 None:intergenic
TCTCAATGGAGTTGCTGATC+TGG 0.371043 4_2:+68464785 None:intergenic
CTAGGAGAGTTGCAACAATA+AGG 0.372955 4_2:+68459619 None:intergenic
GGCCGTCAGAAATTCCGTTC+AGG 0.388996 4_2:-68465945 Msa0617770:intron
GTTTCATTATGGTTCAGTTC+AGG 0.393306 4_2:-68466184 Msa0617770:five_prime_UTR
GCTTGATGTGTTGAGGGAAT+TGG 0.395045 4_2:-68459523 Msa0617770:three_prime_UTR
TAATCTCGAATGGTAGACTT+AGG 0.397527 4_2:+68466122 None:intergenic
TCAATTCCGTCTGCGTTTCC+CGG 0.397844 4_2:+68465973 None:intergenic
TTAGCCCTTGCATCTCCATT+TGG 0.401861 4_2:+68459757 None:intergenic
TTGAAGCAACAGTTTCAGTT+TGG 0.403600 4_2:-68466215 Msa0617770:five_prime_UTR
TTTATAATAAAATTCTGAAC+TGG 0.422821 4_2:-68466937 Msa0617770:five_prime_UTR
GATACAGCAGCTTCTGCATC+AGG 0.423664 4_2:-68464835 Msa0617770:CDS
GTATGGAACTCTTAATACTT+TGG 0.427284 4_2:-68459681 Msa0617770:three_prime_UTR
ACCTTCAAAAGCTGCGCAAT+AGG 0.436118 4_2:+68466749 None:intergenic
ATCCAGCTGCAGGTGGAAAT+GGG 0.446263 4_2:-68464879 Msa0617770:CDS
TGTGTAGGAGTTGAAACGTT+TGG 0.447881 4_2:-68459800 Msa0617770:intron
TGACGGAGCTGTTGCGAGAC+CGG 0.448687 4_2:+68466783 None:intergenic
AGCTGTTGCGAGACCGGAGA+TGG 0.465557 4_2:+68466789 None:intergenic
AATCTCGAATGGTAGACTTA+GGG 0.469667 4_2:+68466123 None:intergenic
CATTTGCAAAGCAGAATTGA+AGG 0.469793 4_2:+68464720 None:intergenic
AACTCAGAGCTCATCTCGCC+GGG 0.476886 4_2:-68465991 Msa0617770:five_prime_UTR
GTCCCATTTCCACCTGCAGC+TGG 0.480298 4_2:+68464877 None:intergenic
AATATTAGTTCGATTCAGTT+CGG 0.481429 4_2:+68466970 None:intergenic
TTAAAGAATAGTTATAATGA+TGG 0.481671 4_2:+68459569 None:intergenic
AGAGCTGATGGATGAGGCCC+AGG 0.485269 4_2:+68464758 None:intergenic
TACTCACTTAACAACCTCCA+TGG 0.486201 4_2:+68464519 None:intergenic
GACGGACCTGCTGCGGAGAT+CGG 0.488222 4_2:+68466817 None:intergenic
TGAGGGAGAGCTGATGGATG+AGG 0.506932 4_2:+68464752 None:intergenic
TAATGAGCTTGATGTGTTGA+GGG 0.507265 4_2:-68459529 Msa0617770:three_prime_UTR
AACTATTCTTTAATAAGTAA+GGG 0.507493 4_2:-68459559 Msa0617770:three_prime_UTR
CCATCTCCGATCTCCGCAGC+AGG 0.509400 4_2:-68466823 Msa0617770:five_prime_UTR
TCTCCATTTGGTAGTACACT+TGG 0.510095 4_2:+68459769 None:intergenic
TGCGGAGATCGGAGATGGAT+TGG 0.513307 4_2:+68466828 None:intergenic
GAACTCAGAGCTCATCTCGC+CGG 0.513578 4_2:-68465992 Msa0617770:five_prime_UTR
GTTCGGTTTGTATCAACAGC+GGG 0.514965 4_2:+68466072 None:intergenic
TTCCAGCAATGGTCTTGTTG+CGG 0.516502 4_2:-68464590 Msa0617770:intron
GGTCCGTCGCGACCCATCTC+CGG 0.516868 4_2:-68466802 Msa0617770:five_prime_UTR
GCACCAAGTGTACTACCAAA+TGG 0.518257 4_2:-68459772 Msa0617770:CDS
AACTCCATTGAGAAAACCCT+GGG 0.533119 4_2:-68464775 Msa0617770:CDS
TGGAGTTGCTGATCTGGCTA+AGG 0.534854 4_2:+68464791 None:intergenic
CCTGCTGCGGAGATCGGAGA+TGG 0.536484 4_2:+68466823 None:intergenic
AAGAGAAATACATGCGTTGG+AGG 0.539174 4_2:+68464692 None:intergenic
TCATCACAAAATCCAGCTGC+AGG 0.541242 4_2:-68464889 Msa0617770:CDS
GATAAAATGTAAGCAAAACT+AGG 0.541577 4_2:+68459601 None:intergenic
GCAAAGAATCAAATCACTAA+AGG 0.546143 4_2:-68464322 Msa0617770:CDS
AAATACATGCGTTGGAGGAG+TGG 0.546320 4_2:+68464697 None:intergenic
TCGAAGAGAAATACATGCGT+TGG 0.548998 4_2:+68464689 None:intergenic
AGACGGTGAGGGAGAGCTGA+TGG 0.558529 4_2:+68464746 None:intergenic
GCTGTTGCGAGACCGGAGAT+GGG 0.565844 4_2:+68466790 None:intergenic
TGTTGCGGAGCTTGACAACA+TGG 0.565845 4_2:-68464575 Msa0617770:CDS
GAGTTGAGTAGTAAATGATA+AGG 0.568083 4_2:-68466095 Msa0617770:five_prime_UTR
CAACTCCATTGAGAAAACCC+TGG 0.569783 4_2:-68464776 Msa0617770:CDS
AAATTCAGTTAACAGAGAAA+CGG 0.572036 4_2:-68464920 Msa0617770:intron
AAAAGCTGCGCAATAGGAGA+TGG 0.573572 4_2:+68466755 None:intergenic
ATCTCGCCGGGAAACGCAGA+CGG 0.573607 4_2:-68465979 Msa0617770:five_prime_UTR
ACTCACTTAACAACCTCCAT+GGG 0.578610 4_2:+68464520 None:intergenic
GTGTAACATTCAGGTTCCCA+TGG 0.582136 4_2:-68464536 Msa0617770:CDS
TTAATGAGCTTGATGTGTTG+AGG 0.585722 4_2:-68459530 Msa0617770:three_prime_UTR
AGTTAACAGAGAAACGGCAA+TGG 0.586544 4_2:-68464914 Msa0617770:intron
TACTACCAAATGGAGATGCA+AGG 0.587784 4_2:-68459762 Msa0617770:CDS
GGGTCGCGACGGACCTGCTG+CGG 0.594837 4_2:+68466810 None:intergenic
AATAGGAGATGGTGAGGTGA+CGG 0.599391 4_2:+68466766 None:intergenic
TGTCATTAACAGAAAAGCAA+AGG 0.600632 4_2:+68459704 None:intergenic
GGAGCAGAACTTCCCTGATG+AGG 0.602873 4_2:-68464134 Msa0617770:CDS
AGCAGAATTGAAGGTTGAGA+CGG 0.608568 4_2:+68464729 None:intergenic
GAGCTGATGGATGAGGCCCA+GGG 0.610614 4_2:+68464759 None:intergenic
AATTGAAGGTTGAGACGGTG+AGG 0.615677 4_2:+68464734 None:intergenic
TCACAAAATCCAGCTGCAGG+TGG 0.616311 4_2:-68464886 Msa0617770:CDS
TAAAAGTTTCAACCTCATCA+GGG 0.622241 4_2:+68464122 None:intergenic
ATTGAAGGTTGAGACGGTGA+GGG 0.623183 4_2:+68464735 None:intergenic
TCGAATGGTAGACTTAGGGA+TGG 0.623629 4_2:+68466127 None:intergenic
CGAATGGTAGACTTAGGGAT+GGG 0.631088 4_2:+68466128 None:intergenic
TGTTCGGTTTGTATCAACAG+CGG 0.639909 4_2:+68466071 None:intergenic
AGACCGGAGATGGGTCGCGA+CGG 0.641892 4_2:+68466799 None:intergenic
TAACATTCAGGTTCCCATGG+AGG 0.642133 4_2:-68464533 Msa0617770:CDS
AATGGGACGCTGATATCTCA+CGG 0.648299 4_2:-68464862 Msa0617770:CDS
CTGCGCAATAGGAGATGGTG+AGG 0.648856 4_2:+68466760 None:intergenic
AACCTGAACGGAATTTCTGA+CGG 0.651973 4_2:+68465943 None:intergenic
ATAAAAGAAGAAAACCTGAA+CGG 0.652297 4_2:+68465931 None:intergenic
ACTACCAAATGGAGATGCAA+GGG 0.655745 4_2:-68459761 Msa0617770:CDS
ACGCAGACGGAATTGATCGT+CGG 0.669039 4_2:-68465966 Msa0617770:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATAATCTTTTTATG+CGG - chr4_2:68462022-68462041 Msa0617770:intron 10.0%
!! CTTATTAAAAATTATATATG+AGG + chr4_2:68463380-68463399 None:intergenic 10.0%
!! TTTCATTAATATATAAATCT+TGG - chr4_2:68466680-68466699 Msa0617770:intron 10.0%
!!! AGTTCAGAATTTTATTATAA+AGG + chr4_2:68459579-68459598 None:intergenic 15.0%
!! TTTATAATAAAATTCTGAAC+TGG - chr4_2:68459578-68459597 Msa0617770:three_prime_UTR 15.0%
!! ATTGTTAACTTAAACTTAAA+TGG + chr4_2:68460242-68460261 None:intergenic 15.0%
!! TATTCAAATTATCACAATAT+TGG - chr4_2:68460832-68460851 Msa0617770:intron 15.0%
!! AATTAAGTTATGTAAGTAAA+AGG + chr4_2:68460882-68460901 None:intergenic 15.0%
!! AAGTAAAATATTATCCATTT+GGG + chr4_2:68461898-68461917 None:intergenic 15.0%
!!! TTTAATTGTTGACTTATTTT+TGG - chr4_2:68462103-68462122 Msa0617770:intron 15.0%
!!! TAATAAGTTTTGTATAATGT+AGG - chr4_2:68463393-68463412 Msa0617770:intron 15.0%
!!! ATAGATATATTTTGAGTATT+CGG - chr4_2:68463825-68463844 Msa0617770:intron 15.0%
!! GAAATTATACTTTATATTTC+TGG - chr4_2:68464139-68464158 Msa0617770:CDS 15.0%
!! AACATATTCAAATATAATGA+TGG + chr4_2:68464569-68464588 None:intergenic 15.0%
!! AAAAATTGTCAAGATTATAA+CGG - chr4_2:68464855-68464874 Msa0617770:CDS 15.0%
!! TTAAAGAATAGTTATAATGA+TGG + chr4_2:68466949-68466968 None:intergenic 15.0%
!! TAACTATTCTTTAATAAGTA+AGG - chr4_2:68466955-68466974 Msa0617770:five_prime_UTR 15.0%
!! AACTATTCTTTAATAAGTAA+GGG - chr4_2:68466956-68466975 Msa0617770:five_prime_UTR 15.0%
!!! ATGTTTTGGTTTTTCTATTA+TGG - chr4_2:68459883-68459902 Msa0617770:intron 20.0%
!!! TGTTTTGGTTTTTCTATTAT+GGG - chr4_2:68459884-68459903 Msa0617770:intron 20.0%
!!! TTATGGGTTAAAATTTCATA+TGG - chr4_2:68459900-68459919 Msa0617770:intron 20.0%
!!! TATGGGTTAAAATTTCATAT+GGG - chr4_2:68459901-68459920 Msa0617770:intron 20.0%
!! CTTAATACAATTGTGAAATA+GGG + chr4_2:68460758-68460777 None:intergenic 20.0%
!! TCTTAATACAATTGTGAAAT+AGG + chr4_2:68460759-68460778 None:intergenic 20.0%
!! TACATAACTTAATTCAGAAT+AGG - chr4_2:68460888-68460907 Msa0617770:intron 20.0%
!! ACATAACTTAATTCAGAATA+GGG - chr4_2:68460889-68460908 Msa0617770:intron 20.0%
!!! AAACACTTCAATTACATTTT+TGG - chr4_2:68461127-68461146 Msa0617770:intron 20.0%
!!! AACACTTCAATTACATTTTT+GGG - chr4_2:68461128-68461147 Msa0617770:intron 20.0%
!! CAAGTAAAATATTATCCATT+TGG + chr4_2:68461899-68461918 None:intergenic 20.0%
!!! TTATTTTTGTTCATATTCTG+TGG - chr4_2:68462272-68462291 Msa0617770:intron 20.0%
!! AAAGCAGCTTATTAAATATA+TGG + chr4_2:68462302-68462321 None:intergenic 20.0%
!! CTAAATAAATGTGATAAACT+GGG + chr4_2:68462525-68462544 None:intergenic 20.0%
!! AGAAGAATATATCAAAACAA+AGG + chr4_2:68462955-68462974 None:intergenic 20.0%
!!! GAATAGTTATTTCAATAGAA+AGG + chr4_2:68463032-68463051 None:intergenic 20.0%
!! ATATAAATGCTTGATGTATT+GGG - chr4_2:68463270-68463289 Msa0617770:intron 20.0%
!! TCAAAATATATCTATGAAGA+AGG + chr4_2:68463820-68463839 None:intergenic 20.0%
!! ATAGTGAAAAATACAGAAAA+AGG - chr4_2:68464241-68464260 Msa0617770:intron 20.0%
!!! ATCAAAATAATCTTCTCTTT+TGG + chr4_2:68464527-68464546 None:intergenic 20.0%
!!! GAGAAGATTATTTTGATTTT+AGG - chr4_2:68464530-68464549 Msa0617770:CDS 20.0%
!! AAAAAAAAAACTTGTACCTA+CGG - chr4_2:68464687-68464706 Msa0617770:intron 20.0%
!! AAAATTGTCAAGATTATAAC+GGG - chr4_2:68464856-68464875 Msa0617770:CDS 20.0%
!!! AATTTGACTTATATGTTGTT+TGG - chr4_2:68465089-68465108 Msa0617770:intron 20.0%
!!! TATAAATGACATTGTTTTCA+GGG - chr4_2:68465187-68465206 Msa0617770:intron 20.0%
!!! TAAATCTTATAATTGACTCA+AGG + chr4_2:68466641-68466660 None:intergenic 20.0%
!! AGTCAATTATAAGATTTACA+AGG - chr4_2:68466643-68466662 Msa0617770:intron 20.0%
!!! TTTTGCTTACATTTTATCAA+TGG - chr4_2:68466919-68466938 Msa0617770:five_prime_UTR 20.0%
! AATATTAGTTCGATTCAGTT+CGG + chr4_2:68459548-68459567 None:intergenic 25.0%
!!! AGTTTTGGTTTTTCCAAAAA+CGG + chr4_2:68459619-68459638 None:intergenic 25.0%
!!! CAATCACTGTTTTTTAGTTT+GGG + chr4_2:68459650-68459669 None:intergenic 25.0%
!!! ACAATCACTGTTTTTTAGTT+TGG + chr4_2:68459651-68459670 None:intergenic 25.0%
!! AATTTCATATGGGTTAAAGA+AGG - chr4_2:68459911-68459930 Msa0617770:intron 25.0%
! ATACAAATTTCATCAGCAAA+AGG + chr4_2:68460002-68460021 None:intergenic 25.0%
!! CAGATAAGATTTTGCATATA+TGG - chr4_2:68460135-68460154 Msa0617770:intron 25.0%
! ATAAAAGAAGAAAACCTGAA+CGG + chr4_2:68460587-68460606 None:intergenic 25.0%
! AGATGTTTCAAATTGAAAGA+AGG - chr4_2:68460983-68461002 Msa0617770:intron 25.0%
!! ACACTTCAATTACATTTTTG+GGG - chr4_2:68461129-68461148 Msa0617770:intron 25.0%
! GCAAGAAAATTAGTGAATTA+GGG + chr4_2:68461218-68461237 None:intergenic 25.0%
! AGCAAGAAAATTAGTGAATT+AGG + chr4_2:68461219-68461238 None:intergenic 25.0%
! TTCAACTCTCAAAATTATCT+TGG - chr4_2:68461302-68461321 Msa0617770:intron 25.0%
!! GAGACTAATATAATTTTCTG+TGG + chr4_2:68461521-68461540 None:intergenic 25.0%
! AAATTCAGTTAACAGAGAAA+CGG - chr4_2:68461595-68461614 Msa0617770:intron 25.0%
!!! GTTTTAGCTTAATTGATGAT+GGG - chr4_2:68462125-68462144 Msa0617770:intron 25.0%
!! TCTAACTTAGTATTTCTGTT+TGG - chr4_2:68462324-68462343 Msa0617770:intron 25.0%
!! CTAACTTAGTATTTCTGTTT+GGG - chr4_2:68462325-68462344 Msa0617770:intron 25.0%
!! TAACTTAGTATTTCTGTTTG+GGG - chr4_2:68462326-68462345 Msa0617770:intron 25.0%
! GCTAAATAAATGTGATAAAC+TGG + chr4_2:68462526-68462545 None:intergenic 25.0%
!! TTAAGAAAAAGAAAAGTGCA+AGG + chr4_2:68462860-68462879 None:intergenic 25.0%
! AGTTTACTACAAATTCTAGT+AGG + chr4_2:68462898-68462917 None:intergenic 25.0%
! TGATATATTCTTCTAGTCAT+TGG - chr4_2:68462961-68462980 Msa0617770:intron 25.0%
! CATATAAATGCTTGATGTAT+TGG - chr4_2:68463269-68463288 Msa0617770:intron 25.0%
! AAACATCATTGATCATATCT+AGG + chr4_2:68463441-68463460 None:intergenic 25.0%
!! TGTTCTTGTTTCAATTCAAT+GGG - chr4_2:68463478-68463497 Msa0617770:intron 25.0%
! TTGTTTGAAAACACAATTCT+AGG - chr4_2:68463511-68463530 Msa0617770:intron 25.0%
! TGTATAGGCTATAATACAAT+CGG - chr4_2:68463869-68463888 Msa0617770:intron 25.0%
! ACGATATCAGTCATAATAAA+AGG + chr4_2:68463917-68463936 None:intergenic 25.0%
!!! TTCGTTTTTTCCAAATTTTG+AGG + chr4_2:68464669-68464688 None:intergenic 25.0%
! AAATTGTCAAGATTATAACG+GGG - chr4_2:68464857-68464876 Msa0617770:CDS 25.0%
!!! TTATAGGTAGTTTTAGACAA+GGG + chr4_2:68464939-68464958 None:intergenic 25.0%
! TGTAACTTAATTACTTGTTC+TGG + chr4_2:68465062-68465081 None:intergenic 25.0%
! AAACATCACATAAAACTACT+TGG + chr4_2:68465128-68465147 None:intergenic 25.0%
! AGTGAATGTCATAAAACAAA+AGG + chr4_2:68465161-68465180 None:intergenic 25.0%
!! GTATAAATGACATTGTTTTC+AGG - chr4_2:68465186-68465205 Msa0617770:intron 25.0%
! AAACCATTAAGTACATCTAA+TGG - chr4_2:68465931-68465950 Msa0617770:intron 25.0%
! AAACCATTAGATGTACTTAA+TGG + chr4_2:68465937-68465956 None:intergenic 25.0%
!! TTAAGTACATCTAATGGTTT+TGG - chr4_2:68465937-68465956 Msa0617770:intron 25.0%
! AAACCATTTCCATAGAAAAA+TGG - chr4_2:68466089-68466108 Msa0617770:five_prime_UTR 25.0%
! AACCATTTCCATAGAAAAAT+GGG - chr4_2:68466090-68466109 Msa0617770:five_prime_UTR 25.0%
! TGTTTGGTTGTAAAATATGA+TGG - chr4_2:68466506-68466525 Msa0617770:intron 25.0%
! GATAAAATGTAAGCAAAACT+AGG + chr4_2:68466917-68466936 None:intergenic 25.0%
! GTTATTAACTGAACCGTTTT+TGG - chr4_2:68459603-68459622 Msa0617770:three_prime_UTR 30.0%
! AAGAAGGTTGTTATTGTTGA+TGG - chr4_2:68459927-68459946 Msa0617770:intron 30.0%
!! TGTTATTGTTGATGGTAATC+AGG - chr4_2:68459935-68459954 Msa0617770:intron 30.0%
TTAATCAAAATCGCATTCTC+AGG + chr4_2:68459978-68459997 None:intergenic 30.0%
TTTGCAGAAAAAACTATAGC+AGG + chr4_2:68460189-68460208 None:intergenic 30.0%
TGGTTCGAATTGTTTCATTA+TGG - chr4_2:68460320-68460339 Msa0617770:intron 30.0%
GAGTTGAGTAGTAAATGATA+AGG - chr4_2:68460420-68460439 Msa0617770:intron 30.0%
ACACGCTATGATAATTGAAT+TGG - chr4_2:68460642-68460661 Msa0617770:intron 30.0%
CACGCTATGATAATTGAATT+GGG - chr4_2:68460643-68460662 Msa0617770:intron 30.0%
AAATAGGGCAAATAAATCTG+AGG + chr4_2:68460743-68460762 None:intergenic 30.0%
TGTAAGTAAAAGGACAAGAA+TGG + chr4_2:68460872-68460891 None:intergenic 30.0%
TCACTTCAAACAAAATTGCT+TGG - chr4_2:68461484-68461503 Msa0617770:intron 30.0%
! TAATATAATTTTCTGTGGCC+TGG + chr4_2:68461516-68461535 None:intergenic 30.0%
AACAGAACAAACGAAATACA+GGG + chr4_2:68461858-68461877 None:intergenic 30.0%
AAACAGAACAAACGAAATAC+AGG + chr4_2:68461859-68461878 None:intergenic 30.0%
! ATATTATCCATTTGGGACAT+GGG + chr4_2:68461891-68461910 None:intergenic 30.0%
! AATATTATCCATTTGGGACA+TGG + chr4_2:68461892-68461911 None:intergenic 30.0%
!!! ACTTGAATTTTTTCCAGCAA+TGG - chr4_2:68461914-68461933 Msa0617770:intron 30.0%
! CTGTCACTTAAAGAAAAACA+TGG + chr4_2:68462050-68462069 None:intergenic 30.0%
TGACAGAATATGTTTCTTTG+CGG - chr4_2:68462064-68462083 Msa0617770:intron 30.0%
!!! GGTTTTAGCTTAATTGATGA+TGG - chr4_2:68462124-68462143 Msa0617770:intron 30.0%
ACATCTTTCGTAAATTCATC+TGG + chr4_2:68462157-68462176 None:intergenic 30.0%
GCAAAGAATCAAATCACTAA+AGG - chr4_2:68462193-68462212 Msa0617770:intron 30.0%
TAAAAGTTTCAACCTCATCA+GGG + chr4_2:68462396-68462415 None:intergenic 30.0%
!! TTTTTATTTCAACGTAGACC+CGG - chr4_2:68462464-68462483 Msa0617770:intron 30.0%
GGTAAAGAATCCAACAAATA+AGG + chr4_2:68462668-68462687 None:intergenic 30.0%
! TAATTCAGTTGTTTCCATCA+TGG - chr4_2:68463068-68463087 Msa0617770:intron 30.0%
!!! TGATTTTTTCACAACCATGA+TGG + chr4_2:68463085-68463104 None:intergenic 30.0%
GATATTCATGTTTGCAATGT+TGG + chr4_2:68463333-68463352 None:intergenic 30.0%
TTGTATAATGTAGGATCTGA+TGG - chr4_2:68463402-68463421 Msa0617770:intron 30.0%
AATTGAAACAAGAACACAGA+AGG + chr4_2:68463474-68463493 None:intergenic 30.0%
! GTGTTCTTGTTTCAATTCAA+TGG - chr4_2:68463477-68463496 Msa0617770:intron 30.0%
! GTTCTTGTTTCAATTCAATG+GGG - chr4_2:68463479-68463498 Msa0617770:intron 30.0%
! TTCTTGTTTCAATTCAATGG+GGG - chr4_2:68463480-68463499 Msa0617770:intron 30.0%
!! TGATTGGTACTGATAAGATA+AGG - chr4_2:68463726-68463745 Msa0617770:intron 30.0%
CTATACACTTGGCATAATAA+GGG + chr4_2:68463856-68463875 None:intergenic 30.0%
TGTATTATAGCCTATACACT+TGG + chr4_2:68463867-68463886 None:intergenic 30.0%
TTGTTCGGTACTAAATTACA+TGG + chr4_2:68463982-68464001 None:intergenic 30.0%
AAATGGACATATTGCTAGTA+TGG + chr4_2:68464030-68464049 None:intergenic 30.0%
!! AAGGCATTGATGTAAGTAAA+TGG + chr4_2:68464047-68464066 None:intergenic 30.0%
TTATATCTTACTCTTCTCCT+TGG + chr4_2:68464213-68464232 None:intergenic 30.0%
! GAAATTGAGTAGAAAAGTGT+GGG + chr4_2:68464298-68464317 None:intergenic 30.0%
AGAAATTGAGTAGAAAAGTG+TGG + chr4_2:68464299-68464318 None:intergenic 30.0%
ATTAAAAGTAGAGAGAGGAA+AGG + chr4_2:68464327-68464346 None:intergenic 30.0%
CCATTATTAAAAGTAGAGAG+AGG + chr4_2:68464332-68464351 None:intergenic 30.0%
!! CCTCTCTCTACTTTTAATAA+TGG - chr4_2:68464329-68464348 Msa0617770:CDS 30.0%
! CTCAATTTTTCTTCCTATGT+GGG - chr4_2:68464368-68464387 Msa0617770:CDS 30.0%
! GTCTTTTAGACTTTTACCTA+CGG + chr4_2:68464741-68464760 None:intergenic 30.0%
GTCAATTATGCATTATCCAT+AGG - chr4_2:68464773-68464792 Msa0617770:CDS 30.0%
!!! GTTATAGGTAGTTTTAGACA+AGG + chr4_2:68464940-68464959 None:intergenic 30.0%
TAAAACTACCTATAACATGC+AGG - chr4_2:68464944-68464963 Msa0617770:intron 30.0%
TGTGTTATCTTACTTAGGAT+GGG + chr4_2:68464984-68465003 None:intergenic 30.0%
TAGTGTGTGTTATCTTACTT+AGG + chr4_2:68464989-68465008 None:intergenic 30.0%
AAGTAAGATAACACACACTA+AGG - chr4_2:68464989-68465008 Msa0617770:intron 30.0%
! TTGACTTATATGTTGTTTGG+TGG - chr4_2:68465092-68465111 Msa0617770:intron 30.0%
CATAAAACAAAAGGATACGA+TGG + chr4_2:68465152-68465171 None:intergenic 30.0%
!! TATGAAGATGAATTTTCGAG+TGG - chr4_2:68465605-68465624 Msa0617770:intron 30.0%
! AACTTCTTCTGTTTGGAATT+GGG + chr4_2:68465755-68465774 None:intergenic 30.0%
! AAACTTCTTCTGTTTGGAAT+TGG + chr4_2:68465756-68465775 None:intergenic 30.0%
ATTCCAAACAGAAGAAGTTT+CGG - chr4_2:68465756-68465775 Msa0617770:intron 30.0%
AAACCATCAAGTACATCTAA+TGG - chr4_2:68465974-68465993 Msa0617770:five_prime_UTR 30.0%
AAACCATTAGATGTACTTGA+TGG + chr4_2:68465980-68465999 None:intergenic 30.0%
!! AACCCATTTTTCTATGGAAA+TGG + chr4_2:68466095-68466114 None:intergenic 30.0%
! TTTCCATAGAAAAATGGGTT+TGG - chr4_2:68466095-68466114 Msa0617770:five_prime_UTR 30.0%
AAACCATTTCCACAACAAAA+TGG - chr4_2:68466132-68466151 Msa0617770:five_prime_UTR 30.0%
!! AAACCATTTTGTTGTGGAAA+TGG + chr4_2:68466138-68466157 None:intergenic 30.0%
! ATGTCAAAACCATTTTGTTG+TGG + chr4_2:68466144-68466163 None:intergenic 30.0%
!!! ACAAAATGGTTTTGACATTC+CGG - chr4_2:68466146-68466165 Msa0617770:five_prime_UTR 30.0%
ATTATGTTGGGATTTATGCA+CGG - chr4_2:68466296-68466315 Msa0617770:intron 30.0%
TGATCATGAACAATCAACAA+GGG + chr4_2:68466361-68466380 None:intergenic 30.0%
ACAAAACACTAAGAACAATG+CGG + chr4_2:68466412-68466431 None:intergenic 30.0%
TTGTATCCTCACAAATAGAT+TGG - chr4_2:68466428-68466447 Msa0617770:intron 30.0%
TCTGTCTTTAATAACTGTGT+AGG - chr4_2:68466453-68466472 Msa0617770:intron 30.0%
! ATTGACTCAAGGATTCAATT+TGG + chr4_2:68466630-68466649 None:intergenic 30.0%
TGTCATTAACAGAAAAGCAA+AGG + chr4_2:68466814-68466833 None:intergenic 30.0%
! CTTTTCTGTTAATGACAGTA+TGG - chr4_2:68466817-68466836 Msa0617770:five_prime_UTR 30.0%
GTATGGAACTCTTAATACTT+TGG - chr4_2:68466834-68466853 Msa0617770:five_prime_UTR 30.0%
!! GTTTGGGTTAAGTTCAGTTT+TGG + chr4_2:68459634-68459653 None:intergenic 35.0%
!!! CTGGGTTTTGTTCAATGTTT+TGG - chr4_2:68459869-68459888 Msa0617770:intron 35.0%
! CTGAAACTGTTGCTTCAAAA+TGG + chr4_2:68460298-68460317 None:intergenic 35.0%
TTGAAGCAACAGTTTCAGTT+TGG - chr4_2:68460300-68460319 Msa0617770:intron 35.0%
GTTTCATTATGGTTCAGTTC+AGG - chr4_2:68460331-68460350 Msa0617770:intron 35.0%
AATCTCGAATGGTAGACTTA+GGG + chr4_2:68460395-68460414 None:intergenic 35.0%
TAATCTCGAATGGTAGACTT+AGG + chr4_2:68460396-68460415 None:intergenic 35.0%
!! CAACTCGTTTTAATCTCGAA+TGG + chr4_2:68460406-68460425 None:intergenic 35.0%
!! GATTTTAGATGGAGCTTGTT+CGG + chr4_2:68460463-68460482 None:intergenic 35.0%
!! GCACGCAATTTGATTTTAGA+TGG + chr4_2:68460474-68460493 None:intergenic 35.0%
ATTATCATAGCGTGTGAAAC+AGG + chr4_2:68460637-68460656 None:intergenic 35.0%
ATGATCGTAATCACGATTCA+CGG + chr4_2:68460674-68460693 None:intergenic 35.0%
TGAATCGTGATTACGATCAT+AGG - chr4_2:68460674-68460693 Msa0617770:intron 35.0%
GGCAAATAAATCTGAGGAAT+AGG + chr4_2:68460737-68460756 None:intergenic 35.0%
! CACTAATTTTCTTGCTTCGT+TGG - chr4_2:68461223-68461242 Msa0617770:intron 35.0%
GTTGAATTGTGTCAAACGTA+GGG + chr4_2:68461288-68461307 None:intergenic 35.0%
AGTTGAATTGTGTCAAACGT+AGG + chr4_2:68461289-68461308 None:intergenic 35.0%
TCCAACTCTCAAACGTATTT+CGG - chr4_2:68461354-68461373 Msa0617770:intron 35.0%
CATTTGCAAAGCAGAATTGA+AGG + chr4_2:68461798-68461817 None:intergenic 35.0%
AGGAAAAACTGATGCTTTGA+AGG - chr4_2:68462213-68462232 Msa0617770:intron 35.0%
!! AAAACTGATGCTTTGAAGGT+TGG - chr4_2:68462217-68462236 Msa0617770:intron 35.0%
CTAAAAGTTTCAACCTCATC+AGG + chr4_2:68462397-68462416 None:intergenic 35.0%
AGAAGGTCACTTAAAAGTTC+CGG + chr4_2:68462486-68462505 None:intergenic 35.0%
AAGTGACCTTCTTACATCAT+AGG - chr4_2:68462494-68462513 Msa0617770:intron 35.0%
GAACAACCTATGATGTAAGA+AGG + chr4_2:68462503-68462522 None:intergenic 35.0%
! GCGATCTAGTGTTTGTTAAA+TGG - chr4_2:68462600-68462619 Msa0617770:intron 35.0%
ATGAAATGAGAGGATTAGGA+TGG + chr4_2:68462731-68462750 None:intergenic 35.0%
ATGCATGAAATGAGAGGATT+AGG + chr4_2:68462735-68462754 None:intergenic 35.0%
ATTGCAATGCATGAAATGAG+AGG + chr4_2:68462741-68462760 None:intergenic 35.0%
TGTAAAGTCACATGATCGAA+GGG + chr4_2:68463116-68463135 None:intergenic 35.0%
ATGTAAAGTCACATGATCGA+AGG + chr4_2:68463117-68463136 None:intergenic 35.0%
! GCAATGTTGGTGAAAGTTAT+GGG + chr4_2:68463320-68463339 None:intergenic 35.0%
! TGCAATGTTGGTGAAAGTTA+TGG + chr4_2:68463321-68463340 None:intergenic 35.0%
CTAGGTTGTTCTCCAAATTA+GGG + chr4_2:68463565-68463584 None:intergenic 35.0%
ACTAGGTTGTTCTCCAAATT+AGG + chr4_2:68463566-68463585 None:intergenic 35.0%
GTCAAACCCAAACCTAATTT+GGG - chr4_2:68463675-68463694 Msa0617770:intron 35.0%
ATCATGAGGGAATATTCAGT+GGG + chr4_2:68463710-68463729 None:intergenic 35.0%
AATCATGAGGGAATATTCAG+TGG + chr4_2:68463711-68463730 None:intergenic 35.0%
ACTGAATATTCCCTCATGAT+TGG - chr4_2:68463710-68463729 Msa0617770:intron 35.0%
CTTATCAGTACCAATCATGA+GGG + chr4_2:68463723-68463742 None:intergenic 35.0%
TCTTATCAGTACCAATCATG+AGG + chr4_2:68463724-68463743 None:intergenic 35.0%
!! GGTACTGATAAGATAAGGTA+CGG - chr4_2:68463731-68463750 Msa0617770:intron 35.0%
TCCATTCAAATAGCCTCTAA+CGG + chr4_2:68463772-68463791 None:intergenic 35.0%
ACATATACAACCAGCTAACT+TGG + chr4_2:68463795-68463814 None:intergenic 35.0%
CCTATACACTTGGCATAATA+AGG + chr4_2:68463857-68463876 None:intergenic 35.0%
CCTTATTATGCCAAGTGTAT+AGG - chr4_2:68463854-68463873 Msa0617770:intron 35.0%
! AATTTAGTACCGAACAAGAG+TGG - chr4_2:68463985-68464004 Msa0617770:intron 35.0%
ATCAGAACTCAAGATAATGC+AGG + chr4_2:68464110-68464129 None:intergenic 35.0%
AAGCAAGCAAAATCAATCCA+AGG - chr4_2:68464193-68464212 Msa0617770:intron 35.0%
AAAGGATAACGCAGCTATTA+TGG - chr4_2:68464259-68464278 Msa0617770:intron 35.0%
AAGGATAACGCAGCTATTAT+GGG - chr4_2:68464260-68464279 Msa0617770:intron 35.0%
CCACATAGGAAGAAAAATTG+AGG + chr4_2:68464370-68464389 None:intergenic 35.0%
! CCTCAATTTTTCTTCCTATG+TGG - chr4_2:68464367-68464386 Msa0617770:CDS 35.0%
GAAGAACAAAATTCCCACAT+AGG + chr4_2:68464384-68464403 None:intergenic 35.0%
GAATATGTTCTACTCCTACA+AGG - chr4_2:68464580-68464599 Msa0617770:CDS 35.0%
GGAAAAAGGACATTTAGTGA+CGG + chr4_2:68464720-68464739 None:intergenic 35.0%
! ACTAAATGTCCTTTTTCCGT+AGG - chr4_2:68464722-68464741 Msa0617770:CDS 35.0%
! AGACTTTTACCTACGGAAAA+AGG + chr4_2:68464734-68464753 None:intergenic 35.0%
GACAAATAGGCATTTACCTA+TGG + chr4_2:68464792-68464811 None:intergenic 35.0%
GTAAATGCCTATTTGTCTGT+GGG - chr4_2:68464795-68464814 Msa0617770:CDS 35.0%
! ACTTTTACCCACAGACAAAT+AGG + chr4_2:68464805-68464824 None:intergenic 35.0%
TCATAAACAGTTCCTTGTCA+GGG + chr4_2:68464904-68464923 None:intergenic 35.0%
GTGTTATCTTACTTAGGATG+GGG + chr4_2:68464983-68465002 None:intergenic 35.0%
GTGTGTTATCTTACTTAGGA+TGG + chr4_2:68464985-68465004 None:intergenic 35.0%
CTAATTCCATTCCATACTGA+AGG - chr4_2:68465017-68465036 Msa0617770:intron 35.0%
AATTGTGTTGTCCTTCAGTA+TGG + chr4_2:68465031-68465050 None:intergenic 35.0%
!! TATCACTGGTTTGAAGTCAT+CGG + chr4_2:68465452-68465471 None:intergenic 35.0%
GATAGAGATGAAGTTATCAC+TGG + chr4_2:68465466-68465485 None:intergenic 35.0%
AGAACTAGATCGATTGGAAA+CGG + chr4_2:68465544-68465563 None:intergenic 35.0%
TCAGAATCACAAGACTGAAA+CGG + chr4_2:68465571-68465590 None:intergenic 35.0%
! GTATCGGATTTTGGATTTTC+TGG - chr4_2:68465655-68465674 Msa0617770:intron 35.0%
!!! GGATTTTCTGGTTTGTGATT+TGG - chr4_2:68465667-68465686 Msa0617770:intron 35.0%
!!! TTTTCTGGTTTGTGATTTGG+TGG - chr4_2:68465670-68465689 Msa0617770:intron 35.0%
CTCCAAATTCCGAATATTTC+CGG + chr4_2:68465708-68465727 None:intergenic 35.0%
!! TGTTGAATCATTTTGATGCG+CGG - chr4_2:68465783-68465802 Msa0617770:intron 35.0%
! AATGGTTTTCCACAGCAAAA+TGG - chr4_2:68465992-68466011 Msa0617770:five_prime_UTR 35.0%
! TTTCCACAGCAAAATGGTTT+TGG - chr4_2:68465998-68466017 Msa0617770:five_prime_UTR 35.0%
GATGATGAGATTGAAGATTC+TGG - chr4_2:68466066-68466085 Msa0617770:five_prime_UTR 35.0%
!! ACTCCAAACCCATTTTTCTA+TGG + chr4_2:68466101-68466120 None:intergenic 35.0%
!! ATTCAGTTTGTTTTCGCGTT+TGG - chr4_2:68466259-68466278 Msa0617770:intron 35.0%
!! TTCAGTTTGTTTTCGCGTTT+GGG - chr4_2:68466260-68466279 Msa0617770:intron 35.0%
GTGTAGGAAGCAATTATGTT+GGG - chr4_2:68466284-68466303 Msa0617770:intron 35.0%
TGAACAATCAACAAGGGAAT+GGG + chr4_2:68466355-68466374 None:intergenic 35.0%
ATGAACAATCAACAAGGGAA+TGG + chr4_2:68466356-68466375 None:intergenic 35.0%
GTGATCATGAACAATCAACA+AGG + chr4_2:68466362-68466381 None:intergenic 35.0%
CAGAATCCAATCTATTTGTG+AGG + chr4_2:68466437-68466456 None:intergenic 35.0%
! AATATGATGGTGTAGTAGAG+TGG - chr4_2:68466519-68466538 Msa0617770:intron 35.0%
!! TGGCTTTATTGCATTTGTGT+AGG - chr4_2:68466700-68466719 Msa0617770:intron 35.0%
TTAATGAGCTTGATGTGTTG+AGG - chr4_2:68466985-68467004 Msa0617770:five_prime_UTR 35.0%
TAATGAGCTTGATGTGTTGA+GGG - chr4_2:68466986-68467005 Msa0617770:five_prime_UTR 35.0%
! GAGGGAATTGGAATTTTCTT+AGG - chr4_2:68467004-68467023 Msa0617770:five_prime_UTR 35.0%
!! CGACAGTTTGGTTCAGTTTT+TGG + chr4_2:68459523-68459542 None:intergenic 40.0%
!!! GATGGATTGGATTTTGGAGA+TGG + chr4_2:68459677-68459696 None:intergenic 40.0%
!!! ATCGGAGATGGATTGGATTT+TGG + chr4_2:68459683-68459702 None:intergenic 40.0%
GAGAATGAAGAGGAGAAAGA+GGG + chr4_2:68459828-68459847 None:intergenic 40.0%
AGAGAATGAAGAGGAGAAAG+AGG + chr4_2:68459829-68459848 None:intergenic 40.0%
AGAAGGAAGAGAGAATGAAG+AGG + chr4_2:68459838-68459857 None:intergenic 40.0%
TTCATTCTCTCTTCCTTCTC+TGG - chr4_2:68459839-68459858 Msa0617770:intron 40.0%
TCATTCTCTCTTCCTTCTCT+GGG - chr4_2:68459840-68459859 Msa0617770:intron 40.0%
! TTCAGGTCAGACACTGTTTT+GGG - chr4_2:68460348-68460367 Msa0617770:intron 40.0%
! TGTTCGGTTTGTATCAACAG+CGG + chr4_2:68460447-68460466 None:intergenic 40.0%
AACCTGAACGGAATTTCTGA+CGG + chr4_2:68460575-68460594 None:intergenic 40.0%
GGAAAACCAACCATCAAGAA+AGG - chr4_2:68461004-68461023 Msa0617770:intron 40.0%
! AAGCTTCCTTTCTTGATGGT+TGG + chr4_2:68461013-68461032 None:intergenic 40.0%
GTCAAAGCTTCCTTTCTTGA+TGG + chr4_2:68461017-68461036 None:intergenic 40.0%
GGCTCATTATGACTCTCATT+TGG - chr4_2:68461375-68461394 Msa0617770:intron 40.0%
GACTCTCATTTGGTTGATCA+TGG - chr4_2:68461385-68461404 Msa0617770:intron 40.0%
TCAAACGCGTATACAGACAT+TGG + chr4_2:68461423-68461442 None:intergenic 40.0%
! AAAATTGCTTGGTAGTCTCC+AGG - chr4_2:68461495-68461514 Msa0617770:intron 40.0%
AGTTAACAGAGAAACGGCAA+TGG - chr4_2:68461601-68461620 Msa0617770:intron 40.0%
AACTCCATTGAGAAAACCCT+GGG - chr4_2:68461740-68461759 Msa0617770:intron 40.0%
AGCAGAATTGAAGGTTGAGA+CGG + chr4_2:68461789-68461808 None:intergenic 40.0%
AAGAGAAATACATGCGTTGG+AGG + chr4_2:68461826-68461845 None:intergenic 40.0%
TCGAAGAGAAATACATGCGT+TGG + chr4_2:68461829-68461848 None:intergenic 40.0%
CTTTAAACCCATGTCCCAAA+TGG - chr4_2:68461881-68461900 Msa0617770:intron 40.0%
GCTTGACAACATGGTCAAAT+TGG - chr4_2:68461949-68461968 Msa0617770:intron 40.0%
! GGCAGAAAAGTGTAACATTC+AGG - chr4_2:68461970-68461989 Msa0617770:intron 40.0%
ACTCACTTAACAACCTCCAT+GGG + chr4_2:68461998-68462017 None:intergenic 40.0%
TACTCACTTAACAACCTCCA+TGG + chr4_2:68461999-68462018 None:intergenic 40.0%
TATGTTTCTTTGCGGCTCTA+TGG - chr4_2:68462072-68462091 Msa0617770:intron 40.0%
! TTAGTATTTCTGTTTGGGGC+AGG - chr4_2:68462330-68462349 Msa0617770:intron 40.0%
!! CAAGCATCTTTTGGAGGAAT+TGG - chr4_2:68462360-68462379 Msa0617770:intron 40.0%
TGCTGTAAGCGTTACTTGTT+TGG - chr4_2:68462438-68462457 Msa0617770:intron 40.0%
GAAGGTCACTTAAAAGTTCC+GGG + chr4_2:68462485-68462504 None:intergenic 40.0%
GAATTATGTCTGCTTCACCT+AGG - chr4_2:68462555-68462574 Msa0617770:intron 40.0%
!! TCGTCAACTGCCTTATTTGT+TGG - chr4_2:68462655-68462674 Msa0617770:intron 40.0%
! TTATGATGAGAAGTACGCAG+TGG + chr4_2:68462818-68462837 None:intergenic 40.0%
ACAAAGGTTTGCAGTTGTCA+AGG + chr4_2:68462939-68462958 None:intergenic 40.0%
!! CTTCTAGTTCTCCACTTTGA+AGG + chr4_2:68462996-68463015 None:intergenic 40.0%
GTAAAGTCACATGATCGAAG+GGG + chr4_2:68463115-68463134 None:intergenic 40.0%
GAAATGGGGATTGCAAAAGT+AGG + chr4_2:68463146-68463165 None:intergenic 40.0%
CCATAAAACTTGTCTCAGAG+CGG + chr4_2:68463168-68463187 None:intergenic 40.0%
!! ACAAGTTTTATGGCAACCAG+TGG - chr4_2:68463175-68463194 Msa0617770:intron 40.0%
AACAAGAACACAGAAGGCAA+AGG + chr4_2:68463468-68463487 None:intergenic 40.0%
GGAGAACAACCTAGTATGTT+TGG - chr4_2:68463571-68463590 Msa0617770:intron 40.0%
GACACAACTCCAAACATACT+AGG + chr4_2:68463583-68463602 None:intergenic 40.0%
GCATAGAAAAGGCTAAAAGG+AGG + chr4_2:68463624-68463643 None:intergenic 40.0%
GAGGCATAGAAAAGGCTAAA+AGG + chr4_2:68463627-68463646 None:intergenic 40.0%
! TAGACAAGGAGGCATAGAAA+AGG + chr4_2:68463635-68463654 None:intergenic 40.0%
! TTTTCTATGCCTCCTTGTCT+AGG - chr4_2:68463634-68463653 Msa0617770:intron 40.0%
TTTCTATGCCTCCTTGTCTA+GGG - chr4_2:68463635-68463654 Msa0617770:intron 40.0%
! TTAGGTTTGGGTTTGACGAA+AGG + chr4_2:68463672-68463691 None:intergenic 40.0%
CGTCAAACCCAAACCTAATT+TGG - chr4_2:68463674-68463693 Msa0617770:intron 40.0%
TCATGAGGGAATATTCAGTG+GGG + chr4_2:68463709-68463728 None:intergenic 40.0%
ACTGATAAGATAAGGTACGG+AGG - chr4_2:68463734-68463753 Msa0617770:intron 40.0%
ATAAGATAAGGTACGGAGGA+AGG - chr4_2:68463738-68463757 Msa0617770:intron 40.0%
ACCGTTAGAGGCTATTTGAA+TGG - chr4_2:68463768-68463787 Msa0617770:intron 40.0%
TTTGAATGGACCAAGTTAGC+TGG - chr4_2:68463782-68463801 Msa0617770:intron 40.0%
TCCCATAAGAGATATGAGCT+CGG - chr4_2:68463947-68463966 Msa0617770:intron 40.0%
ACCGAGCTCATATCTCTTAT+GGG + chr4_2:68463951-68463970 None:intergenic 40.0%
AACCGAGCTCATATCTCTTA+TGG + chr4_2:68463952-68463971 None:intergenic 40.0%
AACCATCAACCACTCTTGTT+CGG + chr4_2:68463997-68464016 None:intergenic 40.0%
ATCAGTACGAGAAGCTTTCA+AGG + chr4_2:68464066-68464085 None:intergenic 40.0%
CTTCTTTCCTTGACTGATCA+TGG - chr4_2:68464166-68464185 Msa0617770:CDS 40.0%
CTTGATTCCATGATCAGTCA+AGG + chr4_2:68464176-68464195 None:intergenic 40.0%
AGGATAACGCAGCTATTATG+GGG - chr4_2:68464261-68464280 Msa0617770:intron 40.0%
! ATTGAGTAGAAAAGTGTGGG+AGG + chr4_2:68464295-68464314 None:intergenic 40.0%
GTAAATTCCTCCTATCCATG+TGG - chr4_2:68464409-68464428 Msa0617770:intron 40.0%
CATAATACCACATGGATAGG+AGG + chr4_2:68464419-68464438 None:intergenic 40.0%
CTCCTATCCATGTGGTATTA+TGG - chr4_2:68464417-68464436 Msa0617770:intron 40.0%
CACCATAATACCACATGGAT+AGG + chr4_2:68464422-68464441 None:intergenic 40.0%
! TAGTTTGCCATGCAGAACAA+GGG + chr4_2:68464456-68464475 None:intergenic 40.0%
CATGGCAAACTAGTTCACTT+TGG - chr4_2:68464464-68464483 Msa0617770:intron 40.0%
TTCTACTCCTACAAGGAACA+GGG - chr4_2:68464587-68464606 Msa0617770:CDS 40.0%
!!! GGACATTTAGTGACGGATTT+TGG + chr4_2:68464713-68464732 None:intergenic 40.0%
GGTAAATGCCTATTTGTCTG+TGG - chr4_2:68464794-68464813 Msa0617770:CDS 40.0%
CTCATAAACAGTTCCTTGTC+AGG + chr4_2:68464905-68464924 None:intergenic 40.0%
TCACAGATCCTGCATGTTAT+AGG + chr4_2:68464955-68464974 None:intergenic 40.0%
TTATCTTACTTAGGATGGGG+AGG + chr4_2:68464980-68464999 None:intergenic 40.0%
TGTTGTCCTTCAGTATGGAA+TGG + chr4_2:68465026-68465045 None:intergenic 40.0%
!! TTTTCAGGGAGAAATTCCCT+TGG - chr4_2:68465201-68465220 Msa0617770:intron 40.0%
TTTCAGGGAGAAATTCCCTT+GGG - chr4_2:68465202-68465221 Msa0617770:intron 40.0%
ATTCCCTTGGGCAAAAGTTA+TGG - chr4_2:68465214-68465233 Msa0617770:intron 40.0%
ATGCATGGTGCATATGGAAA+TGG + chr4_2:68465248-68465267 None:intergenic 40.0%
TTCCATATGCACCATGCATA+AGG - chr4_2:68465249-68465268 Msa0617770:intron 40.0%
GATTGTGGGATCAAATCTCA+TGG + chr4_2:68465284-68465303 None:intergenic 40.0%
GAGTCAGAGATGAGAAGATT+CGG + chr4_2:68465336-68465355 None:intergenic 40.0%
!! GTGAATGAGGAAAAGTGCTT+CGG + chr4_2:68465373-68465392 None:intergenic 40.0%
GAAGTCATCGGAAAAATCAC+CGG + chr4_2:68465440-68465459 None:intergenic 40.0%
GTGAAGAGGATTGCTACATT+GGG + chr4_2:68465518-68465537 None:intergenic 40.0%
GGAACAAGAACTAGATCGAT+TGG + chr4_2:68465550-68465569 None:intergenic 40.0%
CATGTTGTAGAAGGATTCTG+AGG - chr4_2:68465630-68465649 Msa0617770:intron 40.0%
! GAAGGATTCTGAGGATGTAT+CGG - chr4_2:68465639-68465658 Msa0617770:intron 40.0%
! TCTGAGGATGTATCGGATTT+TGG - chr4_2:68465646-68465665 Msa0617770:intron 40.0%
AGAACGTTGCCGGAAATATT+CGG - chr4_2:68465696-68465715 Msa0617770:intron 40.0%
TGCCGGAAATATTCGGAATT+TGG - chr4_2:68465703-68465722 Msa0617770:intron 40.0%
CGGAAATATTCGGAATTTGG+AGG - chr4_2:68465706-68465725 Msa0617770:intron 40.0%
TATTCGGAATTTGGAGGAGA+AGG - chr4_2:68465712-68465731 Msa0617770:intron 40.0%
CTTCCGAAACTTCTTCTGTT+TGG + chr4_2:68465762-68465781 None:intergenic 40.0%
CGTTGAACAAACGCTTGAAT+CGG - chr4_2:68465840-68465859 Msa0617770:intron 40.0%
CTTGAATCGGAAAGAATGTG+AGG - chr4_2:68465853-68465872 Msa0617770:intron 40.0%
! TGGTTTTCTTTGATCCAGCA+GGG + chr4_2:68465917-68465936 None:intergenic 40.0%
! ATGGTTTTCTTTGATCCAGC+AGG + chr4_2:68465918-68465937 None:intergenic 40.0%
!!! TGGTTTTGGAGTACAACTAC+TGG - chr4_2:68465951-68465970 Msa0617770:five_prime_UTR 40.0%
! ATGCCAAAACCATTTTGCTG+TGG + chr4_2:68466004-68466023 None:intergenic 40.0%
!!! GCAAAATGGTTTTGGCATTC+CGG - chr4_2:68466006-68466025 Msa0617770:five_prime_UTR 40.0%
!!! ATGGTTTTGACATTCCGGTA+CGG - chr4_2:68466151-68466170 Msa0617770:five_prime_UTR 40.0%
GATGAGATTGAAGATTCCAG+TGG - chr4_2:68466212-68466231 Msa0617770:five_prime_UTR 40.0%
!! TCAGTTTGTTTTCGCGTTTG+GGG - chr4_2:68466261-68466280 Msa0617770:intron 40.0%
GGTGTAGGAAGCAATTATGT+TGG - chr4_2:68466283-68466302 Msa0617770:intron 40.0%
TGTGTAGGAGTTGAAACGTT+TGG - chr4_2:68466715-68466734 Msa0617770:intron 40.0%
! TCTCCATTTGGTAGTACACT+TGG + chr4_2:68466749-68466768 None:intergenic 40.0%
TACTACCAAATGGAGATGCA+AGG - chr4_2:68466753-68466772 Msa0617770:five_prime_UTR 40.0%
ACTACCAAATGGAGATGCAA+GGG - chr4_2:68466754-68466773 Msa0617770:five_prime_UTR 40.0%
CTAGGAGAGTTGCAACAATA+AGG + chr4_2:68466899-68466918 None:intergenic 40.0%
! TTCAGTTCGGTTCGACAGTT+TGG + chr4_2:68459535-68459554 None:intergenic 45.0%
AATAGGAGATGGTGAGGTGA+CGG + chr4_2:68459752-68459771 None:intergenic 45.0%
AAAAGCTGCGCAATAGGAGA+TGG + chr4_2:68459763-68459782 None:intergenic 45.0%
! TCCTATTGCGCAGCTTTTGA+AGG - chr4_2:68459765-68459784 Msa0617770:CDS 45.0%
ACCTTCAAAAGCTGCGCAAT+AGG + chr4_2:68459769-68459788 None:intergenic 45.0%
! GAAGAGGAGAAAGAGGGTAT+CGG + chr4_2:68459822-68459841 None:intergenic 45.0%
TTCCTTCTCTGGGTTTCATC+TGG - chr4_2:68459850-68459869 Msa0617770:intron 45.0%
TCCTTCTCTGGGTTTCATCT+GGG - chr4_2:68459851-68459870 Msa0617770:intron 45.0%
! GTTCAGGTCAGACACTGTTT+TGG - chr4_2:68460347-68460366 Msa0617770:intron 45.0%
CGAATGGTAGACTTAGGGAT+GGG + chr4_2:68460390-68460409 None:intergenic 45.0%
TCGAATGGTAGACTTAGGGA+TGG + chr4_2:68460391-68460410 None:intergenic 45.0%
! GTTCGGTTTGTATCAACAGC+GGG + chr4_2:68460446-68460465 None:intergenic 45.0%
ATAGCGTGTGAAACAGGAGA+AGG + chr4_2:68460631-68460650 None:intergenic 45.0%
GTTGGATCACGTACAACGAA+GGG + chr4_2:68461340-68461359 None:intergenic 45.0%
AGTTGGATCACGTACAACGA+AGG + chr4_2:68461341-68461360 None:intergenic 45.0%
GCCGAAATACGTTTGAGAGT+TGG + chr4_2:68461358-68461377 None:intergenic 45.0%
TCATCACAAAATCCAGCTGC+AGG - chr4_2:68461626-68461645 Msa0617770:intron 45.0%
AATGGGACGCTGATATCTCA+CGG - chr4_2:68461653-68461672 Msa0617770:intron 45.0%
TCTCAATGGAGTTGCTGATC+TGG + chr4_2:68461733-68461752 None:intergenic 45.0%
CAACTCCATTGAGAAAACCC+TGG - chr4_2:68461739-68461758 Msa0617770:intron 45.0%
ATTGAAGGTTGAGACGGTGA+GGG + chr4_2:68461783-68461802 None:intergenic 45.0%
AATTGAAGGTTGAGACGGTG+AGG + chr4_2:68461784-68461803 None:intergenic 45.0%
AAATACATGCGTTGGAGGAG+TGG + chr4_2:68461821-68461840 None:intergenic 45.0%
!! TTCCAGCAATGGTCTTGTTG+CGG - chr4_2:68461925-68461944 Msa0617770:intron 45.0%
! GTGTAACATTCAGGTTCCCA+TGG - chr4_2:68461979-68461998 Msa0617770:intron 45.0%
! TAACATTCAGGTTCCCATGG+AGG - chr4_2:68461982-68462001 Msa0617770:intron 45.0%
! GGATTTGCGCAAGCATCTTT+TGG - chr4_2:68462351-68462370 Msa0617770:intron 45.0%
! TTTGCGCAAGCATCTTTTGG+AGG - chr4_2:68462354-68462373 Msa0617770:intron 45.0%
TGTCTGCTTCACCTAGGAAA+AGG - chr4_2:68462561-68462580 Msa0617770:intron 45.0%
TTTGTTAAATGGCGCCACCA+TGG - chr4_2:68462611-68462630 Msa0617770:intron 45.0%
ATGAGAGGATTAGGATGGAG+AGG + chr4_2:68462726-68462745 None:intergenic 45.0%
AGCTGATCGGTGAGAAATCT+AGG + chr4_2:68462779-68462798 None:intergenic 45.0%
GAGAGCAAAGTAGAGCTGAT+CGG + chr4_2:68462792-68462811 None:intergenic 45.0%
GGTTGTCTTCACCTTCAAAG+TGG - chr4_2:68462982-68463001 Msa0617770:intron 45.0%
ACTTGTCTCAGAGCGGAAAT+GGG + chr4_2:68463161-68463180 None:intergenic 45.0%
AACTTGTCTCAGAGCGGAAA+TGG + chr4_2:68463162-68463181 None:intergenic 45.0%
!!! CCGCTCTGAGACAAGTTTTA+TGG - chr4_2:68463165-68463184 Msa0617770:intron 45.0%
!! GTGAAAGTTATGGGCTAGAC+AGG + chr4_2:68463311-68463330 None:intergenic 45.0%
!! AGGTTGGTGATGCCCTAATT+TGG - chr4_2:68463550-68463569 Msa0617770:intron 45.0%
AAAAGGAGGAGAGAGAAAGG+TGG + chr4_2:68463610-68463629 None:intergenic 45.0%
GCTAAAAGGAGGAGAGAGAA+AGG + chr4_2:68463613-68463632 None:intergenic 45.0%
TTGGGTTTGACGAAAGGAGA+GGG + chr4_2:68463666-68463685 None:intergenic 45.0%
! TTTGGGTTTGACGAAAGGAG+AGG + chr4_2:68463667-68463686 None:intergenic 45.0%
CGTGCACCCAAATTAGGTTT+GGG + chr4_2:68463684-68463703 None:intergenic 45.0%
CCAAACCTAATTTGGGTGCA+CGG - chr4_2:68463682-68463701 Msa0617770:intron 45.0%
GAAGGACATTTGACCGTTAG+AGG - chr4_2:68463756-68463775 Msa0617770:intron 45.0%
AAAGGATAGCAGAGCAAGCA+AGG + chr4_2:68463899-68463918 None:intergenic 45.0%
GAGATATGAGCTCGGTTGTA+TGG - chr4_2:68463955-68463974 Msa0617770:intron 45.0%
TACCGAACAAGAGTGGTTGA+TGG - chr4_2:68463992-68464011 Msa0617770:intron 45.0%
AAAGTAGAGAGAGGAAAGGC+AGG + chr4_2:68464323-68464342 None:intergenic 45.0%
! TGAGGCACCATAATACCACA+TGG + chr4_2:68464427-68464446 None:intergenic 45.0%
! CTAGTTTGCCATGCAGAACA+AGG + chr4_2:68464457-68464476 None:intergenic 45.0%
GTTCTACTCCTACAAGGAAC+AGG - chr4_2:68464586-68464605 Msa0617770:CDS 45.0%
CACAGGGCCTAAAACTTAGA+GGG - chr4_2:68464642-68464661 Msa0617770:intron 45.0%
ACAGGGCCTAAAACTTAGAG+GGG - chr4_2:68464643-68464662 Msa0617770:intron 45.0%
! TTGAGGCCCCTCTAAGTTTT+AGG + chr4_2:68464652-68464671 None:intergenic 45.0%
CTTAGAGGGGCCTCAAAATT+TGG - chr4_2:68464656-68464675 Msa0617770:intron 45.0%
! GCACCATAACTTTTGCCCAA+GGG + chr4_2:68465220-68465239 None:intergenic 45.0%
! TGCACCATAACTTTTGCCCA+AGG + chr4_2:68465221-68465240 None:intergenic 45.0%
GTCCTTATGCATGGTGCATA+TGG + chr4_2:68465254-68465273 None:intergenic 45.0%
GGTTGTGAAGTCCTTATGCA+TGG + chr4_2:68465263-68465282 None:intergenic 45.0%
GCAAGTCTCGATCAGATTGT+GGG + chr4_2:68465298-68465317 None:intergenic 45.0%
AGCAAGTCTCGATCAGATTG+TGG + chr4_2:68465299-68465318 None:intergenic 45.0%
AAGTGCTTCGGATCTGATGA+TGG + chr4_2:68465361-68465380 None:intergenic 45.0%
!! AAATCACCGGAGTTTGTTGC+CGG + chr4_2:68465427-68465446 None:intergenic 45.0%
AAGAGGATTGCTACATTGGG+AGG + chr4_2:68465515-68465534 None:intergenic 45.0%
CGTGAAGAGGATTGCTACAT+TGG + chr4_2:68465519-68465538 None:intergenic 45.0%
ATTGGAAACGGAACGTGAAG+AGG + chr4_2:68465532-68465551 None:intergenic 45.0%
CGAGTGGAACATGTTGTAGA+AGG - chr4_2:68465621-68465640 Msa0617770:intron 45.0%
!! GAATCATTTTGATGCGCGGT+TGG - chr4_2:68465787-68465806 Msa0617770:intron 45.0%
AGAATGTGAGGAAGCTTCAC+CGG - chr4_2:68465865-68465884 Msa0617770:intron 45.0%
! GAAGCTTCACCGGAATTTTC+CGG - chr4_2:68465875-68465894 Msa0617770:intron 45.0%
ACGTGTTTCATAAACCCTGC+TGG - chr4_2:68465900-68465919 Msa0617770:intron 45.0%
!!! ATGGTTTTGGCATTCCGGTA+CGG - chr4_2:68466011-68466030 Msa0617770:five_prime_UTR 45.0%
! ACGGTGATGATGATGAACGA+CGG - chr4_2:68466039-68466058 Msa0617770:five_prime_UTR 45.0%
TCGTTCATCATCATCACCAC+TGG + chr4_2:68466231-68466250 None:intergenic 45.0%
! GTGGTGATGATGATGAACGA+CGG - chr4_2:68466231-68466250 Msa0617770:five_prime_UTR 45.0%
!! CAGTTTGTTTTCGCGTTTGG+GGG - chr4_2:68466262-68466281 Msa0617770:intron 45.0%
GGATTTATGCACGGTGCATA+AGG - chr4_2:68466305-68466324 Msa0617770:intron 45.0%
GGGAGTGGTTATGATGCATA+AGG + chr4_2:68466335-68466354 None:intergenic 45.0%
AATCAACAAGGGAATGGGAG+TGG + chr4_2:68466350-68466369 None:intergenic 45.0%
CACTGTCAGGTAAGGAAATC+TGG + chr4_2:68466482-68466501 None:intergenic 45.0%
CAGATTTCCTTACCTGACAG+TGG - chr4_2:68466480-68466499 Msa0617770:intron 45.0%
ATTTCCTTACCTGACAGTGG+TGG - chr4_2:68466483-68466502 Msa0617770:intron 45.0%
! ATGATGGTGTAGTAGAGTGG+TGG - chr4_2:68466522-68466541 Msa0617770:intron 45.0%
! TGATGGTGTAGTAGAGTGGT+GGG - chr4_2:68466523-68466542 Msa0617770:intron 45.0%
GCACCAAGTGTACTACCAAA+TGG - chr4_2:68466743-68466762 Msa0617770:intron 45.0%
TTAGCCCTTGCATCTCCATT+TGG + chr4_2:68466761-68466780 None:intergenic 45.0%
GCTTGATGTGTTGAGGGAAT+TGG - chr4_2:68466992-68467011 Msa0617770:five_prime_UTR 45.0%
!!! ATTTTTTTATTAGAAAAATT+TGG - chr4_2:68461152-68461171 Msa0617770:intron 5.0%
!! TTATTAAAAATTATATATGA+GGG + chr4_2:68463379-68463398 None:intergenic 5.0%
!! AAGGGGTGTTGAGGAAGAAG+AGG + chr4_2:68459794-68459813 None:intergenic 50.0%
TCTTCCTCAACACCCCTTTC+TGG - chr4_2:68459796-68459815 Msa0617770:CDS 50.0%
!! AAGAGGGTATCGGCCAGAAA+GGG + chr4_2:68459812-68459831 None:intergenic 50.0%
!! AAAGAGGGTATCGGCCAGAA+AGG + chr4_2:68459813-68459832 None:intergenic 50.0%
ACCCAGATGAAACCCAGAGA+AGG + chr4_2:68459855-68459874 None:intergenic 50.0%
TCAATTCCGTCTGCGTTTCC+CGG + chr4_2:68460545-68460564 None:intergenic 50.0%
ACGCAGACGGAATTGATCGT+CGG - chr4_2:68460549-68460568 Msa0617770:intron 50.0%
GAGTGCTAGGGTTTGAGTGT+CGG + chr4_2:68461256-68461275 None:intergenic 50.0%
TCAAACCCTAGCACTCAAGC+CGG - chr4_2:68461260-68461279 Msa0617770:intron 50.0%
TTGTGTCAAACGTAGGGTGC+CGG + chr4_2:68461282-68461301 None:intergenic 50.0%
TCACAAAATCCAGCTGCAGG+TGG - chr4_2:68461629-68461648 Msa0617770:intron 50.0%
AATCCAGCTGCAGGTGGAAA+TGG - chr4_2:68461635-68461654 Msa0617770:intron 50.0%
ATCCAGCTGCAGGTGGAAAT+GGG - chr4_2:68461636-68461655 Msa0617770:intron 50.0%
GATACAGCAGCTTCTGCATC+AGG - chr4_2:68461680-68461699 Msa0617770:intron 50.0%
TGGAGTTGCTGATCTGGCTA+AGG + chr4_2:68461727-68461746 None:intergenic 50.0%
TGTTGCGGAGCTTGACAACA+TGG - chr4_2:68461940-68461959 Msa0617770:intron 50.0%
GTTTCTTTGCGGCTCTATGG+AGG - chr4_2:68462075-68462094 Msa0617770:intron 50.0%
TCACCTAGGAAAAGGACGTG+AGG - chr4_2:68462569-68462588 Msa0617770:intron 50.0%
CACCTAGGAAAAGGACGTGA+GGG - chr4_2:68462570-68462589 Msa0617770:intron 50.0%
ACCTAGGAAAAGGACGTGAG+GGG - chr4_2:68462571-68462590 Msa0617770:intron 50.0%
! CAGACCAGTGTTGTTGCTGA+CGG + chr4_2:68462693-68462712 None:intergenic 50.0%
! GATGAGAAGTACGCAGTGGA+GGG + chr4_2:68462814-68462833 None:intergenic 50.0%
! TGATGAGAAGTACGCAGTGG+AGG + chr4_2:68462815-68462834 None:intergenic 50.0%
CTTGTCTCAGAGCGGAAATG+GGG + chr4_2:68463160-68463179 None:intergenic 50.0%
CATGTACTGCAATGCACCAC+TGG + chr4_2:68463194-68463213 None:intergenic 50.0%
TAGGTCACTGTCTCCGTTCA+AGG - chr4_2:68463530-68463549 Msa0617770:intron 50.0%
TCACTGTCTCCGTTCAAGGT+TGG - chr4_2:68463534-68463553 Msa0617770:intron 50.0%
! AGGGCATCACCAACCTTGAA+CGG + chr4_2:68463546-68463565 None:intergenic 50.0%
! TATGCCTCCTTGTCTAGGGT+TGG - chr4_2:68463639-68463658 Msa0617770:intron 50.0%
! ATGCCTCCTTGTCTAGGGTT+GGG - chr4_2:68463640-68463659 Msa0617770:intron 50.0%
CCGTGCACCCAAATTAGGTT+TGG + chr4_2:68463685-68463704 None:intergenic 50.0%
ATGACGTCCCTTGTTCTGCA+TGG - chr4_2:68464446-68464465 Msa0617770:intron 50.0%
!!! AGTTTTAGGCCCTGTGCCAA+GGG + chr4_2:68464638-68464657 None:intergenic 50.0%
!!! AAGTTTTAGGCCCTGTGCCA+AGG + chr4_2:68464639-68464658 None:intergenic 50.0%
GCACAGGGCCTAAAACTTAG+AGG - chr4_2:68464641-68464660 Msa0617770:intron 50.0%
!!! TAGTGACGGATTTTGGCCGT+AGG + chr4_2:68464706-68464725 None:intergenic 50.0%
!! TGCTTCGGATCTGATGATGG+TGG + chr4_2:68465358-68465377 None:intergenic 50.0%
GAAAGACGAGGAGGTGAATG+AGG + chr4_2:68465386-68465405 None:intergenic 50.0%
! TTGGTGGTTGAGAACGTTGC+CGG - chr4_2:68465686-68465705 Msa0617770:intron 50.0%
TCGGAATTTGGAGGAGAAGG+AGG - chr4_2:68465715-68465734 Msa0617770:intron 50.0%
GAATTTGGAGGAGAAGGAGG+AGG - chr4_2:68465718-68465737 Msa0617770:intron 50.0%
GCGGTTGGAATGAACCAGTT+CGG - chr4_2:68465802-68465821 Msa0617770:intron 50.0%
CAGTTCGGAAACTCGCTTCT+CGG - chr4_2:68465817-68465836 Msa0617770:intron 50.0%
AACACGTCGCCGGAAAATTC+CGG + chr4_2:68465887-68465906 None:intergenic 50.0%
GGGTTTATGAAACACGTCGC+CGG + chr4_2:68465897-68465916 None:intergenic 50.0%
! TTCCGGTACGGTGATGATGA+CGG - chr4_2:68466163-68466182 Msa0617770:five_prime_UTR 50.0%
AACACCACCACTGTCAGGTA+AGG + chr4_2:68466490-68466509 None:intergenic 50.0%
! TACCTGACAGTGGTGGTGTT+TGG - chr4_2:68466490-68466509 Msa0617770:intron 50.0%
AACCAAACACCACCACTGTC+AGG + chr4_2:68466495-68466514 None:intergenic 50.0%
GATGGTGTAGTAGAGTGGTG+GGG - chr4_2:68466524-68466543 Msa0617770:intron 50.0%
ATGGTGTAGTAGAGTGGTGG+GGG - chr4_2:68466525-68466544 Msa0617770:intron 50.0%
TGCGGAGATCGGAGATGGAT+TGG + chr4_2:68459690-68459709 None:intergenic 55.0%
CTGCGCAATAGGAGATGGTG+AGG + chr4_2:68459758-68459777 None:intergenic 55.0%
!! AGAGGGTATCGGCCAGAAAG+GGG + chr4_2:68459811-68459830 None:intergenic 55.0%
GAACTCAGAGCTCATCTCGC+CGG - chr4_2:68460523-68460542 Msa0617770:intron 55.0%
AACTCAGAGCTCATCTCGCC+GGG - chr4_2:68460524-68460543 Msa0617770:intron 55.0%
GGCCGTCAGAAATTCCGTTC+AGG - chr4_2:68460570-68460589 Msa0617770:intron 55.0%
GGATCACGTACAACGAAGGG+AGG + chr4_2:68461337-68461356 None:intergenic 55.0%
! GAGGCCCAGGGTTTTCTCAA+TGG + chr4_2:68461747-68461766 None:intergenic 55.0%
! TGAGGGAGAGCTGATGGATG+AGG + chr4_2:68461766-68461785 None:intergenic 55.0%
CTCCGCAACAAGACCATTGC+TGG + chr4_2:68461930-68461949 None:intergenic 55.0%
GGAGCAGAACTTCCCTGATG+AGG - chr4_2:68462381-68462400 Msa0617770:intron 55.0%
! ACCCCTCACGTCCTTTTCCT+AGG + chr4_2:68462575-68462594 None:intergenic 55.0%
TAGGAAAAGGACGTGAGGGG+TGG - chr4_2:68462574-68462593 Msa0617770:intron 55.0%
AGGAAAAGGACGTGAGGGGT+GGG - chr4_2:68462575-68462594 Msa0617770:intron 55.0%
GTTAAATGGCGCCACCATGG+AGG - chr4_2:68462614-68462633 Msa0617770:intron 55.0%
ACCATGCCATTCCTCCATGG+TGG + chr4_2:68462628-68462647 None:intergenic 55.0%
ACCATGGAGGAATGGCATGG+TGG - chr4_2:68462627-68462646 Msa0617770:intron 55.0%
TCCACCATGCCATTCCTCCA+TGG + chr4_2:68462631-68462650 None:intergenic 55.0%
! CCAGTGTTGTTGCTGACGGA+AGG + chr4_2:68462689-68462708 None:intergenic 55.0%
CCTTCCGTCAGCAACAACAC+TGG - chr4_2:68462686-68462705 Msa0617770:intron 55.0%
GCAGAACAAGGGACGTCATG+AGG + chr4_2:68464445-68464464 None:intergenic 55.0%
ACTCCTACAAGGAACAGGGC+CGG - chr4_2:68464591-68464610 Msa0617770:intron 55.0%
TTGATGCACTTGCACAGGGC+CGG + chr4_2:68464613-68464632 None:intergenic 55.0%
GGCCTTGATGCACTTGCACA+GGG + chr4_2:68464617-68464636 None:intergenic 55.0%
TGCAAGTGCATCAAGGCCCT+TGG - chr4_2:68464619-68464638 Msa0617770:intron 55.0%
TAACGGGGCCTCCGAATTGT+CGG - chr4_2:68464872-68464891 Msa0617770:CDS 55.0%
ACCTCCTCGTCTTTCCTCAC+CGG - chr4_2:68465391-68465410 Msa0617770:intron 55.0%
CGAGAAGCGAGTTTCCGAAC+TGG + chr4_2:68465819-68465838 None:intergenic 55.0%
GCATTCCGGTACGGTGATGA+CGG - chr4_2:68466020-68466039 Msa0617770:five_prime_UTR 55.0%
CATCACCGTCATCACCGTAC+CGG + chr4_2:68466028-68466047 None:intergenic 55.0%
CACCGTCATCATCACCGTAC+CGG + chr4_2:68466168-68466187 None:intergenic 55.0%
!! GTTTTCGCGTTTGGGGGTGT+AGG - chr4_2:68466268-68466287 Msa0617770:intron 55.0%
CACTGCTATGCCAGTCCTCA+CGG - chr4_2:68466379-68466398 Msa0617770:intron 55.0%
CAATGCGGAAATGCACCGTG+AGG + chr4_2:68466397-68466416 None:intergenic 55.0%
GCTGTTGCGAGACCGGAGAT+GGG + chr4_2:68459728-68459747 None:intergenic 60.0%
AGCTGTTGCGAGACCGGAGA+TGG + chr4_2:68459729-68459748 None:intergenic 60.0%
TGACGGAGCTGTTGCGAGAC+CGG + chr4_2:68459735-68459754 None:intergenic 60.0%
!! TCGGCCAGAAAGGGGTGTTG+AGG + chr4_2:68459803-68459822 None:intergenic 60.0%
ATCTCGCCGGGAAACGCAGA+CGG - chr4_2:68460536-68460555 Msa0617770:intron 60.0%
ACTCGCGCATCTACGCGCTA+GGG - chr4_2:68461037-68461056 Msa0617770:intron 60.0%
GTCCCATTTCCACCTGCAGC+TGG + chr4_2:68461641-68461660 None:intergenic 60.0%
! GAGCTGATGGATGAGGCCCA+GGG + chr4_2:68461759-68461778 None:intergenic 60.0%
! AGAGCTGATGGATGAGGCCC+AGG + chr4_2:68461760-68461779 None:intergenic 60.0%
AGACGGTGAGGGAGAGCTGA+TGG + chr4_2:68461772-68461791 None:intergenic 60.0%
GGAAAAGGACGTGAGGGGTG+GGG - chr4_2:68462576-68462595 Msa0617770:intron 60.0%
GAAAAGGACGTGAGGGGTGG+GGG - chr4_2:68462577-68462596 Msa0617770:intron 60.0%
AAAAGGACGTGAGGGGTGGG+GGG - chr4_2:68462578-68462597 Msa0617770:intron 60.0%
ATGGCGCCACCATGGAGGAA+TGG - chr4_2:68462619-68462638 Msa0617770:intron 60.0%
GCCACCATGGAGGAATGGCA+TGG - chr4_2:68462624-68462643 Msa0617770:intron 60.0%
AGAGGGCCCAACCCTAGACA+AGG + chr4_2:68463649-68463668 None:intergenic 60.0%
GGGGACCGTGCACCCAAATT+AGG + chr4_2:68463690-68463709 None:intergenic 60.0%
GGCCCTGTGCAAGTGCATCA+AGG - chr4_2:68464612-68464631 Msa0617770:intron 60.0%
GGGCCTTGATGCACTTGCAC+AGG + chr4_2:68464618-68464637 None:intergenic 60.0%
TGCATCAAGGCCCTTGGCAC+AGG - chr4_2:68464625-68464644 Msa0617770:intron 60.0%
GCATCAAGGCCCTTGGCACA+GGG - chr4_2:68464626-68464645 Msa0617770:intron 60.0%
AACGGGGCCTCCGAATTGTC+GGG - chr4_2:68464873-68464892 Msa0617770:CDS 60.0%
TCCGGTGAGGAAAGACGAGG+AGG + chr4_2:68465395-68465414 None:intergenic 60.0%
GGTTCCGGTGAGGAAAGACG+AGG + chr4_2:68465398-68465417 None:intergenic 60.0%
TCACCGCCGGCAACAAACTC+CGG - chr4_2:68465418-68465437 Msa0617770:intron 60.0%
!! TCACCGGAGTTTGTTGCCGG+CGG + chr4_2:68465424-68465443 None:intergenic 60.0%
CGGAAATGCACCGTGAGGAC+TGG + chr4_2:68466392-68466411 None:intergenic 60.0%
! GAGTGGTGGGGGAGAGAAAG+CGG - chr4_2:68466536-68466555 Msa0617770:intron 60.0%
! AGTGGTGGGGGAGAGAAAGC+GGG - chr4_2:68466537-68466556 Msa0617770:intron 60.0%
CCTGCTGCGGAGATCGGAGA+TGG + chr4_2:68459695-68459714 None:intergenic 65.0%
CCATCTCCGATCTCCGCAGC+AGG - chr4_2:68459692-68459711 Msa0617770:three_prime_UTR 65.0%
GACGGACCTGCTGCGGAGAT+CGG + chr4_2:68459701-68459720 None:intergenic 65.0%
AGACCGGAGATGGGTCGCGA+CGG + chr4_2:68459719-68459738 None:intergenic 65.0%
CACTCGCGCATCTACGCGCT+AGG - chr4_2:68461036-68461055 Msa0617770:intron 65.0%
!! GGGTGCCGGCTTGAGTGCTA+GGG + chr4_2:68461268-68461287 None:intergenic 65.0%
!! AGGGTGCCGGCTTGAGTGCT+AGG + chr4_2:68461269-68461288 None:intergenic 65.0%
GGGCCCAACCCTAGACAAGG+AGG + chr4_2:68463646-68463665 None:intergenic 65.0%
ACGGGGCCTCCGAATTGTCG+GGG - chr4_2:68464874-68464893 Msa0617770:CDS 65.0%
GGCCTCCGAATTGTCGGGGA+CGG - chr4_2:68464878-68464897 Msa0617770:CDS 65.0%
CAGGGCCGTCCCCGACAATT+CGG + chr4_2:68464886-68464905 None:intergenic 65.0%
TGTTGCCGGCGGTGAGGTTC+CGG + chr4_2:68465413-68465432 None:intergenic 65.0%
!! GGAGTTTGTTGCCGGCGGTG+AGG + chr4_2:68465419-68465438 None:intergenic 65.0%
GGTCCGTCGCGACCCATCTC+CGG - chr4_2:68459713-68459732 Msa0617770:three_prime_UTR 70.0%
GCGCATCTACGCGCTAGGGC+AGG - chr4_2:68461041-68461060 Msa0617770:intron 70.0%
GGGCCGGCCCTGTTCCTTGT+AGG + chr4_2:68464597-68464616 None:intergenic 70.0%
GGCCGTCCCCGACAATTCGG+AGG + chr4_2:68464883-68464902 None:intergenic 70.0%
TGTCGGGGACGGCCCTGACA+AGG - chr4_2:68464889-68464908 Msa0617770:CDS 70.0%
CCTCACCGGAACCTCACCGC+CGG - chr4_2:68465405-68465424 Msa0617770:intron 70.0%
GGGTCGCGACGGACCTGCTG+CGG + chr4_2:68459708-68459727 None:intergenic 75.0%
CCGGCGGTGAGGTTCCGGTG+AGG + chr4_2:68465408-68465427 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 68459507 68467030 68459507 ID=Msa0617770;Name=Msa0617770
chr4_2 mRNA 68459507 68467030 68459507 ID=Msa0617770-mRNA-1;Parent=Msa0617770;Name=Msa0617770-mRNA-1;_AED=0.18;_eAED=0.18;_QI=611|0.83|0.85|1|0.5|0.57|7|237|186
chr4_2 exon 68459507 68459815 68459507 ID=Msa0617770-mRNA-1:exon:19653;Parent=Msa0617770-mRNA-1
chr4_2 exon 68464096 68464185 68464096 ID=Msa0617770-mRNA-1:exon:19652;Parent=Msa0617770-mRNA-1
chr4_2 exon 68464303 68464405 68464303 ID=Msa0617770-mRNA-1:exon:19651;Parent=Msa0617770-mRNA-1
chr4_2 exon 68464526 68464606 68464526 ID=Msa0617770-mRNA-1:exon:19650;Parent=Msa0617770-mRNA-1
chr4_2 exon 68464703 68464927 68464703 ID=Msa0617770-mRNA-1:exon:19649;Parent=Msa0617770-mRNA-1
chr4_2 exon 68465946 68466266 68465946 ID=Msa0617770-mRNA-1:exon:19648;Parent=Msa0617770-mRNA-1
chr4_2 exon 68466751 68467030 68466751 ID=Msa0617770-mRNA-1:exon:19647;Parent=Msa0617770-mRNA-1
chr4_2 five_prime_UTR 68466751 68467030 68466751 ID=Msa0617770-mRNA-1:five_prime_utr;Parent=Msa0617770-mRNA-1
chr4_2 five_prime_UTR 68465946 68466266 68465946 ID=Msa0617770-mRNA-1:five_prime_utr;Parent=Msa0617770-mRNA-1
chr4_2 five_prime_UTR 68464918 68464927 68464918 ID=Msa0617770-mRNA-1:five_prime_utr;Parent=Msa0617770-mRNA-1
chr4_2 CDS 68464703 68464917 68464703 ID=Msa0617770-mRNA-1:cds;Parent=Msa0617770-mRNA-1
chr4_2 CDS 68464526 68464606 68464526 ID=Msa0617770-mRNA-1:cds;Parent=Msa0617770-mRNA-1
chr4_2 CDS 68464303 68464405 68464303 ID=Msa0617770-mRNA-1:cds;Parent=Msa0617770-mRNA-1
chr4_2 CDS 68464096 68464185 68464096 ID=Msa0617770-mRNA-1:cds;Parent=Msa0617770-mRNA-1
chr4_2 CDS 68459744 68459815 68459744 ID=Msa0617770-mRNA-1:cds;Parent=Msa0617770-mRNA-1
chr4_2 three_prime_UTR 68459507 68459743 68459507 ID=Msa0617770-mRNA-1:three_prime_utr;Parent=Msa0617770-mRNA-1
Gene Sequence

>Msa0617770

ATGGATTCATCACAAAATCCAGCTGCAGGTGGAAATGGGACGCTGATATCTCACGGTAATGATACAGCAGCTTCTGCATCAGGAGCTGATGATTCTATGCAAAACCTTAGCCAGATCAGCAACTCCATTGAGAAAACCCTGGGCCTCATCCATCAGCTCTCCCTCACCGTCTCAACCTTCAATTCTGCTTTGCAAATGCCACTCCTCCAACGCATCAATGGTCTTGTTGCGGAGCTTGACAACATGGTCAAATTGGCAGAAAAGTGTAACATTCAGGTTCCCATGGAGGTTGTTAACTTAATTGATGATGGGAAGAATCCAGATGAATTTACGAAAGATGTTATTAACAACTGTATTGCAAAGAATCAAATCACTAAAGGAAAAACTGATGCTTTGAAGGATTTGCGCAAGCATCTTTTGGAGGAATTGGAGCAGAACTTCCCTGATGAGGTTGAAACTTTTAGAGAGAATCGTGCTGCTTCTGCTGCTGAGTTGAAACGTTTGGCGCAAGCACCAAGTGTACTACCAAATGGAGATGCAAGGGCTAAAGTAGAGCATTGA
Protein sequence

>Msa0617770

MDSSQNPAAGGNGTLISHGNDTAASASGADDSMQNLSQISNSIEKTLGLIHQLSLTVSTFNSALQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDVINNCIAKNQITKGKTDALKDLRKHLLEELEQNFPDEVETFRENRAASAAELKRLAQAPSVLPNGDARAKVEH*