AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0814630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0814630 MtrunA17_Chr5g0432831 100.000 148 0 0 1 148 1 148 5.28e-110 308
Msa0814630 MtrunA17_Chr3g0108261 98.649 148 2 0 1 148 1 148 1.15e-108 305
Msa0814630 MtrunA17_Chr7g0275361 96.622 148 5 0 1 148 1 148 9.63e-107 300
Msa0814630 MtrunA17_Chr1g0154011 91.892 148 12 0 1 148 1 148 4.66e-103 291
Msa0814630 MtrunA17_Chr8g0369311 92.568 148 11 0 1 148 57 204 2.20e-102 291
Msa0814630 MtrunA17_Chr4g0037011 91.216 148 13 0 1 148 1 148 2.21e-102 289
Msa0814630 MtrunA17_Chr8g0378601 51.724 145 70 0 2 146 23 167 1.31e-55 172
Msa0814630 MtrunA17_Chr2g0316201 49.655 145 73 0 4 148 8 152 2.64e-48 152
Msa0814630 MtrunA17_Chr2g0316211 49.306 144 73 0 5 148 9 152 2.83e-47 150
Msa0814630 MtrunA17_Chr4g0060351 45.890 146 74 1 2 142 5 150 2.60e-45 145
Msa0814630 MtrunA17_Chr8g0362321 45.205 146 75 1 2 142 5 150 4.03e-45 144
Msa0814630 MtrunA17_Chr3g0131871 48.611 144 72 2 5 146 6 149 3.06e-42 139
Msa0814630 MtrunA17_Chr3g0139901 40.136 147 84 3 5 147 7 153 2.93e-34 117
Msa0814630 MtrunA17_Chr4g0038891 44.355 124 69 0 4 127 35 158 6.72e-34 117
Msa0814630 MtrunA17_Chr1g0199951 45.669 127 68 1 3 128 43 169 5.05e-33 115
Msa0814630 MtrunA17_Chr5g0396451 41.406 128 75 0 4 131 35 162 3.83e-32 112
Msa0814630 MtrunA17_Chr4g0053191 36.184 152 90 2 1 145 4 155 8.45e-30 105
Msa0814630 MtrunA17_Chr4g0031181 35.821 134 72 2 15 134 18 151 2.83e-27 99.8
Msa0814630 MtrunA17_Chr5g0401831 33.553 152 94 2 1 145 4 155 3.59e-27 99.4
Msa0814630 MtrunA17_Chr8g0348701 37.398 123 75 2 26 146 25 147 6.75e-27 99.4
Msa0814630 MtrunA17_Chr5g0403591 36.765 136 83 2 5 139 33 166 2.01e-26 98.2
Msa0814630 MtrunA17_Chr8g0387131 35.766 137 86 2 12 146 11 147 9.45e-26 96.3
Msa0814630 MtrunA17_Chr7g0254701 34.965 143 93 0 4 146 13 155 2.55e-25 97.4
Msa0814630 MtrunA17_Chr2g0328001 34.028 144 81 2 15 144 18 161 8.90e-25 93.6
Msa0814630 MtrunA17_Chr4g0059291 30.894 123 83 2 26 146 25 147 2.43e-22 87.8
Msa0814630 MtrunA17_Chr8g0372391 37.864 103 62 2 1 102 15 116 1.57e-18 77.0
Msa0814630 MtrunA17_Chr4g0068301 34.454 119 68 4 2 114 11 125 2.07e-18 79.7
Msa0814630 MtrunA17_Chr8g0376111 31.373 153 87 5 4 144 43 189 4.02e-18 79.0
Msa0814630 MtrunA17_Chr5g0404931 36.893 103 63 2 1 102 15 116 5.96e-18 75.5
Msa0814630 MtrunA17_Chr7g0233631 36.885 122 67 3 4 115 38 159 3.05e-17 76.6
Msa0814630 MtrunA17_Chr7g0233611 36.885 122 67 3 4 115 38 159 7.11e-17 75.5
Msa0814630 MtrunA17_Chr8g0345331 32.479 117 70 3 4 115 8 120 5.55e-16 72.0
Msa0814630 MtrunA17_Chr4g0047301 31.333 150 90 4 4 143 672 818 3.33e-15 71.6
Msa0814630 MtrunA17_Chr7g0222941 30.894 123 75 3 3 115 90 212 8.02e-15 68.9
Msa0814630 MtrunA17_Chr2g0282211 28.947 152 95 4 3 144 681 829 2.90e-14 68.9
Msa0814630 MtrunA17_Chr4g0045101 32.787 122 72 3 4 115 37 158 3.84e-14 67.8
Msa0814630 MtrunA17_Chr1g0186291 30.303 99 55 2 43 140 30 115 2.04e-13 63.2
Msa0814630 MtrunA17_Chr2g0317631 30.081 123 76 3 3 115 306 428 1.35e-12 63.9
Msa0814630 MtrunA17_Chr8g0376201 30.496 141 87 4 3 133 192 331 2.24e-12 63.2
Msa0814630 MtrunA17_Chr1g0198021 28.455 123 78 3 3 115 137 259 3.41e-12 62.8
Msa0814630 MtrunA17_Chr1g0211131 29.508 122 76 3 4 115 823 944 5.26e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0814630 AT5G41700.5 97.297 148 4 0 1 148 1 148 5.33e-108 304
Msa0814630 AT5G41700.2 97.297 148 4 0 1 148 1 148 5.33e-108 304
Msa0814630 AT5G41700.1 97.297 148 4 0 1 148 1 148 5.33e-108 304
Msa0814630 AT1G64230.2 96.622 148 5 0 1 148 1 148 6.02e-108 303
Msa0814630 AT1G64230.1 96.622 148 5 0 1 148 1 148 6.02e-108 303
Msa0814630 AT4G27960.1 95.270 148 7 0 1 148 1 148 2.68e-106 299
Msa0814630 AT5G53300.2 95.270 148 7 0 1 148 1 148 5.98e-106 298
Msa0814630 AT5G53300.4 95.270 148 7 0 1 148 1 148 5.98e-106 298
Msa0814630 AT5G53300.1 95.270 148 7 0 1 148 1 148 5.98e-106 298
Msa0814630 AT4G27960.2 95.270 148 7 0 1 148 31 178 8.91e-106 299
Msa0814630 AT5G41700.4 95.973 149 5 1 1 148 1 149 3.47e-105 296
Msa0814630 AT3G08690.2 93.243 148 10 0 1 148 1 148 2.82e-104 294
Msa0814630 AT3G08690.1 93.243 148 10 0 1 148 1 148 2.82e-104 294
Msa0814630 AT1G64230.3 90.446 157 6 1 1 148 1 157 2.29e-103 292
Msa0814630 AT5G56150.1 88.514 148 17 0 1 148 1 148 5.54e-100 283
Msa0814630 AT1G64230.5 74.737 190 6 1 1 148 1 190 6.21e-99 282
Msa0814630 AT1G64230.4 74.737 190 6 1 1 148 1 190 6.21e-99 282
Msa0814630 AT2G16740.1 87.075 147 19 0 1 147 1 147 3.55e-98 279
Msa0814630 AT3G08700.2 79.195 149 30 1 1 148 1 149 3.19e-87 251
Msa0814630 AT3G08700.1 79.195 149 30 1 1 148 1 149 3.19e-87 251
Msa0814630 AT5G41700.3 96.154 104 4 0 1 104 1 104 1.21e-72 214
Msa0814630 AT5G53300.3 92.661 109 6 1 1 107 1 109 4.14e-71 209
Msa0814630 AT5G56150.2 86.408 103 14 0 1 103 1 103 1.58e-65 195
Msa0814630 AT3G13550.1 48.276 145 75 0 2 146 37 181 2.36e-53 167
Msa0814630 AT1G16890.2 50.345 145 72 0 4 148 8 152 7.49e-49 154
Msa0814630 AT1G78870.2 49.655 145 73 0 4 148 8 152 6.88e-48 152
Msa0814630 AT1G16890.3 48.052 154 71 1 4 148 8 161 3.51e-46 148
Msa0814630 AT5G62540.1 49.254 134 68 0 2 135 5 138 6.65e-46 147
Msa0814630 AT1G14400.1 46.575 146 73 1 2 142 5 150 1.42e-45 146
Msa0814630 AT1G14400.2 46.575 146 73 1 2 142 5 150 1.42e-45 146
Msa0814630 AT2G02760.1 45.890 146 74 1 2 142 5 150 3.12e-45 145
Msa0814630 AT2G02760.2 45.890 146 74 1 2 142 5 150 3.12e-45 145
Msa0814630 AT2G02760.4 45.890 146 74 1 2 142 5 150 3.12e-45 145
Msa0814630 AT2G02760.3 45.890 146 74 1 2 142 5 150 3.12e-45 145
Msa0814630 AT1G36340.2 48.966 145 73 1 2 146 9 152 3.95e-45 145
Msa0814630 AT1G36340.1 48.966 145 73 1 2 146 9 152 3.95e-45 145
Msa0814630 AT3G13550.2 50.000 114 57 0 2 115 37 150 3.12e-42 138
Msa0814630 AT1G16890.1 52.941 119 56 0 30 148 1 119 1.04e-41 135
Msa0814630 AT1G78870.4 52.941 119 56 0 30 148 1 119 1.82e-41 134
Msa0814630 AT1G78870.1 52.500 120 56 1 30 148 1 120 1.08e-39 130
Msa0814630 AT5G50870.1 45.833 144 76 2 5 146 6 149 1.99e-39 132
Msa0814630 AT2G32790.1 49.342 152 68 4 2 148 30 177 2.39e-36 123
Msa0814630 AT5G50870.2 42.581 155 76 3 5 146 6 160 5.10e-36 123
Msa0814630 AT3G24515.1 43.949 157 75 3 3 146 8 164 1.03e-34 125
Msa0814630 AT5G25760.1 38.776 147 86 3 5 147 7 153 1.24e-32 113
Msa0814630 AT5G25760.2 38.776 147 86 3 5 147 7 153 1.24e-32 113
Msa0814630 AT1G78870.3 48.571 105 54 0 4 108 8 112 2.19e-32 111
Msa0814630 AT3G24515.3 45.902 122 62 1 29 146 68 189 4.44e-32 118
Msa0814630 AT3G20060.1 42.742 124 71 0 4 127 39 162 8.43e-31 109
Msa0814630 AT1G50490.1 43.548 124 70 0 4 127 38 161 2.37e-30 108
Msa0814630 AT3G20060.2 43.636 110 62 0 22 131 12 121 3.08e-29 104
Msa0814630 AT2G46030.5 37.162 148 90 3 1 146 1 147 5.94e-29 105
Msa0814630 AT2G46030.1 37.162 148 90 3 1 146 1 147 5.94e-29 105
Msa0814630 AT2G46030.3 37.162 148 90 3 1 146 73 219 1.49e-28 105
Msa0814630 AT2G46030.4 39.837 123 72 2 26 146 28 150 2.22e-28 103
Msa0814630 AT2G46030.2 39.837 123 72 2 26 146 28 150 2.22e-28 103
Msa0814630 AT3G57870.1 34.868 152 92 2 1 145 5 156 4.76e-28 102
Msa0814630 AT5G05080.2 37.063 143 90 0 4 146 13 155 1.10e-27 103
Msa0814630 AT5G05080.3 37.063 143 90 0 4 146 13 155 1.10e-27 103
Msa0814630 AT5G05080.1 37.063 143 90 0 4 146 13 155 1.10e-27 103
Msa0814630 AT5G05080.4 37.063 143 90 0 4 146 13 155 1.10e-27 103
Msa0814630 AT3G55380.1 37.313 134 70 2 15 134 19 152 1.98e-27 100
Msa0814630 AT5G41340.1 38.211 123 74 2 26 146 25 147 8.98e-27 99.4
Msa0814630 AT1G63800.2 38.211 123 74 2 26 146 10 132 1.11e-26 98.6
Msa0814630 AT1G63800.1 38.211 123 74 2 26 146 25 147 1.22e-26 99.0
Msa0814630 AT5G59300.1 34.722 144 80 2 15 144 18 161 3.02e-25 95.1
Msa0814630 AT4G36800.2 35.036 137 84 3 5 139 34 167 4.38e-25 95.1
Msa0814630 AT4G36800.1 35.036 137 84 3 5 139 34 167 4.38e-25 95.1
Msa0814630 AT3G46460.1 34.028 144 81 2 15 144 18 161 5.36e-25 94.4
Msa0814630 AT5G41340.2 40.385 104 60 2 45 146 9 112 1.24e-23 90.5
Msa0814630 AT2G18600.1 35.036 137 84 3 5 139 35 168 2.46e-23 90.5
Msa0814630 AT2G18600.2 35.036 137 84 3 5 139 35 168 2.46e-23 90.5
Msa0814630 AT3G17000.1 36.975 119 65 4 2 114 12 126 2.10e-20 85.5
Msa0814630 AT3G55380.2 29.586 169 71 3 15 135 19 187 3.27e-20 82.8
Msa0814630 AT1G75440.1 37.963 108 61 3 1 107 15 117 3.94e-18 76.6
Msa0814630 AT1G45050.1 36.893 103 63 2 1 102 15 116 1.22e-17 75.1
Msa0814630 AT5G42990.1 37.864 103 62 2 1 102 15 116 1.97e-17 74.7
Msa0814630 AT3G46460.3 30.631 111 64 1 47 144 9 119 1.49e-16 71.2
Msa0814630 AT3G46460.2 30.631 111 64 1 47 144 9 119 1.49e-16 71.2
Msa0814630 AT1G17280.9 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0814630 AT1G17280.7 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0814630 AT1G17280.6 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0814630 AT1G17280.2 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0814630 AT1G17280.5 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0814630 AT1G17280.3 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0814630 AT1G17280.1 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0814630 AT1G17280.8 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0814630 AT4G36410.1 34.259 108 65 3 1 107 15 117 1.72e-16 72.0
Msa0814630 AT5G50430.1 33.333 117 69 3 4 115 8 120 1.95e-16 73.6
Msa0814630 AT5G50430.2 33.333 117 69 3 4 115 8 120 1.95e-16 73.6
Msa0814630 AT1G17280.4 30.894 123 70 3 4 115 8 126 3.99e-15 70.1
Msa0814630 AT3G15355.1 28.947 152 95 4 3 144 334 482 3.26e-12 63.2
Msa0814630 AT1G53025.2 30.328 122 75 3 4 115 274 395 2.83e-11 60.5
Msa0814630 AT1G53025.1 30.328 122 75 3 4 115 274 395 3.16e-11 60.5
Msa0814630 AT1G45050.2 33.708 89 57 2 1 88 15 102 5.36e-11 56.6
Msa0814630 AT1G53023.1 31.148 122 74 3 4 115 60 181 7.11e-11 59.3

Find 90 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGGAAATGGCTTATTATT+TGG 0.110923 5_3:-46862258 Msa0814630:three_prime_UTR
CAATATTCACAATTGATAAA+TGG 0.173693 5_3:+46862355 None:intergenic
TATTATTTGGATTGTGTTGT+AGG 0.216327 5_3:-46862245 Msa0814630:three_prime_UTR
TTGTACATGTGTGCAATTTC+AGG 0.243362 5_3:+46862572 None:intergenic
TATTTAAGTTTGAGTGATTA+TGG 0.283035 5_3:-46867323 Msa0814630:intron
ATATACTGGTGGTGTGTTCC+TGG 0.285935 5_3:-46865494 Msa0814630:CDS
CTGCCATTACTGTTGATGTT+TGG 0.288456 5_3:+46862947 None:intergenic
AGGAACACACCACCAGTATA+TGG 0.290101 5_3:+46865496 None:intergenic
TGCCATTACTGTTGATGTTT+GGG 0.308240 5_3:+46862948 None:intergenic
ATGCCATCTTTATTGTTTAG+TGG 0.346543 5_3:-46862403 Msa0814630:three_prime_UTR
ACAAGTGGATCATCGGGGTT+GGG 0.347133 5_3:+46862596 None:intergenic
GTCAATTTGCTCGTTGTTGA+CGG 0.355439 5_3:-46862621 Msa0814630:CDS
AACCTGCACTGCATGAAGTT+GGG 0.370343 5_3:+46867254 None:intergenic
ATTCTTGAAAATCAAAGAAA+TGG 0.380237 5_3:+46867601 None:intergenic
GCGAGCTGTGGCTTCATACT+TGG 0.382810 5_3:+46862538 None:intergenic
AATCTTTGTGCTTGTTGACC+TGG 0.402263 5_3:-46862290 Msa0814630:three_prime_UTR
AATATTCACAATTGATAAAT+GGG 0.410961 5_3:+46862356 None:intergenic
TTGGATTGTGTTGTAGGTCT+TGG 0.411170 5_3:-46862239 Msa0814630:three_prime_UTR
GGATGTGGATTAAGATCAAA+TGG 0.422664 5_3:+46862144 None:intergenic
TCAGGAACAAGTGGATCATC+GGG 0.432078 5_3:+46862590 None:intergenic
GAATACCTTTGGTGGCTTGA+AGG 0.432336 5_3:+46865444 None:intergenic
GTAATATCAAACCTTGGAAA+TGG 0.433618 5_3:+46862880 None:intergenic
TGGAAGAAGAATGAATGATT+TGG 0.439223 5_3:+46867487 None:intergenic
ACCTTGGAAATGGTTAAAGC+TGG 0.447093 5_3:+46862890 None:intergenic
ATGAAGCCACAGCTCGCAGC+TGG 0.457816 5_3:-46862532 Msa0814630:CDS
TTGACCTGGTATTCCTAGCT+AGG 0.463411 5_3:-46862276 Msa0814630:three_prime_UTR
TGGTATTCCTAGCTAGGAAA+TGG 0.465221 5_3:-46862270 Msa0814630:three_prime_UTR
AGTGGAACTTGAAGCTGGTA+AGG 0.470147 5_3:-46862385 Msa0814630:three_prime_UTR
TTCTTCCACGCTTCCGACCC+AGG 0.471097 5_3:-46867472 Msa0814630:intron
TAATAAGCCATTTCCTAGCT+AGG 0.471718 5_3:+46862263 None:intergenic
CCGGCTGATAGCCCATATAC+TGG 0.473020 5_3:-46865508 Msa0814630:CDS
AATACCTTTGGTGGCTTGAA+GGG 0.473573 5_3:+46865445 None:intergenic
GGTGGCTTGAAGGGATAGTC+AGG 0.473711 5_3:+46865454 None:intergenic
AACAAGTGGATCATCGGGGT+TGG 0.475495 5_3:+46862595 None:intergenic
TTCAGGAACAAGTGGATCAT+CGG 0.479213 5_3:+46862589 None:intergenic
AAACCTGCACTGCATGAAGT+TGG 0.486829 5_3:+46867253 None:intergenic
CACTGGCAAGCCACAATCAT+GGG 0.492054 5_3:-46865532 Msa0814630:CDS
CAAGTGGATCATCGGGGTTG+GGG 0.503531 5_3:+46862597 None:intergenic
TGGTTGGAGAAGGGTGAAGG+AGG 0.511377 5_3:+46867507 None:intergenic
ATTTGGTTGGAGAAGGGTGA+AGG 0.512093 5_3:+46867504 None:intergenic
GGCTTCATACTTGGCCCTGT+CGG 0.512375 5_3:+46862547 None:intergenic
TGTTTAGTGGAACTTGAAGC+TGG 0.513586 5_3:-46862390 Msa0814630:three_prime_UTR
GGAACACACCACCAGTATAT+GGG 0.514259 5_3:+46865497 None:intergenic
TATATCAGGTCCTGTGGCTG+AGG 0.520756 5_3:-46865563 Msa0814630:intron
ACCTGCACTGCATGAAGTTG+GGG 0.521550 5_3:+46867255 None:intergenic
TGAATGATTTGGTTGGAGAA+GGG 0.525842 5_3:+46867498 None:intergenic
GGCGTCGAAACGAATCTTGA+AGG 0.526427 5_3:-46867302 Msa0814630:CDS
CCACTGGCAAGCCACAATCA+TGG 0.528486 5_3:-46865533 Msa0814630:CDS
AGAAGAATGAATGATTTGGT+TGG 0.528769 5_3:+46867491 None:intergenic
GTTCCACTAAACAATAAAGA+TGG 0.532133 5_3:+46862400 None:intergenic
ACAACGAGCAAATTGACAAA+AGG 0.532368 5_3:+46862627 None:intergenic
CCCAGCTTTAACCATTTCCA+AGG 0.532924 5_3:-46862891 Msa0814630:intron
ATGAATGATTTGGTTGGAGA+AGG 0.534820 5_3:+46867497 None:intergenic
GCAAGCCACAATCATGGGAC+CGG 0.541067 5_3:-46865527 Msa0814630:CDS
CACACATGTACAAGACCGAC+AGG 0.541851 5_3:-46862562 Msa0814630:CDS
TGGCTGAGGACATGTTCCAC+TGG 0.551041 5_3:-46865549 Msa0814630:CDS
GCAGGGTAGAATACCTTTGG+TGG 0.551279 5_3:+46865436 None:intergenic
TGGAACATGTCCTCAGCCAC+AGG 0.551736 5_3:+46865553 None:intergenic
ATCAGCCGGTCCCATGATTG+TGG 0.551941 5_3:+46865522 None:intergenic
CACCCAAACATCAACAGTAA+TGG 0.557095 5_3:-46862950 Msa0814630:CDS
ACAAACCTGGGTCGGAAGCG+TGG 0.557176 5_3:+46867467 None:intergenic
GTGGAACTTGAAGCTGGTAA+GGG 0.557221 5_3:-46862384 Msa0814630:three_prime_UTR
CTGTGTCCAGCTGCGAGCTG+TGG 0.570255 5_3:+46862526 None:intergenic
ATTCACAATTGATAAATGGG+TGG 0.570929 5_3:+46862359 None:intergenic
ATTTCCTAGCTAGGAATACC+AGG 0.572459 5_3:+46862272 None:intergenic
CCTTGGAAATGGTTAAAGCT+GGG 0.572832 5_3:+46862891 None:intergenic
ACGAATCTTGAAGGAGCTCA+AGG 0.573806 5_3:-46867293 Msa0814630:CDS
TTCACAATTGATAAATGGGT+GGG 0.583857 5_3:+46862360 None:intergenic
CCATGATTGTGGCTTGCCAG+TGG 0.587184 5_3:+46865533 None:intergenic
CATTACTGTTGATGTTTGGG+TGG 0.591313 5_3:+46862951 None:intergenic
GATGTTTGGGTGGAACACCT+TGG 0.592752 5_3:+46862961 None:intergenic
CCAGTATATGGGCTATCAGC+CGG 0.596648 5_3:+46865508 None:intergenic
GCTGCTCTTATTGAACAGCT+AGG 0.596651 5_3:+46862475 None:intergenic
CTGGACACAGAAGTATGCCA+TGG 0.597546 5_3:-46862513 Msa0814630:CDS
GTTGTTTATATCAGGTCCTG+TGG 0.599795 5_3:-46865569 Msa0814630:intron
TGTGCAATTTCAGGAACAAG+TGG 0.608694 5_3:+46862581 None:intergenic
TATATGTCTCGACATTCTGA+AGG 0.618427 5_3:-46862924 Msa0814630:CDS
CTATCCCTTCAAGCCACCAA+AGG 0.619090 5_3:-46865449 Msa0814630:intron
GAGGAAAATGAATTGAAACC+AGG 0.619103 5_3:+46865476 None:intergenic
TTGTAAGACACTTGTTATCG+AGG 0.620922 5_3:-46862330 Msa0814630:three_prime_UTR
CCTGCACTGCATGAAGTTGG+GGG 0.626857 5_3:+46867256 None:intergenic
GGAGCTCAAGGATTTGCAGA+AGG 0.628349 5_3:-46867281 Msa0814630:CDS
TGGACACAGAAGTATGCCAT+GGG 0.652544 5_3:-46862512 Msa0814630:CDS
GGACAAACATGATCATCCCA+TGG 0.655565 5_3:+46862496 None:intergenic
GGCTTGAAGGGATAGTCAGG+AGG 0.665116 5_3:+46865457 None:intergenic
TCGACATTCTGAAGGAACAG+TGG 0.672640 5_3:-46862916 Msa0814630:CDS
CTGCACTGCATGAAGTTGGG+GGG 0.679610 5_3:+46867257 None:intergenic
ACACATGTACAAGACCGACA+GGG 0.717087 5_3:-46862561 Msa0814630:CDS
GCTGATAGCCCATATACTGG+TGG 0.737012 5_3:-46865505 Msa0814630:CDS
CAGGAACAAGTGGATCATCG+GGG 0.748108 5_3:+46862591 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATATTTTTCTTTGAA+TGG + chr5_3:46862212-46862231 None:intergenic 10.0%
!!! CAAATTTTTAATAAAAAAAG+GGG + chr5_3:46862569-46862588 None:intergenic 10.0%
!!! TTTTCTTAAAACTTTTATAT+TGG - chr5_3:46862590-46862609 Msa0814630:CDS 10.0%
!!! AAAATTGCAAATTTTCAAAT+AGG + chr5_3:46862937-46862956 None:intergenic 15.0%
!! TGTATATTAGTAGAAAAATA+TGG + chr5_3:46862977-46862996 None:intergenic 15.0%
!!! TAAATTTGTTTCTTCTAAAA+TGG - chr5_3:46863222-46863241 Msa0814630:intron 15.0%
!!! TGTAATTTTTATCCATAAAA+TGG - chr5_3:46863263-46863282 Msa0814630:intron 15.0%
!!! GTAATTTTTATCCATAAAAT+GGG - chr5_3:46863264-46863283 Msa0814630:intron 15.0%
!!! TCTTTTTTTAAAATTTTGCT+TGG - chr5_3:46863332-46863351 Msa0814630:intron 15.0%
!! GCTTAAAAAAAAGATATAAA+TGG + chr5_3:46863522-46863541 None:intergenic 15.0%
!! AATAAAATGAAAATATAACC+CGG - chr5_3:46863586-46863605 Msa0814630:intron 15.0%
!! TGTTATAATATGTATGTTAA+TGG - chr5_3:46863743-46863762 Msa0814630:intron 15.0%
!! AAAGGTAAATATATGTTAAA+GGG + chr5_3:46864064-46864083 None:intergenic 15.0%
!! AAAAGGTAAATATATGTTAA+AGG + chr5_3:46864065-46864084 None:intergenic 15.0%
!! GAATAATTAATAACTAAACA+TGG - chr5_3:46864170-46864189 Msa0814630:intron 15.0%
!! CAACTATAAAATATTATGTA+AGG + chr5_3:46864933-46864952 None:intergenic 15.0%
!!! TACATAATATTTTATAGTTG+AGG - chr5_3:46864933-46864952 Msa0814630:intron 15.0%
!!! ACATAATATTTTATAGTTGA+GGG - chr5_3:46864934-46864953 Msa0814630:intron 15.0%
!! TTTCTATATTAAAATCATAG+AGG - chr5_3:46865870-46865889 Msa0814630:intron 15.0%
!! AATATTCACAATTGATAAAT+GGG + chr5_3:46867422-46867441 None:intergenic 15.0%
!! ATTCTTGAAAATCAAAGAAA+TGG + chr5_3:46862177-46862196 None:intergenic 20.0%
!! AAAAAGTTGAAGAATTGAAA+GGG + chr5_3:46862355-46862374 None:intergenic 20.0%
!! AAAAAAGTTGAAGAATTGAA+AGG + chr5_3:46862356-46862375 None:intergenic 20.0%
!! GATAAATGGTTAAAAATGAA+TGG + chr5_3:46862398-46862417 None:intergenic 20.0%
!!! TATTTAAGTTTGAGTGATTA+TGG - chr5_3:46862452-46862471 Msa0814630:three_prime_UTR 20.0%
!! TTTAATAAAAAAAGGGGAAA+TGG + chr5_3:46862563-46862582 None:intergenic 20.0%
!! CACATAACTTATTAATGATT+TGG + chr5_3:46863483-46863502 None:intergenic 20.0%
!! ATCATTAATAAGTTATGTGA+TGG - chr5_3:46863484-46863503 Msa0814630:intron 20.0%
!!! TCATTTTATTTGCTGAAAAA+TGG + chr5_3:46863576-46863595 None:intergenic 20.0%
!! ATAAAATGAAAATATAACCC+GGG - chr5_3:46863587-46863606 Msa0814630:intron 20.0%
!! GAAAATGATAAATGTTTGAA+GGG - chr5_3:46863765-46863784 Msa0814630:intron 20.0%
!! AAAATGATAAATGTTTGAAG+GGG - chr5_3:46863766-46863785 Msa0814630:intron 20.0%
!!! AAATGAGACATACATTTTAT+AGG - chr5_3:46863938-46863957 Msa0814630:intron 20.0%
!! GATGAAATAACATATACAAA+AGG + chr5_3:46864082-46864101 None:intergenic 20.0%
!! TAATTATTCTTCAGAAGAAA+AGG + chr5_3:46864159-46864178 None:intergenic 20.0%
!! CCAAAAATAATTTGAGAAAA+CGG + chr5_3:46864699-46864718 None:intergenic 20.0%
!!! CATAATATTTTATAGTTGAG+GGG - chr5_3:46864935-46864954 Msa0814630:intron 20.0%
!! ATCATTTATAATCATGGTTA+TGG - chr5_3:46865362-46865381 Msa0814630:intron 20.0%
!! TCATTTATAATCATGGTTAT+GGG - chr5_3:46865363-46865382 Msa0814630:intron 20.0%
!!! GTTTTAGTTAAGAAATTCAT+TGG - chr5_3:46865954-46865973 Msa0814630:intron 20.0%
!!! CTTTTACATAAATTATGACA+TGG + chr5_3:46867325-46867344 None:intergenic 20.0%
!! CAATATTCACAATTGATAAA+TGG + chr5_3:46867423-46867442 None:intergenic 20.0%
! AATTGAAAGGGAAAATGAAA+AGG + chr5_3:46862343-46862362 None:intergenic 25.0%
! ATTATGAGACAAGTGATAAA+TGG + chr5_3:46862412-46862431 None:intergenic 25.0%
!!! TTGTTGATTTGTTGTGTTTA+TGG - chr5_3:46862649-46862668 Msa0814630:intron 25.0%
! AAATATGGTCAAACTAAGTT+GGG + chr5_3:46862962-46862981 None:intergenic 25.0%
! AAAATATGGTCAAACTAAGT+TGG + chr5_3:46862963-46862982 None:intergenic 25.0%
! TTAAGCTCAAAATTATGCAT+TGG - chr5_3:46863098-46863117 Msa0814630:intron 25.0%
! TGAAGAAACAATGAACAATT+AGG + chr5_3:46863173-46863192 None:intergenic 25.0%
!! TAATAAGTTATGTGATGGAA+TGG - chr5_3:46863489-46863508 Msa0814630:intron 25.0%
!!! TTTTTTAAGCCTGAAATACT+AGG - chr5_3:46863532-46863551 Msa0814630:intron 25.0%
! TAAAATGAAAATATAACCCG+GGG - chr5_3:46863588-46863607 Msa0814630:intron 25.0%
! GGAAAATGATAAATGTTTGA+AGG - chr5_3:46863764-46863783 Msa0814630:intron 25.0%
!!! TGATTTGTTTGTAATTAGCT+TGG - chr5_3:46864126-46864145 Msa0814630:intron 25.0%
!! GATTTGTTTGTAATTAGCTT+GGG - chr5_3:46864127-46864146 Msa0814630:intron 25.0%
!! ATTTGTTTGTAATTAGCTTG+GGG - chr5_3:46864128-46864147 Msa0814630:intron 25.0%
!!! TTGTTGTTGTTGTTTATATC+AGG - chr5_3:46864198-46864217 Msa0814630:intron 25.0%
!!! TTCAAAAGCATTTTGATTCA+AGG - chr5_3:46864529-46864548 Msa0814630:intron 25.0%
!! CCGTTTTCTCAAATTATTTT+TGG - chr5_3:46864696-46864715 Msa0814630:intron 25.0%
!!! TTGTTTTTCTCTTTTGTTGT+GGG - chr5_3:46865093-46865112 Msa0814630:intron 25.0%
!! TATAAATGATTTGCACAACA+TGG + chr5_3:46865352-46865371 None:intergenic 25.0%
! GTGCAAATCATTTATAATCA+TGG - chr5_3:46865356-46865375 Msa0814630:intron 25.0%
!!! GTTTTTTCCTTTTCATGATT+GGG - chr5_3:46865459-46865478 Msa0814630:CDS 25.0%
!! ATTTTTACCCAATCATGAAA+AGG + chr5_3:46865469-46865488 None:intergenic 25.0%
! CATGATTGGGTAAAAATATT+TGG - chr5_3:46865472-46865491 Msa0814630:CDS 25.0%
! TTATTGAATAAAATCCACGT+GGG + chr5_3:46865652-46865671 None:intergenic 25.0%
! GAAATCACATTACACATATA+TGG + chr5_3:46865820-46865839 None:intergenic 25.0%
! TGTATATTGTTTAGATACAG+AGG - chr5_3:46866188-46866207 Msa0814630:intron 25.0%
!!! TTTCTCGTAGATTTTTGTTT+CGG - chr5_3:46866485-46866504 Msa0814630:intron 25.0%
! AAATATACTACGACAATACT+CGG + chr5_3:46867013-46867032 None:intergenic 25.0%
! TATTATTTGGATTGTGTTGT+AGG - chr5_3:46867530-46867549 Msa0814630:five_prime_UTR 25.0%
!! AGAAGAATGAATGATTTGGT+TGG + chr5_3:46862287-46862306 None:intergenic 30.0%
TGGAAGAAGAATGAATGATT+TGG + chr5_3:46862291-46862310 None:intergenic 30.0%
!!! TCTTCAACTTTTTTCGTTTC+TGG - chr5_3:46862362-46862381 Msa0814630:three_prime_UTR 30.0%
!!! CTTCAACTTTTTTCGTTTCT+GGG - chr5_3:46862363-46862382 Msa0814630:three_prime_UTR 30.0%
!! TGATTTGTTGTGTTTATGGA+TGG - chr5_3:46862653-46862672 Msa0814630:intron 30.0%
AAAATAACCTATAGCATGCT+TGG - chr5_3:46862757-46862776 Msa0814630:intron 30.0%
! GGATAAGGAAATTGTGATTT+TGG - chr5_3:46862804-46862823 Msa0814630:intron 30.0%
! TGATAATGCGTTATTGATTG+TGG - chr5_3:46862834-46862853 Msa0814630:intron 30.0%
! ATAGGTAGAATCCCATTTTA+TGG + chr5_3:46863278-46863297 None:intergenic 30.0%
GAATTCAAACCTAGTATTTC+AGG + chr5_3:46863544-46863563 None:intergenic 30.0%
AAAATGAAAATATAACCCGG+GGG - chr5_3:46863589-46863608 Msa0814630:intron 30.0%
TAGAATCAACGTTAATCCAA+TGG + chr5_3:46863663-46863682 None:intergenic 30.0%
!! GGATTAACGTTGATTCTATT+TGG - chr5_3:46863665-46863684 Msa0814630:intron 30.0%
!! TAACGTTGATTCTATTTGGA+AGG - chr5_3:46863669-46863688 Msa0814630:intron 30.0%
TGTCTGTAATCAATTGTTTG+TGG - chr5_3:46863862-46863881 Msa0814630:intron 30.0%
! TAGTTGATACGTACATTTGT+TGG - chr5_3:46863901-46863920 Msa0814630:intron 30.0%
! TACGTACATTTGTTGGAATT+TGG - chr5_3:46863908-46863927 Msa0814630:intron 30.0%
GTGACTGTGAACTTATTATT+TGG - chr5_3:46864558-46864577 Msa0814630:intron 30.0%
GAAGTTGTCTTCTTTGTAAA+AGG - chr5_3:46865034-46865053 Msa0814630:intron 30.0%
TCTTCTTTGTAAAAGGCAAA+TGG - chr5_3:46865041-46865060 Msa0814630:intron 30.0%
!! CTTGTTTTTCTCTTTTGTTG+TGG - chr5_3:46865092-46865111 Msa0814630:intron 30.0%
!!! TTTTGTTGACTTAGTTTCCT+AGG - chr5_3:46865118-46865137 Msa0814630:intron 30.0%
GAAAAATACAAGAGTGGATA+AGG + chr5_3:46865257-46865276 None:intergenic 30.0%
! AGATTAAGAGTAGAGTACTA+TGG - chr5_3:46865412-46865431 Msa0814630:intron 30.0%
! GATTAAGAGTAGAGTACTAT+GGG - chr5_3:46865413-46865432 Msa0814630:intron 30.0%
!!! GGTTTTTTCCTTTTCATGAT+TGG - chr5_3:46865458-46865477 Msa0814630:CDS 30.0%
! CTTTTCGTAAACTCTATTAG+TGG + chr5_3:46865527-46865546 None:intergenic 30.0%
CTAATAGAGTTTACGAAAAG+AGG - chr5_3:46865527-46865546 Msa0814630:CDS 30.0%
TCTAACAATCACTCTCTTAT+TGG - chr5_3:46865570-46865589 Msa0814630:intron 30.0%
CTAACAATCACTCTCTTATT+GGG - chr5_3:46865571-46865590 Msa0814630:intron 30.0%
CTTATTGAATAAAATCCACG+TGG + chr5_3:46865653-46865672 None:intergenic 30.0%
TCTAAGTATAGATCTAGACA+TGG - chr5_3:46866007-46866026 Msa0814630:intron 30.0%
TGCTAAGAAAAGTGGAAATT+AGG - chr5_3:46866105-46866124 Msa0814630:intron 30.0%
TTGTTTAGATACAGAGGAAA+TGG - chr5_3:46866194-46866213 Msa0814630:intron 30.0%
! TTTGTTGGTTGAACAGAAAA+TGG - chr5_3:46866240-46866259 Msa0814630:intron 30.0%
TCAAAACTCAGAAATTGTGA+AGG + chr5_3:46866284-46866303 None:intergenic 30.0%
!! TCACAATTTCTGAGTTTTGA+AGG - chr5_3:46866284-46866303 Msa0814630:intron 30.0%
ATTAATATACACCGTTAAGG+TGG + chr5_3:46866343-46866362 None:intergenic 30.0%
AGTAGGTTATGATTATTGCA+AGG + chr5_3:46866382-46866401 None:intergenic 30.0%
GATAGAAAAGGATAAGACAT+GGG + chr5_3:46866417-46866436 None:intergenic 30.0%
!!! CCTATTTTTATCTGTTTTGG+CGG - chr5_3:46866442-46866461 Msa0814630:intron 30.0%
!!! CTATTTTTATCTGTTTTGGC+GGG - chr5_3:46866443-46866462 Msa0814630:intron 30.0%
!! TTCTCGTAGATTTTTGTTTC+GGG - chr5_3:46866486-46866505 Msa0814630:intron 30.0%
AGATAGCTATAAAAACAGAC+TGG + chr5_3:46866574-46866593 None:intergenic 30.0%
AGAAAATCCTACTGTAAGTT+GGG + chr5_3:46866663-46866682 None:intergenic 30.0%
TAGAAAATCCTACTGTAAGT+TGG + chr5_3:46866664-46866683 None:intergenic 30.0%
GTAATATCAAACCTTGGAAA+TGG + chr5_3:46866898-46866917 None:intergenic 30.0%
CATTATCTATGTTCAGTAAG+TGG + chr5_3:46866940-46866959 None:intergenic 30.0%
! TGTCGTAGTATATTTTCAGT+TGG - chr5_3:46867018-46867037 Msa0814630:intron 30.0%
! GTCGTAGTATATTTTCAGTT+GGG - chr5_3:46867019-46867038 Msa0814630:intron 30.0%
ACTTGCACCAAAATTATAAC+CGG + chr5_3:46867065-46867084 None:intergenic 30.0%
! GGTGCAAGTTTTACTTATAA+AGG - chr5_3:46867076-46867095 Msa0814630:intron 30.0%
ATGCCATCTTTATTGTTTAG+TGG - chr5_3:46867372-46867391 Msa0814630:intron 30.0%
GTTCCACTAAACAATAAAGA+TGG + chr5_3:46867378-46867397 None:intergenic 30.0%
TTCACAATTGATAAATGGGT+GGG + chr5_3:46867418-46867437 None:intergenic 30.0%
ATTCACAATTGATAAATGGG+TGG + chr5_3:46867419-46867438 None:intergenic 30.0%
CTAGGAAATGGCTTATTATT+TGG - chr5_3:46867517-46867536 Msa0814630:five_prime_UTR 30.0%
!! TGAATGATTTGGTTGGAGAA+GGG + chr5_3:46862280-46862299 None:intergenic 35.0%
!! ATGAATGATTTGGTTGGAGA+AGG + chr5_3:46862281-46862300 None:intergenic 35.0%
AGGAGAAGAAAAACAAACCT+GGG + chr5_3:46862323-46862342 None:intergenic 35.0%
AAGGAGAAGAAAAACAAACC+TGG + chr5_3:46862324-46862343 None:intergenic 35.0%
TCAACCGTGTCATGTATTAT+GGG - chr5_3:46863135-46863154 Msa0814630:intron 35.0%
! TCTAAAACCAATGCACACAA+AGG + chr5_3:46863376-46863395 None:intergenic 35.0%
!!! TTGTGTGCATTGGTTTTAGA+TGG - chr5_3:46863376-46863395 Msa0814630:intron 35.0%
!!! TGCATTGGTTTTAGATGGTT+AGG - chr5_3:46863381-46863400 Msa0814630:intron 35.0%
GTTCATTCCAGTGACTAATT+TGG - chr5_3:46863836-46863855 Msa0814630:intron 35.0%
AATCAATTGTTTGTGGAGCT+TGG - chr5_3:46863869-46863888 Msa0814630:intron 35.0%
ATCAATTGTTTGTGGAGCTT+GGG - chr5_3:46863870-46863889 Msa0814630:intron 35.0%
AAGGGAACTTATTAGAAGAG+AGG + chr5_3:46864046-46864065 None:intergenic 35.0%
GAGGAAAATGAATTGAAACC+AGG + chr5_3:46864302-46864321 None:intergenic 35.0%
CTAATGTGAGTAATGAAGCA+GGG + chr5_3:46864359-46864378 None:intergenic 35.0%
! TCTTGTATTGTCGTGCTTTT+TGG - chr5_3:46864381-46864400 Msa0814630:intron 35.0%
AAGAACATGTTGAATGAGAG+AGG + chr5_3:46864448-46864467 None:intergenic 35.0%
TGGTCTTCTTCATTCTTAAG+CGG - chr5_3:46864578-46864597 Msa0814630:intron 35.0%
TGTAAGCATTTGTGCAAAAC+AGG + chr5_3:46864835-46864854 None:intergenic 35.0%
AAACTATTTGAGTACCCTTC+TGG + chr5_3:46865001-46865020 None:intergenic 35.0%
GTAAAAGGCAAATGGAAGTA+TGG - chr5_3:46865049-46865068 Msa0814630:intron 35.0%
!!! TTAGTTTCCTAGGAGCATTT+TGG - chr5_3:46865128-46865147 Msa0814630:intron 35.0%
!!! TAGTTTCCTAGGAGCATTTT+GGG - chr5_3:46865129-46865148 Msa0814630:intron 35.0%
AAAAGAAACCACATAGGGAT+GGG + chr5_3:46865226-46865245 None:intergenic 35.0%
CCTTCAAAAGAAACCACATA+GGG + chr5_3:46865231-46865250 None:intergenic 35.0%
TCCTTCAAAAGAAACCACAT+AGG + chr5_3:46865232-46865251 None:intergenic 35.0%
ACAGAGGAAAAATACAAGAG+TGG + chr5_3:46865263-46865282 None:intergenic 35.0%
TTCCTCTGTATTTCATGATG+CGG - chr5_3:46865274-46865293 Msa0814630:intron 35.0%
!!! AGGACATCAGAAGTTTTTTG+TGG - chr5_3:46865297-46865316 Msa0814630:intron 35.0%
!!! GGACATCAGAAGTTTTTTGT+GGG - chr5_3:46865298-46865317 Msa0814630:intron 35.0%
AGTACTCTACTCTTAATCTG+TGG + chr5_3:46865411-46865430 None:intergenic 35.0%
! TGGATTTCTCAGTCCATTTT+AGG - chr5_3:46865492-46865511 Msa0814630:CDS 35.0%
! TAGATCTAGACATGGTTCTA+TGG - chr5_3:46866015-46866034 Msa0814630:intron 35.0%
! AGATCTAGACATGGTTCTAT+GGG - chr5_3:46866016-46866035 Msa0814630:intron 35.0%
TTAGGATGCAAGAGGAAAAT+AGG - chr5_3:46866123-46866142 Msa0814630:intron 35.0%
AGCAAAATAGAGAGAAGAGA+GGG - chr5_3:46866149-46866168 Msa0814630:intron 35.0%
! TTCAATCGTCTCTGATTTGT+TGG - chr5_3:46866225-46866244 Msa0814630:intron 35.0%
TTGGTTGAACAGAAAATGGA+TGG - chr5_3:46866244-46866263 Msa0814630:intron 35.0%
AAATGGATGGATGAGGAAAA+TGG - chr5_3:46866257-46866276 Msa0814630:intron 35.0%
GGGATTAATATACACCGTTA+AGG + chr5_3:46866346-46866365 None:intergenic 35.0%
ATGGGAGAAACAAAAACAGT+AGG + chr5_3:46866399-46866418 None:intergenic 35.0%
CGATAGAAAAGGATAAGACA+TGG + chr5_3:46866418-46866437 None:intergenic 35.0%
! TGTCTTATCCTTTTCTATCG+AGG - chr5_3:46866418-46866437 Msa0814630:intron 35.0%
! GTCTTATCCTTTTCTATCGA+GGG - chr5_3:46866419-46866438 Msa0814630:intron 35.0%
!!! GGGCCTATTTTTATCTGTTT+TGG - chr5_3:46866439-46866458 Msa0814630:intron 35.0%
CCGCCAAAACAGATAAAAAT+AGG + chr5_3:46866445-46866464 None:intergenic 35.0%
!! TCTCGTAGATTTTTGTTTCG+GGG - chr5_3:46866487-46866506 Msa0814630:intron 35.0%
!!! AAACTACTGCTGTTTTACTG+TGG - chr5_3:46866700-46866719 Msa0814630:intron 35.0%
! GTTTTACTGTGGTAGTAAGT+TGG - chr5_3:46866711-46866730 Msa0814630:intron 35.0%
TGCCATTACTGTTGATGTTT+GGG + chr5_3:46866830-46866849 None:intergenic 35.0%
TATATGTCTCGACATTCTGA+AGG - chr5_3:46866851-46866870 Msa0814630:intron 35.0%
AGCAGAGTAATATCAAACCT+TGG + chr5_3:46866904-46866923 None:intergenic 35.0%
AATTATAACCGGCTAATGCT+CGG + chr5_3:46867054-46867073 None:intergenic 35.0%
! GCATTAGCCGGTTATAATTT+TGG - chr5_3:46867055-46867074 Msa0814630:intron 35.0%
!! ATAGAGGGATTAGTTTCTCT+GGG + chr5_3:46867121-46867140 None:intergenic 35.0%
!! AATAGAGGGATTAGTTTCTC+TGG + chr5_3:46867122-46867141 None:intergenic 35.0%
ACAACGAGCAAATTGACAAA+AGG + chr5_3:46867151-46867170 None:intergenic 35.0%
TTGTACATGTGTGCAATTTC+AGG + chr5_3:46867206-46867225 None:intergenic 35.0%
!! TTGTAAGACACTTGTTATCG+AGG - chr5_3:46867445-46867464 Msa0814630:intron 35.0%
TAATAAGCCATTTCCTAGCT+AGG + chr5_3:46867515-46867534 None:intergenic 35.0%
GAAGAAAAACAAACCTGGGT+CGG + chr5_3:46862319-46862338 None:intergenic 40.0%
!!! GGATCCGAGGTTTTAAATAG+CGG - chr5_3:46862778-46862797 Msa0814630:intron 40.0%
TTTAAATAGCGGTCGGGATA+AGG - chr5_3:46862789-46862808 Msa0814630:intron 40.0%
TCAAATAGGCCATCTATTGC+AGG + chr5_3:46862923-46862942 None:intergenic 40.0%
! TATGCATTGGCATGCGTAAT+AGG - chr5_3:46863111-46863130 Msa0814630:intron 40.0%
! ATGCATTGGCATGCGTAATA+GGG - chr5_3:46863112-46863131 Msa0814630:intron 40.0%
GTCAACCGTGTCATGTATTA+TGG - chr5_3:46863134-46863153 Msa0814630:intron 40.0%
CGAAAACAGCTGCAACAAAA+CGG + chr5_3:46863302-46863321 None:intergenic 40.0%
!! TTTTGTTGCAGCTGTTTTCG+CGG - chr5_3:46863302-46863321 Msa0814630:intron 40.0%
!!! TGGTTTTAGATGGTTAGGTG+AGG - chr5_3:46863386-46863405 Msa0814630:intron 40.0%
!!! GGTTTTAGATGGTTAGGTGA+GGG - chr5_3:46863387-46863406 Msa0814630:intron 40.0%
AGGTGAGGGTTACATTATAG+CGG - chr5_3:46863401-46863420 Msa0814630:intron 40.0%
!! AGCTTGGTGGATTTCTTATG+AGG - chr5_3:46863427-46863446 Msa0814630:intron 40.0%
!! GCTTGGTGGATTTCTTATGA+GGG - chr5_3:46863428-46863447 Msa0814630:intron 40.0%
!! CTTGGTGGATTTCTTATGAG+GGG - chr5_3:46863429-46863448 Msa0814630:intron 40.0%
ACGTTAATCCAATGGTGTAG+TGG + chr5_3:46863655-46863674 None:intergenic 40.0%
ATAAATGTTTGAAGGGGCCA+TGG - chr5_3:46863772-46863791 Msa0814630:intron 40.0%
GACACATCCAAATTAGTCAC+TGG + chr5_3:46863846-46863865 None:intergenic 40.0%
TCAATTGTTTGTGGAGCTTG+GGG - chr5_3:46863871-46863890 Msa0814630:intron 40.0%
GTTGTTTATATCAGGTCCTG+TGG - chr5_3:46864206-46864225 Msa0814630:intron 40.0%
! AATACCTTTGGTGGCTTGAA+GGG + chr5_3:46864333-46864352 None:intergenic 40.0%
CCTAATGTGAGTAATGAAGC+AGG + chr5_3:46864360-46864379 None:intergenic 40.0%
CCTGCTTCATTACTCACATT+AGG - chr5_3:46864357-46864376 Msa0814630:intron 40.0%
!! GTACCGACATTTTCGATGAA+AGG - chr5_3:46864628-46864647 Msa0814630:intron 40.0%
ACGCCTTTCATCGAAAATGT+CGG + chr5_3:46864634-46864653 None:intergenic 40.0%
TTCACTGCAATCACATGTCT+CGG + chr5_3:46864671-46864690 None:intergenic 40.0%
AAGGACAAAGACATTGGACA+CGG + chr5_3:46864733-46864752 None:intergenic 40.0%
TGAAGCAAGGACAAAGACAT+TGG + chr5_3:46864739-46864758 None:intergenic 40.0%
TGTCTTTGTCCTTGCTTCAT+AGG - chr5_3:46864740-46864759 Msa0814630:intron 40.0%
GTCTTTGTCCTTGCTTCATA+GGG - chr5_3:46864741-46864760 Msa0814630:intron 40.0%
AGAGTGAAAACCCTTGACAT+CGG - chr5_3:46864859-46864878 Msa0814630:intron 40.0%
! GTTGAGGGGTAGAATACTTT+TGG - chr5_3:46864949-46864968 Msa0814630:intron 40.0%
! AGGGGTAGAATACTTTTGGT+GGG - chr5_3:46864953-46864972 Msa0814630:intron 40.0%
TAAATTTGAAGGGGCCAGAA+GGG - chr5_3:46864984-46865003 Msa0814630:intron 40.0%
! AAGGCAAATGGAAGTATGGT+TGG - chr5_3:46865053-46865072 Msa0814630:intron 40.0%
! AGGCAAATGGAAGTATGGTT+GGG - chr5_3:46865054-46865073 Msa0814630:intron 40.0%
!!! AGTTTCCTAGGAGCATTTTG+GGG - chr5_3:46865130-46865149 Msa0814630:intron 40.0%
TCCTTCTGATGTGTATGCTT+TGG - chr5_3:46865179-46865198 Msa0814630:intron 40.0%
CCTTCTGATGTGTATGCTTT+GGG - chr5_3:46865180-46865199 Msa0814630:intron 40.0%
CTTCTGATGTGTATGCTTTG+GGG - chr5_3:46865181-46865200 Msa0814630:intron 40.0%
TTCTGATGTGTATGCTTTGG+GGG - chr5_3:46865182-46865201 Msa0814630:intron 40.0%
AAAGAAACCACATAGGGATG+GGG + chr5_3:46865225-46865244 None:intergenic 40.0%
CAAAAGAAACCACATAGGGA+TGG + chr5_3:46865227-46865246 None:intergenic 40.0%
! CCCTATGTGGTTTCTTTTGA+AGG - chr5_3:46865228-46865247 Msa0814630:intron 40.0%
! TAGAGAGATAACTTGCGTCT+AGG - chr5_3:46865437-46865456 Msa0814630:intron 40.0%
GTGGACAACTTCTCCTAAAA+TGG + chr5_3:46865508-46865527 None:intergenic 40.0%
GAAATGGATCCCACATAAAG+TGG - chr5_3:46865621-46865640 Msa0814630:intron 40.0%
!! GAGTGTGAGAGAGTGTTATA+AGG - chr5_3:46865672-46865691 Msa0814630:intron 40.0%
TTATTCGTAAGCGAGAGTCT+TGG - chr5_3:46865896-46865915 Msa0814630:intron 40.0%
TGTTCAGCACAATCTCATCT+TGG - chr5_3:46866076-46866095 Msa0814630:intron 40.0%
GGTCACTATGCTAAGAAAAG+TGG - chr5_3:46866097-46866116 Msa0814630:intron 40.0%
AGTGGAAATTAGGATGCAAG+AGG - chr5_3:46866115-46866134 Msa0814630:intron 40.0%
GAGCAAAATAGAGAGAAGAG+AGG - chr5_3:46866148-46866167 Msa0814630:intron 40.0%
GAGAGAAGAGAGGGAAAAAT+AGG - chr5_3:46866158-46866177 Msa0814630:intron 40.0%
GAACAGAAAATGGATGGATG+AGG - chr5_3:46866250-46866269 Msa0814630:intron 40.0%
ATATACACCGTTAAGGTGGA+TGG + chr5_3:46866339-46866358 None:intergenic 40.0%
AAATAGGCCCTCGATAGAAA+AGG + chr5_3:46866429-46866448 None:intergenic 40.0%
!! AACAGACTGGATTAGCAATG+TGG + chr5_3:46866561-46866580 None:intergenic 40.0%
CTAATGTGCTTAACAACTGC+AGG - chr5_3:46866779-46866798 Msa0814630:intron 40.0%
!!! AACAACTGCAGGTTGCTTTT+AGG - chr5_3:46866790-46866809 Msa0814630:intron 40.0%
CATTACTGTTGATGTTTGGG+TGG + chr5_3:46866827-46866846 None:intergenic 40.0%
CACCCAAACATCAACAGTAA+TGG - chr5_3:46866825-46866844 Msa0814630:intron 40.0%
CTGCCATTACTGTTGATGTT+TGG + chr5_3:46866831-46866850 None:intergenic 40.0%
CCTTGGAAATGGTTAAAGCT+GGG + chr5_3:46866887-46866906 None:intergenic 40.0%
ACCTTGGAAATGGTTAAAGC+TGG + chr5_3:46866888-46866907 None:intergenic 40.0%
!! TAGAGGGATTAGTTTCTCTG+GGG + chr5_3:46867120-46867139 None:intergenic 40.0%
! GTCAATTTGCTCGTTGTTGA+CGG - chr5_3:46867154-46867173 Msa0814630:intron 40.0%
TTCAGGAACAAGTGGATCAT+CGG + chr5_3:46867189-46867208 None:intergenic 40.0%
TGTGCAATTTCAGGAACAAG+TGG + chr5_3:46867197-46867216 None:intergenic 40.0%
TGTTTAGTGGAACTTGAAGC+TGG - chr5_3:46867385-46867404 Msa0814630:intron 40.0%
! AATCTTTGTGCTTGTTGACC+TGG - chr5_3:46867485-46867504 Msa0814630:five_prime_UTR 40.0%
ATTTCCTAGCTAGGAATACC+AGG + chr5_3:46867506-46867525 None:intergenic 40.0%
TGGTATTCCTAGCTAGGAAA+TGG - chr5_3:46867505-46867524 Msa0814630:five_prime_UTR 40.0%
TTGGATTGTGTTGTAGGTCT+TGG - chr5_3:46867536-46867555 Msa0814630:five_prime_UTR 40.0%
ATTTGGTTGGAGAAGGGTGA+AGG + chr5_3:46862274-46862293 None:intergenic 45.0%
ACGAATCTTGAAGGAGCTCA+AGG - chr5_3:46862482-46862501 Msa0814630:three_prime_UTR 45.0%
AACCTGCACTGCATGAAGTT+GGG + chr5_3:46862524-46862543 None:intergenic 45.0%
AAACCTGCACTGCATGAAGT+TGG + chr5_3:46862525-46862544 None:intergenic 45.0%
! CCGACCGCTATTTAAAACCT+CGG + chr5_3:46862785-46862804 None:intergenic 45.0%
!!! CCGAGGTTTTAAATAGCGGT+CGG - chr5_3:46862782-46862801 Msa0814630:intron 45.0%
!!! CGAGGTTTTAAATAGCGGTC+GGG - chr5_3:46862783-46862802 Msa0814630:intron 45.0%
ATAGGCCATCTATTGCAGGA+CGG + chr5_3:46862919-46862938 None:intergenic 45.0%
CCGTCCCATAATACATGACA+CGG + chr5_3:46863142-46863161 None:intergenic 45.0%
CCGTGTCATGTATTATGGGA+CGG - chr5_3:46863139-46863158 Msa0814630:intron 45.0%
TGTCATGTATTATGGGACGG+AGG - chr5_3:46863142-46863161 Msa0814630:intron 45.0%
GTCATGTATTATGGGACGGA+GGG - chr5_3:46863143-46863162 Msa0814630:intron 45.0%
CAGCTGCAACAAAACGGTAT+AGG + chr5_3:46863296-46863315 None:intergenic 45.0%
TCTGCTTCCTTTGTGTGCAT+TGG - chr5_3:46863366-46863385 Msa0814630:intron 45.0%
TACATTATAGCGGCAGAGCT+TGG - chr5_3:46863411-46863430 Msa0814630:intron 45.0%
CTGATCTTGTATGAGACAGC+GGG + chr5_3:46863801-46863820 None:intergenic 45.0%
GCTGATCTTGTATGAGACAG+CGG + chr5_3:46863802-46863821 None:intergenic 45.0%
TCTCATACAAGATCAGCCAC+TGG - chr5_3:46863805-46863824 Msa0814630:intron 45.0%
CTCATACAAGATCAGCCACT+GGG - chr5_3:46863806-46863825 Msa0814630:intron 45.0%
GAATGAACAATCTCACCCAG+TGG + chr5_3:46863824-46863843 None:intergenic 45.0%
CAATTGTTTGTGGAGCTTGG+GGG - chr5_3:46863872-46863891 Msa0814630:intron 45.0%
! TCCATGCTTTTCCCTCTGAA+AGG - chr5_3:46864018-46864037 Msa0814630:intron 45.0%
GGAACACACCACCAGTATAT+GGG + chr5_3:46864281-46864300 None:intergenic 45.0%
AGGAACACACCACCAGTATA+TGG + chr5_3:46864282-46864301 None:intergenic 45.0%
! ATATACTGGTGGTGTGTTCC+TGG - chr5_3:46864281-46864300 Msa0814630:intron 45.0%
! GAATACCTTTGGTGGCTTGA+AGG + chr5_3:46864334-46864353 None:intergenic 45.0%
GAAGCAGGGTAGAATACCTT+TGG + chr5_3:46864345-46864364 None:intergenic 45.0%
TCTTCATTCTTAAGCGGTCG+TGG - chr5_3:46864584-46864603 Msa0814630:intron 45.0%
CGAAAATGTCGGTACTACAG+AGG + chr5_3:46864623-46864642 None:intergenic 45.0%
ATTCTCGACCCTATGAAGCA+AGG + chr5_3:46864752-46864771 None:intergenic 45.0%
CTGCTCGAATTGTTTCCAGT+TGG - chr5_3:46864798-46864817 Msa0814630:intron 45.0%
TCGAATTGTTTCCAGTTGGC+TGG - chr5_3:46864802-46864821 Msa0814630:intron 45.0%
! TTGTTTCCAGTTGGCTGGTT+TGG - chr5_3:46864807-46864826 Msa0814630:intron 45.0%
GAGTGAAAACCCTTGACATC+GGG - chr5_3:46864860-46864879 Msa0814630:intron 45.0%
AAAACCACACCCGATGTCAA+GGG + chr5_3:46864872-46864891 None:intergenic 45.0%
! GAGGGGTAGAATACTTTTGG+TGG - chr5_3:46864952-46864971 Msa0814630:intron 45.0%
! GGTAGAATACTTTTGGTGGG+TGG - chr5_3:46864956-46864975 Msa0814630:intron 45.0%
!! AGAATACTTTTGGTGGGTGG+CGG - chr5_3:46864959-46864978 Msa0814630:intron 45.0%
GTAAATTTGAAGGGGCCAGA+AGG - chr5_3:46864983-46865002 Msa0814630:intron 45.0%
CCCAAAGCATACACATCAGA+AGG + chr5_3:46865183-46865202 None:intergenic 45.0%
!!! TATGCTTTGGGGGTTTTCTG+TGG - chr5_3:46865192-46865211 Msa0814630:intron 45.0%
!!! ATGCTTTGGGGGTTTTCTGT+GGG - chr5_3:46865193-46865212 Msa0814630:intron 45.0%
AAGAAACCACATAGGGATGG+GGG + chr5_3:46865224-46865243 None:intergenic 45.0%
CTCCGCATCATGAAATACAG+AGG + chr5_3:46865279-46865298 None:intergenic 45.0%
CTCTGTATTTCATGATGCGG+AGG - chr5_3:46865277-46865296 Msa0814630:intron 45.0%
TTATGGGAGAAGACCCATCA+AGG - chr5_3:46865379-46865398 Msa0814630:intron 45.0%
! TCTGTGGTTGATGCCTTGAT+GGG + chr5_3:46865395-46865414 None:intergenic 45.0%
! ATCTGTGGTTGATGCCTTGA+TGG + chr5_3:46865396-46865415 None:intergenic 45.0%
CTTATTGGGTGAAACCCATG+TGG - chr5_3:46865585-46865604 Msa0814630:intron 45.0%
! TGGATCCCACACTTTGGAAA+TGG - chr5_3:46865605-46865624 Msa0814630:intron 45.0%
GGGATCCATTTCCAAAGTGT+GGG + chr5_3:46865613-46865632 None:intergenic 45.0%
TGGGATCCATTTCCAAAGTG+TGG + chr5_3:46865614-46865633 None:intergenic 45.0%
TGGGTCTCACCACTTTATGT+GGG + chr5_3:46865633-46865652 None:intergenic 45.0%
CACTTAGCCATCCACCTTAA+CGG - chr5_3:46866329-46866348 Msa0814630:intron 45.0%
!! CATGGTGGACTGTAAAAGAG+AGG + chr5_3:46866515-46866534 None:intergenic 45.0%
! TCGACATTCTGAAGGAACAG+TGG - chr5_3:46866859-46866878 Msa0814630:intron 45.0%
! CCCAGCTTTAACCATTTCCA+AGG - chr5_3:46866884-46866903 Msa0814630:intron 45.0%
!! AGAGGGATTAGTTTCTCTGG+GGG + chr5_3:46867119-46867138 None:intergenic 45.0%
TCAGGAACAAGTGGATCATC+GGG + chr5_3:46867188-46867207 None:intergenic 45.0%
ACACATGTACAAGACCGACA+GGG - chr5_3:46867214-46867233 Msa0814630:intron 45.0%
! TGGACACAGAAGTATGCCAT+GGG - chr5_3:46867263-46867282 Msa0814630:CDS 45.0%
GGACAAACATGATCATCCCA+TGG + chr5_3:46867282-46867301 None:intergenic 45.0%
GCTGCTCTTATTGAACAGCT+AGG + chr5_3:46867303-46867322 None:intergenic 45.0%
AGTGGAACTTGAAGCTGGTA+AGG - chr5_3:46867390-46867409 Msa0814630:intron 45.0%
GTGGAACTTGAAGCTGGTAA+GGG - chr5_3:46867391-46867410 Msa0814630:intron 45.0%
TTGACCTGGTATTCCTAGCT+AGG - chr5_3:46867499-46867518 Msa0814630:five_prime_UTR 45.0%
!!! ACAAATTTTTAATAAAAAAA+GGG + chr5_3:46862570-46862589 None:intergenic 5.0%
!!! AACAAATTTTTAATAAAAAA+AGG + chr5_3:46862571-46862590 None:intergenic 5.0%
!! ATATATAATCTTAAAATATT+TGG + chr5_3:46863456-46863475 None:intergenic 5.0%
! GGCGTCGAAACGAATCTTGA+AGG - chr5_3:46862473-46862492 Msa0814630:three_prime_UTR 50.0%
GGAGCTCAAGGATTTGCAGA+AGG - chr5_3:46862494-46862513 Msa0814630:exon 50.0%
ACCTGCACTGCATGAAGTTG+GGG + chr5_3:46862523-46862542 None:intergenic 50.0%
CTCGGATCCAAGCATGCTAT+AGG + chr5_3:46862767-46862786 None:intergenic 50.0%
CTATAGCATGCTTGGATCCG+AGG - chr5_3:46862765-46862784 Msa0814630:intron 50.0%
ATTATAGCGGCAGAGCTTGG+TGG - chr5_3:46863414-46863433 Msa0814630:intron 50.0%
GTCCTTCGAGCTGCAAAAGA+CGG - chr5_3:46863624-46863643 Msa0814630:intron 50.0%
GCCTTTCAGAGGGAAAAGCA+TGG + chr5_3:46864022-46864041 None:intergenic 50.0%
GAAGAGAGGAGCCTTTCAGA+GGG + chr5_3:46864032-46864051 None:intergenic 50.0%
AGAAGAGAGGAGCCTTTCAG+AGG + chr5_3:46864033-46864052 None:intergenic 50.0%
TATATCAGGTCCTGTGGCTG+AGG - chr5_3:46864212-46864231 Msa0814630:intron 50.0%
CACTGGCAAGCCACAATCAT+GGG - chr5_3:46864243-46864262 Msa0814630:intron 50.0%
! CCAGTATATGGGCTATCAGC+CGG + chr5_3:46864270-46864289 None:intergenic 50.0%
GCTGATAGCCCATATACTGG+TGG - chr5_3:46864270-46864289 Msa0814630:intron 50.0%
CTATCCCTTCAAGCCACCAA+AGG - chr5_3:46864326-46864345 Msa0814630:intron 50.0%
GCAGGGTAGAATACCTTTGG+TGG + chr5_3:46864342-46864361 None:intergenic 50.0%
AAAACCCTTGACATCGGGTG+TGG - chr5_3:46864865-46864884 Msa0814630:intron 50.0%
GAAAACCACACCCGATGTCA+AGG + chr5_3:46864873-46864892 None:intergenic 50.0%
! GGTGGCGGCGTAAATTTGAA+GGG - chr5_3:46864974-46864993 Msa0814630:intron 50.0%
GTGGCGGCGTAAATTTGAAG+GGG - chr5_3:46864975-46864994 Msa0814630:intron 50.0%
AACTGCCCCAAAATGCTCCT+AGG + chr5_3:46865138-46865157 None:intergenic 50.0%
!!! TGCTTTGGGGGTTTTCTGTG+GGG - chr5_3:46865194-46865213 Msa0814630:intron 50.0%
AGAAACCACATAGGGATGGG+GGG + chr5_3:46865223-46865242 None:intergenic 50.0%
CCAAAGTGTGGGATCCACAT+GGG + chr5_3:46865602-46865621 None:intergenic 50.0%
TCCAAAGTGTGGGATCCACA+TGG + chr5_3:46865603-46865622 None:intergenic 50.0%
GTGGGTCTCACCACTTTATG+TGG + chr5_3:46865634-46865653 None:intergenic 50.0%
ATAAAGTGGTGAGACCCACG+TGG - chr5_3:46865635-46865654 Msa0814630:intron 50.0%
CGTTAAGGTGGATGGCTAAG+TGG + chr5_3:46866331-46866350 None:intergenic 50.0%
TTGCAAGGTAGCTAGCGAGA+GGG + chr5_3:46866367-46866386 None:intergenic 50.0%
ATTGCAAGGTAGCTAGCGAG+AGG + chr5_3:46866368-46866387 None:intergenic 50.0%
CAGTCCACCATGTTCTTGCA+TGG - chr5_3:46866523-46866542 Msa0814630:intron 50.0%
AGGTCCATGCAAGAACATGG+TGG + chr5_3:46866530-46866549 None:intergenic 50.0%
CACAGGTCCATGCAAGAACA+TGG + chr5_3:46866533-46866552 None:intergenic 50.0%
TTCTTGCATGGACCTGTGCT+CGG - chr5_3:46866535-46866554 Msa0814630:intron 50.0%
AGCAGCACCCAACTTACAGT+AGG - chr5_3:46866653-46866672 Msa0814630:intron 50.0%
!!! GCAGGTTGCTTTTAGGACCA+AGG - chr5_3:46866797-46866816 Msa0814630:intron 50.0%
GATGTTTGGGTGGAACACCT+TGG + chr5_3:46866817-46866836 None:intergenic 50.0%
TGTGATAGCCGAGCATTAGC+CGG - chr5_3:46867043-46867062 Msa0814630:intron 50.0%
!! GAGGGATTAGTTTCTCTGGG+GGG + chr5_3:46867118-46867137 None:intergenic 50.0%
ACAAGTGGATCATCGGGGTT+GGG + chr5_3:46867182-46867201 None:intergenic 50.0%
AACAAGTGGATCATCGGGGT+TGG + chr5_3:46867183-46867202 None:intergenic 50.0%
CAGGAACAAGTGGATCATCG+GGG + chr5_3:46867187-46867206 None:intergenic 50.0%
CACACATGTACAAGACCGAC+AGG - chr5_3:46867213-46867232 Msa0814630:intron 50.0%
! CTGGACACAGAAGTATGCCA+TGG - chr5_3:46867262-46867281 Msa0814630:CDS 50.0%
TGGTTGGAGAAGGGTGAAGG+AGG + chr5_3:46862271-46862290 None:intergenic 55.0%
CTGCACTGCATGAAGTTGGG+GGG + chr5_3:46862521-46862540 None:intergenic 55.0%
CCTGCACTGCATGAAGTTGG+GGG + chr5_3:46862522-46862541 None:intergenic 55.0%
TCCCTCCGTCCTGCAATAGA+TGG - chr5_3:46862911-46862930 Msa0814630:CDS 55.0%
GCCATCTATTGCAGGACGGA+GGG + chr5_3:46862915-46862934 None:intergenic 55.0%
GACACAAGTTTGACTCCCCC+GGG + chr5_3:46863607-46863626 None:intergenic 55.0%
GGACACAAGTTTGACTCCCC+CGG + chr5_3:46863608-46863627 None:intergenic 55.0%
! GACCGTCTTTTGCAGCTCGA+AGG + chr5_3:46863629-46863648 None:intergenic 55.0%
CGGTCTTGCCACTACACCAT+TGG - chr5_3:46863644-46863663 Msa0814630:intron 55.0%
TATGAGACAGCGGGAAGCCA+TGG + chr5_3:46863792-46863811 None:intergenic 55.0%
TGGAACATGTCCTCAGCCAC+AGG + chr5_3:46864225-46864244 None:intergenic 55.0%
TGGCTGAGGACATGTTCCAC+TGG - chr5_3:46864226-46864245 Msa0814630:intron 55.0%
! CCATGATTGTGGCTTGCCAG+TGG + chr5_3:46864245-46864264 None:intergenic 55.0%
CCACTGGCAAGCCACAATCA+TGG - chr5_3:46864242-46864261 Msa0814630:intron 55.0%
GCAAGCCACAATCATGGGAC+CGG - chr5_3:46864248-46864267 Msa0814630:intron 55.0%
ATCAGCCGGTCCCATGATTG+TGG + chr5_3:46864256-46864275 None:intergenic 55.0%
CCGGCTGATAGCCCATATAC+TGG - chr5_3:46864267-46864286 Msa0814630:intron 55.0%
GGCTTGAAGGGATAGTCAGG+AGG + chr5_3:46864321-46864340 None:intergenic 55.0%
GGTGGCTTGAAGGGATAGTC+AGG + chr5_3:46864324-46864343 None:intergenic 55.0%
CAGGATCCAAACCAGCCAAC+TGG + chr5_3:46864816-46864835 None:intergenic 55.0%
! GGGTGGCGGCGTAAATTTGA+AGG - chr5_3:46864973-46864992 Msa0814630:intron 55.0%
!!! GGAGCATTTTGGGGCAGTTG+TGG - chr5_3:46865139-46865158 Msa0814630:intron 55.0%
!!! GCATTTTGGGGCAGTTGTGG+TGG - chr5_3:46865142-46865161 Msa0814630:intron 55.0%
CCCATGTGGATCCCACACTT+TGG - chr5_3:46865599-46865618 Msa0814630:intron 55.0%
TGCAAGGTAGCTAGCGAGAG+GGG + chr5_3:46866366-46866385 None:intergenic 55.0%
TTAGCAATGTGGCCGAGCAC+AGG + chr5_3:46866550-46866569 None:intergenic 55.0%
CAAGTGGATCATCGGGGTTG+GGG + chr5_3:46867181-46867200 None:intergenic 55.0%
GGCTTCATACTTGGCCCTGT+CGG + chr5_3:46867231-46867250 None:intergenic 55.0%
GCGAGCTGTGGCTTCATACT+TGG + chr5_3:46867240-46867259 None:intergenic 55.0%
TTCTTCCACGCTTCCGACCC+AGG - chr5_3:46862303-46862322 Msa0814630:three_prime_UTR 60.0%
ACAAACCTGGGTCGGAAGCG+TGG + chr5_3:46862311-46862330 None:intergenic 60.0%
CCCCCAACTTCATGCAGTGC+AGG - chr5_3:46862519-46862538 Msa0814630:CDS 60.0%
GGCCATCTATTGCAGGACGG+AGG + chr5_3:46862916-46862935 None:intergenic 60.0%
GGTTTCCCCCCATCCCTATG+TGG - chr5_3:46865215-46865234 Msa0814630:intron 60.0%
ATGAAGCCACAGCTCGCAGC+TGG - chr5_3:46867243-46867262 Msa0814630:intron 60.0%
CTGTGTCCAGCTGCGAGCTG+TGG + chr5_3:46867252-46867271 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 46862146 46867651 46862146 ID=Msa0814630;Name=Msa0814630
chr5_3 mRNA 46862146 46867651 46862146 ID=Msa0814630-mRNA-1;Parent=Msa0814630;Name=Msa0814630-mRNA-1;_AED=0.10;_eAED=0.10;_QI=190|1|1|1|0.75|0.6|5|362|148
chr5_3 exon 46862146 46862651 46862146 ID=Msa0814630-mRNA-1:exon:14192;Parent=Msa0814630-mRNA-1
chr5_3 exon 46862892 46862996 46862892 ID=Msa0814630-mRNA-1:exon:14191;Parent=Msa0814630-mRNA-1
chr5_3 exon 46865450 46865577 46865450 ID=Msa0814630-mRNA-1:exon:14190;Parent=Msa0814630-mRNA-1
chr5_3 exon 46867257 46867337 46867257 ID=Msa0814630-mRNA-1:exon:14189;Parent=Msa0814630-mRNA-1
chr5_3 exon 46867473 46867651 46867473 ID=Msa0814630-mRNA-1:exon:14188;Parent=Msa0814630-mRNA-1
chr5_3 five_prime_UTR 46867473 46867651 46867473 ID=Msa0814630-mRNA-1:five_prime_utr;Parent=Msa0814630-mRNA-1
chr5_3 five_prime_UTR 46867327 46867337 46867327 ID=Msa0814630-mRNA-1:five_prime_utr;Parent=Msa0814630-mRNA-1
chr5_3 CDS 46867257 46867326 46867257 ID=Msa0814630-mRNA-1:cds;Parent=Msa0814630-mRNA-1
chr5_3 CDS 46865450 46865577 46865450 ID=Msa0814630-mRNA-1:cds;Parent=Msa0814630-mRNA-1
chr5_3 CDS 46862892 46862996 46862892 ID=Msa0814630-mRNA-1:cds;Parent=Msa0814630-mRNA-1
chr5_3 CDS 46862508 46862651 46862508 ID=Msa0814630-mRNA-1:cds;Parent=Msa0814630-mRNA-1
chr5_3 three_prime_UTR 46862146 46862507 46862146 ID=Msa0814630-mRNA-1:three_prime_utr;Parent=Msa0814630-mRNA-1
Gene Sequence

>Msa0814630

ATGGCGTCGAAACGAATCTTGAAGGAGCTCAAGGATTTGCAGAAGGACCCCCCAACTTCATGCAGTGCAGGTCCTGTGGCTGAGGACATGTTCCACTGGCAAGCCACAATCATGGGACCGGCTGATAGCCCATATACTGGTGGTGTGTTCCTGGTTTCAATTCATTTTCCTCCTGACTATCCCTTCAAGCCACCAAAGGTTGCTTTTAGGACCAAGGTGTTCCACCCAAACATCAACAGTAATGGCAGTATATGTCTCGACATTCTGAAGGAACAGTGGAGCCCAGCTTTAACCATTTCCAAGGTCCTTTTGTCAATTTGCTCGTTGTTGACGGACCCCAACCCCGATGATCCACTTGTTCCTGAAATTGCACACATGTACAAGACCGACAGGGCCAAGTATGAAGCCACAGCTCGCAGCTGGACACAGAAGTATGCCATGGGATGA
Protein sequence

>Msa0814630

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYTGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARSWTQKYAMG*