Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173900 | XP_013444870.1 | 96.040 | 202 | 6 | 1 | 1 | 202 | 1 | 200 | 5.01e-127 | 366 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173900 | sp|P93788|REMO_SOLTU | 57.895 | 209 | 70 | 5 | 1 | 202 | 1 | 198 | 8.72e-68 | 209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004060 | Msa1173900 | 0.811005 | 8.691763e-51 | -8.615850e-47 |
| Msa0004540 | Msa1173900 | 0.827482 | 1.527240e-54 | -8.615850e-47 |
| Msa0006880 | Msa1173900 | 0.806822 | 6.824460e-50 | -8.615850e-47 |
| Msa0007850 | Msa1173900 | 0.806163 | 9.399809e-50 | -8.615850e-47 |
| Msa0008840 | Msa1173900 | 0.811205 | 7.863760e-51 | -8.615850e-47 |
| Msa0026150 | Msa1173900 | 0.816663 | 4.923674e-52 | -8.615850e-47 |
| Msa0026660 | Msa1173900 | 0.820521 | 6.564878e-53 | -8.615850e-47 |
| Msa0027580 | Msa1173900 | 0.817035 | 4.063455e-52 | -8.615850e-47 |
| Msa0030280 | Msa1173900 | 0.800989 | 1.112734e-48 | -8.615850e-47 |
| Msa0033880 | Msa1173900 | 0.825675 | 4.118380e-54 | -8.615850e-47 |
| Msa0036540 | Msa1173900 | 0.808256 | 3.387030e-50 | -8.615850e-47 |
| Msa0047280 | Msa1173900 | 0.811727 | 6.058747e-51 | -8.615850e-47 |
| Msa0052610 | Msa1173900 | 0.817178 | 3.772362e-52 | -8.615850e-47 |
| Msa0055100 | Msa1173900 | 0.829786 | 4.235285e-55 | -8.615850e-47 |
| Msa0057610 | Msa1173900 | 0.801007 | 1.102882e-48 | -8.615850e-47 |
| Msa0057710 | Msa1173900 | 0.801460 | 8.912949e-49 | -8.615850e-47 |
| Msa0065010 | Msa1173900 | 0.802684 | 4.991215e-49 | -8.615850e-47 |
| Msa0069600 | Msa1173900 | 0.804555 | 2.041792e-49 | -8.615850e-47 |
| Msa0070430 | Msa1173900 | 0.815116 | 1.090080e-51 | -8.615850e-47 |
| Msa0070960 | Msa1173900 | 0.806502 | 7.974326e-50 | -8.615850e-47 |
| Msa0072170 | Msa1173900 | 0.806215 | 9.167308e-50 | -8.615850e-47 |
| Msa0075340 | Msa1173900 | 0.817342 | 3.465499e-52 | -8.615850e-47 |
| Msa0077900 | Msa1173900 | 0.808054 | 3.739023e-50 | -8.615850e-47 |
| Msa0081210 | Msa1173900 | 0.804403 | 2.197017e-49 | -8.615850e-47 |
| Msa0087670 | Msa1173900 | 0.808194 | 3.492006e-50 | -8.615850e-47 |
| Msa0094010 | Msa1173900 | 0.806731 | 7.133277e-50 | -8.615850e-47 |
| Msa0097950 | Msa1173900 | 0.824735 | 6.869646e-54 | -8.615850e-47 |
| Msa0100800 | Msa1173900 | 0.826071 | 3.317103e-54 | -8.615850e-47 |
| Msa0101180 | Msa1173900 | 0.839884 | 1.212710e-57 | -8.615850e-47 |
| Msa0103790 | Msa1173900 | 0.809373 | 1.953658e-50 | -8.615850e-47 |
| Msa0105520 | Msa1173900 | 0.807938 | 3.958266e-50 | -8.615850e-47 |
| Msa0108870 | Msa1173900 | 0.815427 | 9.296137e-52 | -8.615850e-47 |
| Msa0115370 | Msa1173900 | 0.814655 | 1.379489e-51 | -8.615850e-47 |
| Msa0118000 | Msa1173900 | 0.800103 | 1.686151e-48 | -8.615850e-47 |
| Msa0120540 | Msa1173900 | 0.800754 | 1.242361e-48 | -8.615850e-47 |
| Msa0606810 | Msa1173900 | 0.835818 | 1.344352e-56 | -8.615850e-47 |
| Msa0609000 | Msa1173900 | 0.818881 | 1.555485e-52 | -8.615850e-47 |
| Msa0609220 | Msa1173900 | 0.829706 | 4.431103e-55 | -8.615850e-47 |
| Msa0610090 | Msa1173900 | 0.812926 | 3.315857e-51 | -8.615850e-47 |
| Msa0615580 | Msa1173900 | 0.809988 | 1.441120e-50 | -8.615850e-47 |
| Msa0615660 | Msa1173900 | 0.808188 | 3.502004e-50 | -8.615850e-47 |
| Msa0615680 | Msa1173900 | 0.864325 | 1.318470e-64 | -8.615850e-47 |
| Msa0617770 | Msa1173900 | -0.800021 | 1.752187e-48 | -8.615850e-47 |
| Msa0618930 | Msa1173900 | 0.837407 | 5.295282e-57 | -8.615850e-47 |
| Msa0619920 | Msa1173900 | 0.808460 | 3.064018e-50 | -8.615850e-47 |
| Msa0626680 | Msa1173900 | 0.815984 | 6.986542e-52 | -8.615850e-47 |
| Msa0644030 | Msa1173900 | 0.839519 | 1.509478e-57 | -8.615850e-47 |
| Msa0658480 | Msa1173900 | 0.828754 | 7.539656e-55 | -8.615850e-47 |
| Msa0659990 | Msa1173900 | 0.819294 | 1.252695e-52 | -8.615850e-47 |
| Msa0662630 | Msa1173900 | 0.822283 | 2.572856e-53 | -8.615850e-47 |
| Msa0664760 | Msa1173900 | 0.826173 | 3.137513e-54 | -8.615850e-47 |
| Msa0666230 | Msa1173900 | 0.809839 | 1.551309e-50 | -8.615850e-47 |
| Msa0669720 | Msa1173900 | 0.821968 | 3.045250e-53 | -8.615850e-47 |
| Msa0669760 | Msa1173900 | 0.803121 | 4.055579e-49 | -8.615850e-47 |
| Msa0673270 | Msa1173900 | 0.804057 | 2.593570e-49 | -8.615850e-47 |
| Msa0679100 | Msa1173900 | 0.810591 | 1.068258e-50 | -8.615850e-47 |
| Msa0683140 | Msa1173900 | 0.802799 | 4.726007e-49 | -8.615850e-47 |
| Msa0683780 | Msa1173900 | 0.811909 | 5.528568e-51 | -8.615850e-47 |
| Msa0687230 | Msa1173900 | 0.862460 | 4.991000e-64 | -8.615850e-47 |
| Msa0694990 | Msa1173900 | 0.814946 | 1.189096e-51 | -8.615850e-47 |
| Msa0699190 | Msa1173900 | 0.811200 | 7.883354e-51 | -8.615850e-47 |
| Msa0702150 | Msa1173900 | 0.820251 | 7.572453e-53 | -8.615850e-47 |
| Msa0702270 | Msa1173900 | 0.829613 | 4.667708e-55 | -8.615850e-47 |
| Msa0712560 | Msa1173900 | 0.802517 | 5.404055e-49 | -8.615850e-47 |
| Msa0716410 | Msa1173900 | 0.820818 | 5.609319e-53 | -8.615850e-47 |
| Msa0716420 | Msa1173900 | -0.819615 | 1.058239e-52 | -8.615850e-47 |
| Msa0734960 | Msa1173900 | 0.818562 | 1.837426e-52 | -8.615850e-47 |
| Msa0744090 | Msa1173900 | 0.817385 | 3.389398e-52 | -8.615850e-47 |
| Msa0744100 | Msa1173900 | 0.841941 | 3.501479e-58 | -8.615850e-47 |
| Msa0748920 | Msa1173900 | 0.832261 | 1.045660e-55 | -8.615850e-47 |
| Msa0750250 | Msa1173900 | 0.808424 | 3.118546e-50 | -8.615850e-47 |
| Msa0751010 | Msa1173900 | 0.807563 | 4.755644e-50 | -8.615850e-47 |
| Msa0756930 | Msa1173900 | 0.832122 | 1.131701e-55 | -8.615850e-47 |
| Msa0758230 | Msa1173900 | 0.836833 | 7.423473e-57 | -8.615850e-47 |
| Msa0759860 | Msa1173900 | 0.800173 | 1.632102e-48 | -8.615850e-47 |
| Msa0781270 | Msa1173900 | 0.800116 | 1.675734e-48 | -8.615850e-47 |
| Msa0788110 | Msa1173900 | 0.805316 | 1.415579e-49 | -8.615850e-47 |
| Msa0791240 | Msa1173900 | 0.815629 | 8.382310e-52 | -8.615850e-47 |
| Msa0794050 | Msa1173900 | 0.837363 | 5.431601e-57 | -8.615850e-47 |
| Msa0798810 | Msa1173900 | -0.838224 | 3.265295e-57 | -8.615850e-47 |
| Msa0799000 | Msa1173900 | 0.804152 | 2.477464e-49 | -8.615850e-47 |
| Msa0799010 | Msa1173900 | -0.831936 | 1.258370e-55 | -8.615850e-47 |
| Msa0814630 | Msa1173900 | -0.818093 | 2.346166e-52 | -8.615850e-47 |
| Msa0818770 | Msa1173900 | 0.845912 | 3.020541e-59 | -8.615850e-47 |
| Msa0822170 | Msa1173900 | 0.828455 | 8.907502e-55 | -8.615850e-47 |
| Msa0825270 | Msa1173900 | 0.847004 | 1.520859e-59 | -8.615850e-47 |
| Msa0825280 | Msa1173900 | 0.820925 | 5.299972e-53 | -8.615850e-47 |
| Msa0826500 | Msa1173900 | 0.857233 | 1.876017e-62 | -8.615850e-47 |
| Msa0830390 | Msa1173900 | 0.801932 | 7.129807e-49 | -8.615850e-47 |
| Msa0833190 | Msa1173900 | -0.834377 | 3.104015e-56 | -8.615850e-47 |
| Msa0836500 | Msa1173900 | 0.828928 | 6.842614e-55 | -8.615850e-47 |
| Msa0121820 | Msa1173900 | 0.801145 | 1.033836e-48 | -8.615850e-47 |
| Msa0123510 | Msa1173900 | 0.819954 | 8.854041e-53 | -8.615850e-47 |
| Msa0126770 | Msa1173900 | 0.812751 | 3.621131e-51 | -8.615850e-47 |
| Msa0126880 | Msa1173900 | 0.830464 | 2.893784e-55 | -8.615850e-47 |
| Msa0127040 | Msa1173900 | 0.815825 | 7.579204e-52 | -8.615850e-47 |
| Msa0127850 | Msa1173900 | 0.828387 | 9.250732e-55 | -8.615850e-47 |
| Msa0136120 | Msa1173900 | 0.808418 | 3.127248e-50 | -8.615850e-47 |
| Msa0139990 | Msa1173900 | 0.805940 | 1.047243e-49 | -8.615850e-47 |
| Msa0140400 | Msa1173900 | 0.814977 | 1.170062e-51 | -8.615850e-47 |
| Msa0140620 | Msa1173900 | 0.809226 | 2.100906e-50 | -8.615850e-47 |
| Msa0142110 | Msa1173900 | 0.803734 | 3.026541e-49 | -8.615850e-47 |
| Msa0142410 | Msa1173900 | 0.806155 | 9.434319e-50 | -8.615850e-47 |
| Msa0145150 | Msa1173900 | 0.811584 | 6.506414e-51 | -8.615850e-47 |
| Msa0146080 | Msa1173900 | 0.812081 | 5.073104e-51 | -8.615850e-47 |
| Msa0147980 | Msa1173900 | 0.815776 | 7.772840e-52 | -8.615850e-47 |
| Msa0150260 | Msa1173900 | 0.824987 | 5.990893e-54 | -8.615850e-47 |
| Msa0152840 | Msa1173900 | 0.803440 | 3.482057e-49 | -8.615850e-47 |
| Msa0166750 | Msa1173900 | 0.829381 | 5.315419e-55 | -8.615850e-47 |
| Msa0167480 | Msa1173900 | 0.823986 | 1.030897e-53 | -8.615850e-47 |
| Msa0168090 | Msa1173900 | 0.803067 | 4.159495e-49 | -8.615850e-47 |
| Msa0171410 | Msa1173900 | 0.801974 | 6.989224e-49 | -8.615850e-47 |
| Msa0171850 | Msa1173900 | 0.808368 | 3.205621e-50 | -8.615850e-47 |
| Msa0174000 | Msa1173900 | 0.826839 | 2.175921e-54 | -8.615850e-47 |
| Msa0175200 | Msa1173900 | 0.803900 | 2.795152e-49 | -8.615850e-47 |
| Msa0177230 | Msa1173900 | 0.806010 | 1.012559e-49 | -8.615850e-47 |
| Msa0181000 | Msa1173900 | 0.806591 | 7.635166e-50 | -8.615850e-47 |
| Msa0181230 | Msa1173900 | 0.806672 | 7.342741e-50 | -8.615850e-47 |
| Msa0191080 | Msa1173900 | 0.803830 | 2.890915e-49 | -8.615850e-47 |
| Msa0192640 | Msa1173900 | 0.800934 | 1.141762e-48 | -8.615850e-47 |
| Msa0194560 | Msa1173900 | 0.813876 | 2.050089e-51 | -8.615850e-47 |
| Msa0197530 | Msa1173900 | 0.802979 | 4.337976e-49 | -8.615850e-47 |
| Msa0198520 | Msa1173900 | 0.802782 | 4.765508e-49 | -8.615850e-47 |
| Msa0198530 | Msa1173900 | 0.805603 | 1.232890e-49 | -8.615850e-47 |
| Msa0207350 | Msa1173900 | 0.802604 | 5.183806e-49 | -8.615850e-47 |
| Msa0219250 | Msa1173900 | -0.806933 | 6.466685e-50 | -8.615850e-47 |
| Msa0221600 | Msa1173900 | 0.831617 | 1.507773e-55 | -8.615850e-47 |
| Msa0226460 | Msa1173900 | 0.804069 | 2.578449e-49 | -8.615850e-47 |
| Msa0227310 | Msa1173900 | -0.812818 | 3.500806e-51 | -8.615850e-47 |
| Msa0229940 | Msa1173900 | 0.818688 | 1.720446e-52 | -8.615850e-47 |
| Msa0231100 | Msa1173900 | 0.812240 | 4.684316e-51 | -8.615850e-47 |
| Msa0233380 | Msa1173900 | 0.823895 | 1.082769e-53 | -8.615850e-47 |
| Msa0365860 | Msa1173900 | 0.839124 | 1.911580e-57 | -8.615850e-47 |
| Msa0370160 | Msa1173900 | -0.833745 | 4.470241e-56 | -8.615850e-47 |
| Msa0376280 | Msa1173900 | 0.800681 | 1.285753e-48 | -8.615850e-47 |
| Msa0384670 | Msa1173900 | 0.865485 | 5.708986e-65 | -8.615850e-47 |
| Msa0384880 | Msa1173900 | 0.805912 | 1.061370e-49 | -8.615850e-47 |
| Msa0387910 | Msa1173900 | 0.807477 | 4.958959e-50 | -8.615850e-47 |
| Msa0394690 | Msa1173900 | 0.813488 | 2.495429e-51 | -8.615850e-47 |
| Msa0405650 | Msa1173900 | 0.821181 | 4.627979e-53 | -8.615850e-47 |
| Msa0427860 | Msa1173900 | -0.815493 | 8.989272e-52 | -8.615850e-47 |
| Msa0431770 | Msa1173900 | 0.828852 | 7.139604e-55 | -8.615850e-47 |
| Msa0434570 | Msa1173900 | 0.841999 | 3.380129e-58 | -8.615850e-47 |
| Msa0434770 | Msa1173900 | 0.843507 | 1.343192e-58 | -8.615850e-47 |
| Msa0436200 | Msa1173900 | 0.853510 | 2.277883e-61 | -8.615850e-47 |
| Msa0437510 | Msa1173900 | 0.809980 | 1.446989e-50 | -8.615850e-47 |
| Msa0437690 | Msa1173900 | -0.828646 | 8.007507e-55 | -8.615850e-47 |
| Msa0439890 | Msa1173900 | 0.803306 | 3.713329e-49 | -8.615850e-47 |
| Msa0442310 | Msa1173900 | 0.815347 | 9.688057e-52 | -8.615850e-47 |
| Msa0443390 | Msa1173900 | 0.809162 | 2.168858e-50 | -8.615850e-47 |
| Msa0443430 | Msa1173900 | 0.820792 | 5.688454e-53 | -8.615850e-47 |
| Msa0467220 | Msa1173900 | 0.804650 | 1.951177e-49 | -8.615850e-47 |
| Msa0472720 | Msa1173900 | 0.800218 | 1.598043e-48 | -8.615850e-47 |
| Msa0474090 | Msa1173900 | -0.800866 | 1.178573e-48 | -8.615850e-47 |
| Msa0474700 | Msa1173900 | 0.812199 | 4.780173e-51 | -8.615850e-47 |
| Msa0478580 | Msa1173900 | 0.849628 | 2.862810e-60 | -8.615850e-47 |
| Msa0980940 | Msa1173900 | 0.818484 | 1.913968e-52 | -8.615850e-47 |
| Msa0981430 | Msa1173900 | 0.810089 | 1.370852e-50 | -8.615850e-47 |
| Msa0990590 | Msa1173900 | 0.806483 | 8.046747e-50 | -8.615850e-47 |
| Msa1002600 | Msa1173900 | -0.835078 | 2.068685e-56 | -8.615850e-47 |
| Msa1003440 | Msa1173900 | 0.802941 | 4.417516e-49 | -8.615850e-47 |
| Msa1009750 | Msa1173900 | 0.800528 | 1.381698e-48 | -8.615850e-47 |
| Msa1010460 | Msa1173900 | 0.801068 | 1.071932e-48 | -8.615850e-47 |
| Msa1023170 | Msa1173900 | -0.833298 | 5.780298e-56 | -8.615850e-47 |
| Msa1025940 | Msa1173900 | 0.800985 | 1.114488e-48 | -8.615850e-47 |
| Msa1027250 | Msa1173900 | 0.830429 | 2.951842e-55 | -8.615850e-47 |
| Msa1027300 | Msa1173900 | 0.823241 | 1.539874e-53 | -8.615850e-47 |
| Msa1027360 | Msa1173900 | 0.827180 | 1.804205e-54 | -8.615850e-47 |
| Msa1030930 | Msa1173900 | 0.836632 | 8.349152e-57 | -8.615850e-47 |
| Msa1044430 | Msa1173900 | 0.800631 | 1.316392e-48 | -8.615850e-47 |
| Msa1070050 | Msa1173900 | 0.828315 | 9.624993e-55 | -8.615850e-47 |
| Msa1070390 | Msa1173900 | 0.828164 | 1.047001e-54 | -8.615850e-47 |
| Msa1071660 | Msa1173900 | 0.856235 | 3.688919e-62 | -8.615850e-47 |
| Msa1083880 | Msa1173900 | 0.819836 | 9.419299e-53 | -8.615850e-47 |
| Msa1084500 | Msa1173900 | -0.815500 | 8.954515e-52 | -8.615850e-47 |
| Msa1088290 | Msa1173900 | 0.807716 | 4.411306e-50 | -8.615850e-47 |
| Msa1089270 | Msa1173900 | 0.805258 | 1.455707e-49 | -8.615850e-47 |
| Msa1093330 | Msa1173900 | 0.816409 | 5.613374e-52 | -8.615850e-47 |
| Msa1097230 | Msa1173900 | 0.802475 | 5.511751e-49 | -8.615850e-47 |
| Msa1097820 | Msa1173900 | 0.805902 | 1.066855e-49 | -8.615850e-47 |
| Msa0239840 | Msa1173900 | 0.801879 | 7.309152e-49 | -8.615850e-47 |
| Msa0241830 | Msa1173900 | 0.825810 | 3.826005e-54 | -8.615850e-47 |
| Msa0244980 | Msa1173900 | 0.817677 | 2.912423e-52 | -8.615850e-47 |
| Msa0245580 | Msa1173900 | 0.802383 | 5.757580e-49 | -8.615850e-47 |
| Msa0249580 | Msa1173900 | 0.801057 | 1.077222e-48 | -8.615850e-47 |
| Msa0258880 | Msa1173900 | -0.803597 | 3.231797e-49 | -8.615850e-47 |
| Msa0262480 | Msa1173900 | 0.833199 | 6.115481e-56 | -8.615850e-47 |
| Msa0267870 | Msa1173900 | 0.804039 | 2.615748e-49 | -8.615850e-47 |
| Msa0278790 | Msa1173900 | 0.802186 | 6.322814e-49 | -8.615850e-47 |
| Msa0283420 | Msa1173900 | 0.815669 | 8.211968e-52 | -8.615850e-47 |
| Msa0295000 | Msa1173900 | -0.825321 | 4.995546e-54 | -8.615850e-47 |
| Msa0296250 | Msa1173900 | 0.822575 | 2.201812e-53 | -8.615850e-47 |
| Msa0296790 | Msa1173900 | 0.814659 | 1.376833e-51 | -8.615850e-47 |
| Msa0296920 | Msa1173900 | 0.808742 | 2.666973e-50 | -8.615850e-47 |
| Msa0296980 | Msa1173900 | -0.807984 | 3.870568e-50 | -8.615850e-47 |
| Msa0300350 | Msa1173900 | 0.815877 | 7.380776e-52 | -8.615850e-47 |
| Msa0304660 | Msa1173900 | 0.820755 | 5.799553e-53 | -8.615850e-47 |
| Msa0322590 | Msa1173900 | 0.822255 | 2.612849e-53 | -8.615850e-47 |
| Msa0322900 | Msa1173900 | 0.821366 | 4.194259e-53 | -8.615850e-47 |
| Msa0331700 | Msa1173900 | 0.819024 | 1.442830e-52 | -8.615850e-47 |
| Msa0337510 | Msa1173900 | 0.804601 | 1.997729e-49 | -8.615850e-47 |
| Msa0343190 | Msa1173900 | 0.812396 | 4.330481e-51 | -8.615850e-47 |
| Msa0358120 | Msa1173900 | 0.800215 | 1.600306e-48 | -8.615850e-47 |
| Msa0363060 | Msa1173900 | 0.810574 | 1.077287e-50 | -8.615850e-47 |
| Msa1108800 | Msa1173900 | 0.800528 | 1.381642e-48 | -8.615850e-47 |
| Msa1113590 | Msa1173900 | 0.806536 | 7.842658e-50 | -8.615850e-47 |
| Msa1113880 | Msa1173900 | 0.805490 | 1.301637e-49 | -8.615850e-47 |
| Msa1114040 | Msa1173900 | 0.829002 | 6.568203e-55 | -8.615850e-47 |
| Msa1118710 | Msa1173900 | 0.829215 | 5.830080e-55 | -8.615850e-47 |
| Msa1123350 | Msa1173900 | 0.820347 | 7.196410e-53 | -8.615850e-47 |
| Msa1125790 | Msa1173900 | -0.833938 | 4.000573e-56 | -8.615850e-47 |
| Msa1126850 | Msa1173900 | 0.814754 | 1.311322e-51 | -8.615850e-47 |
| Msa1127540 | Msa1173900 | 0.821452 | 4.007115e-53 | -8.615850e-47 |
| Msa1127590 | Msa1173900 | 0.803983 | 2.686102e-49 | -8.615850e-47 |
| Msa1131490 | Msa1173900 | 0.810319 | 1.222591e-50 | -8.615850e-47 |
| Msa1131560 | Msa1173900 | 0.831715 | 1.426324e-55 | -8.615850e-47 |
| Msa1135800 | Msa1173900 | -0.826953 | 2.044296e-54 | -8.615850e-47 |
| Msa1135810 | Msa1173900 | -0.836526 | 8.889411e-57 | -8.615850e-47 |
| Msa1145240 | Msa1173900 | 0.802329 | 5.907420e-49 | -8.615850e-47 |
| Msa1150500 | Msa1173900 | 0.801735 | 7.825552e-49 | -8.615850e-47 |
| Msa1158230 | Msa1173900 | 0.810275 | 1.249665e-50 | -8.615850e-47 |
| Msa1158770 | Msa1173900 | 0.852092 | 5.790647e-61 | -8.615850e-47 |
| Msa1165780 | Msa1173900 | 0.821679 | 3.552072e-53 | -8.615850e-47 |
| Msa1166870 | Msa1173900 | 0.831319 | 1.785251e-55 | -8.615850e-47 |
| Msa1169720 | Msa1173900 | 0.800126 | 1.668483e-48 | -8.615850e-47 |
| Msa1173900 | Msa1175300 | 0.803444 | 3.475782e-49 | -8.615850e-47 |
| Msa1173900 | Msa1178370 | 0.873369 | 1.550955e-67 | -8.615850e-47 |
| Msa1173900 | Msa1179980 | 0.814696 | 1.350808e-51 | -8.615850e-47 |
| Msa1173900 | Msa1185440 | 0.803331 | 3.668051e-49 | -8.615850e-47 |
| Msa1173900 | Msa1188560 | 0.800221 | 1.595310e-48 | -8.615850e-47 |
| Msa1173900 | Msa1198880 | 0.801497 | 8.758526e-49 | -8.615850e-47 |
| Msa1173900 | Msa1199290 | 0.814259 | 1.687477e-51 | -8.615850e-47 |
| Msa1173900 | Msa1199710 | 0.809831 | 1.558101e-50 | -8.615850e-47 |
| Msa1173900 | Msa1200320 | 0.803333 | 3.664571e-49 | -8.615850e-47 |
| Msa1173900 | Msa1201810 | 0.800338 | 1.510068e-48 | -8.615850e-47 |
| Msa1173900 | Msa1201830 | 0.818785 | 1.634950e-52 | -8.615850e-47 |
| Msa1173900 | Msa1202580 | 0.827180 | 1.803441e-54 | -8.615850e-47 |
| Msa1173900 | Msa1204100 | -0.818130 | 2.301949e-52 | -8.615850e-47 |
| Msa1173900 | Msa1204830 | 0.803970 | 2.703981e-49 | -8.615850e-47 |
| Msa1173900 | Msa1205850 | 0.818646 | 1.758231e-52 | -8.615850e-47 |
| Msa1173900 | Msa1206650 | 0.834211 | 3.416972e-56 | -8.615850e-47 |
| Msa1173900 | Msa1207730 | 0.800085 | 1.700076e-48 | -8.615850e-47 |
| Msa1173900 | Msa1210660 | -0.802934 | 4.432492e-49 | -8.615850e-47 |
| Msa1173900 | Msa1211830 | 0.863819 | 1.895945e-64 | -8.615850e-47 |
| Msa1173900 | Msa1213770 | 0.820539 | 6.503460e-53 | -8.615850e-47 |
| Msa1173900 | Msa1214320 | 0.821152 | 4.699457e-53 | -8.615850e-47 |
| Msa1173900 | Msa1223330 | 0.849684 | 2.760832e-60 | -8.615850e-47 |
| Msa1173900 | Msa1226610 | 0.850135 | 2.064890e-60 | -8.615850e-47 |
| Msa1173900 | Msa1226720 | 0.820693 | 5.994022e-53 | -8.615850e-47 |
| Msa1173900 | Msa1227690 | 0.818933 | 1.513004e-52 | -8.615850e-47 |
| Msa1173900 | Msa1242640 | 0.820890 | 5.399594e-53 | -8.615850e-47 |
| Msa1173900 | Msa1253810 | 0.847157 | 1.381289e-59 | -8.615850e-47 |
| Msa1173900 | Msa1256270 | -0.824679 | 7.084282e-54 | -8.615850e-47 |
| Msa1173900 | Msa1256770 | 0.807268 | 5.492440e-50 | -8.615850e-47 |
| Msa1173900 | Msa1262960 | 0.804548 | 2.049192e-49 | -8.615850e-47 |
| Msa1173900 | Msa1266020 | 0.800290 | 1.544724e-48 | -8.615850e-47 |
| Msa1173900 | Msa1270620 | 0.818980 | 1.476531e-52 | -8.615850e-47 |
| Msa1173900 | Msa1270690 | 0.816082 | 6.641419e-52 | -8.615850e-47 |
| Msa1173900 | Msa1271580 | 0.805686 | 1.184438e-49 | -8.615850e-47 |
| Msa1173900 | Msa1276970 | 0.823462 | 1.367628e-53 | -8.615850e-47 |
| Msa1173900 | Msa1294840 | 0.819632 | 1.049100e-52 | -8.615850e-47 |
| Msa1173900 | Msa1294960 | 0.812239 | 4.685197e-51 | -8.615850e-47 |
| Msa1173900 | Msa1296460 | -0.810249 | 1.266193e-50 | -8.615850e-47 |
| Msa1173900 | Msa1296830 | 0.803127 | 4.043829e-49 | -8.615850e-47 |
| Msa1173900 | Msa1297800 | 0.809187 | 2.142059e-50 | -8.615850e-47 |
| Msa1173900 | Msa1299350 | 0.803511 | 3.365817e-49 | -8.615850e-47 |
| Msa1173900 | Msa1299700 | 0.813901 | 2.023806e-51 | -8.615850e-47 |
| Msa1173900 | Msa1303580 | 0.838039 | 3.644165e-57 | -8.615850e-47 |
| Msa1173900 | Msa1304860 | 0.815699 | 8.085554e-52 | -8.615850e-47 |
| Msa1173900 | Msa1306990 | 0.814641 | 1.389271e-51 | -8.615850e-47 |
| Msa1173900 | Msa1310690 | 0.832961 | 7.009425e-56 | -8.615850e-47 |
| Msa1173900 | Msa1318620 | 0.880396 | 5.684038e-70 | -8.615850e-47 |
| Msa1173900 | Msa1323990 | 0.824397 | 8.252664e-54 | -8.615850e-47 |
| Msa1173900 | Msa1329050 | -0.820167 | 7.914162e-53 | -8.615850e-47 |
| Msa1173900 | Msa1329450 | 0.846516 | 2.067619e-59 | -8.615850e-47 |
| Msa1173900 | Msa1331250 | 0.807924 | 3.985917e-50 | -8.615850e-47 |
| Msa1173900 | Msa1333970 | 0.864989 | 8.170445e-65 | -8.615850e-47 |
| Msa1173900 | Msa1348650 | -0.801362 | 9.334708e-49 | -8.615850e-47 |
| Msa1173900 | Msa1351540 | 0.823194 | 1.579264e-53 | -8.615850e-47 |
| Msa1173900 | Msa1355700 | 0.811486 | 6.834119e-51 | -8.615850e-47 |
| Msa1173900 | Msa1359270 | 0.812985 | 3.217913e-51 | -8.615850e-47 |
| Msa1173900 | Msa1369490 | 0.801315 | 9.542143e-49 | -8.615850e-47 |
| Msa1173900 | Msa1373820 | 0.802419 | 5.662035e-49 | -8.615850e-47 |
| Msa1173900 | Msa1380970 | 0.804511 | 2.085463e-49 | -8.615850e-47 |
| Msa1173900 | Msa1381480 | 0.814865 | 1.239079e-51 | -8.615850e-47 |
| Msa1173900 | Msa1381650 | 0.822655 | 2.108758e-53 | -8.615850e-47 |
| Msa1173900 | Msa1391480 | 0.803578 | 3.261099e-49 | -8.615850e-47 |
| Msa1173900 | Msa1395730 | 0.807076 | 6.029667e-50 | -8.615850e-47 |
| Msa1173900 | Msa1397940 | 0.800606 | 1.331862e-48 | -8.615850e-47 |
| Msa1173900 | Msa1401420 | 0.804070 | 2.576559e-49 | -8.615850e-47 |
| Msa1173900 | Msa1410420 | 0.813405 | 2.602063e-51 | -8.615850e-47 |
| Msa1173900 | Msa1411950 | 0.817049 | 4.034426e-52 | -8.615850e-47 |
| Msa1173900 | Msa1412660 | 0.813837 | 2.090615e-51 | -8.615850e-47 |
| Msa1173900 | Msa1416370 | 0.818542 | 1.856430e-52 | -8.615850e-47 |
| Msa1173900 | Msa1421900 | 0.803994 | 2.672104e-49 | -8.615850e-47 |
| Msa1173900 | Msa1422810 | 0.810644 | 1.040191e-50 | -8.615850e-47 |
| Msa1173900 | Msa1432480 | 0.835230 | 1.893357e-56 | -8.615850e-47 |
| Msa1173900 | Msa1433600 | 0.806002 | 1.016380e-49 | -8.615850e-47 |
| Msa1173900 | Msa1438640 | 0.810073 | 1.381540e-50 | -8.615850e-47 |
| Msa1173900 | Msa1445940 | 0.818728 | 1.684346e-52 | -8.615850e-47 |
| Msa1173900 | Msa1449910 | 0.805222 | 1.481516e-49 | -8.615850e-47 |
| Msa1173900 | Msa1454450 | 0.822488 | 2.306590e-53 | -8.615850e-47 |
| Msa1173900 | Msa1454530 | 0.808629 | 2.819435e-50 | -8.615850e-47 |
| Msa1173900 | Msa1454950 | 0.818315 | 2.089941e-52 | -8.615850e-47 |
| Msa1173900 | Msa1459960 | 0.832467 | 9.297246e-56 | -8.615850e-47 |
| Msa1173900 | Msa1465570 | 0.800422 | 1.452065e-48 | -8.615850e-47 |
| Msa0498560 | Msa1173900 | 0.813963 | 1.961965e-51 | -8.615850e-47 |
| Msa0509120 | Msa1173900 | 0.800239 | 1.582181e-48 | -8.615850e-47 |
| Msa0509950 | Msa1173900 | -0.821890 | 3.173291e-53 | -8.615850e-47 |
| Msa0511770 | Msa1173900 | 0.851701 | 7.476679e-61 | -8.615850e-47 |
| Msa0513260 | Msa1173900 | 0.832399 | 9.664330e-56 | -8.615850e-47 |
| Msa0518030 | Msa1173900 | 0.824432 | 8.099096e-54 | -8.615850e-47 |
| Msa0518960 | Msa1173900 | 0.800815 | 1.207109e-48 | -8.615850e-47 |
| Msa0524590 | Msa1173900 | 0.837677 | 4.513423e-57 | -8.615850e-47 |
| Msa0527910 | Msa1173900 | 0.815660 | 8.249205e-52 | -8.615850e-47 |
| Msa0534080 | Msa1173900 | 0.804500 | 2.097056e-49 | -8.615850e-47 |
| Msa0546570 | Msa1173900 | 0.808937 | 2.422442e-50 | -8.615850e-47 |
| Msa0547990 | Msa1173900 | 0.855315 | 6.852931e-62 | -8.615850e-47 |
| Msa0550540 | Msa1173900 | 0.818949 | 1.501079e-52 | -8.615850e-47 |
| Msa0550570 | Msa1173900 | 0.838193 | 3.326341e-57 | -8.615850e-47 |
| Msa0554180 | Msa1173900 | -0.808394 | 3.164236e-50 | -8.615850e-47 |
| Msa0554380 | Msa1173900 | -0.818990 | 1.468760e-52 | -8.615850e-47 |
| Msa0556010 | Msa1173900 | 0.806492 | 8.013463e-50 | -8.615850e-47 |
| Msa0561430 | Msa1173900 | 0.820550 | 6.466267e-53 | -8.615850e-47 |
| Msa0576730 | Msa1173900 | 0.832541 | 8.913746e-56 | -8.615850e-47 |
| Msa0578090 | Msa1173900 | 0.826812 | 2.208820e-54 | -8.615850e-47 |
| Msa0583500 | Msa1173900 | 0.803801 | 2.931445e-49 | -8.615850e-47 |
| Msa0584550 | Msa1173900 | 0.808119 | 3.622483e-50 | -8.615850e-47 |
| Msa0586850 | Msa1173900 | 0.827969 | 1.166401e-54 | -8.615850e-47 |
| Msa0593700 | Msa1173900 | 0.820702 | 5.964267e-53 | -8.615850e-47 |
| Msa0594710 | Msa1173900 | 0.808962 | 2.393351e-50 | -8.615850e-47 |
| Msa0594800 | Msa1173900 | 0.808803 | 2.587547e-50 | -8.615850e-47 |
| Msa0599900 | Msa1173900 | 0.817154 | 3.819405e-52 | -8.615850e-47 |
| Msa0602370 | Msa1173900 | 0.811154 | 8.070260e-51 | -8.615850e-47 |
| Msa0851470 | Msa1173900 | 0.819797 | 9.619398e-53 | -8.615850e-47 |
| Msa0853950 | Msa1173900 | 0.806819 | 6.833679e-50 | -8.615850e-47 |
| Msa0864420 | Msa1173900 | 0.809931 | 1.482198e-50 | -8.615850e-47 |
| Msa0869010 | Msa1173900 | 0.828092 | 1.089324e-54 | -8.615850e-47 |
| Msa0870650 | Msa1173900 | 0.803648 | 3.152644e-49 | -8.615850e-47 |
| Msa0871780 | Msa1173900 | 0.813086 | 3.057792e-51 | -8.615850e-47 |
| Msa0879850 | Msa1173900 | 0.841966 | 3.448198e-58 | -8.615850e-47 |
| Msa0888940 | Msa1173900 | 0.814887 | 1.225603e-51 | -8.615850e-47 |
| Msa0895310 | Msa1173900 | 0.803865 | 2.842727e-49 | -8.615850e-47 |
| Msa0901110 | Msa1173900 | 0.833669 | 4.669521e-56 | -8.615850e-47 |
| Msa0903780 | Msa1173900 | 0.817017 | 4.101490e-52 | -8.615850e-47 |
| Msa0905750 | Msa1173900 | 0.817743 | 2.814146e-52 | -8.615850e-47 |
| Msa0905990 | Msa1173900 | 0.860323 | 2.238100e-63 | -8.615850e-47 |
| Msa0913240 | Msa1173900 | 0.808661 | 2.774915e-50 | -8.615850e-47 |
| Msa0938010 | Msa1173900 | 0.817194 | 3.742859e-52 | -8.615850e-47 |
| Msa0940830 | Msa1173900 | 0.810035 | 1.408306e-50 | -8.615850e-47 |
| Msa0942710 | Msa1173900 | 0.826293 | 2.937106e-54 | -8.615850e-47 |
| Msa0943170 | Msa1173900 | 0.833095 | 6.493260e-56 | -8.615850e-47 |
| Msa0943270 | Msa1173900 | 0.832298 | 1.023887e-55 | -8.615850e-47 |
| Msa0944200 | Msa1173900 | 0.832612 | 8.557632e-56 | -8.615850e-47 |
| Msa0944610 | Msa1173900 | 0.822779 | 1.973560e-53 | -8.615850e-47 |
| Msa0947530 | Msa1173900 | -0.819345 | 1.219202e-52 | -8.615850e-47 |
| Msa0963020 | Msa1173900 | 0.811164 | 8.028727e-51 | -8.615850e-47 |
| Msa0973320 | Msa1173900 | 0.819509 | 1.118750e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173900 | MtrunA17_Chr8g0349271 | 96.040 | 202 | 6 | 1 | 1 | 202 | 1 | 200 | 4.61e-131 | 366 |
| Msa1173900 | MtrunA17_Chr1g0203401 | 57.812 | 192 | 68 | 3 | 24 | 202 | 18 | 209 | 8.82e-60 | 186 |
| Msa1173900 | MtrunA17_Chr5g0397781 | 59.836 | 122 | 49 | 0 | 81 | 202 | 86 | 207 | 3.60e-44 | 146 |
| Msa1173900 | MtrunA17_Chr8g0386521 | 41.848 | 184 | 106 | 1 | 19 | 202 | 16 | 198 | 2.19e-41 | 139 |
| Msa1173900 | MtrunA17_Chr7g0247121 | 64.615 | 65 | 23 | 0 | 138 | 202 | 34 | 98 | 1.77e-26 | 97.4 |
| Msa1173900 | MtrunA17_Chr1g0173571 | 31.148 | 122 | 84 | 0 | 76 | 197 | 148 | 269 | 2.78e-12 | 63.9 |
| Msa1173900 | MtrunA17_Chr1g0153281 | 32.743 | 113 | 75 | 1 | 90 | 202 | 504 | 615 | 3.76e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173900 | AT3G61260.1 | 62.424 | 165 | 58 | 3 | 42 | 202 | 48 | 212 | 5.05e-62 | 192 |
| Msa1173900 | AT5G23750.2 | 51.942 | 206 | 90 | 4 | 1 | 202 | 1 | 201 | 2.05e-56 | 177 |
| Msa1173900 | AT3G48940.1 | 58.784 | 148 | 61 | 0 | 55 | 202 | 28 | 175 | 2.80e-56 | 176 |
| Msa1173900 | AT5G23750.1 | 52.577 | 194 | 90 | 2 | 9 | 202 | 11 | 202 | 3.20e-54 | 172 |
| Msa1173900 | AT5G23750.3 | 52.577 | 194 | 90 | 2 | 9 | 202 | 38 | 229 | 8.87e-54 | 172 |
| Msa1173900 | AT2G45820.1 | 55.340 | 206 | 72 | 6 | 1 | 202 | 1 | 190 | 8.12e-53 | 168 |
| Msa1173900 | AT1G63295.1 | 43.802 | 121 | 65 | 2 | 85 | 202 | 31 | 151 | 9.23e-23 | 90.1 |
| Msa1173900 | AT1G63295.2 | 43.802 | 121 | 65 | 2 | 85 | 202 | 71 | 191 | 1.94e-22 | 90.1 |
| Msa1173900 | AT4G00670.1 | 42.991 | 107 | 60 | 1 | 97 | 202 | 17 | 123 | 3.60e-22 | 87.4 |
| Msa1173900 | AT1G30320.1 | 37.037 | 108 | 64 | 1 | 99 | 202 | 401 | 508 | 1.62e-11 | 62.8 |
Find 67 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTGTGAGTGTAAAATTTA+TGG | 0.135936 | 8_1:+4618305 | Msa1173900:three_prime_UTR |
| AGAGAGAGAGAAGAAGTTTA+AGG | 0.181430 | 8_1:-4614117 | None:intergenic |
| GATATCGCTCTTGCAGAAAT+AGG | 0.196780 | 8_1:+4616816 | Msa1173900:intron |
| TATAGACAAAATTTCATAAT+TGG | 0.216142 | 8_1:-4618245 | None:intergenic |
| AAGCATCCAAGGAGTTTCTT+TGG | 0.246919 | 8_1:-4618206 | None:intergenic |
| TTCTTACTTATTCTCTGCTT+TGG | 0.294744 | 8_1:-4616889 | None:intergenic |
| TGGACAGCACAAAGGATCTT+TGG | 0.335191 | 8_1:+4618356 | Msa1173900:three_prime_UTR |
| GAACTGCTTCTTGCTTGGTT+TGG | 0.343276 | 8_1:-4614215 | None:intergenic |
| AACACTTTGGCAGGAGCAAT+TGG | 0.362647 | 8_1:+4618025 | Msa1173900:intron |
| GCCGGTGCCGGTGCCGGAGC+AGG | 0.362701 | 8_1:-4614243 | None:intergenic |
| TCAGCCATAGGTTCTGAGTT+TGG | 0.377593 | 8_1:-4614189 | None:intergenic |
| GCTCTCTACTGTTGCTGCTT+GGG | 0.383440 | 8_1:+4617220 | Msa1173900:CDS |
| AGCAGGAACTGCTTCTTGCT+TGG | 0.401159 | 8_1:-4614220 | None:intergenic |
| GGTTCAACGGCAGCAGGAGC+TGG | 0.411760 | 8_1:-4614279 | None:intergenic |
| ATGAAAGGAAATTTAGAAGT+AGG | 0.417031 | 8_1:-4618534 | None:intergenic |
| ATATCGCTCTTGCAGAAATA+GGG | 0.417625 | 8_1:+4616817 | Msa1173900:CDS |
| ACAATGTATAGTTGGTAGAT+TGG | 0.429592 | 8_1:-4618585 | None:intergenic |
| ACTGGTGCCGGTGCCGGTGC+CGG | 0.449249 | 8_1:-4614249 | None:intergenic |
| TCCTGCTCCTGCTCCGGCAC+CGG | 0.451400 | 8_1:+4614236 | Msa1173900:CDS |
| GCAGGAGCTGGAGTTGGAAC+TGG | 0.452399 | 8_1:-4614267 | None:intergenic |
| GCCGGTGCCGGAGCAGGAGC+AGG | 0.453467 | 8_1:-4614237 | None:intergenic |
| AGCTCTCTACTGTTGCTGCT+TGG | 0.453757 | 8_1:+4617219 | Msa1173900:CDS |
| TCCTGCTCCGGCACCGGCAC+CGG | 0.454103 | 8_1:+4614242 | Msa1173900:CDS |
| ACCTCTAGCTGAGGCACCTC+CGG | 0.458768 | 8_1:+4614302 | Msa1173900:CDS |
| GCTGCAAAACATAATGCAAC+AGG | 0.462965 | 8_1:+4618176 | Msa1173900:CDS |
| GTTGGAACTGGTGCCGGTGC+CGG | 0.472287 | 8_1:-4614255 | None:intergenic |
| CAGAAATAGGGAAAGAGAAA+AGG | 0.476722 | 8_1:+4616829 | Msa1173900:CDS |
| GTGTCATCTGCCGCAGGTGG+CGG | 0.477296 | 8_1:-4614354 | None:intergenic |
| AGAGGTGGTTCAACGGCAGC+AGG | 0.490625 | 8_1:-4614285 | None:intergenic |
| TATGGAAAGGGAAAATACAT+TGG | 0.495218 | 8_1:+4618323 | Msa1173900:three_prime_UTR |
| ACTGTTCCAAAGAAACTCCT+TGG | 0.505361 | 8_1:+4618200 | Msa1173900:CDS |
| AGCAGTTCCTGCTCCTGCTC+CGG | 0.505398 | 8_1:+4614230 | Msa1173900:CDS |
| AACAAGACTAACCTCTATCA+AGG | 0.505662 | 8_1:-4616276 | None:intergenic |
| AAGAATGCATCCCTTGATAG+AGG | 0.508900 | 8_1:+4616265 | Msa1173900:CDS |
| AGCAGCGGCACCGCCACCTG+CGG | 0.508970 | 8_1:+4614344 | Msa1173900:CDS |
| GGTTATCTAATGTGAAGGCA+TGG | 0.509564 | 8_1:+4616850 | Msa1173900:CDS |
| TTGGTTTGGAGTTCAGCCAT+AGG | 0.510361 | 8_1:-4614201 | None:intergenic |
| TGAACCAAACTCAGAACCTA+TGG | 0.524051 | 8_1:+4614185 | Msa1173900:exon |
| GCTGGAGTTGGAACTGGTGC+CGG | 0.528799 | 8_1:-4614261 | None:intergenic |
| ACGGCAGCAGGAGCTGGAGT+TGG | 0.534821 | 8_1:-4614273 | None:intergenic |
| AATCAAGAACAAGGTGGCAA+TGG | 0.536099 | 8_1:+4618076 | Msa1173900:CDS |
| CATCATATCAAAAGCATCCA+AGG | 0.539784 | 8_1:-4618217 | None:intergenic |
| GAGTGTAAAATTTATGGAAA+GGG | 0.545883 | 8_1:+4618311 | Msa1173900:three_prime_UTR |
| GCCTTTGTGTCATCTGCCGC+AGG | 0.563039 | 8_1:-4614360 | None:intergenic |
| CACAAAGGCACTTGTTGTTG+TGG | 0.563137 | 8_1:+4614374 | Msa1173900:CDS |
| GTTATCTAATGTGAAGGCAT+GGG | 0.574842 | 8_1:+4616851 | Msa1173900:CDS |
| GGAAAGGGAAAATACATTGG+AGG | 0.579726 | 8_1:+4618326 | Msa1173900:three_prime_UTR |
| GAAAAGGTTATCTAATGTGA+AGG | 0.581637 | 8_1:+4616845 | Msa1173900:CDS |
| CTCAGCTAGAGGTGGTTCAA+CGG | 0.595513 | 8_1:-4614292 | None:intergenic |
| ACCGGAGGTGCCTCAGCTAG+AGG | 0.598498 | 8_1:-4614303 | None:intergenic |
| TGAAGCAATTCTCAAGGCAG+AGG | 0.599324 | 8_1:+4618148 | Msa1173900:CDS |
| TAGTGGAAAGAATCAATGAA+AGG | 0.599628 | 8_1:-4618549 | None:intergenic |
| AATACATTGGAGGAACATGT+TGG | 0.602186 | 8_1:+4618336 | Msa1173900:three_prime_UTR |
| ACGTGCTGAAGCAATTCTCA+AGG | 0.603219 | 8_1:+4618142 | Msa1173900:CDS |
| TGAGTGTAAAATTTATGGAA+AGG | 0.610551 | 8_1:+4618310 | Msa1173900:three_prime_UTR |
| TTGGTTGTGTAATAATGTAG+TGG | 0.621475 | 8_1:-4618566 | None:intergenic |
| ACAAGACTAACCTCTATCAA+GGG | 0.621639 | 8_1:-4616275 | None:intergenic |
| AGATCAACAAAGAACTTGTG+TGG | 0.634370 | 8_1:-4614039 | None:intergenic |
| TTTGTGTCATCTGCCGCAGG+TGG | 0.638483 | 8_1:-4614357 | None:intergenic |
| TGGTGAGAAAATCAAGAACA+AGG | 0.641835 | 8_1:+4618067 | Msa1173900:CDS |
| AATGGTTCACAAACAAGCAG+AGG | 0.652178 | 8_1:+4618094 | Msa1173900:CDS |
| TGCTGTTGAAAAGAAAGCAG+CGG | 0.654918 | 8_1:+4614329 | Msa1173900:CDS |
| CGTTGAACCACCTCTAGCTG+AGG | 0.656582 | 8_1:+4614293 | Msa1173900:CDS |
| ACCTGCGGCAGATGACACAA+AGG | 0.679211 | 8_1:+4614359 | Msa1173900:CDS |
| GGAGGTGCCTCAGCTAGAGG+TGG | 0.679539 | 8_1:-4614300 | None:intergenic |
| GAACATGTTGGACAGCACAA+AGG | 0.681756 | 8_1:+4618348 | Msa1173900:three_prime_UTR |
| TGAGAAAATCAAGAACAAGG+TGG | 0.758003 | 8_1:+4618070 | Msa1173900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTTTGATAAGATT+CGG | - | chr8_1:4615639-4615658 | None:intergenic | 10.0% |
| !!! | ATACATTTTTTTTTTTTTGA+GGG | - | chr8_1:4616157-4616176 | None:intergenic | 10.0% |
| !!! | AATACATTTTTTTTTTTTTG+AGG | - | chr8_1:4616158-4616177 | None:intergenic | 10.0% |
| !!! | TAATTGCATAAAAATATTTT+AGG | + | chr8_1:4616964-4616983 | Msa1173900:intron | 10.0% |
| !!! | AATTGCATAAAAATATTTTA+GGG | + | chr8_1:4616965-4616984 | Msa1173900:intron | 10.0% |
| !!! | TATTATTATTGATTAAAAGA+TGG | + | chr8_1:4617333-4617352 | Msa1173900:intron | 10.0% |
| !! | AATTACTATATAAAAACTAT+TGG | + | chr8_1:4618419-4618438 | Msa1173900:three_prime_UTR | 10.0% |
| !! | ATTACTATATAAAAACTATT+GGG | + | chr8_1:4618420-4618439 | Msa1173900:three_prime_UTR | 10.0% |
| !!! | AAAATCCATAATTATTTTTC+AGG | - | chr8_1:4614738-4614757 | None:intergenic | 15.0% |
| !!! | ATAATTCTGATATATGTTTT+TGG | + | chr8_1:4614842-4614861 | Msa1173900:intron | 15.0% |
| !!! | TAATTCTGATATATGTTTTT+GGG | + | chr8_1:4614843-4614862 | Msa1173900:intron | 15.0% |
| !! | AACCTAACTAAATATATAAA+AGG | + | chr8_1:4615196-4615215 | Msa1173900:intron | 15.0% |
| !!! | TCCATAATAATTATTCTTTT+AGG | + | chr8_1:4615402-4615421 | Msa1173900:intron | 15.0% |
| !! | TCCTAAAAGAATAATTATTA+TGG | - | chr8_1:4615406-4615425 | None:intergenic | 15.0% |
| !! | TAATGAAAATCACTTTAATT+TGG | - | chr8_1:4615928-4615947 | None:intergenic | 15.0% |
| !!! | AATATTTTGAAATCAGTTTA+AGG | - | chr8_1:4615954-4615973 | None:intergenic | 15.0% |
| !! | GTTAATATCAAATATCAATA+AGG | - | chr8_1:4616335-4616354 | None:intergenic | 15.0% |
| !!! | TTTTGAGTAAATATCTAAAA+TGG | - | chr8_1:4617052-4617071 | None:intergenic | 15.0% |
| !! | TGTTTAATATCCTAAAATTT+AGG | + | chr8_1:4617163-4617182 | Msa1173900:intron | 15.0% |
| !! | GTTTAATATCCTAAAATTTA+GGG | + | chr8_1:4617164-4617183 | Msa1173900:intron | 15.0% |
| !!! | AAGATAAAGATAAGATTTTA+TGG | + | chr8_1:4617436-4617455 | Msa1173900:intron | 15.0% |
| !!! | AATTAAATTTTTGAACACTT+TGG | + | chr8_1:4618012-4618031 | Msa1173900:intron | 15.0% |
| !! | TATAGACAAAATTTCATAAT+TGG | - | chr8_1:4618248-4618267 | None:intergenic | 15.0% |
| !!! | TATTTTCTCTAAAGTATTTA+AGG | - | chr8_1:4618475-4618494 | None:intergenic | 15.0% |
| !!! | GAATTCCTTCTTTAATTTTT+TGG | + | chr8_1:4614416-4614435 | Msa1173900:intron | 20.0% |
| !! | AAAAGCCAAAAAATTAAAGA+AGG | - | chr8_1:4614424-4614443 | None:intergenic | 20.0% |
| !!! | CAAAATTCAGTTTTTACAAT+TGG | + | chr8_1:4614463-4614482 | Msa1173900:intron | 20.0% |
| !! | AGTGAAAATTAATGAAAGTA+TGG | + | chr8_1:4614532-4614551 | Msa1173900:intron | 20.0% |
| !!! | TTTGAGTTAATTTGAATTGT+TGG | + | chr8_1:4614637-4614656 | Msa1173900:intron | 20.0% |
| !!! | TTGAATATACTATTGATTCA+TGG | + | chr8_1:4614660-4614679 | Msa1173900:intron | 20.0% |
| !!! | GTTTTCCTGAAAAATAATTA+TGG | + | chr8_1:4614730-4614749 | Msa1173900:intron | 20.0% |
| !!! | AGAATCATTTTTGTATGAAT+TGG | + | chr8_1:4614899-4614918 | Msa1173900:intron | 20.0% |
| !!! | GAATCATTTTTGTATGAATT+GGG | + | chr8_1:4614900-4614919 | Msa1173900:intron | 20.0% |
| !! | ACCATAACTAATAATTGAAA+AGG | - | chr8_1:4615031-4615050 | None:intergenic | 20.0% |
| !!! | TTATATATTTAGTTAGGTTG+AGG | - | chr8_1:4615195-4615214 | None:intergenic | 20.0% |
| !!! | GACCTTTTATATATTTAGTT+AGG | - | chr8_1:4615201-4615220 | None:intergenic | 20.0% |
| !!! | AAGACAATGTATAATTTTCT+AGG | - | chr8_1:4615701-4615720 | None:intergenic | 20.0% |
| !! | AATATATCTCTCATATCATT+AGG | + | chr8_1:4615775-4615794 | Msa1173900:intron | 20.0% |
| !! | ATAGAACAAGAAATGATTTA+AGG | - | chr8_1:4615879-4615898 | None:intergenic | 20.0% |
| !!! | TAAATGATTCTTTGATTTGT+AGG | + | chr8_1:4616010-4616029 | Msa1173900:intron | 20.0% |
| !! | TTCTTTATTGGATTCTAATT+AGG | - | chr8_1:4616109-4616128 | None:intergenic | 20.0% |
| !! | AATTAGAATCCAATAAAGAA+AGG | + | chr8_1:4616109-4616128 | Msa1173900:intron | 20.0% |
| !!! | TTTTTTTTTTTTGAGGGAAA+AGG | - | chr8_1:4616151-4616170 | None:intergenic | 20.0% |
| !!! | TATCTTTACCATTTTTCTTT+TGG | + | chr8_1:4616215-4616234 | Msa1173900:intron | 20.0% |
| !!! | AAATATTTTAGGGATCATTT+TGG | + | chr8_1:4616975-4616994 | Msa1173900:intron | 20.0% |
| !!! | ATTTTTGTGTTATCTTTACA+GGG | + | chr8_1:4617187-4617206 | Msa1173900:intron | 20.0% |
| !!! | TAGTAAAAAATGTAGACTTT+TGG | + | chr8_1:4617475-4617494 | Msa1173900:intron | 20.0% |
| !! | ATAAAGAAGGATTCAATATA+TGG | - | chr8_1:4617634-4617653 | None:intergenic | 20.0% |
| !! | AGCATAATTCTTTATAAAGA+AGG | - | chr8_1:4617647-4617666 | None:intergenic | 20.0% |
| !! | ATTAGAAAAGAAACTCTAAA+TGG | + | chr8_1:4617675-4617694 | Msa1173900:intron | 20.0% |
| !! | AAACTGTTATAAGAGATTAA+TGG | - | chr8_1:4617975-4617994 | None:intergenic | 20.0% |
| !!! | TTTTTGGCTTTTAGAAATCA+TGG | + | chr8_1:4614432-4614451 | Msa1173900:intron | 25.0% |
| !!! | TTTTGGCTTTTAGAAATCAT+GGG | + | chr8_1:4614433-4614452 | Msa1173900:intron | 25.0% |
| ! | ATTGGATCAATATTGTTTCA+TGG | + | chr8_1:4614481-4614500 | Msa1173900:intron | 25.0% |
| !!! | GATAGTTTTGGAAGAAAAAA+TGG | + | chr8_1:4614505-4614524 | Msa1173900:intron | 25.0% |
| !! | GCCTTTTCAATTATTAGTTA+TGG | + | chr8_1:4615027-4615046 | Msa1173900:intron | 25.0% |
| ! | TCAATTATTAGTTATGGTCT+TGG | + | chr8_1:4615033-4615052 | Msa1173900:intron | 25.0% |
| ! | TATGATGTGACATGTTAATA+TGG | + | chr8_1:4615064-4615083 | Msa1173900:intron | 25.0% |
| ! | ATGATGTGACATGTTAATAT+GGG | + | chr8_1:4615065-4615084 | Msa1173900:intron | 25.0% |
| ! | ACTGAACAATTCATTCTTAA+TGG | - | chr8_1:4615259-4615278 | None:intergenic | 25.0% |
| ! | TAAGTACACTTAGATTTAGT+TGG | + | chr8_1:4615473-4615492 | Msa1173900:intron | 25.0% |
| ! | AAGTACACTTAGATTTAGTT+GGG | + | chr8_1:4615474-4615493 | Msa1173900:intron | 25.0% |
| ! | CTCAAATGAAAAATGAGTAT+CGG | + | chr8_1:4615497-4615516 | Msa1173900:intron | 25.0% |
| !!! | AATCACTTTAATTTGGACAA+AGG | - | chr8_1:4615921-4615940 | None:intergenic | 25.0% |
| ! | AAACATTTATCATATCTCAC+TGG | + | chr8_1:4616045-4616064 | Msa1173900:intron | 25.0% |
| ! | TACATGATTCCTTTCTTTAT+TGG | - | chr8_1:4616121-4616140 | None:intergenic | 25.0% |
| !! | GTCTAAGATAATTACATCAA+AGG | - | chr8_1:4616186-4616205 | None:intergenic | 25.0% |
| ! | TCTGTAAACCAAAAGAAAAA+TGG | - | chr8_1:4616226-4616245 | None:intergenic | 25.0% |
| !!! | ATTTTTCTTTTGGTTTACAG+AGG | + | chr8_1:4616225-4616244 | Msa1173900:intron | 25.0% |
| !! | ACTATTTTCATGTAAGCTAT+AGG | - | chr8_1:4616555-4616574 | None:intergenic | 25.0% |
| ! | AAAAAAACATATTTGAGGAG+AGG | - | chr8_1:4616785-4616804 | None:intergenic | 25.0% |
| ! | CCACAAAAAAAACATATTTG+AGG | - | chr8_1:4616790-4616809 | None:intergenic | 25.0% |
| !!! | CCTCAAATATGTTTTTTTTG+TGG | + | chr8_1:4616787-4616806 | Msa1173900:intron | 25.0% |
| !! | TTTGGAATATTGATAACATG+AGG | + | chr8_1:4616993-4617012 | Msa1173900:intron | 25.0% |
| !! | TTGGAATATTGATAACATGA+GGG | + | chr8_1:4616994-4617013 | Msa1173900:intron | 25.0% |
| !! | CACAAAAATCCCTAAATTTT+AGG | - | chr8_1:4617176-4617195 | None:intergenic | 25.0% |
| !! | GATTTTTGTGTTATCTTTAC+AGG | + | chr8_1:4617186-4617205 | Msa1173900:intron | 25.0% |
| ! | CTATAAATTGTGATGTATGT+TGG | + | chr8_1:4617361-4617380 | Msa1173900:intron | 25.0% |
| !! | GATAAAGCACATCTTTTTAA+AGG | + | chr8_1:4617395-4617414 | Msa1173900:intron | 25.0% |
| ! | TGAGTGTAAAATTTATGGAA+AGG | + | chr8_1:4618310-4618329 | Msa1173900:three_prime_UTR | 25.0% |
| ! | GAGTGTAAAATTTATGGAAA+GGG | + | chr8_1:4618311-4618330 | Msa1173900:three_prime_UTR | 25.0% |
| ! | ATGAAAGGAAATTTAGAAGT+AGG | - | chr8_1:4618537-4618556 | None:intergenic | 25.0% |
| ! | TTCTTTTCAACAGCATTAAC+CGG | - | chr8_1:4614324-4614343 | None:intergenic | 30.0% |
| ! | TTGTTTCATGGTGATAGTTT+TGG | + | chr8_1:4614493-4614512 | Msa1173900:intron | 30.0% |
| !!! | GTTTTGGAAGAAAAAATGGA+AGG | + | chr8_1:4614509-4614528 | Msa1173900:intron | 30.0% |
| TGATGTGACATGTTAATATG+GGG | + | chr8_1:4615066-4615085 | Msa1173900:intron | 30.0% | |
| AAAGGTCTAACCATGAAATT+TGG | + | chr8_1:4615214-4615233 | Msa1173900:intron | 30.0% | |
| ! | ACCATGAAATTTGGTTCAAA+TGG | + | chr8_1:4615223-4615242 | Msa1173900:intron | 30.0% |
| ACCATTTGAACCAAATTTCA+TGG | - | chr8_1:4615227-4615246 | None:intergenic | 30.0% | |
| ! | GATTACAGTAATCTAGAGTT+CGG | - | chr8_1:4615601-4615620 | None:intergenic | 30.0% |
| ! | TGATAAGATTCGGTTCATAA+GGG | - | chr8_1:4615629-4615648 | None:intergenic | 30.0% |
| ! | TTGATAAGATTCGGTTCATA+AGG | - | chr8_1:4615630-4615649 | None:intergenic | 30.0% |
| ! | TTGTCTTTGAAAAGCTACTT+TGG | + | chr8_1:4615714-4615733 | Msa1173900:intron | 30.0% |
| ! | TGTCTTTGAAAAGCTACTTT+GGG | + | chr8_1:4615715-4615734 | Msa1173900:intron | 30.0% |
| ! | TAGTGTAAGGTACCTTTATT+GGG | - | chr8_1:4615820-4615839 | None:intergenic | 30.0% |
| ACTTGTTTCATAACCATCAA+AGG | + | chr8_1:4616378-4616397 | Msa1173900:intron | 30.0% | |
| ACTTATTTGAGCTTATCTAC+TGG | + | chr8_1:4616414-4616433 | Msa1173900:intron | 30.0% | |
| ! | ACTTTATTTCCAAAAACTCG+AGG | + | chr8_1:4616512-4616531 | Msa1173900:intron | 30.0% |
| ! | ATAAGTTATCCTCGAGTTTT+TGG | - | chr8_1:4616524-4616543 | None:intergenic | 30.0% |
| GAAAAGGTTATCTAATGTGA+AGG | + | chr8_1:4616845-4616864 | Msa1173900:CDS | 30.0% | |
| TTCTTACTTATTCTCTGCTT+TGG | - | chr8_1:4616892-4616911 | None:intergenic | 30.0% | |
| ! | TGATACTTTAAGAGTCTGTT+TGG | - | chr8_1:4617122-4617141 | None:intergenic | 30.0% |
| AGCTCAACTAAGAAAAATTG+AGG | + | chr8_1:4617268-4617287 | Msa1173900:CDS | 30.0% | |
| AAAGATGTGCTTTATCTGTT+TGG | - | chr8_1:4617391-4617410 | None:intergenic | 30.0% | |
| TCATATTCTTACCAGACATT+TGG | + | chr8_1:4617545-4617564 | Msa1173900:intron | 30.0% | |
| CAAGACAATAATTGGATTGA+AGG | - | chr8_1:4617573-4617592 | None:intergenic | 30.0% | |
| GACAAAAGCAAGACAATAAT+TGG | - | chr8_1:4617581-4617600 | None:intergenic | 30.0% | |
| ! | ATTCAATATATGGACTGCAT+AGG | - | chr8_1:4617624-4617643 | None:intergenic | 30.0% |
| CTGAAAACGCTAATATTGAT+AGG | + | chr8_1:4617925-4617944 | Msa1173900:intron | 30.0% | |
| AAACGCTAATATTGATAGGT+CGG | + | chr8_1:4617929-4617948 | Msa1173900:intron | 30.0% | |
| ! | AAATTTTTGAACACTTTGGC+AGG | + | chr8_1:4618016-4618035 | Msa1173900:intron | 30.0% |
| GAGAAAAAGAAAGCAGAATA+TGG | + | chr8_1:4618047-4618066 | Msa1173900:CDS | 30.0% | |
| GTGTGTGAGTGTAAAATTTA+TGG | + | chr8_1:4618305-4618324 | Msa1173900:three_prime_UTR | 30.0% | |
| TATGGAAAGGGAAAATACAT+TGG | + | chr8_1:4618323-4618342 | Msa1173900:three_prime_UTR | 30.0% | |
| ! | AAGAGAACATTTTCTGACAT+TGG | - | chr8_1:4618396-4618415 | None:intergenic | 30.0% |
| TAGTGGAAAGAATCAATGAA+AGG | - | chr8_1:4618552-4618571 | None:intergenic | 30.0% | |
| TTGGTTGTGTAATAATGTAG+TGG | - | chr8_1:4618569-4618588 | None:intergenic | 30.0% | |
| AGATCAACAAAGAACTTGTG+TGG | - | chr8_1:4614042-4614061 | None:intergenic | 35.0% | |
| AGAGAGAGAGAAGAAGTTTA+AGG | - | chr8_1:4614120-4614139 | None:intergenic | 35.0% | |
| CAAAGTAATGAAGCAAAGCA+AGG | - | chr8_1:4614778-4614797 | None:intergenic | 35.0% | |
| ! | CAAGATATGGACAAAGCATT+TGG | - | chr8_1:4614986-4615005 | None:intergenic | 35.0% |
| ! | AATTGAAAAGGCATGCCTAA+CGG | - | chr8_1:4615019-4615038 | None:intergenic | 35.0% |
| TGACATGTTAATATGGGGTA+GGG | + | chr8_1:4615071-4615090 | Msa1173900:intron | 35.0% | |
| TTTCTTTGCCTTGCAAAAGT+TGG | + | chr8_1:4615103-4615122 | Msa1173900:intron | 35.0% | |
| GAGCAAAAACTATAGTTAGC+TGG | - | chr8_1:4615173-4615192 | None:intergenic | 35.0% | |
| TTCGATTACCGAAACAATTC+AGG | + | chr8_1:4615289-4615308 | Msa1173900:intron | 35.0% | |
| TCGATTACCGAAACAATTCA+GGG | + | chr8_1:4615290-4615309 | Msa1173900:intron | 35.0% | |
| GTCAGGAGGTAAATTAAGTT+TGG | - | chr8_1:4615316-4615335 | None:intergenic | 35.0% | |
| ! | TGATAATTTGGAGTTCAGTC+AGG | - | chr8_1:4615333-4615352 | None:intergenic | 35.0% |
| TGACTGAACTCCAAATTATC+AGG | + | chr8_1:4615332-4615351 | Msa1173900:intron | 35.0% | |
| ! | AGTGTAAGGTACCTTTATTG+GGG | - | chr8_1:4615819-4615838 | None:intergenic | 35.0% |
| ! | CTAGTGTAAGGTACCTTTAT+TGG | - | chr8_1:4615821-4615840 | None:intergenic | 35.0% |
| AACTTTCACTCAACAAAGCT+TGG | + | chr8_1:4615849-4615868 | Msa1173900:intron | 35.0% | |
| !!! | GCATTCTTTTTTACAGGTTC+TGG | - | chr8_1:4616253-4616272 | None:intergenic | 35.0% |
| !!! | AGGGATGCATTCTTTTTTAC+AGG | - | chr8_1:4616259-4616278 | None:intergenic | 35.0% |
| ACAAGACTAACCTCTATCAA+GGG | - | chr8_1:4616278-4616297 | None:intergenic | 35.0% | |
| AACAAGACTAACCTCTATCA+AGG | - | chr8_1:4616279-4616298 | None:intergenic | 35.0% | |
| ATAACCATCAAAGGTCTATC+TGG | + | chr8_1:4616387-4616406 | Msa1173900:intron | 35.0% | |
| TCACAATTCTCTATCTTCCT+TGG | + | chr8_1:4616716-4616735 | Msa1173900:intron | 35.0% | |
| AGCACATATTCATGTTACCA+AGG | - | chr8_1:4616736-4616755 | None:intergenic | 35.0% | |
| ATATCGCTCTTGCAGAAATA+GGG | + | chr8_1:4616817-4616836 | Msa1173900:CDS | 35.0% | |
| CAGAAATAGGGAAAGAGAAA+AGG | + | chr8_1:4616829-4616848 | Msa1173900:CDS | 35.0% | |
| ! | GTTATCTAATGTGAAGGCAT+GGG | + | chr8_1:4616851-4616870 | Msa1173900:CDS | 35.0% |
| TATTAATGATGTCAGCGTGT+CGG | - | chr8_1:4617759-4617778 | None:intergenic | 35.0% | |
| TCAACATTGTCAGTTGAGTT+AGG | - | chr8_1:4617899-4617918 | None:intergenic | 35.0% | |
| AAGAGATTAATGGCGAAACT+CGG | - | chr8_1:4617965-4617984 | None:intergenic | 35.0% | |
| TGGTGAGAAAATCAAGAACA+AGG | + | chr8_1:4618067-4618086 | Msa1173900:CDS | 35.0% | |
| TGAGAAAATCAAGAACAAGG+TGG | + | chr8_1:4618070-4618089 | Msa1173900:CDS | 35.0% | |
| !! | CATCATATCAAAAGCATCCA+AGG | - | chr8_1:4618220-4618239 | None:intergenic | 35.0% |
| AATACATTGGAGGAACATGT+TGG | + | chr8_1:4618336-4618355 | Msa1173900:three_prime_UTR | 35.0% | |
| TGAACCAAACTCAGAACCTA+TGG | + | chr8_1:4614185-4614204 | Msa1173900:exon | 40.0% | |
| ! | TTTTCAACAGCATTAACCGG+AGG | - | chr8_1:4614321-4614340 | None:intergenic | 40.0% |
| TGCTGTTGAAAAGAAAGCAG+CGG | + | chr8_1:4614329-4614348 | Msa1173900:CDS | 40.0% | |
| !! | CGGATCACTGATTCAAGATA+TGG | - | chr8_1:4614999-4615018 | None:intergenic | 40.0% |
| TCTTGAATCAGTGATCCGTT+AGG | + | chr8_1:4615001-4615020 | Msa1173900:intron | 40.0% | |
| GTGACATGTTAATATGGGGT+AGG | + | chr8_1:4615070-4615089 | Msa1173900:intron | 40.0% | |
| ! | GAGTCAAACCAACTTTTGCA+AGG | - | chr8_1:4615114-4615133 | None:intergenic | 40.0% |
| TTGTTTCGGTAATCGAACTC+AGG | - | chr8_1:4615286-4615305 | None:intergenic | 40.0% | |
| AGTTTGGCCCTGAATTGTTT+CGG | - | chr8_1:4615300-4615319 | None:intergenic | 40.0% | |
| ! | TAATTTGGAGTTCAGTCAGG+AGG | - | chr8_1:4615330-4615349 | None:intergenic | 40.0% |
| ! | TTTAGAACACTCCGGTTCTA+AGG | - | chr8_1:4615366-4615385 | None:intergenic | 40.0% |
| ! | CCAATGCATTTAGAACACTC+CGG | - | chr8_1:4615374-4615393 | None:intergenic | 40.0% |
| ! | TGTAAGGTACCTTTATTGGG+GGG | - | chr8_1:4615817-4615836 | None:intergenic | 40.0% |
| ! | GTGTAAGGTACCTTTATTGG+GGG | - | chr8_1:4615818-4615837 | None:intergenic | 40.0% |
| ! | AAGGTACCTTACACTAGACT+TGG | + | chr8_1:4615824-4615843 | Msa1173900:intron | 40.0% |
| AGGTACCTTACACTAGACTT+GGG | + | chr8_1:4615825-4615844 | Msa1173900:intron | 40.0% | |
| AGTTTCCCAAGTCTAGTGTA+AGG | - | chr8_1:4615833-4615852 | None:intergenic | 40.0% | |
| AAGAATGCATCCCTTGATAG+AGG | + | chr8_1:4616265-4616284 | Msa1173900:CDS | 40.0% | |
| CAATCCAGATAGACCTTTGA+TGG | - | chr8_1:4616394-4616413 | None:intergenic | 40.0% | |
| CACAGTGCTAATATATGCCT+AGG | + | chr8_1:4616683-4616702 | Msa1173900:intron | 40.0% | |
| ATTGTGACAGCAAGAAACCT+AGG | - | chr8_1:4616703-4616722 | None:intergenic | 40.0% | |
| TTGAGGAGAGGTTTCATAAG+AGG | - | chr8_1:4616773-4616792 | None:intergenic | 40.0% | |
| GATATCGCTCTTGCAGAAAT+AGG | + | chr8_1:4616816-4616835 | Msa1173900:intron | 40.0% | |
| GGTTATCTAATGTGAAGGCA+TGG | + | chr8_1:4616850-4616869 | Msa1173900:CDS | 40.0% | |
| GATGTGCTTTATCTGTTTGG+TGG | - | chr8_1:4617388-4617407 | None:intergenic | 40.0% | |
| GATTGAAGGTTCCAAATGTC+TGG | - | chr8_1:4617559-4617578 | None:intergenic | 40.0% | |
| GTTGAGTTAGGTATGAAGCA+CGG | - | chr8_1:4617887-4617906 | None:intergenic | 40.0% | |
| AATCAAGAACAAGGTGGCAA+TGG | + | chr8_1:4618076-4618095 | Msa1173900:CDS | 40.0% | |
| AATGGTTCACAAACAAGCAG+AGG | + | chr8_1:4618094-4618113 | Msa1173900:CDS | 40.0% | |
| GCTGCAAAACATAATGCAAC+AGG | + | chr8_1:4618176-4618195 | Msa1173900:CDS | 40.0% | |
| ACTGTTCCAAAGAAACTCCT+TGG | + | chr8_1:4618200-4618219 | Msa1173900:CDS | 40.0% | |
| AAGCATCCAAGGAGTTTCTT+TGG | - | chr8_1:4618209-4618228 | None:intergenic | 40.0% | |
| GGAAAGGGAAAATACATTGG+AGG | + | chr8_1:4618326-4618345 | Msa1173900:three_prime_UTR | 40.0% | |
| !! | TCAGCCATAGGTTCTGAGTT+TGG | - | chr8_1:4614192-4614211 | None:intergenic | 45.0% |
| !! | TTGGTTTGGAGTTCAGCCAT+AGG | - | chr8_1:4614204-4614223 | None:intergenic | 45.0% |
| GAACTGCTTCTTGCTTGGTT+TGG | - | chr8_1:4614218-4614237 | None:intergenic | 45.0% | |
| !! | CACAAAGGCACTTGTTGTTG+TGG | + | chr8_1:4614374-4614393 | Msa1173900:CDS | 45.0% |
| GGAAAGGGGTCCTGATAATT+TGG | - | chr8_1:4615345-4615364 | None:intergenic | 45.0% | |
| !! | ACACTCCGGTTCTAAGGAAA+GGG | - | chr8_1:4615360-4615379 | None:intergenic | 45.0% |
| !! | AACACTCCGGTTCTAAGGAA+AGG | - | chr8_1:4615361-4615380 | None:intergenic | 45.0% |
| ! | CCGGAGTGTTCTAAATGCAT+TGG | + | chr8_1:4615371-4615390 | Msa1173900:intron | 45.0% |
| ! | TTTGGGACCAGTGTGTCAAA+AGG | + | chr8_1:4615732-4615751 | Msa1173900:intron | 45.0% |
| ! | TCTCTCACCTTTTGACACAC+TGG | - | chr8_1:4615742-4615761 | None:intergenic | 45.0% |
| CCTTTATTGGGGGGGATTTA+TGG | - | chr8_1:4615808-4615827 | None:intergenic | 45.0% | |
| CCATAAATCCCCCCCAATAA+AGG | + | chr8_1:4615805-4615824 | Msa1173900:intron | 45.0% | |
| ! | GTAAGGTACCTTTATTGGGG+GGG | - | chr8_1:4615816-4615835 | None:intergenic | 45.0% |
| AGACCTGTCATTGCAACAGT+GGG | - | chr8_1:4615979-4615998 | None:intergenic | 45.0% | |
| AAGACCTGTCATTGCAACAG+TGG | - | chr8_1:4615980-4615999 | None:intergenic | 45.0% | |
| ACCTAACTCCCTATGAAGCA+CGG | + | chr8_1:4617706-4617725 | Msa1173900:intron | 45.0% | |
| ACACGACACATGTCTGATAC+CGG | + | chr8_1:4617838-4617857 | Msa1173900:intron | 45.0% | |
| TAATGGCGAAACTCGGATGA+AGG | - | chr8_1:4617958-4617977 | None:intergenic | 45.0% | |
| AACACTTTGGCAGGAGCAAT+TGG | + | chr8_1:4618025-4618044 | Msa1173900:intron | 45.0% | |
| ACGTGCTGAAGCAATTCTCA+AGG | + | chr8_1:4618142-4618161 | Msa1173900:CDS | 45.0% | |
| TGAAGCAATTCTCAAGGCAG+AGG | + | chr8_1:4618148-4618167 | Msa1173900:CDS | 45.0% | |
| GAACATGTTGGACAGCACAA+AGG | + | chr8_1:4618348-4618367 | Msa1173900:three_prime_UTR | 45.0% | |
| TGGACAGCACAAAGGATCTT+TGG | + | chr8_1:4618356-4618375 | Msa1173900:three_prime_UTR | 45.0% | |
| AGCAGGAACTGCTTCTTGCT+TGG | - | chr8_1:4614223-4614242 | None:intergenic | 50.0% | |
| CTCAGCTAGAGGTGGTTCAA+CGG | - | chr8_1:4614295-4614314 | None:intergenic | 50.0% | |
| AGGACCCCTTTCCTTAGAAC+CGG | + | chr8_1:4615352-4615371 | Msa1173900:intron | 50.0% | |
| !! | CACTCCGGTTCTAAGGAAAG+GGG | - | chr8_1:4615359-4615378 | None:intergenic | 50.0% |
| ATTGGGGGGGATTTATGGTG+AGG | - | chr8_1:4615803-4615822 | None:intergenic | 50.0% | |
| TGTCCCACTGTTGCAATGAC+AGG | + | chr8_1:4615973-4615992 | Msa1173900:intron | 50.0% | |
| AGCTCTCTACTGTTGCTGCT+TGG | + | chr8_1:4617219-4617238 | Msa1173900:CDS | 50.0% | |
| ! | GCTCTCTACTGTTGCTGCTT+GGG | + | chr8_1:4617220-4617239 | Msa1173900:CDS | 50.0% |
| TCCGTGCTTCATAGGGAGTT+AGG | - | chr8_1:4617710-4617729 | None:intergenic | 50.0% | |
| CTCCCTATGAAGCACGGATA+CGG | + | chr8_1:4617712-4617731 | Msa1173900:intron | 50.0% | |
| GTCCGTATCCGTGCTTCATA+GGG | - | chr8_1:4617717-4617736 | None:intergenic | 50.0% | |
| TGTCCGTATCCGTGCTTCAT+AGG | - | chr8_1:4617718-4617737 | None:intergenic | 50.0% | |
| CACGACACATGTCTGATACC+GGG | + | chr8_1:4617839-4617858 | Msa1173900:intron | 50.0% | |
| CGTTGAACCACCTCTAGCTG+AGG | + | chr8_1:4614293-4614312 | Msa1173900:CDS | 55.0% | |
| TTTGTGTCATCTGCCGCAGG+TGG | - | chr8_1:4614360-4614379 | None:intergenic | 55.0% | |
| ACCTGCGGCAGATGACACAA+AGG | + | chr8_1:4614359-4614378 | Msa1173900:CDS | 55.0% | |
| TCCTAGGATTAGGCGTGTCC+CGG | - | chr8_1:4617860-4617879 | None:intergenic | 55.0% | |
| TATGAAGCACGGACGCTCCT+AGG | - | chr8_1:4617876-4617895 | None:intergenic | 55.0% | |
| AGCAGTTCCTGCTCCTGCTC+CGG | + | chr8_1:4614230-4614249 | Msa1173900:CDS | 60.0% | |
| GCTGGAGTTGGAACTGGTGC+CGG | - | chr8_1:4614264-4614283 | None:intergenic | 60.0% | |
| GCAGGAGCTGGAGTTGGAAC+TGG | - | chr8_1:4614270-4614289 | None:intergenic | 60.0% | |
| AGAGGTGGTTCAACGGCAGC+AGG | - | chr8_1:4614288-4614307 | None:intergenic | 60.0% | |
| ! | ACCTCTAGCTGAGGCACCTC+CGG | + | chr8_1:4614302-4614321 | Msa1173900:CDS | 60.0% |
| GCCTTTGTGTCATCTGCCGC+AGG | - | chr8_1:4614363-4614382 | None:intergenic | 60.0% | |
| ACCGGGACACGCCTAATCCT+AGG | + | chr8_1:4617856-4617875 | Msa1173900:intron | 60.0% | |
| GCACGGACGCTCCTAGGATT+AGG | - | chr8_1:4617870-4617889 | None:intergenic | 60.0% | |
| !! | GTTGGAACTGGTGCCGGTGC+CGG | - | chr8_1:4614258-4614277 | None:intergenic | 65.0% |
| ACGGCAGCAGGAGCTGGAGT+TGG | - | chr8_1:4614276-4614295 | None:intergenic | 65.0% | |
| GGTTCAACGGCAGCAGGAGC+TGG | - | chr8_1:4614282-4614301 | None:intergenic | 65.0% | |
| !! | GGAGGTGCCTCAGCTAGAGG+TGG | - | chr8_1:4614303-4614322 | None:intergenic | 65.0% |
| !! | ACCGGAGGTGCCTCAGCTAG+AGG | - | chr8_1:4614306-4614325 | None:intergenic | 65.0% |
| GTGTCATCTGCCGCAGGTGG+CGG | - | chr8_1:4614357-4614376 | None:intergenic | 65.0% | |
| TCCTGCTCCTGCTCCGGCAC+CGG | + | chr8_1:4614236-4614255 | Msa1173900:CDS | 70.0% | |
| !! | TCCTGCTCCGGCACCGGCAC+CGG | + | chr8_1:4614242-4614261 | Msa1173900:CDS | 75.0% |
| !! | ACTGGTGCCGGTGCCGGTGC+CGG | - | chr8_1:4614252-4614271 | None:intergenic | 75.0% |
| AGCAGCGGCACCGCCACCTG+CGG | + | chr8_1:4614344-4614363 | Msa1173900:CDS | 75.0% | |
| !! | GCCGGTGCCGGAGCAGGAGC+AGG | - | chr8_1:4614240-4614259 | None:intergenic | 80.0% |
| !!! | GCCGGTGCCGGTGCCGGAGC+AGG | - | chr8_1:4614246-4614265 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 4614018 | 4618594 | 4614018 | ID=Msa1173900;Name=Msa1173900 |
| chr8_1 | mRNA | 4614018 | 4618594 | 4614018 | ID=Msa1173900-mRNA-1;Parent=Msa1173900;Name=Msa1173900-mRNA-1;_AED=0.02;_eAED=0.02;_QI=162|1|1|1|0.8|0.66|6|362|202 |
| chr8_1 | exon | 4614018 | 4614129 | 4614018 | ID=Msa1173900-mRNA-1:exon:1615;Parent=Msa1173900-mRNA-1 |
| chr8_1 | exon | 4614154 | 4614405 | 4614154 | ID=Msa1173900-mRNA-1:exon:1616;Parent=Msa1173900-mRNA-1 |
| chr8_1 | exon | 4616245 | 4616286 | 4616245 | ID=Msa1173900-mRNA-1:exon:1617;Parent=Msa1173900-mRNA-1 |
| chr8_1 | exon | 4616817 | 4616904 | 4616817 | ID=Msa1173900-mRNA-1:exon:1618;Parent=Msa1173900-mRNA-1 |
| chr8_1 | exon | 4617208 | 4617289 | 4617208 | ID=Msa1173900-mRNA-1:exon:1619;Parent=Msa1173900-mRNA-1 |
| chr8_1 | exon | 4618038 | 4618594 | 4618038 | ID=Msa1173900-mRNA-1:exon:1620;Parent=Msa1173900-mRNA-1 |
| chr8_1 | five_prime_UTR | 4614018 | 4614129 | 4614018 | ID=Msa1173900-mRNA-1:five_prime_utr;Parent=Msa1173900-mRNA-1 |
| chr8_1 | five_prime_UTR | 4614154 | 4614203 | 4614154 | ID=Msa1173900-mRNA-1:five_prime_utr;Parent=Msa1173900-mRNA-1 |
| chr8_1 | CDS | 4614204 | 4614405 | 4614204 | ID=Msa1173900-mRNA-1:cds;Parent=Msa1173900-mRNA-1 |
| chr8_1 | CDS | 4616245 | 4616286 | 4616245 | ID=Msa1173900-mRNA-1:cds;Parent=Msa1173900-mRNA-1 |
| chr8_1 | CDS | 4616817 | 4616904 | 4616817 | ID=Msa1173900-mRNA-1:cds;Parent=Msa1173900-mRNA-1 |
| chr8_1 | CDS | 4617208 | 4617289 | 4617208 | ID=Msa1173900-mRNA-1:cds;Parent=Msa1173900-mRNA-1 |
| chr8_1 | CDS | 4618038 | 4618232 | 4618038 | ID=Msa1173900-mRNA-1:cds;Parent=Msa1173900-mRNA-1 |
| chr8_1 | three_prime_UTR | 4618233 | 4618594 | 4618233 | ID=Msa1173900-mRNA-1:three_prime_utr;Parent=Msa1173900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
