AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0628470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0628470 MtrunA17_Chr4g0004281 95.334 1286 59 1 1 1286 1 1285 0.0 2506
Msa0628470 MtrunA17_Chr4g0069501 42.000 100 57 1 1098 1196 31 130 4.35e-16 77.8
Msa0628470 MtrunA17_Chr7g0254211 33.136 169 84 5 1100 1256 8 159 3.90e-15 75.1
Msa0628470 MtrunA17_Chr2g0302351 43.000 100 56 1 1098 1196 30 129 1.04e-14 73.9
Msa0628470 MtrunA17_Chr1g0191001 37.000 100 62 1 1098 1196 14 113 2.62e-13 69.3
Msa0628470 MtrunA17_Chr1g0190991 41.053 95 53 2 1102 1196 36 127 2.35e-12 67.0
Msa0628470 MtrunA17_Chr1g0190971 38.095 105 61 3 1102 1205 23 124 1.40e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0628470 AT1G68720.1 42.144 681 282 20 684 1291 666 1307 9.03e-122 410
Msa0628470 AT1G48175.1 32.143 168 86 4 1101 1256 12 163 6.37e-17 80.5
Msa0628470 AT1G48175.4 32.143 168 86 4 1101 1256 12 163 6.37e-17 80.5
Msa0628470 AT5G28050.1 43.564 101 56 1 1097 1196 29 129 1.04e-16 80.1
Msa0628470 AT5G28050.2 43.564 101 56 1 1097 1196 48 148 1.27e-16 80.5
Msa0628470 AT5G28050.3 43.564 101 56 1 1097 1196 134 234 2.66e-16 81.6
Msa0628470 AT1G48175.6 29.936 157 82 4 1112 1256 8 148 1.05e-11 65.1
Msa0628470 AT1G48175.2 29.936 157 82 4 1112 1256 8 148 1.05e-11 65.1
Msa0628470 AT1G48175.5 29.936 157 82 4 1112 1256 8 148 1.05e-11 65.1
Msa0628470 AT1G48175.3 29.936 157 82 4 1112 1256 8 148 1.05e-11 65.1
Msa0628470 AT3G05300.1 42.683 82 46 1 1137 1218 1 81 1.26e-11 63.2

Find 324 sgRNAs with CRISPR-Local

Find 693 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCCATTCCACTGGGTTTC+TGG 0.034322 4_3:-9155213 Msa0628470:CDS
CCAAATATCACCGGCCTTTC+TGG 0.057133 4_3:+9154359 None:intergenic
TAAAATTTCCTATATAATTT+TGG 0.059918 4_3:+9156179 None:intergenic
CGGGATTGCGATTTGGTTTC+TGG 0.092007 4_3:+9158218 None:intergenic
GATCCACTCTCCAATTTATT+TGG 0.133180 4_3:+9154777 None:intergenic
GCTGGTTCTTCCGCTTCTTC+TGG 0.146929 4_3:-9155014 Msa0628470:CDS
GAATACATTCCCTCGTTATT+TGG 0.168619 4_3:+9149104 None:intergenic
TAAACTTCATGCAGAATTAT+TGG 0.178209 4_3:+9149231 None:intergenic
GTAAAGCCTTGTCTTCTAAA+TGG 0.191983 4_3:-9157507 Msa0628470:CDS
GCTGACCGAGGGAACCTTTC+AGG 0.194009 4_3:-9156701 Msa0628470:CDS
ATCATCTTCTCCAAATAAAT+TGG 0.201367 4_3:-9154787 Msa0628470:CDS
CCAGAAAGGCCGGTGATATT+TGG 0.211490 4_3:-9154359 Msa0628470:CDS
CAAATTATTTATCTTCTTCT+TGG 0.216020 4_3:+9157146 None:intergenic
GGAAGAAAAGGAATTGAAAT+TGG 0.225303 4_3:-9158146 Msa0628470:five_prime_UTR
ATTACTATTTAAATCTAAAA+AGG 0.233333 4_3:-9148998 Msa0628470:three_prime_UTR
ATCAGCTCCAAGAAGCTTAT+TGG 0.248076 4_3:+9150957 None:intergenic
TTTCGTTCATGTTGTTATTC+TGG 0.248250 4_3:-9157794 Msa0628470:five_prime_UTR
ATGACTTATCACTTTCATAT+TGG 0.251435 4_3:+9155483 None:intergenic
GACAGTGAGACATGGCATTC+TGG 0.256070 4_3:-9154957 Msa0628470:CDS
TACTGTTCTCGAGTTCCTTA+TGG 0.265877 4_3:-9157417 Msa0628470:CDS
AAACGTCGTGCGCCTTCTTT+TGG 0.268370 4_3:+9156791 None:intergenic
CTGCTCAAGTTCAACATTAT+AGG 0.268636 4_3:+9154425 None:intergenic
ATTGAGACAACTTTATTATC+AGG 0.279444 4_3:-9156454 Msa0628470:CDS
GAGTAGCCATTGAAAGATAA+AGG 0.281452 4_3:+9157627 None:intergenic
GTTCATGAAGGAAGCACTTT+TGG 0.289222 4_3:-9154385 Msa0628470:CDS
GCATTCTCTTCTCAAGTCTA+TGG 0.289387 4_3:+9157044 None:intergenic
TTCATCTTTCGTAGAACATT+TGG 0.290301 4_3:-9156563 Msa0628470:CDS
TGACTTATCACTTTCATATT+GGG 0.291342 4_3:+9155484 None:intergenic
TTTGCAGCTGACACCATATA+TGG 0.292585 4_3:+9157659 None:intergenic
CATGGAAGTGCAGCATAATA+TGG 0.294890 4_3:-9156905 Msa0628470:CDS
TTCTTGGAGCTGATGGCAGC+TGG 0.305531 4_3:-9150948 Msa0628470:CDS
GATTTGAAAGTCACTACTTC+TGG 0.311125 4_3:-9154690 Msa0628470:CDS
AGAATTATTGGCATGTTATT+CGG 0.312975 4_3:+9149243 None:intergenic
TGTAATGTTCTGTTTGTAAG+AGG 0.317358 4_3:-9149809 Msa0628470:exon
CCAAATCCATTATCTATTAG+AGG 0.320630 4_3:-9154648 Msa0628470:CDS
GTTCCTTATGGTCTTGTTAG+AGG 0.320842 4_3:-9157405 Msa0628470:CDS
CAATGGTCTTCTCTCCTTTA+CGG 0.322163 4_3:+9156056 None:intergenic
CGAAGACACATTCTTCGATT+TGG 0.323600 4_3:+9157185 None:intergenic
GAAGGATGATGGGTAGTAAT+AGG 0.323794 4_3:+9149865 None:intergenic
AGCAGGACTTCTTCCGGAAT+TGG 0.326191 4_3:+9155526 None:intergenic
CTGGTTCTTCCGCTTCTTCT+GGG 0.327270 4_3:-9155013 Msa0628470:CDS
AAAGAAGGCACAAGAGCTTT+AGG 0.327638 4_3:-9158167 Msa0628470:five_prime_UTR
GATATCAGAAACACGTTTGC+AGG 0.328095 4_3:-9156275 Msa0628470:CDS
GAGCTGATGGCAGCTGGGTT+AGG 0.329655 4_3:-9150942 Msa0628470:intron
CCTCTAATAGATAATGGATT+TGG 0.332403 4_3:+9154648 None:intergenic
AGCCATTCCACTGGGTTTCT+GGG 0.342228 4_3:-9155212 Msa0628470:CDS
AGTTAAGTTGAGAACCCTTT+TGG 0.342917 4_3:-9149377 Msa0628470:three_prime_UTR
CGGCATCACTGATTCAGTTC+TGG 0.343595 4_3:+9154578 None:intergenic
GAAGCTTCAAGGTAGATATC+AGG 0.345357 4_3:+9155575 None:intergenic
TTGAAATCAAAGAAAACATT+TGG 0.345378 4_3:-9156319 Msa0628470:CDS
AAGAAGGGTTCCTAGATCTT+TGG 0.348751 4_3:+9155651 None:intergenic
AATCTTGGAGTTGGTCGTTT+TGG 0.349916 4_3:+9149143 None:intergenic
GCAGTTTCATTGTTGATCTC+TGG 0.354759 4_3:+9155116 None:intergenic
TTTACGATTTCTGCTGCAAT+AGG 0.356264 4_3:+9154621 None:intergenic
CAGAAAGGCCGGTGATATTT+GGG 0.361207 4_3:-9154358 Msa0628470:CDS
TCTGCTTTGTATGCCAATTC+CGG 0.363239 4_3:-9155539 Msa0628470:CDS
ATGAATTATCTTCCTCACTA+TGG 0.371390 4_3:+9156581 None:intergenic
ATTTAGAAGACAAGGCTTTA+CGG 0.371511 4_3:+9157509 None:intergenic
TAAATAGTTGGCTTGAATCT+TGG 0.372587 4_3:+9149128 None:intergenic
ATTGCAAACATTTCTTTCAT+TGG 0.373912 4_3:+9157359 None:intergenic
GTGCGCTGGTGCCATTCTTC+AGG 0.375027 4_3:-9151010 Msa0628470:CDS
TTAAGTATGATATTTCTTCC+TGG 0.378194 4_3:+9155924 None:intergenic
TTTAGAAGACAAGGCTTTAC+GGG 0.378920 4_3:+9157510 None:intergenic
GACAAACATGAAAAGTTTGT+TGG 0.378937 4_3:-9156370 Msa0628470:CDS
AAGTAGAAGAAGCAGAATAA+AGG 0.379072 4_3:-9157334 Msa0628470:CDS
GAGCTGAAACTCTACCCATT+TGG 0.383663 4_3:+9155627 None:intergenic
AGCTGAAACTCTACCCATTT+GGG 0.383896 4_3:+9155628 None:intergenic
GGAGCTCCCAATAAGCTTCT+TGG 0.384691 4_3:-9150964 Msa0628470:CDS
TCGTCACTGTCAAAGCCTTC+CGG 0.391785 4_3:+9155809 None:intergenic
TGAACATGTCAGCACTTTAC+CGG 0.392978 4_3:-9155828 Msa0628470:CDS
CTTTGAGAATCTCCATTCCT+AGG 0.399868 4_3:+9149461 None:intergenic
GGTTGCCCTCTAATAGATAA+TGG 0.400040 4_3:+9154642 None:intergenic
TCAGCTCCAAGAAGCTTATT+GGG 0.401024 4_3:+9150958 None:intergenic
CCGTCGCCGGGATTGCGATT+TGG 0.402947 4_3:+9158211 None:intergenic
ATGAGTTTGTGGAGAGGGTC+AGG 0.403422 4_3:-9155376 Msa0628470:CDS
AGAAGCTCCCAAAATTATAT+AGG 0.405934 4_3:-9156187 Msa0628470:CDS
AAAACATTTGGTGGCAATGA+AGG 0.406471 4_3:-9156307 Msa0628470:CDS
TGGTAATGGTGATTGATAAC+TGG 0.407313 4_3:+9149181 None:intergenic
TCCGCTTCTTCTGGGAGATC+AGG 0.407778 4_3:-9155005 Msa0628470:CDS
GGATCTACAATGCATGAATC+TGG 0.413189 4_3:-9156637 Msa0628470:CDS
ACAATGCATGAATCTGGTTA+TGG 0.414696 4_3:-9156631 Msa0628470:CDS
TAGGAACCCTTCTTCCCAAA+TGG 0.415037 4_3:-9155642 Msa0628470:CDS
TCAATGGCTACTCAAATCTA+TGG 0.415308 4_3:-9157617 Msa0628470:CDS
AAACCAATTGTTAAAAGAAC+AGG 0.415902 4_3:-9155092 Msa0628470:CDS
CAACAAGAGATAGAAGTTAC+TGG 0.416563 4_3:-9155329 Msa0628470:CDS
TAAAGCCTTGTCTTCTAAAT+GGG 0.417559 4_3:-9157506 Msa0628470:CDS
GAGTTCTCCTCCTATCAGTT+TGG 0.418358 4_3:+9155876 None:intergenic
TCGTTCCCTTTATCTTTCAA+TGG 0.419477 4_3:-9157633 Msa0628470:CDS
TGATTTCAAACTTTCCGTTC+CGG 0.420040 4_3:+9156333 None:intergenic
TCAGTCTTCACTGGAGCAAC+GGG 0.420309 4_3:+9154546 None:intergenic
CAAGAGATAGGTTTGATGAC+TGG 0.420678 4_3:-9154455 Msa0628470:CDS
AGACACATCTCCCTCACTTT+GGG 0.420698 4_3:+9154854 None:intergenic
GAACCCTGTGCAATGTGCGC+TGG 0.420731 4_3:-9151024 Msa0628470:CDS
TTTGGTGGCTCGGTGAGATC+TGG 0.421088 4_3:+9149161 None:intergenic
GGGCAGGAGCGTGAGGAAAC+TGG 0.421629 4_3:-9154936 Msa0628470:CDS
GTCTCACTGTCAGATTTGTT+TGG 0.423050 4_3:+9154969 None:intergenic
GAGACACTTTCTCCTCCATC+AGG 0.423969 4_3:+9150033 None:intergenic
CATTTCGTCAGAAATTCCTT+TGG 0.426633 4_3:+9155187 None:intergenic
CTAATGACCACCAAAGATCT+AGG 0.426832 4_3:-9155661 Msa0628470:CDS
TCTGGAGTCATGAAAATAGA+AGG 0.427451 4_3:+9155452 None:intergenic
GTGCATCAGATAACACTGTT+TGG 0.427745 4_3:-9157772 Msa0628470:five_prime_UTR
TGCACAAGAACAGCACCAAC+AGG 0.427907 4_3:+9154330 None:intergenic
AGTAGCCATTGAAAGATAAA+GGG 0.428364 4_3:+9157628 None:intergenic
TTCCAGAGTAGAAGAGTTAC+GGG 0.428597 4_3:-9154200 Msa0628470:intron
ACAGTGAGACATGGCATTCT+GGG 0.429559 4_3:-9154956 Msa0628470:CDS
GTGATACTTCAGAAAACAGT+TGG 0.433062 4_3:+9156008 None:intergenic
TGGAACGGGTGAACTGGTGC+AGG 0.433871 4_3:+9149991 None:intergenic
TACTTGGTGCAGATATTGAT+TGG 0.435337 4_3:-9156750 Msa0628470:CDS
GCTCATGTTGAACAAACTGC+TGG 0.437371 4_3:-9155608 Msa0628470:CDS
AAAGTCAGGTTTCAAGAGAT+AGG 0.438920 4_3:-9154467 Msa0628470:CDS
TGAGTAACTTGGAAGGATGA+TGG 0.439700 4_3:+9149854 None:intergenic
TCGTTATTTGGCTAAATAGT+TGG 0.439734 4_3:+9149116 None:intergenic
GAGAGTGGATCAACATCAAT+AGG 0.441001 4_3:-9154765 Msa0628470:CDS
AAACATAGCAGGACTTCTTC+CGG 0.441312 4_3:+9155520 None:intergenic
CTTTGGGTATAATGAGTACC+TGG 0.444332 4_3:+9154870 None:intergenic
TGCATCAGATAACACTGTTT+GGG 0.445137 4_3:-9157771 Msa0628470:five_prime_UTR
TCTGAAGTATCACAAGTTCA+TGG 0.445560 4_3:-9155998 Msa0628470:CDS
CGGCGCCGATCTCAAACTTC+CGG 0.445696 4_3:+9158111 None:intergenic
AGCCACTTTCTGAAGCTTCA+AGG 0.447809 4_3:+9155564 None:intergenic
CTTCTTGGCTTCCGTTCTGT+TGG 0.449843 4_3:+9157161 None:intergenic
GTGGCAATGAAGGGAGTCTT+GGG 0.450769 4_3:-9156297 Msa0628470:CDS
TAGATGAGTTGGATATTTCA+AGG 0.454189 4_3:+9156404 None:intergenic
TTCCTCTCCAGCAGCATATG+AGG 0.455351 4_3:+9154740 None:intergenic
CTGAAAGGACCTCTGATACT+AGG 0.455541 4_3:-9156144 Msa0628470:CDS
TCTTCATATGCACAAGAGTC+TGG 0.456007 4_3:-9156487 Msa0628470:CDS
AGGCTTTACGGGTACTCTAT+AGG 0.457317 4_3:+9157521 None:intergenic
CTACATGTTAGTAAATGAAA+TGG 0.457342 4_3:+9149278 None:intergenic
ATACTTAAGTTCACATGAAA+GGG 0.458228 4_3:-9155909 Msa0628470:CDS
GTCTGACACTAAAATATTGA+AGG 0.460948 4_3:-9154835 Msa0628470:CDS
TTTGAGTTCTGCTCAGGGAG+TGG 0.462301 4_3:-9156089 Msa0628470:CDS
TCTTATTACACACTCTCGTC+CGG 0.463180 4_3:-9156943 Msa0628470:CDS
TTCGGATGGAACGGGTGAAC+TGG 0.463634 4_3:+9149985 None:intergenic
AGTGCAGCATAATATGGGTT+TGG 0.463901 4_3:-9156899 Msa0628470:CDS
AACAAGGCATACATTCAAAC+AGG 0.464243 4_3:-9156529 Msa0628470:CDS
GGTGGCAATGAAGGGAGTCT+TGG 0.465096 4_3:-9156298 Msa0628470:CDS
CAGACACATCTCCCTCACTT+TGG 0.465880 4_3:+9154853 None:intergenic
CAAAATAAATGACACTGAAA+AGG 0.466087 4_3:-9157022 Msa0628470:CDS
GAAGTTTCAGCGGAAAAGTC+AGG 0.466303 4_3:-9154481 Msa0628470:CDS
ACAAGAGCTTTAGGAAGAAA+AGG 0.466456 4_3:-9158158 Msa0628470:five_prime_UTR
AAATTGGAATCTGCAGCAAC+CGG 0.467125 4_3:-9158130 Msa0628470:five_prime_UTR
AAAGGAAAACATATTGAAGT+TGG 0.467406 4_3:-9154810 Msa0628470:CDS
CAGAAACCCAGTGGAATGGC+TGG 0.470507 4_3:+9155214 None:intergenic
TGGAAAAGCTTCTATTTCAC+AGG 0.471263 4_3:-9156611 Msa0628470:CDS
TCCCGGCGACGGTAGCTGAT+AGG 0.472550 4_3:-9158200 Msa0628470:five_prime_UTR
GCAGCAGAAATCGTAAATAT+CGG 0.473573 4_3:-9154615 Msa0628470:CDS
TTCATCTCCGCCGATGGAGG+TGG 0.474138 4_3:+9149411 None:intergenic
CATATATTGGTTCTCTCTTG+TGG 0.474337 4_3:+9156669 None:intergenic
CTTCAAAACATCTCAACTCA+TGG 0.474375 4_3:-9154138 Msa0628470:CDS
TCCTATCAGCTACCGTCGCC+GGG 0.474473 4_3:+9158199 None:intergenic
ACTCTACCCATTTGGGAAGA+AGG 0.474493 4_3:+9155635 None:intergenic
CCTAGCTCAGTTGTAATTGA+AGG 0.475046 4_3:-9157746 Msa0628470:five_prime_UTR
TTCAGTCTTCACTGGAGCAA+CGG 0.475325 4_3:+9154545 None:intergenic
ACGTAAAGGAAGAATTCAAC+AGG 0.477521 4_3:-9156825 Msa0628470:CDS
GTTCTTCCCAAACTGAAGAA+AGG 0.477710 4_3:-9155697 Msa0628470:CDS
GTTCCAGAGTAGAAGAGTTA+CGG 0.478012 4_3:-9154201 Msa0628470:intron
GGCACCAGCGCACATTGCAC+AGG 0.478111 4_3:+9151020 None:intergenic
CTCTACCCATTTGGGAAGAA+GGG 0.479101 4_3:+9155636 None:intergenic
ATGACTCCAGAGGATGTGCT+TGG 0.479634 4_3:-9155440 Msa0628470:CDS
CACGAGTCCAGCCATTCCAC+TGG 0.483088 4_3:-9155221 Msa0628470:CDS
ATAATCAGATGAACAGTTCA+AGG 0.483218 4_3:-9155280 Msa0628470:CDS
TACCTTGAAGCTTCAGAAAG+TGG 0.487542 4_3:-9155566 Msa0628470:CDS
CTCTATTACATCCTCTGTTG+TGG 0.488326 4_3:+9156210 None:intergenic
TGTGGTATCAGTTTCCTGAA+AGG 0.488618 4_3:+9156687 None:intergenic
TGATGGGTAGTAATAGGAAG+TGG 0.489523 4_3:+9149871 None:intergenic
CTGATATTGTTCAATTACGT+TGG 0.490682 4_3:-9155046 Msa0628470:CDS
GAAAAGGAAGCCTTTACAAA+AGG 0.490715 4_3:-9157006 Msa0628470:CDS
ATAGGCACCTCATATGCTGC+TGG 0.491367 4_3:-9154747 Msa0628470:CDS
AACCAATATATGCATCGAAA+AGG 0.491474 4_3:-9156658 Msa0628470:CDS
CCAGACATTTCAGTCTTCAC+TGG 0.493135 4_3:+9154537 None:intergenic
TTCCTTCTTGAAGAGTATGT+TGG 0.494766 4_3:-9149333 Msa0628470:three_prime_UTR
AAATCAAAGAAAACATTTGG+TGG 0.494976 4_3:-9156316 Msa0628470:CDS
AAGAGATAGGTTTGATGACT+GGG 0.495697 4_3:-9154454 Msa0628470:CDS
AGGAACCCTTCTTCCCAAAT+GGG 0.497339 4_3:-9155641 Msa0628470:CDS
CTGAAGTATCACAAGTTCAT+GGG 0.498078 4_3:-9155997 Msa0628470:CDS
CCTTCAATTACAACTGAGCT+AGG 0.500064 4_3:+9157746 None:intergenic
CAGAAACCAAATCGCAATCC+CGG 0.503959 4_3:-9158217 Msa0628470:five_prime_UTR
ACAGTTTGTTGATGAGTTTG+TGG 0.505305 4_3:-9155387 Msa0628470:CDS
ATCTACTCTTGCCTGAAGAA+TGG 0.505447 4_3:+9150999 None:intergenic
GATTCATCAGAAGCAAATGA+AGG 0.505613 4_3:+9157261 None:intergenic
ATCCTATCAGCTACCGTCGC+CGG 0.509845 4_3:+9158198 None:intergenic
TGAGACATGGCATTCTGGGC+AGG 0.511222 4_3:-9154952 Msa0628470:CDS
GAACCTCTAACAAGACCATA+AGG 0.511250 4_3:+9157402 None:intergenic
TGTTGATGAGTTTGTGGAGA+GGG 0.511372 4_3:-9155381 Msa0628470:CDS
TTGTATCTTATTGAGTAACT+TGG 0.511828 4_3:+9149843 None:intergenic
ATGGAAGTGCAGCATAATAT+GGG 0.511990 4_3:-9156904 Msa0628470:CDS
AAGGAATTTCTGACGAAATG+TGG 0.513900 4_3:-9155184 Msa0628470:CDS
TCTGTCTTTATCATGTGCAA+TGG 0.514310 4_3:+9156039 None:intergenic
CTCCACAGCTCACGCAGAGA+TGG 0.514629 4_3:-9154176 Msa0628470:CDS
AATAAGCTTCTTGGAGCTGA+TGG 0.515184 4_3:-9150955 Msa0628470:CDS
TCTTGGAGCTGATGGCAGCT+GGG 0.516527 4_3:-9150947 Msa0628470:CDS
AATAAAGAAAGAATTGTACT+TGG 0.520363 4_3:-9156766 Msa0628470:CDS
GCTGAACCAAGCACATCCTC+TGG 0.522458 4_3:+9155434 None:intergenic
TCACATGCGAACTCATGAAA+AGG 0.523364 4_3:-9149306 Msa0628470:three_prime_UTR
CTCAACCCATTTAGAAGACA+AGG 0.524520 4_3:+9157501 None:intergenic
AACCACATCACTCGGTGGGG+TGG 0.524881 4_3:-9157723 Msa0628470:five_prime_UTR
CATGTCACTCTCAAAATCTC+CGG 0.525612 4_3:+9156924 None:intergenic
GATGTAAAAGAACCATCTGT+TGG 0.526719 4_3:-9155161 Msa0628470:CDS
TGTTCTGTTTGTAAGAGGGC+AGG 0.527252 4_3:-9149804 Msa0628470:intron
CATACTTAAGTTCACATGAA+AGG 0.528749 4_3:-9155910 Msa0628470:CDS
TCTGGCTCAGACAGAAAAGA+TGG 0.529278 4_3:-9154519 Msa0628470:CDS
CGCCCAGAAACCCAGTGGAA+TGG 0.529461 4_3:+9155210 None:intergenic
CCTTTACGTTTCCCTCCACA+CGG 0.530640 4_3:+9156839 None:intergenic
AAGGGTTCCTAGATCTTTGG+TGG 0.531076 4_3:+9155654 None:intergenic
AAGAGTAGATACTGTTGTGT+GGG 0.533292 4_3:-9150986 Msa0628470:CDS
AAACATTTGGTGGCAATGAA+GGG 0.534965 4_3:-9156306 Msa0628470:CDS
TTCTTCAATTGTCAGCAACT+AGG 0.535014 4_3:-9157467 Msa0628470:CDS
ATACACGACTCCAAACTGAT+AGG 0.536435 4_3:-9155886 Msa0628470:CDS
GATTGTTTCATCTCCGCCGA+TGG 0.537730 4_3:+9149405 None:intergenic
TGATACTTCAGAAAACAGTT+GGG 0.538878 4_3:+9156009 None:intergenic
ATGTAAAAGAACCATCTGTT+GGG 0.538984 4_3:-9155160 Msa0628470:CDS
AGAAGTTACTGGAACAAAGT+TGG 0.541258 4_3:-9155318 Msa0628470:CDS
GACCATCTCTGCGTGAGCTG+TGG 0.543454 4_3:+9154174 None:intergenic
GAGTAACTTGGAAGGATGAT+GGG 0.545083 4_3:+9149855 None:intergenic
TTTGCTCAGCCTCACAGAAA+GGG 0.550252 4_3:-9157302 Msa0628470:CDS
ACCTGATCTCCCAGAAGAAG+CGG 0.550448 4_3:+9155004 None:intergenic
GTTGGCTTGAATCTTGGAGT+TGG 0.551260 4_3:+9149134 None:intergenic
GTTTGCTCAGCCTCACAGAA+AGG 0.551794 4_3:-9157303 Msa0628470:CDS
AGGAATTTCTGACGAAATGT+GGG 0.551801 4_3:-9155183 Msa0628470:CDS
GTTGGTTCTACTTCTACCAC+CGG 0.552542 4_3:-9156352 Msa0628470:CDS
TGATACTAGGATGAAGAACA+TGG 0.554109 4_3:-9156131 Msa0628470:CDS
ACTGGGTTTCTGGGCGCCAA+AGG 0.556203 4_3:-9155203 Msa0628470:CDS
ACCACATCACTCGGTGGGGT+GGG 0.557277 4_3:-9157722 Msa0628470:five_prime_UTR
TTAAAATCGAAGACTCTGAA+AGG 0.559052 4_3:-9156159 Msa0628470:CDS
GAGAAAGTGTCTCAGAAGCA+AGG 0.561072 4_3:-9150023 Msa0628470:CDS
AGAAAGTGTCTCAGAAGCAA+GGG 0.563085 4_3:-9150022 Msa0628470:CDS
TGTTTCATCTCCGCCGATGG+AGG 0.563547 4_3:+9149408 None:intergenic
ATAGGATAACGGAAGAAAGA+AGG 0.566651 4_3:-9158182 Msa0628470:five_prime_UTR
CACCTCATATGCTGCTGGAG+AGG 0.567130 4_3:-9154742 Msa0628470:CDS
CTCATGTTGAACAAACTGCT+GGG 0.567874 4_3:-9155607 Msa0628470:CDS
TCTATTGGGACAGGTGTGAA+AGG 0.567926 4_3:-9157847 Msa0628470:intron
GTGGAGTTGCAACACCGTAA+AGG 0.568952 4_3:-9156070 Msa0628470:CDS
CAAATCCATTATCTATTAGA+GGG 0.569531 4_3:-9154647 Msa0628470:CDS
TTACGTTGGAGTTCACGTGC+TGG 0.569543 4_3:-9155032 Msa0628470:CDS
AACTGATGAATTGTTCATGA+AGG 0.571657 4_3:-9154397 Msa0628470:CDS
GTAATGTTCTGTTTGTAAGA+GGG 0.572939 4_3:-9149808 Msa0628470:exon
AAGGAACCACATCACTCGGT+GGG 0.573448 4_3:-9157727 Msa0628470:five_prime_UTR
TTCCAACATACTCTTCAAGA+AGG 0.574720 4_3:+9149331 None:intergenic
AAACAACTACTCCCTAGGAA+TGG 0.575002 4_3:-9149473 Msa0628470:three_prime_UTR
TGCTGACAATTGAAGAAGAG+TGG 0.575150 4_3:+9157473 None:intergenic
TTTGAGAATCTCCATTCCTA+GGG 0.575441 4_3:+9149462 None:intergenic
AAGGAACTCGAGAACAGTAC+AGG 0.576510 4_3:+9157421 None:intergenic
TCCCACCCCACCGAGTGATG+TGG 0.577779 4_3:+9157721 None:intergenic
TAAAACTAGTGTGAAGAACC+AGG 0.578257 4_3:-9155942 Msa0628470:CDS
GGTGCTGTTCTTGTGCAGCA+TGG 0.578459 4_3:-9154324 Msa0628470:CDS
ATGCGAACTCATGAAAAGGT+TGG 0.578996 4_3:-9149302 Msa0628470:three_prime_UTR
GCAAAGAGTTGACCAAAAGA+AGG 0.580268 4_3:-9156803 Msa0628470:CDS
AAGCTTCAAGGTAGATATCA+GGG 0.580862 4_3:+9155576 None:intergenic
CCAGTGAAGACTGAAATGTC+TGG 0.582287 4_3:-9154537 Msa0628470:CDS
ATCAGAAAGCATACCCCACA+TGG 0.582579 4_3:+9155064 None:intergenic
ACGAGTCCAGCCATTCCACT+GGG 0.584515 4_3:-9155220 Msa0628470:CDS
CTTGTCTTCTAAATGGGTTG+AGG 0.585359 4_3:-9157500 Msa0628470:CDS
CCGTGTGGAGGGAAACGTAA+AGG 0.586268 4_3:-9156839 Msa0628470:CDS
TACTTGAATCATACATTCAG+CGG 0.586566 4_3:+9158091 None:intergenic
TTCTACTTCTACCACCGGAA+CGG 0.587113 4_3:-9156347 Msa0628470:CDS
TTCAATTGTCAGCAACTAGG+AGG 0.587865 4_3:-9157464 Msa0628470:CDS
TTATCAGAAGTCATGGCTTG+TGG 0.589431 4_3:+9154900 None:intergenic
ATTCATCAGAAGCAAATGAA+GGG 0.592633 4_3:+9157262 None:intergenic
TATGGTACGAAAGATTTGAC+AGG 0.592753 4_3:-9157599 Msa0628470:CDS
GTTCTTCATCCTAGTATCAG+AGG 0.593005 4_3:+9156135 None:intergenic
TGTGATCCTGAAAACATAGC+AGG 0.595241 4_3:+9155509 None:intergenic
AGCAACCGGAAGTTTGAGAT+CGG 0.600071 4_3:-9158116 Msa0628470:five_prime_UTR
CTGATTATCCTCAACATCAG+AGG 0.600356 4_3:+9155295 None:intergenic
TCTCAAAGCATATGCAAGCA+TGG 0.600621 4_3:-9149446 Msa0628470:three_prime_UTR
GATATTTGGGAGGTCCCTGT+TGG 0.601167 4_3:-9154345 Msa0628470:CDS
AAAGAACCATCTGTTGGGCA+TGG 0.602087 4_3:-9155155 Msa0628470:CDS
GGATGAAGCAAACCGTGTGG+AGG 0.603733 4_3:-9156851 Msa0628470:CDS
GCATTCTGGGCAGGAGCGTG+AGG 0.605511 4_3:-9154943 Msa0628470:CDS
ATCTTATTGAGTAACTTGGA+AGG 0.606946 4_3:+9149847 None:intergenic
GATAGACCATGCCCAACAGA+TGG 0.607055 4_3:+9155149 None:intergenic
TCTTTCTCTCCCTTTCTGTG+AGG 0.607239 4_3:+9157293 None:intergenic
TACTCATTATACCCAAAGTG+AGG 0.608815 4_3:-9154865 Msa0628470:CDS
GATGAAGCAAACCGTGTGGA+GGG 0.609368 4_3:-9156850 Msa0628470:CDS
CCAAATCGCAATCCCGGCGA+CGG 0.611656 4_3:-9158211 Msa0628470:five_prime_UTR
GTAGCATACTCCACCTCCAT+CGG 0.614364 4_3:-9149421 Msa0628470:three_prime_UTR
GACGGTAGCTGATAGGATAA+CGG 0.617586 4_3:-9158193 Msa0628470:five_prime_UTR
TGAAACAACGGAAGTTTCAG+CGG 0.619213 4_3:-9154491 Msa0628470:CDS
ACTAAAATATTGAAGGACAA+AGG 0.619506 4_3:-9154828 Msa0628470:CDS
CACGACTCCAAACTGATAGG+AGG 0.620059 4_3:-9155883 Msa0628470:CDS
CAGAGTGCTCAACATAGCAA+AGG 0.621328 4_3:-9155854 Msa0628470:CDS
AGTTTCCTGAAAGGTTCCCT+CGG 0.622484 4_3:+9156696 None:intergenic
AAGAACAGGAAGGTCCATGT+GGG 0.623543 4_3:-9155078 Msa0628470:CDS
TTCTCTTCTCAAGTCTATGG+AGG 0.624064 4_3:+9157047 None:intergenic
GCACCAGCGCACATTGCACA+GGG 0.624348 4_3:+9151021 None:intergenic
CATGTCAGCACTTTACCGGA+AGG 0.626883 4_3:-9155824 Msa0628470:CDS
AGGGACCTCCCAAATATCAC+CGG 0.626986 4_3:+9154350 None:intergenic
TCTCCAAATAAATTGGAGAG+TGG 0.628288 4_3:-9154780 Msa0628470:CDS
AGACACTTTCTCCTCCATCA+GGG 0.628657 4_3:+9150034 None:intergenic
AACTATTTAGCCAAATAACG+AGG 0.631106 4_3:-9149114 Msa0628470:three_prime_UTR
CAAGAGTAGATACTGTTGTG+TGG 0.631236 4_3:-9150987 Msa0628470:CDS
ACTCATTATACCCAAAGTGA+GGG 0.631789 4_3:-9154864 Msa0628470:CDS
AAAGTTGGCCTCTGATGTTG+AGG 0.632830 4_3:-9155303 Msa0628470:CDS
GGCTCGGTGAGATCTGGTAA+TGG 0.633581 4_3:+9149167 None:intergenic
ATGAACAGTTCAAGGCAACA+AGG 0.634261 4_3:-9155272 Msa0628470:CDS
TCACAGTGTTTGTCATGCCG+TGG 0.634272 4_3:-9157570 Msa0628470:CDS
TGTGTCTTCGTCCAACAGAA+CGG 0.635332 4_3:-9157172 Msa0628470:CDS
ATTGAAGGAACCACATCACT+CGG 0.635388 4_3:-9157731 Msa0628470:five_prime_UTR
CTTTACGGGTACTCTATAGG+TGG 0.640527 4_3:+9157524 None:intergenic
ACAAATCTGACAGTGAGACA+TGG 0.643964 4_3:-9154965 Msa0628470:CDS
GCAGAAATCGTAAATATCGG+TGG 0.645257 4_3:-9154612 Msa0628470:CDS
AACGGGTGAACTGGTGCAGG+AGG 0.645875 4_3:+9149994 None:intergenic
GCATACTCCACCTCCATCGG+CGG 0.654108 4_3:-9149418 Msa0628470:three_prime_UTR
AAGATGGAGAGTTGAAACAA+CGG 0.659793 4_3:-9154503 Msa0628470:CDS
ACTTCTGATAAATCAAAACC+AGG 0.666314 4_3:-9154888 Msa0628470:CDS
GAAGGAACCACATCACTCGG+TGG 0.667900 4_3:-9157728 Msa0628470:five_prime_UTR
GATACTAGGATGAAGAACAT+GGG 0.668142 4_3:-9156130 Msa0628470:CDS
TTCTAATTCTACCACAACAG+AGG 0.668388 4_3:-9156221 Msa0628470:CDS
ACAGGAGCAAGTCCATAGTG+AGG 0.668448 4_3:-9156593 Msa0628470:CDS
CACAACAGTCACAACAACCA+CGG 0.671304 4_3:+9157553 None:intergenic
TTTCAAACTTTCCGTTCCGG+TGG 0.671326 4_3:+9156336 None:intergenic
GCATGACAAACACTGTGACA+AGG 0.672365 4_3:+9157575 None:intergenic
AAAGAACAGGAAGGTCCATG+TGG 0.672842 4_3:-9155079 Msa0628470:CDS
TTGTTGATGAGTTTGTGGAG+AGG 0.673580 4_3:-9155382 Msa0628470:CDS
AGAGTAGATACTGTTGTGTG+GGG 0.676419 4_3:-9150985 Msa0628470:CDS
GCACAAGAACAGCACCAACA+GGG 0.676445 4_3:+9154331 None:intergenic
ACTATTTAGCCAAATAACGA+GGG 0.678433 4_3:-9149113 Msa0628470:three_prime_UTR
TTACTAACATGTAGCAACGA+GGG 0.678875 4_3:-9149269 Msa0628470:three_prime_UTR
AAAGGCCGGTGATATTTGGG+AGG 0.695017 4_3:-9154355 Msa0628470:CDS
TTTGGCGCCCAGAAACCCAG+TGG 0.697614 4_3:+9155205 None:intergenic
AGAACAGGAAGGTCCATGTG+GGG 0.701387 4_3:-9155077 Msa0628470:CDS
TTTACTAACATGTAGCAACG+AGG 0.709631 4_3:-9149270 Msa0628470:three_prime_UTR
GGAGGATGAAGCAAACCGTG+TGG 0.710302 4_3:-9156854 Msa0628470:CDS
TTTGGATAAGAAAACAAACA+AGG 0.711367 4_3:-9156545 Msa0628470:CDS
AGGAACCACATCACTCGGTG+GGG 0.728888 4_3:-9157726 Msa0628470:five_prime_UTR
CAATTGTTAAAAGAACAGGA+AGG 0.791653 4_3:-9155088 Msa0628470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATAAACATAAAAAATTTAT+TGG - chr4_3:9150983-9151002 Msa0628470:CDS 10.0%
!!! AAAATTTCCTATATAATTTT+GGG + chr4_3:9151050-9151069 None:intergenic 10.0%
!!! TAAAATTTCCTATATAATTT+TGG + chr4_3:9151051-9151070 None:intergenic 10.0%
!!! ACATTTTTAAAAAAAATTGT+GGG - chr4_3:9156721-9156740 Msa0628470:CDS 10.0%
!! ATTACTATTTAAATCTAAAA+AGG - chr4_3:9158229-9158248 Msa0628470:five_prime_UTR 10.0%
!! AAAACAAAAACAAAGAAAAA+GGG - chr4_3:9150134-9150153 Msa0628470:intron 15.0%
!! AATTAAAAAATTCACATAAC+TGG + chr4_3:9152991-9153010 None:intergenic 15.0%
!! ATCAAATGAATATTAAACTT+TGG + chr4_3:9153169-9153188 None:intergenic 15.0%
!! ACTATAATTAGTAAGTAAAT+GGG + chr4_3:9153217-9153236 None:intergenic 15.0%
!! TACTATAATTAGTAAGTAAA+TGG + chr4_3:9153218-9153237 None:intergenic 15.0%
!! AATAATGTATTAGGAAAAAT+GGG + chr4_3:9153851-9153870 None:intergenic 15.0%
!! TAATAATGTATTAGGAAAAA+TGG + chr4_3:9153852-9153871 None:intergenic 15.0%
!! TTTCCTAATACATTATTATT+AGG - chr4_3:9153854-9153873 Msa0628470:intron 15.0%
!! TGAAAAATTAAAACTTCATT+TGG - chr4_3:9154683-9154702 Msa0628470:CDS 15.0%
!! GAAAAATTAAAACTTCATTT+GGG - chr4_3:9154684-9154703 Msa0628470:CDS 15.0%
!! CAATCAATAGATAAAAATTA+GGG + chr4_3:9155172-9155191 None:intergenic 15.0%
!! TTTAGAAAGAAAACAAAATA+CGG - chr4_3:9155253-9155272 Msa0628470:CDS 15.0%
!!! GACAAATTTCATATATTTTA+AGG + chr4_3:9155503-9155522 None:intergenic 15.0%
!! TCTGCAAATAAATAATATTA+GGG + chr4_3:9155750-9155769 None:intergenic 15.0%
!! ATAGAAAAATGATTAGTATT+TGG + chr4_3:9156595-9156614 None:intergenic 15.0%
!!! CACATTTTTAAAAAAAATTG+TGG - chr4_3:9156720-9156739 Msa0628470:CDS 15.0%
!!! ATTATATAATTTTGACAATG+AGG + chr4_3:9157040-9157059 None:intergenic 15.0%
!! TAACCAAACAAAAAAAAAAT+TGG + chr4_3:9157709-9157728 None:intergenic 15.0%
!!! ATTTAGTTCTGATTTTCTAT+TGG - chr4_3:9149365-9149384 Msa0628470:three_prime_UTR 20.0%
!!! TTTAGTTCTGATTTTCTATT+GGG - chr4_3:9149366-9149385 Msa0628470:three_prime_UTR 20.0%
!!! TATTTTTCTTCAACCATATA+TGG - chr4_3:9149555-9149574 Msa0628470:intron 20.0%
!! CAAATTATTTATCTTCTTCT+TGG + chr4_3:9150084-9150103 None:intergenic 20.0%
!! GAAAACAAAAACAAAGAAAA+AGG - chr4_3:9150133-9150152 Msa0628470:intron 20.0%
!! AATAAAGAAAGAATTGTACT+TGG - chr4_3:9150461-9150480 Msa0628470:intron 20.0%
!! TTGAAATCAAAGAAAACATT+TGG - chr4_3:9150908-9150927 Msa0628470:intron 20.0%
!! GAAGGATAACTAAATAAAAA+TGG - chr4_3:9153346-9153365 Msa0628470:intron 20.0%
!! TCACCTAATAATAATGTATT+AGG + chr4_3:9153860-9153879 None:intergenic 20.0%
!! ATTATTAGGTGAAATTATTG+TGG - chr4_3:9153868-9153887 Msa0628470:intron 20.0%
!! TTATTAGGTGAAATTATTGT+GGG - chr4_3:9153869-9153888 Msa0628470:intron 20.0%
!! AAATATCACAGAAATTGAAT+GGG - chr4_3:9154103-9154122 Msa0628470:intron 20.0%
!!! TGAACAATGATTAGTTAAAT+TGG + chr4_3:9154781-9154800 None:intergenic 20.0%
!! CCAATCAATAGATAAAAATT+AGG + chr4_3:9155173-9155192 None:intergenic 20.0%
!!! CCTAATTTTTATCTATTGAT+TGG - chr4_3:9155170-9155189 Msa0628470:CDS 20.0%
!!! TAATTTTTTTTCCTTCTCTT+TGG + chr4_3:9155399-9155418 None:intergenic 20.0%
!! CTCTGCAAATAAATAATATT+AGG + chr4_3:9155751-9155770 None:intergenic 20.0%
!! CAAAACAAAAATCACATATT+TGG - chr4_3:9155979-9155998 Msa0628470:CDS 20.0%
!! AAATGATACATCTTGATAAA+TGG - chr4_3:9156073-9156092 Msa0628470:CDS 20.0%
!! ACTTTGATAAATTAGTATGA+TGG - chr4_3:9156126-9156145 Msa0628470:CDS 20.0%
!! GTTCATAATTATATATGCAA+TGG - chr4_3:9156340-9156359 Msa0628470:CDS 20.0%
!! GTTCATAATTATATATGCAA+TGG - chr4_3:9156340-9156359 Msa0628470:CDS 20.0%
!!! TTTTTAAAAAAAATTGTGGG+AGG - chr4_3:9156724-9156743 Msa0628470:CDS 20.0%
!!! TTTTAAAAAAAATTGTGGGA+GGG - chr4_3:9156725-9156744 Msa0628470:CDS 20.0%
!! AGGGGAAATTATTATAAAAT+TGG - chr4_3:9156744-9156763 Msa0628470:CDS 20.0%
!!! ATATTCAACTACTGTATTTT+GGG - chr4_3:9156829-9156848 Msa0628470:CDS 20.0%
!! TCTCTTTGATCAATAAAAAT+GGG + chr4_3:9156950-9156969 None:intergenic 20.0%
!! ATCTCTTTGATCAATAAAAA+TGG + chr4_3:9156951-9156970 None:intergenic 20.0%
!!! TTCTTATTTTTATTTTCGGA+TGG + chr4_3:9157259-9157278 None:intergenic 20.0%
!!! CCTCTTCTTATTTTTATTTT+CGG + chr4_3:9157263-9157282 None:intergenic 20.0%
!!! AAGCCAATTTTTTTTTTGTT+TGG - chr4_3:9157703-9157722 Msa0628470:exon 20.0%
! ATTGCAAACATTTCTTTCAT+TGG + chr4_3:9149871-9149890 None:intergenic 25.0%
! CAAAATAAATGACACTGAAA+AGG - chr4_3:9150205-9150224 Msa0628470:intron 25.0%
! TTTGGATAAGAAAACAAACA+AGG - chr4_3:9150682-9150701 Msa0628470:intron 25.0%
! ATTGAGACAACTTTATTATC+AGG - chr4_3:9150773-9150792 Msa0628470:intron 25.0%
! AAATCAAAGAAAACATTTGG+TGG - chr4_3:9150911-9150930 Msa0628470:intron 25.0%
! TTAAGTATGATATTTCTTCC+TGG + chr4_3:9151306-9151325 None:intergenic 25.0%
! ATACTTAAGTTCACATGAAA+GGG - chr4_3:9151318-9151337 Msa0628470:intron 25.0%
! ACTTATGCCAAAAAGTAAAT+CGG - chr4_3:9151483-9151502 Msa0628470:intron 25.0%
! AAAAATCCTTTCTTCAGTTT+GGG + chr4_3:9151539-9151558 None:intergenic 25.0%
! TGACTTATCACTTTCATATT+GGG + chr4_3:9151746-9151765 None:intergenic 25.0%
! ATGACTTATCACTTTCATAT+TGG + chr4_3:9151747-9151766 None:intergenic 25.0%
! AAACCAATTGTTAAAAGAAC+AGG - chr4_3:9152135-9152154 Msa0628470:intron 25.0%
!!! TTTTGATTTATCAGAAGTCA+TGG + chr4_3:9152337-9152356 None:intergenic 25.0%
! ACTAAAATATTGAAGGACAA+AGG - chr4_3:9152399-9152418 Msa0628470:intron 25.0%
! AAAGGAAAACATATTGAAGT+TGG - chr4_3:9152417-9152436 Msa0628470:intron 25.0%
! ATCATCTTCTCCAAATAAAT+TGG - chr4_3:9152440-9152459 Msa0628470:intron 25.0%
!!! TACTTCTGGCTTAAAAAAAA+TGG - chr4_3:9152551-9152570 Msa0628470:intron 25.0%
! CAAATCCATTATCTATTAGA+GGG - chr4_3:9152580-9152599 Msa0628470:intron 25.0%
! ATACACTTTGAATTTAAACC+AGG + chr4_3:9153133-9153152 None:intergenic 25.0%
!! TGTCAATAACACAAAAGTTT+TGG + chr4_3:9153243-9153262 None:intergenic 25.0%
!! ACTAAATAAAAATGGCTCTA+AGG - chr4_3:9153354-9153373 Msa0628470:intron 25.0%
! AAAAACTGCAAATCTAAGTT+TGG + chr4_3:9153448-9153467 None:intergenic 25.0%
! AATGGTTTCTTAATCATAGT+TGG - chr4_3:9153661-9153680 Msa0628470:intron 25.0%
! ATGGTTTCTTAATCATAGTT+GGG - chr4_3:9153662-9153681 Msa0628470:intron 25.0%
! GAAATATCACAGAAATTGAA+TGG - chr4_3:9154102-9154121 Msa0628470:intron 25.0%
!! TATTGATTGCAATCAATGAA+AGG - chr4_3:9154138-9154157 Msa0628470:CDS 25.0%
! ATTGATTGCAATCAATGAAA+GGG - chr4_3:9154139-9154158 Msa0628470:CDS 25.0%
! TTTCAAATTATGAAAAGGTC+GGG + chr4_3:9154545-9154564 None:intergenic 25.0%
! CTTTCAAATTATGAAAAGGT+CGG + chr4_3:9154546-9154565 None:intergenic 25.0%
! AAGGCTTTCAAATTATGAAA+AGG + chr4_3:9154550-9154569 None:intergenic 25.0%
! AAAGCCTTAAAGATTATCTT+TGG - chr4_3:9154562-9154581 Msa0628470:CDS 25.0%
! AAAGCCAAAGATAATCTTTA+AGG + chr4_3:9154569-9154588 None:intergenic 25.0%
! TATACAATATACACTTTCTC+CGG + chr4_3:9154605-9154624 None:intergenic 25.0%
! TAAAATACAGGATTGAAATC+TGG + chr4_3:9154649-9154668 None:intergenic 25.0%
! AGATCTTTCATGTAAAATAC+AGG + chr4_3:9154661-9154680 None:intergenic 25.0%
!! TAAATTGGTGATAATGAAGA+AGG + chr4_3:9154766-9154785 None:intergenic 25.0%
! ATTTGCAATGTGTTGAAATT+TGG - chr4_3:9154892-9154911 Msa0628470:CDS 25.0%
! TTTGCAATGTGTTGAAATTT+GGG - chr4_3:9154893-9154912 Msa0628470:CDS 25.0%
! CTTGAAAAGAGTTTATAAAG+AGG + chr4_3:9154965-9154984 None:intergenic 25.0%
! TCAATAGATAAAAATTAGGG+AGG + chr4_3:9155169-9155188 None:intergenic 25.0%
! ATGTTAAAAAAACCATTTGC+CGG - chr4_3:9155195-9155214 Msa0628470:CDS 25.0%
! AAAAATAAAAATACCACGTC+CGG + chr4_3:9155217-9155236 None:intergenic 25.0%
! TCAACTTAGTCTCTAATAAA+CGG + chr4_3:9155553-9155572 None:intergenic 25.0%
! GAATTGCTTTATGATTCATT+AGG - chr4_3:9155824-9155843 Msa0628470:CDS 25.0%
! TACTTCATAGACTAAATTGT+AGG - chr4_3:9155895-9155914 Msa0628470:CDS 25.0%
! TGTGATAGAAAAGCAATATT+TGG - chr4_3:9156022-9156041 Msa0628470:CDS 25.0%
!! AATATTTGGTAGTAGTGAAT+TGG - chr4_3:9156036-9156055 Msa0628470:CDS 25.0%
! TGGTTAATGTATATTAGTTC+TGG - chr4_3:9156093-9156112 Msa0628470:CDS 25.0%
! AATTAGTATGATGGCTTATT+TGG - chr4_3:9156135-9156154 Msa0628470:CDS 25.0%
! TAATTATATATGCAATGGCA+CGG - chr4_3:9156345-9156364 Msa0628470:CDS 25.0%
! TAATTATATATGCAATGGCA+CGG - chr4_3:9156345-9156364 Msa0628470:CDS 25.0%
! GTATTTGGTAAAATGAATGT+AGG + chr4_3:9156580-9156599 None:intergenic 25.0%
! TATAATAAGAAAAGGACTTG+AGG - chr4_3:9156696-9156715 Msa0628470:CDS 25.0%
! TTTAAAAAAAATTGTGGGAG+GGG - chr4_3:9156726-9156745 Msa0628470:CDS 25.0%
!! CATATTCAACTACTGTATTT+TGG - chr4_3:9156828-9156847 Msa0628470:CDS 25.0%
!!! TTTTTTAAATGACCATACTG+TGG + chr4_3:9156917-9156936 None:intergenic 25.0%
! ATTAATACGCACATTAAACA+TGG - chr4_3:9156974-9156993 Msa0628470:CDS 25.0%
! TTCTCAAAAATTGAATTAGC+AGG + chr4_3:9157076-9157095 None:intergenic 25.0%
!!! ATTTTTATTTTCGGATGGAA+CGG + chr4_3:9157254-9157273 None:intergenic 25.0%
! CCGAAAATAAAAATAAGAAG+AGG - chr4_3:9157260-9157279 Msa0628470:CDS 25.0%
!! AAAAATAAGAAGAGGAGTAT+TGG - chr4_3:9157268-9157287 Msa0628470:CDS 25.0%
! TTGTATCTTATTGAGTAACT+TGG + chr4_3:9157387-9157406 None:intergenic 25.0%
! CATGATCTACAATTACATAT+AGG - chr4_3:9157616-9157635 Msa0628470:CDS 25.0%
! CTACATGTTAGTAAATGAAA+TGG + chr4_3:9157952-9157971 None:intergenic 25.0%
! AGAATTATTGGCATGTTATT+CGG + chr4_3:9157987-9158006 None:intergenic 25.0%
! TAAACTTCATGCAGAATTAT+TGG + chr4_3:9157999-9158018 None:intergenic 25.0%
GGAAGAAAAGGAATTGAAAT+TGG - chr4_3:9149081-9149100 Msa0628470:three_prime_UTR 30.0%
TACTTGAATCATACATTCAG+CGG + chr4_3:9149139-9149158 None:intergenic 30.0%
! TTTCGTTCATGTTGTTATTC+TGG - chr4_3:9149433-9149452 Msa0628470:three_prime_UTR 30.0%
AGTAGCCATTGAAAGATAAA+GGG + chr4_3:9149602-9149621 None:intergenic 30.0%
ATTTAGAAGACAAGGCTTTA+CGG + chr4_3:9149721-9149740 None:intergenic 30.0%
! TAAAGCCTTGTCTTCTAAAT+GGG - chr4_3:9149721-9149740 Msa0628470:intron 30.0%
AAGTAGAAGAAGCAGAATAA+AGG - chr4_3:9149893-9149912 Msa0628470:CDS 30.0%
ATTCATCAGAAGCAAATGAA+GGG + chr4_3:9149968-9149987 None:intergenic 30.0%
! ACAGTTTTCACCTTTTGTAA+AGG + chr4_3:9150234-9150253 None:intergenic 30.0%
AACCAATATATGCATCGAAA+AGG - chr4_3:9150569-9150588 Msa0628470:intron 30.0%
! ATCCTTTTCGATGCATATAT+TGG + chr4_3:9150574-9150593 None:intergenic 30.0%
ATGAATTATCTTCCTCACTA+TGG + chr4_3:9150649-9150668 None:intergenic 30.0%
TTCATCTTTCGTAGAACATT+TGG - chr4_3:9150664-9150683 Msa0628470:intron 30.0%
TTATCAGGAAAAAGATTCAG+TGG - chr4_3:9150788-9150807 Msa0628470:intron 30.0%
! TAGATGAGTTGGATATTTCA+AGG + chr4_3:9150826-9150845 None:intergenic 30.0%
!! ACTTGTTTTCTTAGATGAGT+TGG + chr4_3:9150837-9150856 None:intergenic 30.0%
GACAAACATGAAAAGTTTGT+TGG - chr4_3:9150857-9150876 Msa0628470:intron 30.0%
AGAAGCTCCCAAAATTATAT+AGG - chr4_3:9151040-9151059 Msa0628470:CDS 30.0%
TTAAAATCGAAGACTCTGAA+AGG - chr4_3:9151068-9151087 Msa0628470:intron 30.0%
TGATACTTCAGAAAACAGTT+GGG + chr4_3:9151221-9151240 None:intergenic 30.0%
!!! TTCACACTAGTTTTAGACAT+CGG + chr4_3:9151280-9151299 None:intergenic 30.0%
CATACTTAAGTTCACATGAA+AGG - chr4_3:9151317-9151336 Msa0628470:intron 30.0%
CAAAAATCCTTTCTTCAGTT+TGG + chr4_3:9151540-9151559 None:intergenic 30.0%
ATAATCAGATGAACAGTTCA+AGG - chr4_3:9151947-9151966 Msa0628470:intron 30.0%
ATGTAAAAGAACCATCTGTT+GGG - chr4_3:9152067-9152086 Msa0628470:intron 30.0%
! CTTCCTGTTCTTTTAACAAT+TGG + chr4_3:9152141-9152160 None:intergenic 30.0%
CAATTGTTAAAAGAACAGGA+AGG - chr4_3:9152139-9152158 Msa0628470:intron 30.0%
CTGATATTGTTCAATTACGT+TGG - chr4_3:9152181-9152200 Msa0628470:intron 30.0%
ACTTCTGATAAATCAAAACC+AGG - chr4_3:9152339-9152358 Msa0628470:intron 30.0%
GTCTGACACTAAAATATTGA+AGG - chr4_3:9152392-9152411 Msa0628470:intron 30.0%
!! CCTCTAATAGATAATGGATT+TGG + chr4_3:9152582-9152601 None:intergenic 30.0%
CCAAATCCATTATCTATTAG+AGG - chr4_3:9152579-9152598 Msa0628470:intron 30.0%
AACTGATGAATTGTTCATGA+AGG - chr4_3:9152830-9152849 Msa0628470:intron 30.0%
CATGGAAAAATTATTGCAAG+AGG - chr4_3:9152921-9152940 Msa0628470:intron 30.0%
! AGTTGGAGCATTTGTAATAT+TGG - chr4_3:9153511-9153530 Msa0628470:intron 30.0%
AGCATTTGTAATATTGGCAA+TGG - chr4_3:9153517-9153536 Msa0628470:intron 30.0%
! GCATTTTTCATAAAACTGCA+TGG + chr4_3:9153595-9153614 None:intergenic 30.0%
!! TGCAGTTTTATGAAAAATGC+TGG - chr4_3:9153595-9153614 Msa0628470:intron 30.0%
TTCATGCTTATCACATGTAT+CGG + chr4_3:9153643-9153662 None:intergenic 30.0%
ATACATGTGATAAGCATGAA+TGG - chr4_3:9153643-9153662 Msa0628470:intron 30.0%
ACTTTGATCGAATAGGTAAA+TGG + chr4_3:9153824-9153843 None:intergenic 30.0%
TTGATTGCAATCAATGAAAG+GGG - chr4_3:9154140-9154159 Msa0628470:CDS 30.0%
ACGTTTATTGTTAGTGACAT+AGG + chr4_3:9154220-9154239 None:intergenic 30.0%
AGAAGAATAAGTTAGTGACA+TGG + chr4_3:9154323-9154342 None:intergenic 30.0%
! CTATATTGCAGTGTTATTGA+TGG + chr4_3:9154502-9154521 None:intergenic 30.0%
!!! GGCTTTTATTTTACACATAC+CGG - chr4_3:9154583-9154602 Msa0628470:CDS 30.0%
AAACTTCATTTGGGAAAGTT+TGG - chr4_3:9154693-9154712 Msa0628470:CDS 30.0%
AACTTCATTTGGGAAAGTTT+GGG - chr4_3:9154694-9154713 Msa0628470:CDS 30.0%
ACAGTTTACTTAACAATAGC+CGG - chr4_3:9154800-9154819 Msa0628470:CDS 30.0%
!!! TGGAGTTTGTTTTTGAATCT+AGG + chr4_3:9154855-9154874 None:intergenic 30.0%
AATATGCAAATGCATGCAAA+TGG + chr4_3:9154875-9154894 None:intergenic 30.0%
TTGCAATGTGTTGAAATTTG+GGG - chr4_3:9154894-9154913 Msa0628470:CDS 30.0%
GAAAAGAGTTTATAAAGAGG+AGG + chr4_3:9154962-9154981 None:intergenic 30.0%
AAGAAAACAAAATACGGAGA+TGG - chr4_3:9155259-9155278 Msa0628470:CDS 30.0%
TACTTCAAGGAGTAAATTGA+GGG + chr4_3:9155431-9155450 None:intergenic 30.0%
ATACTTCAAGGAGTAAATTG+AGG + chr4_3:9155432-9155451 None:intergenic 30.0%
CAACTTAGTCTCTAATAAAC+GGG + chr4_3:9155552-9155571 None:intergenic 30.0%
TTGAGTATTCAGAGTATGTT+AGG - chr4_3:9155780-9155799 Msa0628470:CDS 30.0%
TATTCAGAGTATGTTAGGAA+AGG - chr4_3:9155785-9155804 Msa0628470:CDS 30.0%
ATTCAGAGTATGTTAGGAAA+GGG - chr4_3:9155786-9155805 Msa0628470:CDS 30.0%
CACTACTCATAGGAAAATAA+AGG + chr4_3:9156443-9156462 None:intergenic 30.0%
! CTCTTATTCAAGTGTTTTCA+AGG + chr4_3:9156644-9156663 None:intergenic 30.0%
CTTGAAAACACTTGAATAAG+AGG - chr4_3:9156642-9156661 Msa0628470:CDS 30.0%
ATTGTGTGTTTAAGCTTACT+CGG + chr4_3:9156787-9156806 None:intergenic 30.0%
AGTAATATTCAACCACAGTA+TGG - chr4_3:9156902-9156921 Msa0628470:CDS 30.0%
TTATTTCCAAGACAAGACTA+AGG + chr4_3:9157119-9157138 None:intergenic 30.0%
!!! TTTTTATTTTCGGATGGAAC+GGG + chr4_3:9157253-9157272 None:intergenic 30.0%
!!! AGCAATTTTTTCAACTGAGA+AGG - chr4_3:9157315-9157334 Msa0628470:CDS 30.0%
ATCTTATTGAGTAACTTGGA+AGG + chr4_3:9157383-9157402 None:intergenic 30.0%
TGTAATGTTCTGTTTGTAAG+AGG - chr4_3:9157418-9157437 Msa0628470:CDS 30.0%
GTAATGTTCTGTTTGTAAGA+GGG - chr4_3:9157419-9157438 Msa0628470:CDS 30.0%
TTTGAAAATGACTCAACATG+AGG + chr4_3:9157464-9157483 None:intergenic 30.0%
CTTGAAATGAAAGTTGCAAT+TGG + chr4_3:9157566-9157585 None:intergenic 30.0%
! ACCAAGTATTTTCTTGATGA+TGG + chr4_3:9157642-9157661 None:intergenic 30.0%
TGAATGAGAGAAGGAATAAA+AGG + chr4_3:9157684-9157703 None:intergenic 30.0%
!!! TGATTGATAACTGGTTTTCA+TGG + chr4_3:9158040-9158059 None:intergenic 30.0%
!! TAAATAGTTGGCTTGAATCT+TGG + chr4_3:9158102-9158121 None:intergenic 30.0%
TCGTTATTTGGCTAAATAGT+TGG + chr4_3:9158114-9158133 None:intergenic 30.0%
AACTATTTAGCCAAATAACG+AGG - chr4_3:9158113-9158132 Msa0628470:five_prime_UTR 30.0%
ACTATTTAGCCAAATAACGA+GGG - chr4_3:9158114-9158133 Msa0628470:five_prime_UTR 30.0%
!! ATAGGATAACGGAAGAAAGA+AGG - chr4_3:9149045-9149064 Msa0628470:three_prime_UTR 35.0%
!! ACAAGAGCTTTAGGAAGAAA+AGG - chr4_3:9149069-9149088 Msa0628470:three_prime_UTR 35.0%
! TTCTGATTTTCTATTGGGAC+AGG - chr4_3:9149371-9149390 Msa0628470:three_prime_UTR 35.0%
TGCATCAGATAACACTGTTT+GGG - chr4_3:9149456-9149475 Msa0628470:three_prime_UTR 35.0%
TCGTTCCCTTTATCTTTCAA+TGG - chr4_3:9149594-9149613 Msa0628470:intron 35.0%
GAGTAGCCATTGAAAGATAA+AGG + chr4_3:9149603-9149622 None:intergenic 35.0%
TCAATGGCTACTCAAATCTA+TGG - chr4_3:9149610-9149629 Msa0628470:intron 35.0%
TATGGTACGAAAGATTTGAC+AGG - chr4_3:9149628-9149647 Msa0628470:intron 35.0%
TTTAGAAGACAAGGCTTTAC+GGG + chr4_3:9149720-9149739 None:intergenic 35.0%
! GTAAAGCCTTGTCTTCTAAA+TGG - chr4_3:9149720-9149739 Msa0628470:intron 35.0%
TTCTTCAATTGTCAGCAACT+AGG - chr4_3:9149760-9149779 Msa0628470:intron 35.0%
!! ACTAGGAGGTTTATTTTCAG+AGG - chr4_3:9149777-9149796 Msa0628470:intron 35.0%
GATTCATCAGAAGCAAATGA+AGG + chr4_3:9149969-9149988 None:intergenic 35.0%
GAAAAGGAAGCCTTTACAAA+AGG - chr4_3:9150221-9150240 Msa0628470:intron 35.0%
! ATGGAAGTGCAGCATAATAT+GGG - chr4_3:9150323-9150342 Msa0628470:intron 35.0%
! GGTTTGGAAGAATTTTCACT+GGG - chr4_3:9150344-9150363 Msa0628470:intron 35.0%
! AGAATTTTCACTGGGATATG+AGG - chr4_3:9150352-9150371 Msa0628470:intron 35.0%
ACGTAAAGGAAGAATTCAAC+AGG - chr4_3:9150402-9150421 Msa0628470:intron 35.0%
!! TACTTGGTGCAGATATTGAT+TGG - chr4_3:9150477-9150496 Msa0628470:intron 35.0%
!! CATATATTGGTTCTCTCTTG+TGG + chr4_3:9150561-9150580 None:intergenic 35.0%
ACAATGCATGAATCTGGTTA+TGG - chr4_3:9150596-9150615 Msa0628470:intron 35.0%
TGGAAAAGCTTCTATTTCAC+AGG - chr4_3:9150616-9150635 Msa0628470:intron 35.0%
AACAAGGCATACATTCAAAC+AGG - chr4_3:9150698-9150717 Msa0628470:intron 35.0%
TGATTTCAAACTTTCCGTTC+CGG + chr4_3:9150897-9150916 None:intergenic 35.0%
! AAAACATTTGGTGGCAATGA+AGG - chr4_3:9150920-9150939 Msa0628470:intron 35.0%
! AAACATTTGGTGGCAATGAA+GGG - chr4_3:9150921-9150940 Msa0628470:intron 35.0%
TTCTAATTCTACCACAACAG+AGG - chr4_3:9151006-9151025 Msa0628470:CDS 35.0%
TGATACTAGGATGAAGAACA+TGG - chr4_3:9151096-9151115 Msa0628470:intron 35.0%
GATACTAGGATGAAGAACAT+GGG - chr4_3:9151097-9151116 Msa0628470:intron 35.0%
CATGGGAGAGAAAAAGAATT+CGG - chr4_3:9151114-9151133 Msa0628470:intron 35.0%
TCTGTCTTTATCATGTGCAA+TGG + chr4_3:9151191-9151210 None:intergenic 35.0%
GTGATACTTCAGAAAACAGT+TGG + chr4_3:9151222-9151241 None:intergenic 35.0%
! TCTGAAGTATCACAAGTTCA+TGG - chr4_3:9151229-9151248 Msa0628470:intron 35.0%
! CTGAAGTATCACAAGTTCAT+GGG - chr4_3:9151230-9151249 Msa0628470:intron 35.0%
!!! TCACACTAGTTTTAGACATC+GGG + chr4_3:9151279-9151298 None:intergenic 35.0%
TAAAACTAGTGTGAAGAACC+AGG - chr4_3:9151285-9151304 Msa0628470:intron 35.0%
AAGCTTCAAGGTAGATATCA+GGG + chr4_3:9151654-9151673 None:intergenic 35.0%
! TCTGGAGTCATGAAAATAGA+AGG + chr4_3:9151778-9151797 None:intergenic 35.0%
! TTCTATTTTCATGACTCCAG+AGG - chr4_3:9151777-9151796 Msa0628470:intron 35.0%
!! ACAGTTTGTTGATGAGTTTG+TGG - chr4_3:9151840-9151859 Msa0628470:intron 35.0%
CAACAAGAGATAGAAGTTAC+TGG - chr4_3:9151898-9151917 Msa0628470:intron 35.0%
AGAAGTTACTGGAACAAAGT+TGG - chr4_3:9151909-9151928 Msa0628470:intron 35.0%
CATTTCGTCAGAAATTCCTT+TGG + chr4_3:9152043-9152062 None:intergenic 35.0%
AAGGAATTTCTGACGAAATG+TGG - chr4_3:9152043-9152062 Msa0628470:intron 35.0%
AGGAATTTCTGACGAAATGT+GGG - chr4_3:9152044-9152063 Msa0628470:intron 35.0%
GATGTAAAAGAACCATCTGT+TGG - chr4_3:9152066-9152085 Msa0628470:intron 35.0%
TACTCATTATACCCAAAGTG+AGG - chr4_3:9152362-9152381 Msa0628470:intron 35.0%
ACTCATTATACCCAAAGTGA+GGG - chr4_3:9152363-9152382 Msa0628470:intron 35.0%
TCTCCAAATAAATTGGAGAG+TGG - chr4_3:9152447-9152466 Msa0628470:intron 35.0%
GATCCACTCTCCAATTTATT+TGG + chr4_3:9152453-9152472 None:intergenic 35.0%
GATTTGAAAGTCACTACTTC+TGG - chr4_3:9152537-9152556 Msa0628470:intron 35.0%
TTTACGATTTCTGCTGCAAT+AGG + chr4_3:9152609-9152628 None:intergenic 35.0%
GCAGCAGAAATCGTAAATAT+CGG - chr4_3:9152612-9152631 Msa0628470:intron 35.0%
AAGATGGAGAGTTGAAACAA+CGG - chr4_3:9152724-9152743 Msa0628470:intron 35.0%
AAAGTCAGGTTTCAAGAGAT+AGG - chr4_3:9152760-9152779 Msa0628470:intron 35.0%
! AAGAGATAGGTTTGATGACT+GGG - chr4_3:9152773-9152792 Msa0628470:intron 35.0%
CTGCTCAAGTTCAACATTAT+AGG + chr4_3:9152805-9152824 None:intergenic 35.0%
CTTCAAAACATCTCAACTCA+TGG - chr4_3:9153089-9153108 Msa0628470:intron 35.0%
! AGACTATCAGTAAGTTTTCC+TGG - chr4_3:9153112-9153131 Msa0628470:intron 35.0%
!! TGGTTGTTTTCATCAACTTG+AGG + chr4_3:9153310-9153329 None:intergenic 35.0%
GATGAAAACAACCAAATGCA+TGG - chr4_3:9153316-9153335 Msa0628470:intron 35.0%
CTTCAAATCTACCATGCATT+TGG + chr4_3:9153330-9153349 None:intergenic 35.0%
CAAATGCATGGTAGATTTGA+AGG - chr4_3:9153328-9153347 Msa0628470:intron 35.0%
! ATGATGTACCTTTTCTCCAA+AGG - chr4_3:9153400-9153419 Msa0628470:intron 35.0%
ACTCAATTCTACTTGGCATT+GGG + chr4_3:9153494-9153513 None:intergenic 35.0%
AACTCAATTCTACTTGGCAT+TGG + chr4_3:9153495-9153514 None:intergenic 35.0%
AATGCCAAGTAGAATTGAGT+TGG - chr4_3:9153494-9153513 Msa0628470:intron 35.0%
TATCACATGTATCGGATGAT+CGG + chr4_3:9153635-9153654 None:intergenic 35.0%
ACACATCTTGGAACTACTTT+CGG - chr4_3:9153709-9153728 Msa0628470:intron 35.0%
ACAAGAGAAGGGAGAATAAT+GGG + chr4_3:9153779-9153798 None:intergenic 35.0%
GTGGCTTAACTACAATAAAC+TGG - chr4_3:9153746-9153765 Msa0628470:intron 35.0%
ACATAGGAGAATATTTCCTC+TGG + chr4_3:9154204-9154223 None:intergenic 35.0%
AACAGAATTCCCTAGATTTC+AGG - chr4_3:9154286-9154305 Msa0628470:intron 35.0%
TTGGGCCTTTCATTAACATT+AGG - chr4_3:9154384-9154403 Msa0628470:CDS 35.0%
TTGGGCCTAATGTTAATGAA+AGG + chr4_3:9154392-9154411 None:intergenic 35.0%
CGCCATATGTTAGAACTATT+GGG + chr4_3:9154410-9154429 None:intergenic 35.0%
!! CCAATAGTTCTAACATATGG+CGG - chr4_3:9154408-9154427 Msa0628470:CDS 35.0%
! TATTGCAGTGTTATTGATGG+TGG + chr4_3:9154499-9154518 None:intergenic 35.0%
TTATGAAAAGGTCGGGTTAT+TGG + chr4_3:9154538-9154557 None:intergenic 35.0%
AATCTGGTGAACAGCATATA+GGG + chr4_3:9154633-9154652 None:intergenic 35.0%
AAATCTGGTGAACAGCATAT+AGG + chr4_3:9154634-9154653 None:intergenic 35.0%
AGGAAAAAGTTGTACAGTAC+CGG + chr4_3:9154822-9154841 None:intergenic 35.0%
!! TGTACAACTTTTTCCTGATG+TGG - chr4_3:9154826-9154845 Msa0628470:CDS 35.0%
!! CAGTTTTGTAAGGATGAGTT+AGG + chr4_3:9154920-9154939 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+TGG - chr4_3:9154918-9154937 Msa0628470:CDS 35.0%
GGATGTGATTCCTTTATAGA+AGG - chr4_3:9155141-9155160 Msa0628470:CDS 35.0%
!!! TTTTCCTTCTCTTTGGTGTT+TGG + chr4_3:9155392-9155411 None:intergenic 35.0%
AGTTGAGATACTGATACTTC+AGG - chr4_3:9155567-9155586 Msa0628470:CDS 35.0%
TTGAGATTGTTGCTACAACT+TGG + chr4_3:9155681-9155700 None:intergenic 35.0%
TTCAGAGTATGTTAGGAAAG+GGG - chr4_3:9155787-9155806 Msa0628470:CDS 35.0%
TAGTAGTGAATTGGAGTAAG+AGG - chr4_3:9156045-9156064 Msa0628470:CDS 35.0%
AAAGTGTAGTTTCCTGACAA+GGG + chr4_3:9156172-9156191 None:intergenic 35.0%
TAAAGTGTAGTTTCCTGACA+AGG + chr4_3:9156173-9156192 None:intergenic 35.0%
AAGAGTAGATACTGTTGTGT+GGG - chr4_3:9156241-9156260 Msa0628470:CDS 35.0%
AAAATGGACCCCACATTAAA+TGG - chr4_3:9156549-9156568 Msa0628470:CDS 35.0%
!!! AACTACTGTATTTTGGGATG+TGG - chr4_3:9156835-9156854 Msa0628470:CDS 35.0%
AGAATCTTGATGAGTTCAAC+TGG - chr4_3:9157092-9157111 Msa0628470:CDS 35.0%
! AAAAGCCTGCAAAGCAATTT+TGG + chr4_3:9157173-9157192 None:intergenic 35.0%
GAAATGAAAGTTGCAATTGG+TGG + chr4_3:9157563-9157582 None:intergenic 35.0%
GCCATCATCAAGAAAATACT+TGG - chr4_3:9157638-9157657 Msa0628470:CDS 35.0%
!! AAATTGGCTTGAATGAGAGA+AGG + chr4_3:9157693-9157712 None:intergenic 35.0%
AAGAAAAACAACTACTCCCT+AGG - chr4_3:9157749-9157768 Msa0628470:five_prime_UTR 35.0%
TTTGAGAATCTCCATTCCTA+GGG + chr4_3:9157768-9157787 None:intergenic 35.0%
!!! AGTTAAGTTGAGAACCCTTT+TGG - chr4_3:9157850-9157869 Msa0628470:intron 35.0%
! TTCCTTCTTGAAGAGTATGT+TGG - chr4_3:9157894-9157913 Msa0628470:intron 35.0%
TTCCAACATACTCTTCAAGA+AGG + chr4_3:9157899-9157918 None:intergenic 35.0%
TTTACTAACATGTAGCAACG+AGG - chr4_3:9157957-9157976 Msa0628470:intron 35.0%
TTACTAACATGTAGCAACGA+GGG - chr4_3:9157958-9157977 Msa0628470:intron 35.0%
!!! ACTGGTTTTCATGGTCATAT+TGG + chr4_3:9158031-9158050 None:intergenic 35.0%
!! TGGTAATGGTGATTGATAAC+TGG + chr4_3:9158049-9158068 None:intergenic 35.0%
GAATACATTCCCTCGTTATT+TGG + chr4_3:9158126-9158145 None:intergenic 35.0%
! AAAGAAGGCACAAGAGCTTT+AGG - chr4_3:9149060-9149079 Msa0628470:three_prime_UTR 40.0%
AAATTGGAATCTGCAGCAAC+CGG - chr4_3:9149097-9149116 Msa0628470:three_prime_UTR 40.0%
ATTGTTTGTGTCCTGTGACT+TGG - chr4_3:9149242-9149261 Msa0628470:three_prime_UTR 40.0%
TTGTTTGTGTCCTGTGACTT+GGG - chr4_3:9149243-9149262 Msa0628470:three_prime_UTR 40.0%
GTGCATCAGATAACACTGTT+TGG - chr4_3:9149455-9149474 Msa0628470:three_prime_UTR 40.0%
CCTTCAATTACAACTGAGCT+AGG + chr4_3:9149484-9149503 None:intergenic 40.0%
CCTAGCTCAGTTGTAATTGA+AGG - chr4_3:9149481-9149500 Msa0628470:three_prime_UTR 40.0%
ATTGAAGGAACCACATCACT+CGG - chr4_3:9149496-9149515 Msa0628470:three_prime_UTR 40.0%
TTTGCAGCTGACACCATATA+TGG + chr4_3:9149571-9149590 None:intergenic 40.0%
CTCAACCCATTTAGAAGACA+AGG + chr4_3:9149729-9149748 None:intergenic 40.0%
!! CTTGTCTTCTAAATGGGTTG+AGG - chr4_3:9149727-9149746 Msa0628470:intron 40.0%
TGCTGACAATTGAAGAAGAG+TGG + chr4_3:9149757-9149776 None:intergenic 40.0%
TTCAATTGTCAGCAACTAGG+AGG - chr4_3:9149763-9149782 Msa0628470:intron 40.0%
TACTGTTCTCGAGTTCCTTA+TGG - chr4_3:9149810-9149829 Msa0628470:exon 40.0%
!! GTTCCTTATGGTCTTGTTAG+AGG - chr4_3:9149822-9149841 Msa0628470:CDS 40.0%
GAACCTCTAACAAGACCATA+AGG + chr4_3:9149828-9149847 None:intergenic 40.0%
!!! AGTTCTCAGCTTTTTGAGTG+AGG - chr4_3:9149995-9150014 Msa0628470:CDS 40.0%
CGAAGACACATTCTTCGATT+TGG + chr4_3:9150045-9150064 None:intergenic 40.0%
TTCTCTTCTCAAGTCTATGG+AGG + chr4_3:9150183-9150202 None:intergenic 40.0%
GCATTCTCTTCTCAAGTCTA+TGG + chr4_3:9150186-9150205 None:intergenic 40.0%
TCTTATTACACACTCTCGTC+CGG - chr4_3:9150284-9150303 Msa0628470:intron 40.0%
CATGTCACTCTCAAAATCTC+CGG + chr4_3:9150306-9150325 None:intergenic 40.0%
! CATGGAAGTGCAGCATAATA+TGG - chr4_3:9150322-9150341 Msa0628470:intron 40.0%
AGTGCAGCATAATATGGGTT+TGG - chr4_3:9150328-9150347 Msa0628470:intron 40.0%
! GGGTTTGGAAGAATTTTCAC+TGG - chr4_3:9150343-9150362 Msa0628470:intron 40.0%
! ATTTTCACTGGGATATGAGG+AGG - chr4_3:9150355-9150374 Msa0628470:intron 40.0%
GCAAAGAGTTGACCAAAAGA+AGG - chr4_3:9150424-9150443 Msa0628470:intron 40.0%
TGTGGTATCAGTTTCCTGAA+AGG + chr4_3:9150543-9150562 None:intergenic 40.0%
GGATCTACAATGCATGAATC+TGG - chr4_3:9150590-9150609 Msa0628470:intron 40.0%
TCTTCATATGCACAAGAGTC+TGG - chr4_3:9150740-9150759 Msa0628470:intron 40.0%
GATATCAGAAACACGTTTGC+AGG - chr4_3:9150952-9150971 Msa0628470:CDS 40.0%
CTCTATTACATCCTCTGTTG+TGG + chr4_3:9151020-9151039 None:intergenic 40.0%
GTTCTTCATCCTAGTATCAG+AGG + chr4_3:9151095-9151114 None:intergenic 40.0%
CAATGGTCTTCTCTCCTTTA+CGG + chr4_3:9151174-9151193 None:intergenic 40.0%
ATACACGACTCCAAACTGAT+AGG - chr4_3:9151341-9151360 Msa0628470:intron 40.0%
TGAACATGTCAGCACTTTAC+CGG - chr4_3:9151399-9151418 Msa0628470:intron 40.0%
!!! GCTGATGCCGATTTACTTTT+TGG + chr4_3:9151493-9151512 None:intergenic 40.0%
GTTCTTCCCAAACTGAAGAA+AGG - chr4_3:9151530-9151549 Msa0628470:intron 40.0%
CTAATGACCACCAAAGATCT+AGG - chr4_3:9151566-9151585 Msa0628470:intron 40.0%
AAGAAGGGTTCCTAGATCTT+TGG + chr4_3:9151579-9151598 None:intergenic 40.0%
AGCTGAAACTCTACCCATTT+GGG + chr4_3:9151602-9151621 None:intergenic 40.0%
CTCATGTTGAACAAACTGCT+GGG - chr4_3:9151620-9151639 Msa0628470:intron 40.0%
GAAGCTTCAAGGTAGATATC+AGG + chr4_3:9151655-9151674 None:intergenic 40.0%
TACCTTGAAGCTTCAGAAAG+TGG - chr4_3:9151661-9151680 Msa0628470:intron 40.0%
TCTGCTTTGTATGCCAATTC+CGG - chr4_3:9151688-9151707 Msa0628470:intron 40.0%
AAACATAGCAGGACTTCTTC+CGG + chr4_3:9151710-9151729 None:intergenic 40.0%
! AGAAGTCCTGCTATGTTTTC+AGG - chr4_3:9151712-9151731 Msa0628470:intron 40.0%
TGTGATCCTGAAAACATAGC+AGG + chr4_3:9151721-9151740 None:intergenic 40.0%
! TTGTTGATGAGTTTGTGGAG+AGG - chr4_3:9151845-9151864 Msa0628470:intron 40.0%
! TGTTGATGAGTTTGTGGAGA+GGG - chr4_3:9151846-9151865 Msa0628470:intron 40.0%
CTGATTATCCTCAACATCAG+AGG + chr4_3:9151935-9151954 None:intergenic 40.0%
ATGAACAGTTCAAGGCAACA+AGG - chr4_3:9151955-9151974 Msa0628470:intron 40.0%
GCAGTTTCATTGTTGATCTC+TGG + chr4_3:9152114-9152133 None:intergenic 40.0%
! GTCTCACTGTCAGATTTGTT+TGG + chr4_3:9152261-9152280 None:intergenic 40.0%
ACAAATCTGACAGTGAGACA+TGG - chr4_3:9152262-9152281 Msa0628470:intron 40.0%
TTATCAGAAGTCATGGCTTG+TGG + chr4_3:9152330-9152349 None:intergenic 40.0%
CTTTGGGTATAATGAGTACC+TGG + chr4_3:9152360-9152379 None:intergenic 40.0%
GAGAGTGGATCAACATCAAT+AGG - chr4_3:9152462-9152481 Msa0628470:intron 40.0%
GGTTGCCCTCTAATAGATAA+TGG + chr4_3:9152588-9152607 None:intergenic 40.0%
GCAGAAATCGTAAATATCGG+TGG - chr4_3:9152615-9152634 Msa0628470:intron 40.0%
TGAAACAACGGAAGTTTCAG+CGG - chr4_3:9152736-9152755 Msa0628470:intron 40.0%
! CAAGAGATAGGTTTGATGAC+TGG - chr4_3:9152772-9152791 Msa0628470:intron 40.0%
!!! GTTCATGAAGGAAGCACTTT+TGG - chr4_3:9152842-9152861 Msa0628470:intron 40.0%
GTTCCAGAGTAGAAGAGTTA+CGG - chr4_3:9153026-9153045 Msa0628470:intron 40.0%
TTCCAGAGTAGAAGAGTTAC+GGG - chr4_3:9153027-9153046 Msa0628470:intron 40.0%
! TTTTCTCCAAAGGAGCTCTA+GGG - chr4_3:9153410-9153429 Msa0628470:intron 40.0%
CTCAATTCTACTTGGCATTG+GGG + chr4_3:9153493-9153512 None:intergenic 40.0%
TGCTCCAACTCAATTCTACT+TGG + chr4_3:9153501-9153520 None:intergenic 40.0%
ATCACATGTATCGGATGATC+GGG + chr4_3:9153634-9153653 None:intergenic 40.0%
CCAAGATGTGTCCTAAAGAA+AGG + chr4_3:9153700-9153719 None:intergenic 40.0%
!! CCTTTCTTTAGGACACATCT+TGG - chr4_3:9153697-9153716 Msa0628470:intron 40.0%
CACATCTTGGAACTACTTTC+GGG - chr4_3:9153710-9153729 Msa0628470:intron 40.0%
!! AGAAGGGAGAATAATGGGTT+TGG + chr4_3:9153774-9153793 None:intergenic 40.0%
CACAAGAGAAGGGAGAATAA+TGG + chr4_3:9153780-9153799 None:intergenic 40.0%
CATTATTCTCCCTTCTCTTG+TGG - chr4_3:9153778-9153797 Msa0628470:intron 40.0%
GTAGTTAAGCCACAAGAGAA+GGG + chr4_3:9153790-9153809 None:intergenic 40.0%
TGTAGTTAAGCCACAAGAGA+AGG + chr4_3:9153791-9153810 None:intergenic 40.0%
! GGGTTTGACTTTGATCGAAT+AGG + chr4_3:9153831-9153850 None:intergenic 40.0%
AGAGTTCTCAAATAGCAGTC+AGG - chr4_3:9154011-9154030 Msa0628470:intron 40.0%
GAGTTCTCAAATAGCAGTCA+GGG - chr4_3:9154012-9154031 Msa0628470:intron 40.0%
GAGAATATTTCCTCTGGTAG+GGG + chr4_3:9154198-9154217 None:intergenic 40.0%
GGAGAATATTTCCTCTGGTA+GGG + chr4_3:9154199-9154218 None:intergenic 40.0%
AGGAGAATATTTCCTCTGGT+AGG + chr4_3:9154200-9154219 None:intergenic 40.0%
AGAGGGGAATATATTGAGGA+GGG + chr4_3:9154263-9154282 None:intergenic 40.0%
TAGCAGAGGGGAATATATTG+AGG + chr4_3:9154267-9154286 None:intergenic 40.0%
TAGGGAATTCTGTTAGCAGA+GGG + chr4_3:9154280-9154299 None:intergenic 40.0%
GGAAACGTTCCTGAAATCTA+GGG + chr4_3:9154298-9154317 None:intergenic 40.0%
TGGAAACGTTCCTGAAATCT+AGG + chr4_3:9154299-9154318 None:intergenic 40.0%
GAATAAGTTAGTGACATGGC+TGG + chr4_3:9154319-9154338 None:intergenic 40.0%
ACTATCCACACCTCATGATT+GGG - chr4_3:9154366-9154385 Msa0628470:CDS 40.0%
TAATGAAAGGCCCAATCATG+AGG + chr4_3:9154379-9154398 None:intergenic 40.0%
!! GGCCCAATAGTTCTAACATA+TGG - chr4_3:9154405-9154424 Msa0628470:CDS 40.0%
CCGCCATATGTTAGAACTAT+TGG + chr4_3:9154411-9154430 None:intergenic 40.0%
ATTTACACTATACGACGCCA+TGG + chr4_3:9154436-9154455 None:intergenic 40.0%
ATGGCGTCGTATAGTGTAAA+TGG - chr4_3:9154435-9154454 Msa0628470:CDS 40.0%
!! TTATTGATGGTGGACCATTG+TGG + chr4_3:9154489-9154508 None:intergenic 40.0%
GTCCCTTAATATAGACATGC+AGG - chr4_3:9154730-9154749 Msa0628470:CDS 40.0%
CGCCTGCATGTCTATATTAA+GGG + chr4_3:9154735-9154754 None:intergenic 40.0%
ACGCCTGCATGTCTATATTA+AGG + chr4_3:9154736-9154755 None:intergenic 40.0%
!! CCTTACAAGCCAGTTTTGTA+AGG + chr4_3:9154930-9154949 None:intergenic 40.0%
!! CCTTACAAAACTGGCTTGTA+AGG - chr4_3:9154927-9154946 Msa0628470:CDS 40.0%
! AGAGTACTATCTATCCGATG+TGG - chr4_3:9154983-9155002 Msa0628470:CDS 40.0%
GAGTACTATCTATCCGATGT+GGG - chr4_3:9154984-9155003 Msa0628470:CDS 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG + chr4_3:9155021-9155040 None:intergenic 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG + chr4_3:9155022-9155041 None:intergenic 40.0%
CTAACCAAAGGTCGCAATTT+AGG - chr4_3:9155064-9155083 Msa0628470:CDS 40.0%
TGGAAATTCCGCCTTAATAG+CGG + chr4_3:9155104-9155123 None:intergenic 40.0%
TCCAACACAATGCTGTCATT+AGG - chr4_3:9155120-9155139 Msa0628470:CDS 40.0%
TCCTAATGACAGCATTGTGT+TGG + chr4_3:9155124-9155143 None:intergenic 40.0%
TAGGGAGGAACCTTCTATAA+AGG + chr4_3:9155154-9155173 None:intergenic 40.0%
!! AGCAACTGGGTTGTTTTCTA+GGG + chr4_3:9155332-9155351 None:intergenic 40.0%
!! TAGCAACTGGGTTGTTTTCT+AGG + chr4_3:9155333-9155352 None:intergenic 40.0%
AGAAAACAACCCAGTTGCTA+TGG - chr4_3:9155333-9155352 Msa0628470:CDS 40.0%
GAAAACAACCCAGTTGCTAT+GGG - chr4_3:9155334-9155353 Msa0628470:CDS 40.0%
ATCAGATTCCCATAGCAACT+GGG + chr4_3:9155345-9155364 None:intergenic 40.0%
TATCAGATTCCCATAGCAAC+TGG + chr4_3:9155346-9155365 None:intergenic 40.0%
TGATACAGCAGTCTGATAAG+AGG - chr4_3:9155361-9155380 Msa0628470:CDS 40.0%
GAAGAGAGAGTGATACTTCA+AGG + chr4_3:9155444-9155463 None:intergenic 40.0%
TCAGAGTATGTTAGGAAAGG+GGG - chr4_3:9155788-9155807 Msa0628470:CDS 40.0%
ATTCCAGTTTCCTTTCCCTA+AGG - chr4_3:9155852-9155871 Msa0628470:CDS 40.0%
CTCAACTTAATTCCGCCTTA+GGG + chr4_3:9155870-9155889 None:intergenic 40.0%
TCTCAACTTAATTCCGCCTT+AGG + chr4_3:9155871-9155890 None:intergenic 40.0%
GACACAAATTTACCCTTGTC+AGG - chr4_3:9156157-9156176 Msa0628470:CDS 40.0%
ATCTACTCTTGCCTGAAGAA+TGG + chr4_3:9156231-9156250 None:intergenic 40.0%
CAAGAGTAGATACTGTTGTG+TGG - chr4_3:9156240-9156259 Msa0628470:CDS 40.0%
AGAGTAGATACTGTTGTGTG+GGG - chr4_3:9156242-9156261 Msa0628470:CDS 40.0%
TCAGCTCCAAGAAGCTTATT+GGG + chr4_3:9156272-9156291 None:intergenic 40.0%
ATCAGCTCCAAGAAGCTTAT+TGG + chr4_3:9156273-9156292 None:intergenic 40.0%
AATAAGCTTCTTGGAGCTGA+TGG - chr4_3:9156272-9156291 Msa0628470:CDS 40.0%
GTACATTCAATGCGACAAGA+GGG + chr4_3:9156511-9156530 None:intergenic 40.0%
TTGTCGCATTGAATGTACGT+GGG - chr4_3:9156513-9156532 Msa0628470:CDS 40.0%
!! GGGTTCCACCATTTTGAAAA+TGG - chr4_3:9156533-9156552 Msa0628470:CDS 40.0%
! TGTGGGGTCCATTTTCAAAA+TGG + chr4_3:9156544-9156563 None:intergenic 40.0%
TTGACCAAGTTAACCAGAGA+CGG + chr4_3:9156620-9156639 None:intergenic 40.0%
! AGCAAAGAATTGAGTTGCAG+AGG + chr4_3:9156878-9156897 None:intergenic 40.0%
GATGACCAAAATTGCTTTGC+AGG - chr4_3:9157165-9157184 Msa0628470:CDS 40.0%
!! AGAAAGTGTCTCAGAAGCAA+GGG - chr4_3:9157205-9157224 Msa0628470:CDS 40.0%
! TGATGGGTAGTAATAGGAAG+TGG + chr4_3:9157359-9157378 None:intergenic 40.0%
!! GAAGGATGATGGGTAGTAAT+AGG + chr4_3:9157365-9157384 None:intergenic 40.0%
GAGTAACTTGGAAGGATGAT+GGG + chr4_3:9157375-9157394 None:intergenic 40.0%
TGAGTAACTTGGAAGGATGA+TGG + chr4_3:9157376-9157395 None:intergenic 40.0%
AAACAACTACTCCCTAGGAA+TGG - chr4_3:9157754-9157773 Msa0628470:five_prime_UTR 40.0%
! CTTTGAGAATCTCCATTCCT+AGG + chr4_3:9157769-9157788 None:intergenic 40.0%
TCTCAAAGCATATGCAAGCA+TGG - chr4_3:9157781-9157800 Msa0628470:five_prime_UTR 40.0%
!! TAAGTTGAGAACCCTTTTGG+CGG - chr4_3:9157853-9157872 Msa0628470:intron 40.0%
!!! TGCTGATTTTTCCGCCAAAA+GGG + chr4_3:9157867-9157886 None:intergenic 40.0%
TCACATGCGAACTCATGAAA+AGG - chr4_3:9157921-9157940 Msa0628470:intron 40.0%
ATGCGAACTCATGAAAAGGT+TGG - chr4_3:9157925-9157944 Msa0628470:intron 40.0%
!! AATCTTGGAGTTGGTCGTTT+TGG + chr4_3:9158087-9158106 None:intergenic 40.0%
CAGAAACCAAATCGCAATCC+CGG - chr4_3:9149010-9149029 Msa0628470:three_prime_UTR 45.0%
GACGGTAGCTGATAGGATAA+CGG - chr4_3:9149034-9149053 Msa0628470:three_prime_UTR 45.0%
! AGCAACCGGAAGTTTGAGAT+CGG - chr4_3:9149111-9149130 Msa0628470:three_prime_UTR 45.0%
TGTTTGTGTCCTGTGACTTG+GGG - chr4_3:9149244-9149263 Msa0628470:three_prime_UTR 45.0%
! GACATGAGAGTGTGACAATC+AGG - chr4_3:9149282-9149301 Msa0628470:three_prime_UTR 45.0%
TCTATTGGGACAGGTGTGAA+AGG - chr4_3:9149380-9149399 Msa0628470:three_prime_UTR 45.0%
GCATGACAAACACTGTGACA+AGG + chr4_3:9149655-9149674 None:intergenic 45.0%
CACAACAGTCACAACAACCA+CGG + chr4_3:9149677-9149696 None:intergenic 45.0%
CTTTACGGGTACTCTATAGG+TGG + chr4_3:9149706-9149725 None:intergenic 45.0%
AGGCTTTACGGGTACTCTAT+AGG + chr4_3:9149709-9149728 None:intergenic 45.0%
AAGGAACTCGAGAACAGTAC+AGG + chr4_3:9149809-9149828 None:intergenic 45.0%
TTTGCTCAGCCTCACAGAAA+GGG - chr4_3:9149925-9149944 Msa0628470:CDS 45.0%
TCTTTCTCTCCCTTTCTGTG+AGG + chr4_3:9149937-9149956 None:intergenic 45.0%
TGTGTCTTCGTCCAACAGAA+CGG - chr4_3:9150055-9150074 Msa0628470:intron 45.0%
!! CGGAGATTTTGAGAGTGACA+TGG - chr4_3:9150304-9150323 Msa0628470:intron 45.0%
TCCGAAAAAATGCTGACCGA+GGG - chr4_3:9150515-9150534 Msa0628470:intron 45.0%
!!! TCCCTCGGTCAGCATTTTTT+CGG + chr4_3:9150519-9150538 None:intergenic 45.0%
AGTTTCCTGAAAGGTTCCCT+CGG + chr4_3:9150534-9150553 None:intergenic 45.0%
!! GTTGGTTCTACTTCTACCAC+CGG - chr4_3:9150875-9150894 Msa0628470:intron 45.0%
TTCTACTTCTACCACCGGAA+CGG - chr4_3:9150880-9150899 Msa0628470:intron 45.0%
TTTCAAACTTTCCGTTCCGG+TGG + chr4_3:9150894-9150913 None:intergenic 45.0%
CTGAAAGGACCTCTGATACT+AGG - chr4_3:9151083-9151102 Msa0628470:intron 45.0%
!!! TTCGGTTTTGAGTTCTGCTC+AGG - chr4_3:9151132-9151151 Msa0628470:intron 45.0%
!!! TCGGTTTTGAGTTCTGCTCA+GGG - chr4_3:9151133-9151152 Msa0628470:intron 45.0%
GAGTTCTCCTCCTATCAGTT+TGG + chr4_3:9151354-9151373 None:intergenic 45.0%
! CAGAGTGCTCAACATAGCAA+AGG - chr4_3:9151373-9151392 Msa0628470:intron 45.0%
AAGGGTTCCTAGATCTTTGG+TGG + chr4_3:9151576-9151595 None:intergenic 45.0%
TAGGAACCCTTCTTCCCAAA+TGG - chr4_3:9151585-9151604 Msa0628470:intron 45.0%
AGGAACCCTTCTTCCCAAAT+GGG - chr4_3:9151586-9151605 Msa0628470:intron 45.0%
CTCTACCCATTTGGGAAGAA+GGG + chr4_3:9151594-9151613 None:intergenic 45.0%
ACTCTACCCATTTGGGAAGA+AGG + chr4_3:9151595-9151614 None:intergenic 45.0%
GAGCTGAAACTCTACCCATT+TGG + chr4_3:9151603-9151622 None:intergenic 45.0%
GCTCATGTTGAACAAACTGC+TGG - chr4_3:9151619-9151638 Msa0628470:intron 45.0%
!! AGCCACTTTCTGAAGCTTCA+AGG + chr4_3:9151666-9151685 None:intergenic 45.0%
!! TGGTTCAGCTAGTCGTTTTG+AGG - chr4_3:9151807-9151826 Msa0628470:intron 45.0%
! AAAGTTGGCCTCTGATGTTG+AGG - chr4_3:9151924-9151943 Msa0628470:intron 45.0%
AAAGAACCATCTGTTGGGCA+TGG - chr4_3:9152072-9152091 Msa0628470:intron 45.0%
AAAGAACAGGAAGGTCCATG+TGG - chr4_3:9152148-9152167 Msa0628470:intron 45.0%
AAGAACAGGAAGGTCCATGT+GGG - chr4_3:9152149-9152168 Msa0628470:intron 45.0%
! ATCAGAAAGCATACCCCACA+TGG + chr4_3:9152166-9152185 None:intergenic 45.0%
ACAGTGAGACATGGCATTCT+GGG - chr4_3:9152271-9152290 Msa0628470:intron 45.0%
AGACACATCTCCCTCACTTT+GGG + chr4_3:9152376-9152395 None:intergenic 45.0%
!! GGAGCAACGGGTTCTTTTAT+CGG + chr4_3:9152672-9152691 None:intergenic 45.0%
TTCAGTCTTCACTGGAGCAA+CGG + chr4_3:9152685-9152704 None:intergenic 45.0%
CCAGACATTTCAGTCTTCAC+TGG + chr4_3:9152693-9152712 None:intergenic 45.0%
CCAGTGAAGACTGAAATGTC+TGG - chr4_3:9152690-9152709 Msa0628470:intron 45.0%
! TCTGGCTCAGACAGAAAAGA+TGG - chr4_3:9152708-9152727 Msa0628470:intron 45.0%
GAAGTTTCAGCGGAAAAGTC+AGG - chr4_3:9152746-9152765 Msa0628470:intron 45.0%
!! AGCACTTTTGGAAGCCAGAA+AGG - chr4_3:9152854-9152873 Msa0628470:intron 45.0%
CAGAAAGGCCGGTGATATTT+GGG - chr4_3:9152869-9152888 Msa0628470:intron 45.0%
! CTAGAGCTCCTTTGGAGAAA+AGG + chr4_3:9153411-9153430 None:intergenic 45.0%
! CTTTTCTCCAAAGGAGCTCT+AGG - chr4_3:9153409-9153428 Msa0628470:intron 45.0%
!! TTGGCATTGGGGTTCGTTTT+TGG + chr4_3:9153482-9153501 None:intergenic 45.0%
TTCGGGATCATTGTTCAGTG+TGG - chr4_3:9153727-9153746 Msa0628470:intron 45.0%
ATGCTCTTCCACTTGTTCTG+TGG - chr4_3:9153904-9153923 Msa0628470:intron 45.0%
TGCTCTTCCACTTGTTCTGT+GGG - chr4_3:9153905-9153924 Msa0628470:intron 45.0%
AAGCAATCCCACAGAACAAG+TGG + chr4_3:9153915-9153934 None:intergenic 45.0%
TTCTCAAATAGCAGTCAGGG+CGG - chr4_3:9154015-9154034 Msa0628470:intron 45.0%
GGTGTCAAAAATTCAGCCAC+AGG + chr4_3:9154055-9154074 None:intergenic 45.0%
! GGCTGAATTTTTGACACCCA+TGG - chr4_3:9154057-9154076 Msa0628470:intron 45.0%
ATCCTTCACAATGTGGCCAT+GGG + chr4_3:9154076-9154095 None:intergenic 45.0%
CAGAGGGGAATATATTGAGG+AGG + chr4_3:9154264-9154283 None:intergenic 45.0%
AGGGAATTCTGTTAGCAGAG+GGG + chr4_3:9154279-9154298 None:intergenic 45.0%
CTAGGGAATTCTGTTAGCAG+AGG + chr4_3:9154281-9154300 None:intergenic 45.0%
TCTTCTCTTTCTTCTCCGTG+CGG - chr4_3:9154337-9154356 Msa0628470:CDS 45.0%
CACTATCCACACCTCATGAT+TGG - chr4_3:9154365-9154384 Msa0628470:CDS 45.0%
GCGTCGTATAGTGTAAATGG+AGG - chr4_3:9154438-9154457 Msa0628470:CDS 45.0%
GGACCATTGTGGAAGACAAA+CGG + chr4_3:9154478-9154497 None:intergenic 45.0%
! TGAATCTAGGACACCACATC+AGG + chr4_3:9154842-9154861 None:intergenic 45.0%
!! CAAAACTGGCTTGTAAGGTG+AGG - chr4_3:9154932-9154951 Msa0628470:CDS 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG + chr4_3:9155020-9155039 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG + chr4_3:9155023-9155042 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG - chr4_3:9155020-9155039 Msa0628470:CDS 45.0%
! AGCCAACACAATGAAGGTGT+TGG - chr4_3:9155026-9155045 Msa0628470:CDS 45.0%
CTCCAACACCTTCATTGTGT+TGG + chr4_3:9155031-9155050 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - chr4_3:9155029-9155048 Msa0628470:CDS 45.0%
CTGCAATGAAGGCTAACCAA+AGG - chr4_3:9155052-9155071 Msa0628470:CDS 45.0%
GTCACCTAAATTGCGACCTT+TGG + chr4_3:9155071-9155090 None:intergenic 45.0%
AAGGTCGCAATTTAGGTGAC+TGG - chr4_3:9155071-9155090 Msa0628470:CDS 45.0%
AAAAAACCATTTGCCGGACG+TGG - chr4_3:9155201-9155220 Msa0628470:CDS 45.0%
AAAATACCACGTCCGGCAAA+TGG + chr4_3:9155210-9155229 None:intergenic 45.0%
TGGATACGATATCGTCCAGA+AGG - chr4_3:9155279-9155298 Msa0628470:CDS 45.0%
GGATACGATATCGTCCAGAA+GGG - chr4_3:9155280-9155299 Msa0628470:CDS 45.0%
! TTTGCTGTGTAGTTCCCTTC+TGG + chr4_3:9155297-9155316 None:intergenic 45.0%
!! GCAACTGGGTTGTTTTCTAG+GGG + chr4_3:9155331-9155350 None:intergenic 45.0%
CGAACCAAACACCAAAGAGA+AGG - chr4_3:9155385-9155404 Msa0628470:CDS 45.0%
CAGAGTATGTTAGGAAAGGG+GGG - chr4_3:9155789-9155808 Msa0628470:CDS 45.0%
CTTAATTCCGCCTTAGGGAA+AGG + chr4_3:9155865-9155884 None:intergenic 45.0%
!! GTGTTGCTTGCACTACTCAT+AGG + chr4_3:9156453-9156472 None:intergenic 45.0%
CGTACATTCAATGCGACAAG+AGG + chr4_3:9156512-9156531 None:intergenic 45.0%
CTTGTCGCATTGAATGTACG+TGG - chr4_3:9156512-9156531 Msa0628470:CDS 45.0%
! GGGGTCCATTTTCAAAATGG+TGG + chr4_3:9156541-9156560 None:intergenic 45.0%
ATGGACCCCACATTAAATGG+TGG - chr4_3:9156552-9156571 Msa0628470:CDS 45.0%
TGGACCCCACATTAAATGGT+GGG - chr4_3:9156553-9156572 Msa0628470:CDS 45.0%
TAGGCCCCACCATTTAATGT+GGG + chr4_3:9156561-9156580 None:intergenic 45.0%
! CATTTTTCTATCGCCGTCTC+TGG - chr4_3:9156604-9156623 Msa0628470:CDS 45.0%
!! ACTGGACCTTAGTCTTGTCT+TGG - chr4_3:9157110-9157129 Msa0628470:CDS 45.0%
AGACACTTTCTCCTCCATCA+GGG + chr4_3:9157196-9157215 None:intergenic 45.0%
!! GAGAAAGTGTCTCAGAAGCA+AGG - chr4_3:9157204-9157223 Msa0628470:CDS 45.0%
TGTTCTGTTTGTAAGAGGGC+AGG - chr4_3:9157423-9157442 Msa0628470:CDS 45.0%
CAATCACCTATGAGCTGTTG+TGG - chr4_3:9157524-9157543 Msa0628470:CDS 45.0%
TACAGTCCACAACAGCTCAT+AGG + chr4_3:9157533-9157552 None:intergenic 45.0%
!!! GTGCTGATTTTTCCGCCAAA+AGG + chr4_3:9157868-9157887 None:intergenic 45.0%
!! GTTGGCTTGAATCTTGGAGT+TGG + chr4_3:9158096-9158115 None:intergenic 45.0%
!! CTAAAATATATTAAAATAAA+AGG - chr4_3:9155473-9155492 Msa0628470:CDS 5.0%
!! TTTATTATTATAATAAGAAA+AGG - chr4_3:9156688-9156707 Msa0628470:CDS 5.0%
!! CGGGATTGCGATTTGGTTTC+TGG + chr4_3:9149012-9149031 None:intergenic 50.0%
AAGGAACCACATCACTCGGT+GGG - chr4_3:9149500-9149519 Msa0628470:three_prime_UTR 50.0%
TCACAGTGTTTGTCATGCCG+TGG - chr4_3:9149657-9149676 Msa0628470:intron 50.0%
GTTTGCTCAGCCTCACAGAA+AGG - chr4_3:9149924-9149943 Msa0628470:CDS 50.0%
CTTCTTGGCTTCCGTTCTGT+TGG + chr4_3:9150069-9150088 None:intergenic 50.0%
GATGAAGCAAACCGTGTGGA+GGG - chr4_3:9150377-9150396 Msa0628470:intron 50.0%
CCTTTACGTTTCCCTCCACA+CGG + chr4_3:9150391-9150410 None:intergenic 50.0%
! AAACGTCGTGCGCCTTCTTT+TGG + chr4_3:9150439-9150458 None:intergenic 50.0%
GTCCGAAAAAATGCTGACCG+AGG - chr4_3:9150514-9150533 Msa0628470:intron 50.0%
ACAGGAGCAAGTCCATAGTG+AGG - chr4_3:9150634-9150653 Msa0628470:intron 50.0%
GTGGCAATGAAGGGAGTCTT+GGG - chr4_3:9150930-9150949 Msa0628470:intron 50.0%
! TTTGAGTTCTGCTCAGGGAG+TGG - chr4_3:9151138-9151157 Msa0628470:intron 50.0%
GTGGAGTTGCAACACCGTAA+AGG - chr4_3:9151157-9151176 Msa0628470:intron 50.0%
CACGACTCCAAACTGATAGG+AGG - chr4_3:9151344-9151363 Msa0628470:intron 50.0%
CATGTCAGCACTTTACCGGA+AGG - chr4_3:9151403-9151422 Msa0628470:intron 50.0%
TCGTCACTGTCAAAGCCTTC+CGG + chr4_3:9151421-9151440 None:intergenic 50.0%
AGCAGGACTTCTTCCGGAAT+TGG + chr4_3:9151704-9151723 None:intergenic 50.0%
ATGACTCCAGAGGATGTGCT+TGG - chr4_3:9151787-9151806 Msa0628470:intron 50.0%
ATGAGTTTGTGGAGAGGGTC+AGG - chr4_3:9151851-9151870 Msa0628470:intron 50.0%
AGCCATTCCACTGGGTTTCT+GGG - chr4_3:9152015-9152034 Msa0628470:intron 50.0%
GATAGACCATGCCCAACAGA+TGG + chr4_3:9152081-9152100 None:intergenic 50.0%
AGAACAGGAAGGTCCATGTG+GGG - chr4_3:9152150-9152169 Msa0628470:intron 50.0%
TTACGTTGGAGTTCACGTGC+TGG - chr4_3:9152195-9152214 Msa0628470:intron 50.0%
! CTGGTTCTTCCGCTTCTTCT+GGG - chr4_3:9152214-9152233 Msa0628470:intron 50.0%
ACCTGATCTCCCAGAAGAAG+CGG + chr4_3:9152226-9152245 None:intergenic 50.0%
GACAGTGAGACATGGCATTC+TGG - chr4_3:9152270-9152289 Msa0628470:intron 50.0%
CAGACACATCTCCCTCACTT+TGG + chr4_3:9152377-9152396 None:intergenic 50.0%
ATAGGCACCTCATATGCTGC+TGG - chr4_3:9152480-9152499 Msa0628470:intron 50.0%
TTCCTCTCCAGCAGCATATG+AGG + chr4_3:9152490-9152509 None:intergenic 50.0%
!! CGGCATCACTGATTCAGTTC+TGG + chr4_3:9152652-9152671 None:intergenic 50.0%
TCAGTCTTCACTGGAGCAAC+GGG + chr4_3:9152684-9152703 None:intergenic 50.0%
!! CTTTTGGAAGCCAGAAAGGC+CGG - chr4_3:9152858-9152877 Msa0628470:intron 50.0%
CCAAATATCACCGGCCTTTC+TGG + chr4_3:9152871-9152890 None:intergenic 50.0%
CCAGAAAGGCCGGTGATATT+TGG - chr4_3:9152868-9152887 Msa0628470:intron 50.0%
AAAGGCCGGTGATATTTGGG+AGG - chr4_3:9152872-9152891 Msa0628470:intron 50.0%
AGGGACCTCCCAAATATCAC+CGG + chr4_3:9152880-9152899 None:intergenic 50.0%
GATATTTGGGAGGTCCCTGT+TGG - chr4_3:9152882-9152901 Msa0628470:intron 50.0%
GCACAAGAACAGCACCAACA+GGG + chr4_3:9152899-9152918 None:intergenic 50.0%
TGCACAAGAACAGCACCAAC+AGG + chr4_3:9152900-9152919 None:intergenic 50.0%
GTCCCGTAACTCTTCTACTC+TGG + chr4_3:9153032-9153051 None:intergenic 50.0%
AAGCAACCCTAGAGCTCCTT+TGG + chr4_3:9153419-9153438 None:intergenic 50.0%
GCAACGTGACACTGCTATTG+CGG + chr4_3:9153565-9153584 None:intergenic 50.0%
GGTGCAATGTTGGATTCCTG+TGG - chr4_3:9154036-9154055 Msa0628470:intron 50.0%
CATCCTTCACAATGTGGCCA+TGG + chr4_3:9154077-9154096 None:intergenic 50.0%
CATGGCCACATTGTGAAGGA+TGG - chr4_3:9154075-9154094 Msa0628470:intron 50.0%
CACCACCATCCTTCACAATG+TGG + chr4_3:9154083-9154102 None:intergenic 50.0%
TTGAGGAGGGTAGTGTCGTA+TGG + chr4_3:9154250-9154269 None:intergenic 50.0%
CTTCTCTTTCTTCTCCGTGC+GGG - chr4_3:9154338-9154357 Msa0628470:CDS 50.0%
GTGGATAGTGTATACCCGCA+CGG + chr4_3:9154355-9154374 None:intergenic 50.0%
AAAGGCCCAATCATGAGGTG+TGG + chr4_3:9154374-9154393 None:intergenic 50.0%
TCTAACATATGGCGGCACCA+TGG - chr4_3:9154416-9154435 Msa0628470:CDS 50.0%
CGACCGTTTGTCTTCCACAA+TGG - chr4_3:9154472-9154491 Msa0628470:CDS 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + chr4_3:9155000-9155019 None:intergenic 50.0%
GTCGCAATTTAGGTGACTGG+AGG - chr4_3:9155074-9155093 Msa0628470:CDS 50.0%
GCAATTTAGGTGACTGGAGG+CGG - chr4_3:9155077-9155096 Msa0628470:CDS 50.0%
CCAGTTTCCTTTCCCTAAGG+CGG - chr4_3:9155855-9155874 Msa0628470:CDS 50.0%
GGAGCTCCCAATAAGCTTCT+TGG - chr4_3:9156263-9156282 Msa0628470:CDS 50.0%
GGACCCCACATTAAATGGTG+GGG - chr4_3:9156554-9156573 Msa0628470:CDS 50.0%
AGGCCCCACCATTTAATGTG+GGG + chr4_3:9156560-9156579 None:intergenic 50.0%
GTAGGCCCCACCATTTAATG+TGG + chr4_3:9156562-9156581 None:intergenic 50.0%
ATCGCCGTCTCTGGTTAACT+TGG - chr4_3:9156613-9156632 Msa0628470:CDS 50.0%
! CTTTGCAGGCTTTTCCCTGA+TGG - chr4_3:9157179-9157198 Msa0628470:CDS 50.0%
GAGACACTTTCTCCTCCATC+AGG + chr4_3:9157197-9157216 None:intergenic 50.0%
GTAGCATACTCCACCTCCAT+CGG - chr4_3:9157806-9157825 Msa0628470:five_prime_UTR 50.0%
GATTGTTTCATCTCCGCCGA+TGG + chr4_3:9157825-9157844 None:intergenic 50.0%
!! AGTTGGTCGTTTTGGTGGCT+CGG + chr4_3:9158079-9158098 None:intergenic 50.0%
!! CTTGGAGTTGGTCGTTTTGG+TGG + chr4_3:9158084-9158103 None:intergenic 50.0%
ATCCTATCAGCTACCGTCGC+CGG + chr4_3:9149032-9149051 None:intergenic 55.0%
GAAGGAACCACATCACTCGG+TGG - chr4_3:9149499-9149518 Msa0628470:three_prime_UTR 55.0%
! AGGAACCACATCACTCGGTG+GGG - chr4_3:9149501-9149520 Msa0628470:three_prime_UTR 55.0%
GGAGGATGAAGCAAACCGTG+TGG - chr4_3:9150373-9150392 Msa0628470:intron 55.0%
GGATGAAGCAAACCGTGTGG+AGG - chr4_3:9150376-9150395 Msa0628470:intron 55.0%
CCGTGTGGAGGGAAACGTAA+AGG - chr4_3:9150388-9150407 Msa0628470:intron 55.0%
GGTGGCAATGAAGGGAGTCT+TGG - chr4_3:9150929-9150948 Msa0628470:intron 55.0%
GCTGAACCAAGCACATCCTC+TGG + chr4_3:9151796-9151815 None:intergenic 55.0%
ACGAGTCCAGCCATTCCACT+GGG - chr4_3:9152007-9152026 Msa0628470:intron 55.0%
CAGAAACCCAGTGGAATGGC+TGG + chr4_3:9152016-9152035 None:intergenic 55.0%
CAGCCATTCCACTGGGTTTC+TGG - chr4_3:9152014-9152033 Msa0628470:intron 55.0%
! GCTGGTTCTTCCGCTTCTTC+TGG - chr4_3:9152213-9152232 Msa0628470:intron 55.0%
! TCCGCTTCTTCTGGGAGATC+AGG - chr4_3:9152222-9152241 Msa0628470:intron 55.0%
TGAGACATGGCATTCTGGGC+AGG - chr4_3:9152275-9152294 Msa0628470:intron 55.0%
CACCTCATATGCTGCTGGAG+AGG - chr4_3:9152485-9152504 Msa0628470:intron 55.0%
!! GGTGCTGTTCTTGTGCAGCA+TGG - chr4_3:9152903-9152922 Msa0628470:intron 55.0%
CACCCATGGCCACATTGTGA+AGG - chr4_3:9154071-9154090 Msa0628470:intron 55.0%
GGCCACATTGTGAAGGATGG+TGG - chr4_3:9154078-9154097 Msa0628470:intron 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG + chr4_3:9155017-9155036 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr4_3:9155041-9155060 Msa0628470:CDS 55.0%
CCGCCTTAGGGAAAGGAAAC+TGG + chr4_3:9155858-9155877 None:intergenic 55.0%
TTCTTGGAGCTGATGGCAGC+TGG - chr4_3:9156279-9156298 Msa0628470:CDS 55.0%
TCTTGGAGCTGATGGCAGCT+GGG - chr4_3:9156280-9156299 Msa0628470:CDS 55.0%
! TGCAGGCTTTTCCCTGATGG+AGG - chr4_3:9157182-9157201 Msa0628470:CDS 55.0%
TTCGGATGGAACGGGTGAAC+TGG + chr4_3:9157245-9157264 None:intergenic 55.0%
TGTTTCATCTCCGCCGATGG+AGG + chr4_3:9157822-9157841 None:intergenic 55.0%
!! GGCTCGGTGAGATCTGGTAA+TGG + chr4_3:9158063-9158082 None:intergenic 55.0%
!! TTTGGTGGCTCGGTGAGATC+TGG + chr4_3:9158069-9158088 None:intergenic 55.0%
CCAAATCGCAATCCCGGCGA+CGG - chr4_3:9149016-9149035 Msa0628470:three_prime_UTR 60.0%
TCCTATCAGCTACCGTCGCC+GGG + chr4_3:9149031-9149050 None:intergenic 60.0%
!! CGGCGCCGATCTCAAACTTC+CGG + chr4_3:9149119-9149138 None:intergenic 60.0%
TGTCGACGACCCCAAGTCAC+AGG + chr4_3:9149256-9149275 None:intergenic 60.0%
! AACCACATCACTCGGTGGGG+TGG - chr4_3:9149504-9149523 Msa0628470:three_prime_UTR 60.0%
! ACCACATCACTCGGTGGGGT+GGG - chr4_3:9149505-9149524 Msa0628470:intron 60.0%
GCTGACCGAGGGAACCTTTC+AGG - chr4_3:9150526-9150545 Msa0628470:intron 60.0%
CACGAGTCCAGCCATTCCAC+TGG - chr4_3:9152006-9152025 Msa0628470:intron 60.0%
CGCCCAGAAACCCAGTGGAA+TGG + chr4_3:9152020-9152039 None:intergenic 60.0%
TTTGGCGCCCAGAAACCCAG+TGG + chr4_3:9152025-9152044 None:intergenic 60.0%
! ACTGGGTTTCTGGGCGCCAA+AGG - chr4_3:9152024-9152043 Msa0628470:intron 60.0%
CTCCACAGCTCACGCAGAGA+TGG - chr4_3:9153051-9153070 Msa0628470:intron 60.0%
GACCATCTCTGCGTGAGCTG+TGG + chr4_3:9153056-9153075 None:intergenic 60.0%
CAGTCAGGGCGGTGCAATGT+TGG - chr4_3:9154026-9154045 Msa0628470:intron 60.0%
!! CTCTGGTAGGGGCATTGCTC+TGG + chr4_3:9154187-9154206 None:intergenic 60.0%
CAGAGCAATGCCCCTACCAG+AGG - chr4_3:9154185-9154204 Msa0628470:CDS 60.0%
CTGGAGGCGGACCGCTATTA+AGG - chr4_3:9155090-9155109 Msa0628470:CDS 60.0%
GAGGCGGACCGCTATTAAGG+CGG - chr4_3:9155093-9155112 Msa0628470:CDS 60.0%
GAACCCTGTGCAATGTGCGC+TGG - chr4_3:9156203-9156222 Msa0628470:CDS 60.0%
GCACCAGCGCACATTGCACA+GGG + chr4_3:9156209-9156228 None:intergenic 60.0%
!! GTGCGCTGGTGCCATTCTTC+AGG - chr4_3:9156217-9156236 Msa0628470:CDS 60.0%
GAGCTGATGGCAGCTGGGTT+AGG - chr4_3:9156285-9156304 Msa0628470:CDS 60.0%
AACGGGTGAACTGGTGCAGG+AGG + chr4_3:9157236-9157255 None:intergenic 60.0%
TGGAACGGGTGAACTGGTGC+AGG + chr4_3:9157239-9157258 None:intergenic 60.0%
GCATACTCCACCTCCATCGG+CGG - chr4_3:9157809-9157828 Msa0628470:five_prime_UTR 60.0%
TTCATCTCCGCCGATGGAGG+TGG + chr4_3:9157819-9157838 None:intergenic 60.0%
CCGTCGCCGGGATTGCGATT+TGG + chr4_3:9149019-9149038 None:intergenic 65.0%
TCCCGGCGACGGTAGCTGAT+AGG - chr4_3:9149027-9149046 Msa0628470:three_prime_UTR 65.0%
TCCCACCCCACCGAGTGATG+TGG + chr4_3:9149509-9149528 None:intergenic 65.0%
! GCATTCTGGGCAGGAGCGTG+AGG - chr4_3:9152284-9152303 Msa0628470:intron 65.0%
! GGGCAGGAGCGTGAGGAAAC+TGG - chr4_3:9152291-9152310 Msa0628470:intron 65.0%
GGCACCAGCGCACATTGCAC+AGG + chr4_3:9156210-9156229 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 9148993 9158256 9148993 ID=Msa0628470;Name=Msa0628470
chr4_3 mRNA 9148993 9158256 9148993 ID=Msa0628470-mRNA-1;Parent=Msa0628470;Name=Msa0628470-mRNA-1;_AED=0.02;_eAED=0.02;_QI=302|1|1|1|0.6|0.33|6|539|1291
chr4_3 exon 9148993 9149523 9148993 ID=Msa0628470-mRNA-1:exon:2725;Parent=Msa0628470-mRNA-1
chr4_3 exon 9149805 9150062 9149805 ID=Msa0628470-mRNA-1:exon:2724;Parent=Msa0628470-mRNA-1
chr4_3 exon 9150943 9151070 9150943 ID=Msa0628470-mRNA-1:exon:2723;Parent=Msa0628470-mRNA-1
chr4_3 exon 9154129 9154216 9154129 ID=Msa0628470-mRNA-1:exon:2722;Parent=Msa0628470-mRNA-1
chr4_3 exon 9154297 9157856 9154297 ID=Msa0628470-mRNA-1:exon:2721;Parent=Msa0628470-mRNA-1
chr4_3 exon 9158105 9158256 9158105 ID=Msa0628470-mRNA-1:exon:2720;Parent=Msa0628470-mRNA-1
chr4_3 five_prime_UTR 9158105 9158256 9158105 ID=Msa0628470-mRNA-1:five_prime_utr;Parent=Msa0628470-mRNA-1
chr4_3 five_prime_UTR 9157707 9157856 9157707 ID=Msa0628470-mRNA-1:five_prime_utr;Parent=Msa0628470-mRNA-1
chr4_3 CDS 9154297 9157706 9154297 ID=Msa0628470-mRNA-1:cds;Parent=Msa0628470-mRNA-1
chr4_3 CDS 9154129 9154216 9154129 ID=Msa0628470-mRNA-1:cds;Parent=Msa0628470-mRNA-1
chr4_3 CDS 9150943 9151070 9150943 ID=Msa0628470-mRNA-1:cds;Parent=Msa0628470-mRNA-1
chr4_3 CDS 9149813 9150062 9149813 ID=Msa0628470-mRNA-1:cds;Parent=Msa0628470-mRNA-1
chr4_3 three_prime_UTR 9149805 9149812 9149805 ID=Msa0628470-mRNA-1:three_prime_utr;Parent=Msa0628470-mRNA-1
chr4_3 three_prime_UTR 9148993 9149523 9148993 ID=Msa0628470-mRNA-1:three_prime_utr;Parent=Msa0628470-mRNA-1
Gene Sequence

>Msa0628470

ATGTACAACGCGTATTTTTCTTCAACCATATATGGTGTCAGCTGCAAAGAATCGTTCCCTTTATCTTTCAATGGCTACTCAAATCTATGGTACGAAAGATTTGACAGGACCTTGTCACAGTGTTTGTCATGCCGTGGTTGTTGTGACTGTTGTGCTCTCTCCACCTATAGAGTACCCGTAAAGCCTTGTCTTCTAAATGGGTTGAGGCAGTCCACTCTTCTTCAATTGTCAGCAACTAGGAGGTTTATTTTCAGAGGTGAAAACCTGTACTGTTCTCGAGTTCCTTATGGTCTTGTTAGAGGTTCTTGTGAGCTTAAGTGCTCTACCAATGAAAGAAATGTTTGCAATACAAGTAGAAGAAGCAGAATAAAGGAAAGATGTGTTTGCTCAGCCTCACAGAAAGGGAGAGAAAGAGAAGATTTCCCTTCATTTGCTTCTGATGAATCTGAATTAGTTCTCAGCTTTTTGAGTGAGGAAGTAGATAAAGATGCTACATGTACCAAATCGAAGAATGTGTCTTCGTCCAACAGAACGGAAGCCAAGAAGAAGATAAATAATTTGAGTAGAGAGAGACATTTCAATTTGAGTGAGAAAACAAAAACAAAGAAAAAGGGAAATTTGAAGCAACATGAAGTATCCTCCATAGACTTGAGAAGAGAATGCAAAATAAATGACACTGAAAAGGAAGCCTTTACAAAAGGTGAAAACTGTAAGAAACAGAGAGATATGTCTAGCTGTTCATCTTATTACACACTCTCGTCCGGAGATTTTGAGAGTGACATGGAAGTGCAGCATAATATGGGTTTGGAAGAATTTTCACTGGGATATGAGGAGGATGAAGCAAACCGTGTGGAGGGAAACGTAAAGGAAGAATTCAACAGGCAAAGAGTTGACCAAAAGAAGGCGCACGACGTTTCAAATAAAGAAAGAATTGTACTTGGTGCAGATATTGATTGGAATATAAGAAAGAAGTCCGAAAAAATGCTGACCGAGGGAACCTTTCAGGAAACTGATACCACAAGAGAGAACCAATATATGCATCGAAAAGGATCTACAATGCATGAATCTGGTTATGGAAAAGCTTCTATTTCACAGGAGCAAGTCCATAGTGAGGAAGATAATTCATCTTTCGTAGAACATTTGGATAAGAAAACAAACAAGGCATACATTCAAACAGGAAACAGAAGAAAGAATCAATCTTCATATGCACAAGAGTCTGGTCGCGATGAAATTGAGACAACTTTATTATCAGGAAAAAGATTCAGTGGCAGTGAAGAGAACCTTGAAATATCCAACTCATCTAAGAAAACAAGTGACAAACATGAAAAGTTTGTTGGTTCTACTTCTACCACCGGAACGGAAAGTTTGAAATCAAAGAAAACATTTGGTGGCAATGAAGGGAGTCTTGGGATATCAGAAACACGTTTGCAGGAAAGAAGCGATAAACATAAAAAATTTATTGGTTCTAATTCTACCACAACAGAGGATGTAATAGAGAGAAGCTCCCAAAATTATATAGGAAATTTTAAAATCGAAGACTCTGAAAGGACCTCTGATACTAGGATGAAGAACATGGGAGAGAAAAAGAATTCGGTTTTGAGTTCTGCTCAGGGAGTGGAGTTGCAACACCGTAAAGGAGAGAAGACCATTGCACATGATAAAGACAGAAGAAAATCCCAACTGTTTTCTGAAGTATCACAAGTTCATGGGAGTCATGTTGAAGATACATCTATCCCGATGTCTAAAACTAGTGTGAAGAACCAGGAAGAAATATCATACTTAAGTTCACATGAAAGGGATACACGACTCCAAACTGATAGGAGGAGAACTCAGAGTGCTCAACATAGCAAAGGATATGAACATGTCAGCACTTTACCGGAAGGCTTTGACAGTGACGAAAAGCAAGTCTCAAGTTCTCAAATAACTTCTGAGAAAATGAGACTTATGCCAAAAAGTAAATCGGCATCAGCTGTTAAAACTAGAGAAAGTTCTTCCCAAACTGAAGAAAGGATTTTTGAATTTGCTAATGACCACCAAAGATCTAGGAACCCTTCTTCCCAAATGGGTAGAGTTTCAGCTCATGTTGAACAAACTGCTGGGTTTGAAAGCCCTGATATCTACCTTGAAGCTTCAGAAAGTGGCTCTTCTGCTTTGTATGCCAATTCCGGAAGAAGTCCTGCTATGTTTTCAGGATCACATTCCCAATATGAAAGTGATAAGTCATATAGTGAACCTTCTATTTTCATGACTCCAGAGGATGTGCTTGGTTCAGCTAGTCGTTTTGAGGAATCATCAAAACAGTTTGTTGATGAGTTTGTGGAGAGGGTCAGGCATGAAGTCACAACTTCAGAAAGACAACAAGAGATAGAAGTTACTGGAACAAAGTTGGCCTCTGATGTTGAGGATAATCAGATGAACAGTTCAAGGCAACAAGGCACTCAAAATGACTCTCAGTCAAAGAGTCACGAGTCCAGCCATTCCACTGGGTTTCTGGGCGCCAAAGGAATTTCTGACGAAATGTGGGATGTAAAAGAACCATCTGTTGGGCATGGTCTATCATCTGAAGAACCAGAGATCAACAATGAAACTGCAAAACCAATTGTTAAAAGAACAGGAAGGTCCATGTGGGGTATGCTTTCTGATATTGTTCAATTACGTTGGAGTTCACGTGCTGGTTCTTCCGCTTCTTCTGGGAGATCAGGTGACAGAAACTCACCAAACAAATCTGACAGTGAGACATGGCATTCTGGGCAGGAGCGTGAGGAAACTGGTAAAAGTGTGCTACCACAAGCCATGACTTCTGATAAATCAAAACCAGGTACTCATTATACCCAAAGTGAGGGAGATGTGTCTGACACTAAAATATTGAAGGACAAAGGAAAACATATTGAAGTTGGATCATCTTCTCCAAATAAATTGGAGAGTGGATCAACATCAATAGGCACCTCATATGCTGCTGGAGAGGAATTTTCTAGTCGAACTGAAAATGAAAAAGATTTGAAAGTCACTACTTCTGGCTTAAAAAAAATGGAGTCACCAAATCCATTATCTATTAGAGGGCAACCTATTGCAGCAGAAATCGTAAATATCGGTGGATCTGACATTTCCAGAACTGAATCAGTGATGCCGATAAAAGAACCCGTTGCTCCAGTGAAGACTGAAATGTCTGGCTCAGACAGAAAAGATGGAGAGTTGAAACAACGGAAGTTTCAGCGGAAAAGTCAGGTTTCAAGAGATAGGTTTGATGACTGGGAAGAAGCCTATAATGTTGAACTTGAGCAGCGACGAACTGATGAATTGTTCATGAAGGAAGCACTTTTGGAAGCCAGAAAGGCCGGTGATATTTGGGAGGTCCCTGTTGGTGCTGTTCTTGTGCAGCATGGAAAAATTATTGCAAGAGGATGCAACTTAGTAGAAGAGTTACGGGACTCCACAGCTCACGCAGAGATGGTCTGTATACGAGAAGCTTCAAAACATCTCAACTCATGGAGACTATCAGAAACTACACTTTATGTAACGCTTGAACCCTGTGCAATGTGCGCTGGTGCCATTCTTCAGGCAAGAGTAGATACTGTTGTGTGGGGAGCTCCCAATAAGCTTCTTGGAGCTGATGGCAGCTGGGTTAGGCTTTTCCCTGATGGAGGAGAAAGTGTCTCAGAAGCAAGGGATATACCTCCTGCACCAGTTCACCCGTTCCATCCGAAAATAAAAATAAGAAGAGGAGTATTGGCGACAGAGTGCGCAGATGTAATGCAGCAATTTTTTCAACTGAGAAGGCGAAAGAAGAAAGAAGATCCACTTCCTATTACTACCCATCATCCTTCCAAGTTACTCAATAAGATACAAGACATCTTTCATGTAATGTTCTGTTTGTAA
Protein sequence

>Msa0628470

MYNAYFSSTIYGVSCKESFPLSFNGYSNLWYERFDRTLSQCLSCRGCCDCCALSTYRVPVKPCLLNGLRQSTLLQLSATRRFIFRGENLYCSRVPYGLVRGSCELKCSTNERNVCNTSRRSRIKERCVCSASQKGREREDFPSFASDESELVLSFLSEEVDKDATCTKSKNVSSSNRTEAKKKINNLSRERHFNLSEKTKTKKKGNLKQHEVSSIDLRRECKINDTEKEAFTKGENCKKQRDMSSCSSYYTLSSGDFESDMEVQHNMGLEEFSLGYEEDEANRVEGNVKEEFNRQRVDQKKAHDVSNKERIVLGADIDWNIRKKSEKMLTEGTFQETDTTRENQYMHRKGSTMHESGYGKASISQEQVHSEEDNSSFVEHLDKKTNKAYIQTGNRRKNQSSYAQESGRDEIETTLLSGKRFSGSEENLEISNSSKKTSDKHEKFVGSTSTTGTESLKSKKTFGGNEGSLGISETRLQERSDKHKKFIGSNSTTTEDVIERSSQNYIGNFKIEDSERTSDTRMKNMGEKKNSVLSSAQGVELQHRKGEKTIAHDKDRRKSQLFSEVSQVHGSHVEDTSIPMSKTSVKNQEEISYLSSHERDTRLQTDRRRTQSAQHSKGYEHVSTLPEGFDSDEKQVSSSQITSEKMRLMPKSKSASAVKTRESSSQTEERIFEFANDHQRSRNPSSQMGRVSAHVEQTAGFESPDIYLEASESGSSALYANSGRSPAMFSGSHSQYESDKSYSEPSIFMTPEDVLGSASRFEESSKQFVDEFVERVRHEVTTSERQQEIEVTGTKLASDVEDNQMNSSRQQGTQNDSQSKSHESSHSTGFLGAKGISDEMWDVKEPSVGHGLSSEEPEINNETAKPIVKRTGRSMWGMLSDIVQLRWSSRAGSSASSGRSGDRNSPNKSDSETWHSGQEREETGKSVLPQAMTSDKSKPGTHYTQSEGDVSDTKILKDKGKHIEVGSSSPNKLESGSTSIGTSYAAGEEFSSRTENEKDLKVTTSGLKKMESPNPLSIRGQPIAAEIVNIGGSDISRTESVMPIKEPVAPVKTEMSGSDRKDGELKQRKFQRKSQVSRDRFDDWEEAYNVELEQRRTDELFMKEALLEARKAGDIWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMVCIREASKHLNSWRLSETTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPDGGESVSEARDIPPAPVHPFHPKIKIRRGVLATECADVMQQFFQLRRRKKKEDPLPITTHHPSKLLNKIQDIFHVMFCL*