Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636450 | XP_039689391.1 | 96.321 | 299 | 7 | 1 | 3 | 297 | 1 | 299 | 0.0 | 593 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636450 | sp|Q7UBC5|DUSA_SHIFL | 52.174 | 230 | 101 | 4 | 71 | 296 | 22 | 246 | 7.75e-73 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636450 | A0A072UJ85 | 96.321 | 299 | 7 | 1 | 3 | 297 | 1 | 299 | 0.0 | 593 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015220 | Msa0636450 | 0.817321 | 3.503221e-52 | -8.615850e-47 |
| Msa0022960 | Msa0636450 | 0.814355 | 1.607360e-51 | -8.615850e-47 |
| Msa0037040 | Msa0636450 | 0.808673 | 2.759341e-50 | -8.615850e-47 |
| Msa0630090 | Msa0636450 | 0.849192 | 3.786757e-60 | -8.615850e-47 |
| Msa0636450 | Msa0636840 | 0.801692 | 7.985924e-49 | -8.615850e-47 |
| Msa0636450 | Msa0729120 | 0.801144 | 1.034117e-48 | -8.615850e-47 |
| Msa0636450 | Msa0762480 | 0.807139 | 5.849557e-50 | -8.615850e-47 |
| Msa0636450 | Msa0805000 | 0.824548 | 7.606019e-54 | -8.615850e-47 |
| Msa0636450 | Msa0805030 | 0.833971 | 3.925271e-56 | -8.615850e-47 |
| Msa0636450 | Msa0866310 | 0.803066 | 4.161571e-49 | -8.615850e-47 |
| Msa0636450 | Msa0964570 | 0.809794 | 1.586527e-50 | -8.615850e-47 |
| Msa0636450 | Msa1032790 | 0.804669 | 1.933704e-49 | -8.615850e-47 |
| Msa0636450 | Msa1045860 | 0.810405 | 1.171823e-50 | -8.615850e-47 |
| Msa0636450 | Msa1045950 | 0.806737 | 7.113825e-50 | -8.615850e-47 |
| Msa0636450 | Msa1087410 | 0.820433 | 6.878979e-53 | -8.615850e-47 |
| Msa0636450 | Msa1121580 | 0.810371 | 1.191699e-50 | -8.615850e-47 |
| Msa0636450 | Msa1156270 | 0.808819 | 2.567872e-50 | -8.615850e-47 |
| Msa0636450 | Msa1182530 | 0.805634 | 1.214400e-49 | -8.615850e-47 |
| Msa0636450 | Msa1182960 | 0.802844 | 4.626937e-49 | -8.615850e-47 |
| Msa0636450 | Msa1350350 | 0.806050 | 9.927505e-50 | -8.615850e-47 |
| Msa0636450 | Msa1373310 | 0.820969 | 5.179627e-53 | -8.615850e-47 |
| Msa0317630 | Msa0636450 | 0.800913 | 1.153253e-48 | -8.615850e-47 |
| Msa0508770 | Msa0636450 | 0.807745 | 4.349954e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636450 | MtrunA17_Chr4g0019301 | 96.321 | 299 | 7 | 1 | 3 | 297 | 1 | 299 | 0.0 | 593 |
| Msa0636450 | MtrunA17_Chr3g0089171 | 83.122 | 237 | 36 | 1 | 65 | 297 | 5 | 241 | 3.11e-148 | 421 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0636450 | AT3G63510.1 | 80.426 | 235 | 42 | 1 | 66 | 296 | 49 | 283 | 1.26e-142 | 408 |
| Msa0636450 | AT5G47970.3 | 76.250 | 240 | 53 | 1 | 62 | 297 | 3 | 242 | 2.06e-138 | 392 |
| Msa0636450 | AT5G47970.1 | 75.934 | 241 | 54 | 1 | 61 | 297 | 2 | 242 | 1.19e-136 | 392 |
| Msa0636450 | AT5G47970.2 | 75.934 | 241 | 54 | 1 | 61 | 297 | 2 | 242 | 1.19e-136 | 392 |
| Msa0636450 | AT3G63510.2 | 79.186 | 221 | 42 | 1 | 80 | 296 | 30 | 250 | 8.03e-131 | 377 |
| Msa0636450 | AT5G67220.1 | 28.977 | 176 | 109 | 7 | 46 | 212 | 66 | 234 | 1.49e-11 | 65.1 |
Find 78 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCATGATGCTTTGTTAAA+AGG | 0.149028 | 4_3:+26623576 | Msa0636450:five_prime_UTR |
| CTGATGAAATTTGAACTTAA+AGG | 0.153849 | 4_3:-26623645 | None:intergenic |
| GATTTAACGTTTACAATAAA+TGG | 0.162079 | 4_3:+26626656 | Msa0636450:CDS |
| CATCCCATTGTGCTTCAAAT+TGG | 0.244974 | 4_3:+26624787 | Msa0636450:CDS |
| AATATCTACCTCCTTGGTTT+AGG | 0.295450 | 4_3:+26623793 | Msa0636450:CDS |
| TTTATTGTAAACGTTAAATC+TGG | 0.301875 | 4_3:-26626653 | None:intergenic |
| AATCTGGAAAGTCACGTAAA+AGG | 0.320796 | 4_3:-26626637 | None:intergenic |
| GCATTAGCCCAGCTGAAAAT+AGG | 0.338887 | 4_3:+26626446 | Msa0636450:CDS |
| CCCATGATGCTTTGTTAAAA+GGG | 0.341152 | 4_3:+26623577 | Msa0636450:five_prime_UTR |
| ACTTGCTTCGGCGCCGGGTT+CGG | 0.342025 | 4_3:-26623336 | None:intergenic |
| TGTTCATCAAAAGGATAATC+TGG | 0.369652 | 4_3:+26624434 | Msa0636450:CDS |
| ACTGGACAGACAATCATTAT+AGG | 0.371489 | 4_3:+26624346 | Msa0636450:CDS |
| TGAGCAGTGCCTTCCTTGAA+TGG | 0.371548 | 4_3:-26626420 | None:intergenic |
| AAGCACAATGGGATGTTGTT+CGG | 0.380793 | 4_3:-26624779 | None:intergenic |
| AGCACAATGGGATGTTGTTC+GGG | 0.381532 | 4_3:-26624778 | None:intergenic |
| GTCAATGCAGCACGAGATGC+TGG | 0.386373 | 4_3:+26626856 | Msa0636450:CDS |
| TTGAACTGCATAAATTTCTC+TGG | 0.408550 | 4_3:-26623716 | None:intergenic |
| TGGAAACTTGCTTCGGCGCC+GGG | 0.415299 | 4_3:-26623341 | None:intergenic |
| TTTACTTCAACATACCTTAG+TGG | 0.424412 | 4_3:-26626478 | None:intergenic |
| ATCTGGAAAGTCACGTAAAA+GGG | 0.434720 | 4_3:-26626636 | None:intergenic |
| CATTCAACAAGCAAGCAAAC+AGG | 0.435191 | 4_3:+26623258 | Msa0636450:five_prime_UTR |
| GACCCATGTCCAGCTACTCT+TGG | 0.435847 | 4_3:-26624990 | None:intergenic |
| GTAGCTGGACATGGGTCCTT+TGG | 0.436150 | 4_3:+26624996 | Msa0636450:CDS |
| AGCATTTCATAATCCATTCA+AGG | 0.439301 | 4_3:+26626407 | Msa0636450:CDS |
| TGTCCAGCTACTCTTGGACT+TGG | 0.439456 | 4_3:-26624984 | None:intergenic |
| ATGGAAACTTGCTTCGGCGC+CGG | 0.452590 | 4_3:-26623342 | None:intergenic |
| AGAAACAATTGTTCATCAAA+AGG | 0.455079 | 4_3:+26624425 | Msa0636450:CDS |
| CCTCCAATTTGAAGCACAAT+GGG | 0.455731 | 4_3:-26624790 | None:intergenic |
| GGGGCGCATGGTGTTATGAT+TGG | 0.468266 | 4_3:+26626877 | Msa0636450:CDS |
| TAGTTGTAGTCGTAGATTAC+CGG | 0.468758 | 4_3:+26623674 | Msa0636450:CDS |
| GCCTCATTTCAAAGCATGCT+TGG | 0.470427 | 4_3:+26624379 | Msa0636450:CDS |
| AATAGAGTTTACTTGAAGGA+TGG | 0.473187 | 4_3:-26623361 | None:intergenic |
| GTAAACAATATCTACCTCCT+TGG | 0.476668 | 4_3:+26623787 | Msa0636450:CDS |
| CCCATTGTGCTTCAAATTGG+AGG | 0.477496 | 4_3:+26624790 | Msa0636450:CDS |
| TGCCCAAGTCCAAGAGTAGC+TGG | 0.480300 | 4_3:+26624981 | Msa0636450:CDS |
| GTCCAGCTACTCTTGGACTT+GGG | 0.484487 | 4_3:-26624983 | None:intergenic |
| GTTGCTTTATTTCAGGAACC+AGG | 0.486401 | 4_3:+26626974 | Msa0636450:three_prime_UTR |
| GTCAGTGTCAAATGTCGAAT+TGG | 0.488293 | 4_3:+26625200 | Msa0636450:CDS |
| TTGTCTGTCCAGTCCATCAT+TGG | 0.490989 | 4_3:-26624336 | None:intergenic |
| TATGATAAACACGGTGTGCT+TGG | 0.495563 | 4_3:+26623765 | Msa0636450:CDS |
| TGAAGGATGGAAACTTGCTT+CGG | 0.507022 | 4_3:-26623348 | None:intergenic |
| GCACGAGATGCTGGGGCGCA+TGG | 0.510144 | 4_3:+26626865 | Msa0636450:CDS |
| ATCGGCGAACTGTGAATTGA+CGG | 0.519895 | 4_3:+26623289 | Msa0636450:five_prime_UTR |
| TCAATGCAGCACGAGATGCT+GGG | 0.520088 | 4_3:+26626857 | Msa0636450:CDS |
| ATGGATTATGAAATGCTTAG+TGG | 0.521363 | 4_3:-26626401 | None:intergenic |
| ACGTCTTATGCTTGATCCAA+AGG | 0.523686 | 4_3:+26625022 | Msa0636450:CDS |
| TCCAGGTGAATTCATATCCA+CGG | 0.531274 | 4_3:+26626363 | Msa0636450:intron |
| AGCAAACAGGGTGATACAAT+CGG | 0.536711 | 4_3:+26623271 | Msa0636450:five_prime_UTR |
| GCCAAGCATGCTTTGAAATG+AGG | 0.539513 | 4_3:-26624380 | None:intergenic |
| ATTCGACATTTGACACTGAC+AGG | 0.541211 | 4_3:-26625197 | None:intergenic |
| TCTCCTTCTCAATCCGAACC+CGG | 0.546860 | 4_3:+26623323 | Msa0636450:five_prime_UTR |
| TCAAGGAAGGCACTGCTCAA+TGG | 0.553455 | 4_3:+26626424 | Msa0636450:CDS |
| AAAATTGCATGGTCAAAAGA+GGG | 0.554401 | 4_3:-26626939 | None:intergenic |
| TTTAACAAAGCATCATGGGT+TGG | 0.556778 | 4_3:-26623573 | None:intergenic |
| CCCTCCAATTTGAAGCACAA+TGG | 0.559463 | 4_3:-26624791 | None:intergenic |
| AGTCCAAGAGTAGCTGGACA+TGG | 0.565210 | 4_3:+26624987 | Msa0636450:CDS |
| CCATTGTGCTTCAAATTGGA+GGG | 0.565278 | 4_3:+26624791 | Msa0636450:CDS |
| GTGTCGCTCCAATGATGGAC+TGG | 0.566818 | 4_3:+26624328 | Msa0636450:intron |
| TTTCATAATCCATTCAAGGA+AGG | 0.571399 | 4_3:+26626411 | Msa0636450:CDS |
| ATAGGAGTATTCCTCCACTA+AGG | 0.577660 | 4_3:+26626464 | Msa0636450:CDS |
| CAATGCAGCACGAGATGCTG+GGG | 0.580578 | 4_3:+26626858 | Msa0636450:CDS |
| TCGGCGAACTGTGAATTGAC+GGG | 0.583973 | 4_3:+26623290 | Msa0636450:five_prime_UTR |
| TTGCTTTATTTCAGGAACCA+GGG | 0.597401 | 4_3:+26626975 | Msa0636450:three_prime_UTR |
| TTAACGTTTACAATAAATGG+AGG | 0.597751 | 4_3:+26626659 | Msa0636450:CDS |
| GCGCCGGGTTCGGATTGAGA+AGG | 0.599951 | 4_3:-26623326 | None:intergenic |
| TGGATTATGAAATGCTTAGT+GGG | 0.605032 | 4_3:-26626400 | None:intergenic |
| ACTTCAACATACCTTAGTGG+AGG | 0.612180 | 4_3:-26626475 | None:intergenic |
| ATTCAACAAGCAAGCAAACA+GGG | 0.613479 | 4_3:+26623259 | Msa0636450:five_prime_UTR |
| TGAAATGCTAAGTAAAACCC+TGG | 0.626039 | 4_3:-26626992 | None:intergenic |
| GTCCAAGAGTAGCTGGACAT+GGG | 0.636881 | 4_3:+26624988 | Msa0636450:CDS |
| CAACAATCATATGATAAACA+CGG | 0.649621 | 4_3:+26623756 | Msa0636450:CDS |
| AAGCATAAGACGTACACCAA+AGG | 0.652427 | 4_3:-26625012 | None:intergenic |
| TGTCAAATGTCGAATTGGTG+TGG | 0.664761 | 4_3:+26625205 | Msa0636450:CDS |
| AAATTGCATGGTCAAAAGAG+GGG | 0.674327 | 4_3:-26626938 | None:intergenic |
| GGGTGATAAAGAAGAAACCG+TGG | 0.679450 | 4_3:-26626380 | None:intergenic |
| GATAGTACACACCTAAACCA+AGG | 0.688593 | 4_3:-26623804 | None:intergenic |
| AGGCATTACTAGTGTTGATG+AGG | 0.694116 | 4_3:+26626679 | Msa0636450:CDS |
| AGTACACACCTAAACCAAGG+AGG | 0.770843 | 4_3:-26623801 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTTTATAAAATGAG+AGG | - | chr4_3:26625334-26625353 | None:intergenic | 10.0% |
| !! | AACATATATATATCATTATA+TGG | - | chr4_3:26625379-26625398 | None:intergenic | 10.0% |
| !! | TCTTCTATAATAATAATATT+TGG | + | chr4_3:26626299-26626318 | Msa0636450:intron | 10.0% |
| !! | GAAAAAATTGAATTGAAAAA+GGG | - | chr4_3:26623453-26623472 | None:intergenic | 15.0% |
| !! | AGAAAAAATTGAATTGAAAA+AGG | - | chr4_3:26623454-26623473 | None:intergenic | 15.0% |
| !! | TTAAAATATGGTTACAATAT+AGG | + | chr4_3:26624002-26624021 | Msa0636450:intron | 15.0% |
| !!! | TGAAGTTATTTTAATATGTA+CGG | + | chr4_3:26624121-26624140 | Msa0636450:intron | 15.0% |
| !!! | AGATTTTGAGATTAATAAAT+TGG | + | chr4_3:26625713-26625732 | Msa0636450:intron | 15.0% |
| !! | ATAATATATTCAATGAGTAA+TGG | - | chr4_3:26625935-26625954 | None:intergenic | 15.0% |
| !! | ATTACTCATTGAATATATTA+TGG | + | chr4_3:26625934-26625953 | Msa0636450:intron | 15.0% |
| !!! | AATCTAAGAGAAAATAATTT+TGG | + | chr4_3:26625987-26626006 | Msa0636450:intron | 15.0% |
| !! | TAATAATAATATTTGGATCA+TGG | + | chr4_3:26626306-26626325 | Msa0636450:intron | 15.0% |
| !!! | TAACTATTTCTTTTGATTGT+AGG | + | chr4_3:26623539-26623558 | Msa0636450:intron | 20.0% |
| !!! | TGCAGTTACTTTTTAAAATA+TGG | + | chr4_3:26623990-26624009 | Msa0636450:intron | 20.0% |
| !! | AATTTAATCTCTAACATTGT+AGG | - | chr4_3:26624214-26624233 | None:intergenic | 20.0% |
| !! | CACAAAAATGAAAGAATAAA+TGG | - | chr4_3:26624725-26624744 | None:intergenic | 20.0% |
| !! | AAAAGGCTATTCAATTTATT+AGG | + | chr4_3:26625473-26625492 | Msa0636450:intron | 20.0% |
| !! | ATTATTATCACAAAATCCAT+TGG | + | chr4_3:26625507-26625526 | Msa0636450:intron | 20.0% |
| !!! | TGTTTTCTTTAATACCTAAT+TGG | + | chr4_3:26625534-26625553 | Msa0636450:intron | 20.0% |
| !!! | TTTGAGATTAATAAATTGGA+CGG | + | chr4_3:26625717-26625736 | Msa0636450:intron | 20.0% |
| !!! | TAAGAGAAAATAATTTTGGT+AGG | + | chr4_3:26625991-26626010 | Msa0636450:intron | 20.0% |
| !! | ATTTATAAGATTACCACAAA+GGG | - | chr4_3:26626064-26626083 | None:intergenic | 20.0% |
| !! | AATTTATAAGATTACCACAA+AGG | - | chr4_3:26626065-26626084 | None:intergenic | 20.0% |
| !! | TTGTGGTAATCTTATAAATT+AGG | + | chr4_3:26626065-26626084 | Msa0636450:intron | 20.0% |
| !! | TTTATTGTAAACGTTAAATC+TGG | - | chr4_3:26626656-26626675 | None:intergenic | 20.0% |
| !! | GATTTAACGTTTACAATAAA+TGG | + | chr4_3:26626656-26626675 | Msa0636450:CDS | 20.0% |
| !! | CAAATATTTCAACAAATATC+AGG | - | chr4_3:26626742-26626761 | None:intergenic | 20.0% |
| !!! | CTGATATTTGTTGAAATATT+TGG | + | chr4_3:26626740-26626759 | Msa0636450:intron | 20.0% |
| !!! | TTTTTGTTTGAAAAATTGCA+TGG | - | chr4_3:26626953-26626972 | None:intergenic | 20.0% |
| ! | AGAAATAGTTACTTAAACTG+TGG | - | chr4_3:26623530-26623549 | None:intergenic | 25.0% |
| ! | CTGATGAAATTTGAACTTAA+AGG | - | chr4_3:26623648-26623667 | None:intergenic | 25.0% |
| ! | CAACAATCATATGATAAACA+CGG | + | chr4_3:26623756-26623775 | Msa0636450:CDS | 25.0% |
| !! | GTTGTCAATTTTCATATTCA+AGG | + | chr4_3:26624143-26624162 | Msa0636450:intron | 25.0% |
| ! | ATCAGTATATTTATAGCACA+AGG | - | chr4_3:26624264-26624283 | None:intergenic | 25.0% |
| ! | AGAAACAATTGTTCATCAAA+AGG | + | chr4_3:26624425-26624444 | Msa0636450:CDS | 25.0% |
| ! | AGAAAAAAAAAAGTCCTACA+CGG | - | chr4_3:26624571-26624590 | None:intergenic | 25.0% |
| ! | AATTGTTTATATCATAGCAG+TGG | + | chr4_3:26624613-26624632 | Msa0636450:intron | 25.0% |
| !!! | CTTTAAGATTTAACGTGATA+AGG | - | chr4_3:26624899-26624918 | None:intergenic | 25.0% |
| ! | TAATAAACATATATCAGCTG+TGG | + | chr4_3:26624957-26624976 | Msa0636450:intron | 25.0% |
| ! | AGAGAAATCTAATGTATACA+AGG | + | chr4_3:26625125-26625144 | Msa0636450:intron | 25.0% |
| ! | TTCTTATGATGAACTTTGTA+AGG | + | chr4_3:26625238-26625257 | Msa0636450:intron | 25.0% |
| !! | CTTTTAGATTGCATTCAAAA+AGG | + | chr4_3:26625456-26625475 | Msa0636450:intron | 25.0% |
| ! | TTAAAGAAAACAGAAACCAA+TGG | - | chr4_3:26625526-26625545 | None:intergenic | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr4_3:26625684-26625703 | None:intergenic | 25.0% |
| ! | TAATAAATTGGACGGAAATA+TGG | + | chr4_3:26625725-26625744 | Msa0636450:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr4_3:26625745-26625764 | Msa0636450:intron | 25.0% |
| ! | GGTTTATGATAGAACATTAT+GGG | + | chr4_3:26625746-26625765 | Msa0636450:intron | 25.0% |
| !! | TAATCTTTGTTTAGGAAATC+AGG | + | chr4_3:26625863-26625882 | Msa0636450:intron | 25.0% |
| ! | AGGATCAATATAGTATCATT+GGG | + | chr4_3:26625883-26625902 | Msa0636450:intron | 25.0% |
| ! | GATTTGTAACAATAGTAGAT+AGG | - | chr4_3:26626124-26626143 | None:intergenic | 25.0% |
| ! | CTATTGTTACAAATCGAAAT+TGG | + | chr4_3:26626129-26626148 | Msa0636450:intron | 25.0% |
| !! | TTTTCTATCCAATGTTACAT+GGG | + | chr4_3:26626170-26626189 | Msa0636450:intron | 25.0% |
| ! | TTACATGGGATTTAGTATTT+GGG | + | chr4_3:26626184-26626203 | Msa0636450:intron | 25.0% |
| ! | AAAGATCTAAATCACATCAT+TGG | - | chr4_3:26626269-26626288 | None:intergenic | 25.0% |
| ! | AATGATGTGATTTAGATCTT+TGG | + | chr4_3:26626268-26626287 | Msa0636450:intron | 25.0% |
| ! | AGGTATGTTGAAGTAAAATT+TGG | + | chr4_3:26626484-26626503 | Msa0636450:intron | 25.0% |
| ! | TTAACGTTTACAATAAATGG+AGG | + | chr4_3:26626659-26626678 | Msa0636450:CDS | 25.0% |
| ! | TAAGATAACAAATTTAGTGC+TGG | - | chr4_3:26626772-26626791 | None:intergenic | 25.0% |
| !!! | CAAAAAAGTTGCTTTATTTC+AGG | + | chr4_3:26626967-26626986 | Msa0636450:three_prime_UTR | 25.0% |
| AATAGAGTTTACTTGAAGGA+TGG | - | chr4_3:26623364-26623383 | None:intergenic | 30.0% | |
| GTAGAATAGAGTTTACTTGA+AGG | - | chr4_3:26623368-26623387 | None:intergenic | 30.0% | |
| ! | GGATGAAAATGAAGTTTTCA+GGG | + | chr4_3:26623598-26623617 | Msa0636450:exon | 30.0% |
| !! | GTTTTCAGGGTATTCAATTT+CGG | + | chr4_3:26623611-26623630 | Msa0636450:CDS | 30.0% |
| TTGAACTGCATAAATTTCTC+TGG | - | chr4_3:26623719-26623738 | None:intergenic | 30.0% | |
| ACTCTATTCTTATTGAACGT+CGG | - | chr4_3:26623966-26623985 | None:intergenic | 30.0% | |
| ! | GTGTTTTTCTCAGACAATAT+AGG | + | chr4_3:26624070-26624089 | Msa0636450:intron | 30.0% |
| ! | ACTGATTTCGCTATGAAATT+TGG | + | chr4_3:26624278-26624297 | Msa0636450:intron | 30.0% |
| !! | ATTTGGTCTTCTTTTTACGT+TGG | + | chr4_3:26624295-26624314 | Msa0636450:intron | 30.0% |
| TGTTCATCAAAAGGATAATC+TGG | + | chr4_3:26624434-26624453 | Msa0636450:CDS | 30.0% | |
| !! | AGCTTGTTAACGAAAATGAA+CGG | + | chr4_3:26624477-26624496 | Msa0636450:intron | 30.0% |
| !!! | ACTCCAATCATGATTTTTTG+TGG | + | chr4_3:26624535-26624554 | Msa0636450:intron | 30.0% |
| CTACCACAAAAAATCATGAT+TGG | - | chr4_3:26624541-26624560 | None:intergenic | 30.0% | |
| TGCTATTCAATTATCAAACG+TGG | + | chr4_3:26624680-26624699 | Msa0636450:intron | 30.0% | |
| GCTATTCAATTATCAAACGT+GGG | + | chr4_3:26624681-26624700 | Msa0636450:intron | 30.0% | |
| ! | CATTTTTGTGTATTTTGCTC+AGG | + | chr4_3:26624735-26624754 | Msa0636450:intron | 30.0% |
| TCAATATGACAACATGCAAT+TGG | + | chr4_3:26625064-26625083 | Msa0636450:intron | 30.0% | |
| !! | TATACAAGGAAAGTTTGTTG+CGG | + | chr4_3:26625139-26625158 | Msa0636450:intron | 30.0% |
| ACAACTAAGCTGTACTTAAA+TGG | + | chr4_3:26625426-26625445 | Msa0636450:intron | 30.0% | |
| TCTTTAATACCTAATTGGTG+TGG | + | chr4_3:26625539-26625558 | Msa0636450:intron | 30.0% | |
| CTTTAATACCTAATTGGTGT+GGG | + | chr4_3:26625540-26625559 | Msa0636450:intron | 30.0% | |
| TCTAATTGTAACATGCTGAT+AGG | + | chr4_3:26625834-26625853 | Msa0636450:intron | 30.0% | |
| ! | GGAGTTTGTAATCTTTGTTT+AGG | + | chr4_3:26625855-26625874 | Msa0636450:intron | 30.0% |
| CAGGATCAATATAGTATCAT+TGG | + | chr4_3:26625882-26625901 | Msa0636450:intron | 30.0% | |
| GGATCAATATAGTATCATTG+GGG | + | chr4_3:26625884-26625903 | Msa0636450:intron | 30.0% | |
| GATCAATATAGTATCATTGG+GGG | + | chr4_3:26625885-26625904 | Msa0636450:intron | 30.0% | |
| ! | CTTTTCTATCCAATGTTACA+TGG | + | chr4_3:26626169-26626188 | Msa0636450:intron | 30.0% |
| TACTAAATCCCATGTAACAT+TGG | - | chr4_3:26626181-26626200 | None:intergenic | 30.0% | |
| GTTACATGGGATTTAGTATT+TGG | + | chr4_3:26626183-26626202 | Msa0636450:intron | 30.0% | |
| AATATTTGGATCATGGTTTC+TGG | + | chr4_3:26626313-26626332 | Msa0636450:intron | 30.0% | |
| ATATTTGGATCATGGTTTCT+GGG | + | chr4_3:26626314-26626333 | Msa0636450:intron | 30.0% | |
| TGGATTATGAAATGCTTAGT+GGG | - | chr4_3:26626403-26626422 | None:intergenic | 30.0% | |
| ! | ATGGATTATGAAATGCTTAG+TGG | - | chr4_3:26626404-26626423 | None:intergenic | 30.0% |
| AGCATTTCATAATCCATTCA+AGG | + | chr4_3:26626407-26626426 | Msa0636450:CDS | 30.0% | |
| TTTCATAATCCATTCAAGGA+AGG | + | chr4_3:26626411-26626430 | Msa0636450:CDS | 30.0% | |
| TTTACTTCAACATACCTTAG+TGG | - | chr4_3:26626481-26626500 | None:intergenic | 30.0% | |
| TTGTATGTCTACATGTACAT+GGG | - | chr4_3:26626548-26626567 | None:intergenic | 30.0% | |
| AAAATTGCATGGTCAAAAGA+GGG | - | chr4_3:26626942-26626961 | None:intergenic | 30.0% | |
| AAAAATTGCATGGTCAAAAG+AGG | - | chr4_3:26626943-26626962 | None:intergenic | 30.0% | |
| ATTCAACAAGCAAGCAAACA+GGG | + | chr4_3:26623259-26623278 | Msa0636450:five_prime_UTR | 35.0% | |
| !! | GTTTTAGATGGAAGTGAATG+AGG | - | chr4_3:26623421-26623440 | None:intergenic | 35.0% |
| !!! | GGGAATAAGTGAGTTTTAGA+TGG | - | chr4_3:26623433-26623452 | None:intergenic | 35.0% |
| ! | TTTAACAAAGCATCATGGGT+TGG | - | chr4_3:26623576-26623595 | None:intergenic | 35.0% |
| ! | ACCCATGATGCTTTGTTAAA+AGG | + | chr4_3:26623576-26623595 | Msa0636450:five_prime_UTR | 35.0% |
| !! | CCCTTTTAACAAAGCATCAT+GGG | - | chr4_3:26623580-26623599 | None:intergenic | 35.0% |
| ! | CCCATGATGCTTTGTTAAAA+GGG | + | chr4_3:26623577-26623596 | Msa0636450:five_prime_UTR | 35.0% |
| !! | TCCCTTTTAACAAAGCATCA+TGG | - | chr4_3:26623581-26623600 | None:intergenic | 35.0% |
| ! | GGGATGAAAATGAAGTTTTC+AGG | + | chr4_3:26623597-26623616 | Msa0636450:exon | 35.0% |
| TAGTTGTAGTCGTAGATTAC+CGG | + | chr4_3:26623674-26623693 | Msa0636450:CDS | 35.0% | |
| GTAAACAATATCTACCTCCT+TGG | + | chr4_3:26623787-26623806 | Msa0636450:CDS | 35.0% | |
| AATATCTACCTCCTTGGTTT+AGG | + | chr4_3:26623793-26623812 | Msa0636450:CDS | 35.0% | |
| TGATCGTTAAATGTGTGAGA+CGG | + | chr4_3:26623861-26623880 | Msa0636450:intron | 35.0% | |
| GGTTACAATATAGGCTTATG+TGG | + | chr4_3:26624011-26624030 | Msa0636450:intron | 35.0% | |
| TATAGGCTTATGTGGCAATA+TGG | + | chr4_3:26624019-26624038 | Msa0636450:intron | 35.0% | |
| TCAGACAATATAGGCTTATG+AGG | + | chr4_3:26624079-26624098 | Msa0636450:intron | 35.0% | |
| ACTGGACAGACAATCATTAT+AGG | + | chr4_3:26624346-26624365 | Msa0636450:CDS | 35.0% | |
| ! | GCTTGTTAACGAAAATGAAC+GGG | + | chr4_3:26624478-26624497 | Msa0636450:intron | 35.0% |
| CTTGTTAACGAAAATGAACG+GGG | + | chr4_3:26624479-26624498 | Msa0636450:intron | 35.0% | |
| ATGATTGGAGTCATTCACAT+CGG | - | chr4_3:26624526-26624545 | None:intergenic | 35.0% | |
| ! | AGCGACAATTTTCTAACCTT+TGG | - | chr4_3:26625041-26625060 | None:intergenic | 35.0% |
| ACTAAGCTGTACTTAAATGG+TGG | + | chr4_3:26625429-26625448 | Msa0636450:intron | 35.0% | |
| ! | GACCTTTGGATTTTGTAGTA+AGG | + | chr4_3:26625611-26625630 | Msa0636450:intron | 35.0% |
| CTCCTTACTACAAAATCCAA+AGG | - | chr4_3:26625616-26625635 | None:intergenic | 35.0% | |
| TTCAGAAGCAATATGACTCT+TGG | - | chr4_3:26626041-26626060 | None:intergenic | 35.0% | |
| CAATAGTAGATAGGAGATAG+TGG | - | chr4_3:26626115-26626134 | None:intergenic | 35.0% | |
| TTGGAAATGTATTAAGCTGC+AGG | - | chr4_3:26626250-26626269 | None:intergenic | 35.0% | |
| !!! | TGAATTTTCTGCTGTTTTCC+AGG | + | chr4_3:26626346-26626365 | Msa0636450:intron | 35.0% |
| ! | GAATACTCCTATTTTCAGCT+GGG | - | chr4_3:26626456-26626475 | None:intergenic | 35.0% |
| CTTGTATGTCTACATGTACA+TGG | - | chr4_3:26626549-26626568 | None:intergenic | 35.0% | |
| ATCTGGAAAGTCACGTAAAA+GGG | - | chr4_3:26626639-26626658 | None:intergenic | 35.0% | |
| AATCTGGAAAGTCACGTAAA+AGG | - | chr4_3:26626640-26626659 | None:intergenic | 35.0% | |
| TTCTTCTGACGATTCTTTCT+TGG | + | chr4_3:26626805-26626824 | Msa0636450:intron | 35.0% | |
| AAATTGCATGGTCAAAAGAG+GGG | - | chr4_3:26626941-26626960 | None:intergenic | 35.0% | |
| !! | TTGCTTTATTTCAGGAACCA+GGG | + | chr4_3:26626975-26626994 | Msa0636450:three_prime_UTR | 35.0% |
| CATTCAACAAGCAAGCAAAC+AGG | + | chr4_3:26623258-26623277 | Msa0636450:five_prime_UTR | 40.0% | |
| AGCAAACAGGGTGATACAAT+CGG | + | chr4_3:26623271-26623290 | Msa0636450:five_prime_UTR | 40.0% | |
| ! | TGAAGGATGGAAACTTGCTT+CGG | - | chr4_3:26623351-26623370 | None:intergenic | 40.0% |
| CTTCTTCGAGAAAAACTCAC+CGG | - | chr4_3:26623696-26623715 | None:intergenic | 40.0% | |
| TATGATAAACACGGTGTGCT+TGG | + | chr4_3:26623765-26623784 | Msa0636450:CDS | 40.0% | |
| GATAGTACACACCTAAACCA+AGG | - | chr4_3:26623807-26623826 | None:intergenic | 40.0% | |
| ATTGTAGGACGCTCTCATTT+GGG | - | chr4_3:26624199-26624218 | None:intergenic | 40.0% | |
| !! | TTTTAGTGTCGCTCCAATGA+TGG | + | chr4_3:26624323-26624342 | Msa0636450:intron | 40.0% |
| TGAACTAGAGCAGAACTTGA+TGG | + | chr4_3:26624655-26624674 | Msa0636450:intron | 40.0% | |
| ! | TTTTGCTCAGGACAGATTCT+TGG | + | chr4_3:26624747-26624766 | Msa0636450:intron | 40.0% |
| AAGCACAATGGGATGTTGTT+CGG | - | chr4_3:26624782-26624801 | None:intergenic | 40.0% | |
| CATCCCATTGTGCTTCAAAT+TGG | + | chr4_3:26624787-26624806 | Msa0636450:CDS | 40.0% | |
| ! | CCTCCAATTTGAAGCACAAT+GGG | - | chr4_3:26624793-26624812 | None:intergenic | 40.0% |
| CCATTGTGCTTCAAATTGGA+GGG | + | chr4_3:26624791-26624810 | Msa0636450:CDS | 40.0% | |
| AAGCATAAGACGTACACCAA+AGG | - | chr4_3:26625015-26625034 | None:intergenic | 40.0% | |
| ACGTCTTATGCTTGATCCAA+AGG | + | chr4_3:26625022-26625041 | Msa0636450:CDS | 40.0% | |
| ATTCGACATTTGACACTGAC+AGG | - | chr4_3:26625200-26625219 | None:intergenic | 40.0% | |
| GTCAGTGTCAAATGTCGAAT+TGG | + | chr4_3:26625200-26625219 | Msa0636450:CDS | 40.0% | |
| TGTCAAATGTCGAATTGGTG+TGG | + | chr4_3:26625205-26625224 | Msa0636450:CDS | 40.0% | |
| TTCTCTGTCTCCATGTTGAA+AGG | + | chr4_3:26625275-26625294 | Msa0636450:intron | 40.0% | |
| AACTTGACAGCCTTTCAACA+TGG | - | chr4_3:26625288-26625307 | None:intergenic | 40.0% | |
| TGTTGAAAGGCTGTCAAGTT+TGG | + | chr4_3:26625288-26625307 | Msa0636450:intron | 40.0% | |
| ! | CATCTTTTCCCACACCAATT+AGG | - | chr4_3:26625551-26625570 | None:intergenic | 40.0% |
| CTAATTGGTGTGGGAAAAGA+TGG | + | chr4_3:26625549-26625568 | Msa0636450:intron | 40.0% | |
| !! | TGGGAAAAGATGGTGGAAAA+GGG | + | chr4_3:26625559-26625578 | Msa0636450:intron | 40.0% |
| AGTAAGGAGAGTAGATCACA+TGG | + | chr4_3:26625627-26625646 | Msa0636450:intron | 40.0% | |
| CAATATAGTATCATTGGGGG+AGG | + | chr4_3:26625888-26625907 | Msa0636450:intron | 40.0% | |
| ! | TGGCCATGTTTTACCACAAA+GGG | - | chr4_3:26626021-26626040 | None:intergenic | 40.0% |
| ! | TTGGCCATGTTTTACCACAA+AGG | - | chr4_3:26626022-26626041 | None:intergenic | 40.0% |
| TATTGCTTCTGAACCCTTTG+TGG | + | chr4_3:26626048-26626067 | Msa0636450:intron | 40.0% | |
| TCCAGGTGAATTCATATCCA+CGG | + | chr4_3:26626363-26626382 | Msa0636450:intron | 40.0% | |
| ! | GGAATACTCCTATTTTCAGC+TGG | - | chr4_3:26626457-26626476 | None:intergenic | 40.0% |
| !! | ATAGGAGTATTCCTCCACTA+AGG | + | chr4_3:26626464-26626483 | Msa0636450:CDS | 40.0% |
| ACTTCAACATACCTTAGTGG+AGG | - | chr4_3:26626478-26626497 | None:intergenic | 40.0% | |
| !! | AGGCATTACTAGTGTTGATG+AGG | + | chr4_3:26626679-26626698 | Msa0636450:CDS | 40.0% |
| ! | TCTTTCTTGGCCTGTTTTCA+CGG | + | chr4_3:26626818-26626837 | Msa0636450:intron | 40.0% |
| !! | GTTGCTTTATTTCAGGAACC+AGG | + | chr4_3:26626974-26626993 | Msa0636450:three_prime_UTR | 40.0% |
| ATCGGCGAACTGTGAATTGA+CGG | + | chr4_3:26623289-26623308 | Msa0636450:five_prime_UTR | 45.0% | |
| GAAGTGAATGAGGAACAGAG+AGG | - | chr4_3:26623411-26623430 | None:intergenic | 45.0% | |
| AGTACACACCTAAACCAAGG+AGG | - | chr4_3:26623804-26623823 | None:intergenic | 45.0% | |
| AGGCTTATGTGGCAATATGG+TGG | + | chr4_3:26624022-26624041 | Msa0636450:intron | 45.0% | |
| GGCTTATGTGGCAATATGGT+GGG | + | chr4_3:26624023-26624042 | Msa0636450:intron | 45.0% | |
| CATTGTAGGACGCTCTCATT+TGG | - | chr4_3:26624200-26624219 | None:intergenic | 45.0% | |
| TTGTCTGTCCAGTCCATCAT+TGG | - | chr4_3:26624339-26624358 | None:intergenic | 45.0% | |
| GCCTCATTTCAAAGCATGCT+TGG | + | chr4_3:26624379-26624398 | Msa0636450:CDS | 45.0% | |
| !! | GCCAAGCATGCTTTGAAATG+AGG | - | chr4_3:26624383-26624402 | None:intergenic | 45.0% |
| AACGAAAATGAACGGGGACA+AGG | + | chr4_3:26624485-26624504 | Msa0636450:intron | 45.0% | |
| GTGGTAGAGTATATCCGTGT+AGG | + | chr4_3:26624554-26624573 | Msa0636450:intron | 45.0% | |
| TTCACACAGTGACACGCATA+TGG | - | chr4_3:26624639-26624658 | None:intergenic | 45.0% | |
| AGCACAATGGGATGTTGTTC+GGG | - | chr4_3:26624781-26624800 | None:intergenic | 45.0% | |
| CCCATTGTGCTTCAAATTGG+AGG | + | chr4_3:26624790-26624809 | Msa0636450:CDS | 45.0% | |
| ! | CCCTCCAATTTGAAGCACAA+TGG | - | chr4_3:26624794-26624813 | None:intergenic | 45.0% |
| !! | ACAAGGAAAGTTTGTTGCGG+AGG | + | chr4_3:26625142-26625161 | Msa0636450:intron | 45.0% |
| ATTGGTGTGGGAAAAGATGG+TGG | + | chr4_3:26625552-26625571 | Msa0636450:intron | 45.0% | |
| !! | GTGGGAAAAGATGGTGGAAA+AGG | + | chr4_3:26625558-26625577 | Msa0636450:intron | 45.0% |
| !! | GGGAAAAGATGGTGGAAAAG+GGG | + | chr4_3:26625560-26625579 | Msa0636450:intron | 45.0% |
| AAAAGGGGCTTAGGTGGTTT+GGG | + | chr4_3:26625575-26625594 | Msa0636450:intron | 45.0% | |
| GCATGTAGAGAGAAGACCTT+TGG | + | chr4_3:26625597-26625616 | Msa0636450:intron | 45.0% | |
| AAGGAGAGTAGATCACATGG+AGG | + | chr4_3:26625630-26625649 | Msa0636450:intron | 45.0% | |
| GGAGGATTGTCAATCACTAG+AGG | + | chr4_3:26625648-26625667 | Msa0636450:intron | 45.0% | |
| TTGTCAATCACTAGAGGCAG+AGG | + | chr4_3:26625654-26625673 | Msa0636450:intron | 45.0% | |
| ! | AAGCCTTATCCCATGAAGTG+GGG | - | chr4_3:26625794-26625813 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCATGAAGT+GGG | - | chr4_3:26625795-26625814 | None:intergenic | 45.0% |
| ! | AGGCTTGGTTGTTGTTGTTG+TGG | + | chr4_3:26625808-26625827 | Msa0636450:intron | 45.0% |
| ! | GGCTTGGTTGTTGTTGTTGT+GGG | + | chr4_3:26625809-26625828 | Msa0636450:intron | 45.0% |
| ! | CCATGTTTTACCACAAAGGG+TGG | - | chr4_3:26626018-26626037 | None:intergenic | 45.0% |
| CCACCCTTTGTGGTAAAACA+TGG | + | chr4_3:26626015-26626034 | Msa0636450:intron | 45.0% | |
| ! | GTAGATAGGAGATAGTGGCT+GGG | - | chr4_3:26626110-26626129 | None:intergenic | 45.0% |
| ! | AGTAGATAGGAGATAGTGGC+TGG | - | chr4_3:26626111-26626130 | None:intergenic | 45.0% |
| ACCGTGGATATGAATTCACC+TGG | - | chr4_3:26626367-26626386 | None:intergenic | 45.0% | |
| GGGTGATAAAGAAGAAACCG+TGG | - | chr4_3:26626383-26626402 | None:intergenic | 45.0% | |
| GCATTAGCCCAGCTGAAAAT+AGG | + | chr4_3:26626446-26626465 | Msa0636450:CDS | 45.0% | |
| ! | CTTTCTTGGCCTGTTTTCAC+GGG | + | chr4_3:26626819-26626838 | Msa0636450:intron | 45.0% |
| ! | TTTCTTGGCCTGTTTTCACG+GGG | + | chr4_3:26626820-26626839 | Msa0636450:intron | 45.0% |
| TCGGCGAACTGTGAATTGAC+GGG | + | chr4_3:26623290-26623309 | Msa0636450:five_prime_UTR | 50.0% | |
| TCTCCTTCTCAATCCGAACC+CGG | + | chr4_3:26623323-26623342 | Msa0636450:five_prime_UTR | 50.0% | |
| GTCCAGCTACTCTTGGACTT+GGG | - | chr4_3:26624986-26625005 | None:intergenic | 50.0% | |
| TGTCCAGCTACTCTTGGACT+TGG | - | chr4_3:26624987-26625006 | None:intergenic | 50.0% | |
| AGTCCAAGAGTAGCTGGACA+TGG | + | chr4_3:26624987-26625006 | Msa0636450:CDS | 50.0% | |
| GTCCAAGAGTAGCTGGACAT+GGG | + | chr4_3:26624988-26625007 | Msa0636450:CDS | 50.0% | |
| !! | AGATGGTGGAAAAGGGGCTT+AGG | + | chr4_3:26625566-26625585 | Msa0636450:intron | 50.0% |
| GAAAAGGGGCTTAGGTGGTT+TGG | + | chr4_3:26625574-26625593 | Msa0636450:intron | 50.0% | |
| !! | ATGAAGTGGGGTTGGCTACA+TGG | - | chr4_3:26625782-26625801 | None:intergenic | 50.0% |
| ATGTAGCCAACCCCACTTCA+TGG | + | chr4_3:26625781-26625800 | Msa0636450:intron | 50.0% | |
| TGTAGCCAACCCCACTTCAT+GGG | + | chr4_3:26625782-26625801 | Msa0636450:intron | 50.0% | |
| CTTATCCCATGAAGTGGGGT+TGG | - | chr4_3:26625790-26625809 | None:intergenic | 50.0% | |
| CAACCCCACTTCATGGGATA+AGG | + | chr4_3:26625788-26625807 | Msa0636450:intron | 50.0% | |
| ! | CCAAGCCTTATCCCATGAAG+TGG | - | chr4_3:26625796-26625815 | None:intergenic | 50.0% |
| CCACTTCATGGGATAAGGCT+TGG | + | chr4_3:26625793-26625812 | Msa0636450:intron | 50.0% | |
| !!! | TGGGGGAGGAGTTTTGTTCT+TGG | + | chr4_3:26625902-26625921 | Msa0636450:intron | 50.0% |
| TTTGGTAGGACCACCCTTTG+TGG | + | chr4_3:26626005-26626024 | Msa0636450:intron | 50.0% | |
| TGAGCAGTGCCTTCCTTGAA+TGG | - | chr4_3:26626423-26626442 | None:intergenic | 50.0% | |
| !! | TCAAGGAAGGCACTGCTCAA+TGG | + | chr4_3:26626424-26626443 | Msa0636450:CDS | 50.0% |
| ACCAAAGTCCCCGTGAAAAC+AGG | - | chr4_3:26626831-26626850 | None:intergenic | 50.0% | |
| TTCACGGGGACTTTGGTTGT+AGG | + | chr4_3:26626834-26626853 | Msa0636450:intron | 50.0% | |
| TCAATGCAGCACGAGATGCT+GGG | + | chr4_3:26626857-26626876 | Msa0636450:CDS | 50.0% | |
| ! | ATGGAAACTTGCTTCGGCGC+CGG | - | chr4_3:26623345-26623364 | None:intergenic | 55.0% |
| !! | GTGTCGCTCCAATGATGGAC+TGG | + | chr4_3:26624328-26624347 | Msa0636450:intron | 55.0% |
| TGCCCAAGTCCAAGAGTAGC+TGG | + | chr4_3:26624981-26625000 | Msa0636450:CDS | 55.0% | |
| GACCCATGTCCAGCTACTCT+TGG | - | chr4_3:26624993-26625012 | None:intergenic | 55.0% | |
| GTAGCTGGACATGGGTCCTT+TGG | + | chr4_3:26624996-26625015 | Msa0636450:CDS | 55.0% | |
| TGGTGGAAAAGGGGCTTAGG+TGG | + | chr4_3:26625569-26625588 | Msa0636450:intron | 55.0% | |
| ! | GCCTGTTTTCACGGGGACTT+TGG | + | chr4_3:26626827-26626846 | Msa0636450:intron | 55.0% |
| GTCAATGCAGCACGAGATGC+TGG | + | chr4_3:26626856-26626875 | Msa0636450:CDS | 55.0% | |
| CAATGCAGCACGAGATGCTG+GGG | + | chr4_3:26626858-26626877 | Msa0636450:CDS | 55.0% | |
| !! | GGGGCGCATGGTGTTATGAT+TGG | + | chr4_3:26626877-26626896 | Msa0636450:CDS | 55.0% |
| ! | TGGAAACTTGCTTCGGCGCC+GGG | - | chr4_3:26623344-26623363 | None:intergenic | 60.0% |
| GCGCCGGGTTCGGATTGAGA+AGG | - | chr4_3:26623329-26623348 | None:intergenic | 65.0% | |
| ! | ACTTGCTTCGGCGCCGGGTT+CGG | - | chr4_3:26623339-26623358 | None:intergenic | 65.0% |
| GCACGAGATGCTGGGGCGCA+TGG | + | chr4_3:26626865-26626884 | Msa0636450:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 26623254 | 26627001 | 26623254 | ID=Msa0636450;Name=Msa0636450 |
| chr4_3 | mRNA | 26623254 | 26627001 | 26623254 | ID=Msa0636450-mRNA-1;Parent=Msa0636450;Name=Msa0636450-mRNA-1;_AED=0.09;_eAED=0.09;_QI=157|0.87|0.88|1|0.87|0.88|9|80|298 |
| chr4_3 | exon | 26623254 | 26623371 | 26623254 | ID=Msa0636450-mRNA-1:exon:6702;Parent=Msa0636450-mRNA-1 |
| chr4_3 | exon | 26623561 | 26623814 | 26623561 | ID=Msa0636450-mRNA-1:exon:6703;Parent=Msa0636450-mRNA-1 |
| chr4_3 | exon | 26624329 | 26624455 | 26624329 | ID=Msa0636450-mRNA-1:exon:6704;Parent=Msa0636450-mRNA-1 |
| chr4_3 | exon | 26624757 | 26624884 | 26624757 | ID=Msa0636450-mRNA-1:exon:6705;Parent=Msa0636450-mRNA-1 |
| chr4_3 | exon | 26624974 | 26625043 | 26624974 | ID=Msa0636450-mRNA-1:exon:6706;Parent=Msa0636450-mRNA-1 |
| chr4_3 | exon | 26625164 | 26625254 | 26625164 | ID=Msa0636450-mRNA-1:exon:6707;Parent=Msa0636450-mRNA-1 |
| chr4_3 | exon | 26626368 | 26626485 | 26626368 | ID=Msa0636450-mRNA-1:exon:6708;Parent=Msa0636450-mRNA-1 |
| chr4_3 | exon | 26626619 | 26626700 | 26626619 | ID=Msa0636450-mRNA-1:exon:6709;Parent=Msa0636450-mRNA-1 |
| chr4_3 | exon | 26626856 | 26627001 | 26626856 | ID=Msa0636450-mRNA-1:exon:6710;Parent=Msa0636450-mRNA-1 |
| chr4_3 | five_prime_UTR | 26623254 | 26623371 | 26623254 | ID=Msa0636450-mRNA-1:five_prime_utr;Parent=Msa0636450-mRNA-1 |
| chr4_3 | five_prime_UTR | 26623561 | 26623599 | 26623561 | ID=Msa0636450-mRNA-1:five_prime_utr;Parent=Msa0636450-mRNA-1 |
| chr4_3 | CDS | 26623600 | 26623814 | 26623600 | ID=Msa0636450-mRNA-1:cds;Parent=Msa0636450-mRNA-1 |
| chr4_3 | CDS | 26624329 | 26624455 | 26624329 | ID=Msa0636450-mRNA-1:cds;Parent=Msa0636450-mRNA-1 |
| chr4_3 | CDS | 26624757 | 26624884 | 26624757 | ID=Msa0636450-mRNA-1:cds;Parent=Msa0636450-mRNA-1 |
| chr4_3 | CDS | 26624974 | 26625043 | 26624974 | ID=Msa0636450-mRNA-1:cds;Parent=Msa0636450-mRNA-1 |
| chr4_3 | CDS | 26625164 | 26625254 | 26625164 | ID=Msa0636450-mRNA-1:cds;Parent=Msa0636450-mRNA-1 |
| chr4_3 | CDS | 26626368 | 26626485 | 26626368 | ID=Msa0636450-mRNA-1:cds;Parent=Msa0636450-mRNA-1 |
| chr4_3 | CDS | 26626619 | 26626700 | 26626619 | ID=Msa0636450-mRNA-1:cds;Parent=Msa0636450-mRNA-1 |
| chr4_3 | CDS | 26626856 | 26626921 | 26626856 | ID=Msa0636450-mRNA-1:cds;Parent=Msa0636450-mRNA-1 |
| chr4_3 | three_prime_UTR | 26626922 | 26627001 | 26626922 | ID=Msa0636450-mRNA-1:three_prime_utr;Parent=Msa0636450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
