AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0762480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0762480 MtrunA17_Chr5g0412871 98.753 481 6 0 1 481 1 481 0.0 982
Msa0762480 MtrunA17_Chr8g0345201 49.378 482 233 3 3 474 44 524 2.56e-166 479
Msa0762480 MtrunA17_Chr6g0475681 24.868 378 250 14 93 463 173 523 2.26e-22 100
Msa0762480 MtrunA17_Chr7g0248681 26.953 256 172 9 100 352 86 329 2.74e-19 90.5
Msa0762480 MtrunA17_Chr8g0387481 26.012 346 225 14 100 438 87 408 6.17e-19 89.4
Msa0762480 MtrunA17_Chr6g0488041 25.784 287 191 11 94 376 84 352 8.13e-19 88.6
Msa0762480 MtrunA17_Chr3g0135251 23.607 377 252 16 100 466 78 428 8.17e-19 89.0
Msa0762480 MtrunA17_Chr2g0324801 24.211 380 235 12 74 440 17 356 1.36e-18 87.4
Msa0762480 MtrunA17_Chr8g0389311 25.649 308 208 13 103 407 83 372 8.36e-18 85.5
Msa0762480 MtrunA17_Chr8g0389321 25.649 308 208 13 103 407 83 372 8.36e-18 85.5
Msa0762480 MtrunA17_Chr8g0360241 23.077 377 247 14 72 440 47 388 1.23e-17 85.1
Msa0762480 MtrunA17_Chr5g0400831 27.723 202 132 7 100 291 79 276 2.05e-16 81.6
Msa0762480 MtrunA17_Chr8g0348351 25.424 177 127 4 100 273 86 260 6.59e-16 80.1
Msa0762480 MtrunA17_Chr4g0054371 27.119 177 123 5 100 272 79 253 1.38e-15 79.0
Msa0762480 MtrunA17_Chr5g0398431 25.874 143 103 3 129 270 178 318 1.18e-12 70.1
Msa0762480 MtrunA17_Chr3g0114811 22.493 369 240 15 99 463 115 441 4.26e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0762480 AT1G70580.4 84.823 481 73 0 1 481 1 481 0.0 866
Msa0762480 AT1G70580.2 84.823 481 73 0 1 481 1 481 0.0 866
Msa0762480 AT1G70580.3 84.823 481 73 0 1 481 1 481 0.0 866
Msa0762480 AT1G70580.1 84.823 481 73 0 1 481 1 481 0.0 866
Msa0762480 AT1G23310.1 84.200 481 76 0 1 481 1 481 0.0 861
Msa0762480 AT1G23310.2 84.738 439 67 0 1 439 1 439 0.0 788
Msa0762480 AT1G72330.1 49.582 478 230 3 5 472 62 538 3.02e-169 488
Msa0762480 AT1G72330.3 48.269 491 230 4 5 472 62 551 1.17e-165 479
Msa0762480 AT1G17290.1 49.583 480 231 3 5 474 65 543 5.93e-164 474
Msa0762480 AT1G72330.2 49.570 349 165 3 5 343 62 409 4.46e-116 348
Msa0762480 AT2G20610.1 24.930 357 226 14 97 447 98 418 5.58e-21 95.9
Msa0762480 AT5G51690.2 23.037 382 258 14 95 468 17 370 1.78e-20 93.6
Msa0762480 AT2G24850.1 24.074 378 242 13 97 466 81 421 1.83e-20 94.4
Msa0762480 AT5G51690.1 23.037 382 258 14 95 468 140 493 2.39e-20 94.4
Msa0762480 AT2G20610.2 24.633 341 218 13 97 431 98 405 1.39e-19 91.3
Msa0762480 AT5G36160.1 23.881 402 251 17 83 476 65 419 3.96e-19 89.7
Msa0762480 AT1G62960.1 24.084 382 254 17 99 471 202 556 6.25e-19 90.1
Msa0762480 AT4G11280.1 26.182 275 186 9 100 371 90 350 2.13e-17 85.1
Msa0762480 AT4G26200.1 25.703 249 175 7 47 291 43 285 9.32e-17 82.8
Msa0762480 AT4G28420.2 23.134 402 266 15 69 465 64 427 1.62e-16 82.0
Msa0762480 AT4G28410.1 23.097 381 238 12 74 440 77 416 1.59e-15 79.0
Msa0762480 AT4G23590.1 21.260 381 254 13 98 472 68 408 3.39e-15 77.8
Msa0762480 AT4G28420.1 25.000 240 163 6 69 308 64 286 4.75e-15 77.4
Msa0762480 AT4G08040.1 22.849 372 260 13 100 467 77 425 6.51e-15 77.4
Msa0762480 AT4G28410.2 22.400 375 236 11 74 434 77 410 1.16e-14 76.3
Msa0762480 AT5G53970.1 22.556 399 264 14 72 464 40 399 1.36e-14 75.9
Msa0762480 AT4G23600.1 21.359 412 247 19 85 477 60 413 8.74e-14 73.6
Msa0762480 AT5G65800.1 28.788 198 131 6 100 291 79 272 9.58e-14 73.6
Msa0762480 AT3G49700.1 28.283 198 132 6 100 291 79 272 1.19e-13 73.6
Msa0762480 AT4G37770.1 22.727 374 259 14 100 466 79 429 2.59e-13 72.4
Msa0762480 AT1G01480.1 22.316 354 240 16 100 443 87 415 6.10e-13 71.2
Msa0762480 AT4G23600.3 24.138 261 161 12 85 342 60 286 7.69e-12 67.4
Msa0762480 AT3G61510.1 24.103 195 138 6 82 273 70 257 1.47e-11 67.0
Msa0762480 AT1G01480.2 22.601 323 217 15 129 443 12 309 6.02e-11 64.7
Msa0762480 AT2G22810.1 26.286 175 123 5 100 270 79 251 8.03e-11 64.7

Find 153 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGCTTCAACCTTATTATT+TGG 0.103405 5_2:-20684861 Msa0762480:three_prime_UTR
TGGCCTAGCTTTAGGCTTAA+AGG 0.222985 5_2:+20692956 None:intergenic
ACTGTTCCTGGCTCAGGATT+TGG 0.236800 5_2:-20686291 Msa0762480:CDS
ATTAATCGACTCATAGTCTA+AGG 0.247563 5_2:+20691502 None:intergenic
GGAAGAAATGCCTGCTATTA+TGG 0.271511 5_2:-20685307 Msa0762480:CDS
AGCTGGACTTCCTTGCTTAA+AGG 0.291078 5_2:+20688202 None:intergenic
GTGGTTCATGTTTGTTTGTT+TGG 0.292831 5_2:+20693069 None:intergenic
AATATTTGTGCTGGAACATT+TGG 0.293542 5_2:+20687203 None:intergenic
TTAGCAGTCTCTAAAGCTTT+TGG 0.293897 5_2:+20686378 None:intergenic
AAGCTTCAACCTTATTATTT+GGG 0.297059 5_2:-20684860 Msa0762480:three_prime_UTR
TTACTACTGTCTCAAGCTTT+TGG 0.300237 5_2:-20686331 Msa0762480:CDS
TCATTCACATCGGGTGGTTT+AGG 0.306462 5_2:-20690324 Msa0762480:intron
TTTCTTACGACAAATTTGTT+AGG 0.315147 5_2:-20687037 Msa0762480:CDS
TCTGCAACAATTGCTCTTCT+TGG 0.315497 5_2:-20688725 Msa0762480:CDS
TCGTCATCTCCCAAATAATA+AGG 0.321063 5_2:+20684851 None:intergenic
AAAGTTCAATGATGATTTCA+TGG 0.322465 5_2:-20685274 Msa0762480:CDS
TGTTGGAAACCCACATGCTT+TGG 0.325099 5_2:-20690646 Msa0762480:CDS
CACTGGCCAGTAGGGTTTCC+AGG 0.336167 5_2:+20688460 None:intergenic
CCTCGAAGAGACAGCAAATT+GGG 0.336543 5_2:-20688681 Msa0762480:CDS
ACCCTTCATTAGTGCCAAAA+AGG 0.337700 5_2:-20688332 Msa0762480:intron
GCCACTTCCTTCCTCACTGC+TGG 0.358669 5_2:+20689116 None:intergenic
GTTAGAGAGGCTCGCTATAA+AGG 0.359225 5_2:-20688629 Msa0762480:CDS
AAGATGATTGTTTGCCATCA+TGG 0.374038 5_2:+20685072 None:intergenic
GCTTCAGAAGGAGGGCAAAA+AGG 0.374053 5_2:-20691420 Msa0762480:intron
GCTGTCTCTTCGAGGTAGTA+TGG 0.374958 5_2:+20688689 None:intergenic
ACCTCGAAGAGACAGCAAAT+TGG 0.375963 5_2:-20688682 Msa0762480:CDS
GGCCTAGCTTTAGGCTTAAA+GGG 0.384379 5_2:+20692957 None:intergenic
TCAGTGTCGAAAGGGTATTT+TGG 0.386014 5_2:-20688166 Msa0762480:CDS
ACAATGTCCTTACACAATAT+AGG 0.393073 5_2:+20684753 None:intergenic
GAAGAAAATTTAGTCTTGCT+TGG 0.393995 5_2:-20688394 Msa0762480:CDS
GTTGGAAACCCACATGCTTT+GGG 0.394384 5_2:-20690645 Msa0762480:CDS
GTAATATAGTTGTCCTCAAA+TGG 0.400999 5_2:+20685337 None:intergenic
AGCTTTAGAGACTGCTAAAC+AGG 0.401858 5_2:-20686373 Msa0762480:CDS
CAGATTATATTCACTAATGT+TGG 0.402510 5_2:-20690663 Msa0762480:CDS
ACTGGCATATCCACTGTTCC+TGG 0.402775 5_2:-20686303 Msa0762480:CDS
TTCTTCTATCAATCAATCTA+AGG 0.403616 5_2:-20692703 Msa0762480:intron
CCCAATTTGCTGTCTCTTCG+AGG 0.403674 5_2:+20688681 None:intergenic
TTACCAGACAAATATATATC+AGG 0.407014 5_2:-20688362 Msa0762480:CDS
ACAGGTTGTTGCCTTGTGCC+AGG 0.408208 5_2:-20690424 Msa0762480:intron
ATATCCACTGTTCCTGGCTC+AGG 0.412282 5_2:-20686297 Msa0762480:CDS
GTAAGAAATATCTCCAGGTT+TGG 0.421350 5_2:+20687052 None:intergenic
GACTCATAGTCTAAGGGCTT+TGG 0.425588 5_2:+20691509 None:intergenic
AGTATAATTATTTATTTATG+TGG 0.425635 5_2:+20692829 None:intergenic
TTCTGTCCAAATCCTGAGCC+AGG 0.442611 5_2:+20686285 None:intergenic
CATCCTGATATATATTTGTC+TGG 0.447557 5_2:+20688359 None:intergenic
TAAGAAATATCTCCAGGTTT+GGG 0.454322 5_2:+20687053 None:intergenic
GCAACAATTGCTCTTCTTGG+TGG 0.456592 5_2:-20688722 Msa0762480:CDS
TTCTTACGACAAATTTGTTA+GGG 0.458736 5_2:-20687036 Msa0762480:CDS
CAGAGTAGAGTGGGTATTGT+GGG 0.463276 5_2:+20688744 None:intergenic
GCTCTTGCAATTGCATCAGC+GGG 0.466274 5_2:+20690360 None:intergenic
TTGTCGTAAGAAATATCTCC+AGG 0.466329 5_2:+20687047 None:intergenic
TCACTAAGGCACTGGCCAGT+AGG 0.479549 5_2:+20688451 None:intergenic
CAGAAAACCTATATTGTGTA+AGG 0.481822 5_2:-20684760 Msa0762480:three_prime_UTR
GCAGGCATTTCTTCCTCAGC+TGG 0.482109 5_2:+20685315 None:intergenic
TAATCAGAGGCGAAGGAGAT+GGG 0.482526 5_2:-20688867 Msa0762480:CDS
CACTAAGGCACTGGCCAGTA+GGG 0.482562 5_2:+20688452 None:intergenic
TTGAAACTATCCATAATAGC+AGG 0.483460 5_2:+20685297 None:intergenic
TGACTCCACTTAGTGGGATA+AGG 0.485347 5_2:-20684937 Msa0762480:three_prime_UTR
ACCACTGACCTTCCCTCGCC+AGG 0.489247 5_2:-20690616 Msa0762480:intron
CTCTTAAATTCTCTTCACTA+AGG 0.490455 5_2:+20688437 None:intergenic
GGCACAACATATAATAATAC+AGG 0.493819 5_2:+20685093 None:intergenic
TATTATATGTTGTGCCATGA+TGG 0.503878 5_2:-20685086 Msa0762480:three_prime_UTR
ATGTAGCTGACTCCACTTAG+TGG 0.505129 5_2:-20684944 Msa0762480:three_prime_UTR
TAGAGTGGGTATTGTGGGAC+TGG 0.505840 5_2:+20688749 None:intergenic
ATAAATCCTGGAAACCCTAC+TGG 0.506931 5_2:-20688466 Msa0762480:CDS
GGGAATAGCAGTCCAACGTT+AGG 0.507835 5_2:+20690381 None:intergenic
GTTGTTTGCAATTTCACAGA+AGG 0.509314 5_2:-20686548 Msa0762480:intron
TTTAGTCTTGCTTGGAGATG+AGG 0.510094 5_2:-20688386 Msa0762480:CDS
ATTATTTATTTATGTGGCAG+TGG 0.510548 5_2:+20692835 None:intergenic
TTTGCCCTCCTTCTGAAGCT+CGG 0.511768 5_2:+20691424 None:intergenic
ACGACAAATTTGTTAGGGAG+AGG 0.513028 5_2:-20687031 Msa0762480:intron
TCAGGATTTGGACAGAAAGA+AGG 0.514334 5_2:-20686279 Msa0762480:CDS
TACACTTGTTGTTTCTCACT+CGG 0.515523 5_2:-20692729 Msa0762480:five_prime_UTR
ATGACCACAGAGGTTATTCA+AGG 0.516115 5_2:-20685242 Msa0762480:CDS
CTGATGGATTCAACAGCTGC+AGG 0.516393 5_2:-20686574 Msa0762480:CDS
GGTTTCTGTCCCAAAGCATG+TGG 0.516790 5_2:+20690636 None:intergenic
CAGTATCTCTCATTCACATC+GGG 0.519894 5_2:-20690333 Msa0762480:CDS
AATTCTCTTCACTAAGGCAC+TGG 0.520921 5_2:+20688443 None:intergenic
GCAATGGTGATCATAAATCC+TGG 0.522716 5_2:-20688478 Msa0762480:CDS
GTCAATAGATAACAAGGCAT+TGG 0.525143 5_2:+20692984 None:intergenic
TATTTGAGGGAATGAATACA+TGG 0.526126 5_2:+20686410 None:intergenic
ATGATCAATCCACCCAAACC+TGG 0.527405 5_2:-20687065 Msa0762480:CDS
GATTAATGAAAACGTGAAGA+AGG 0.538917 5_2:-20691486 Msa0762480:CDS
TAACTCACAAATATTTGTGC+TGG 0.540144 5_2:+20687194 None:intergenic
AGGCACTCCAGCAGTGAGGA+AGG 0.545081 5_2:-20689123 Msa0762480:CDS
ACTAAGTGGAGTCAGCTACA+TGG 0.545846 5_2:+20684946 None:intergenic
ACAAACCTCTGGAGGAATGT+TGG 0.548308 5_2:+20688108 None:intergenic
TCCAGCAGTGAGGAAGGAAG+TGG 0.549120 5_2:-20689117 Msa0762480:CDS
CTGAGTGAAAAGAAACAAGC+TGG 0.550221 5_2:+20688185 None:intergenic
CAAAGCCTTATCCCACTAAG+TGG 0.550276 5_2:+20684932 None:intergenic
TCATAGTCTAAGGGCTTTGG+TGG 0.550561 5_2:+20691512 None:intergenic
TCAGTAAGATAGATGAACTC+TGG 0.550763 5_2:+20688928 None:intergenic
ATAATCAGAGGCGAAGGAGA+TGG 0.551065 5_2:-20688868 Msa0762480:CDS
TCTTACTGATGGTGCGAGCA+AGG 0.553432 5_2:-20688914 Msa0762480:CDS
CAATTGTTGCAGAGTAGAGT+GGG 0.553825 5_2:+20688735 None:intergenic
TTAGAGACTGCTAAACAGGC+TGG 0.555028 5_2:-20686369 Msa0762480:CDS
AGAGCAAGGATCATGACTGA+TGG 0.558706 5_2:-20686590 Msa0762480:CDS
GTGCTGAACCTGGCGAGGGA+AGG 0.564545 5_2:+20690608 None:intergenic
GAAATATCTCCAGGTTTGGG+TGG 0.567289 5_2:+20687056 None:intergenic
AGCTCTTGCAATTGCATCAG+CGG 0.568224 5_2:+20690359 None:intergenic
TTAGGATCATCAAGTAGGAA+TGG 0.568415 5_2:+20690399 None:intergenic
GACTTGTAAAACACAGGAGG+AGG 0.569552 5_2:+20684890 None:intergenic
CAACGTTAGGATCATCAAGT+AGG 0.572461 5_2:+20690394 None:intergenic
GCAATTGTTGCAGAGTAGAG+TGG 0.575484 5_2:+20688734 None:intergenic
GAGTTTATACAGAGGCGTGA+TGG 0.576593 5_2:-20689092 Msa0762480:CDS
AGCTACCGAGCTTCAGAAGG+AGG 0.578963 5_2:-20691429 Msa0762480:CDS
GAGTTCATCTATCTTACTGA+TGG 0.582441 5_2:-20688925 Msa0762480:CDS
CTACTTGATGATCCTAACGT+TGG 0.583949 5_2:-20690393 Msa0762480:CDS
TCTTAGGACTTGTAAAACAC+AGG 0.590391 5_2:+20684884 None:intergenic
TGGACTTCCTTGCTTAAAGG+TGG 0.590832 5_2:+20688205 None:intergenic
TATCTCTCATTCACATCGGG+TGG 0.591208 5_2:-20690330 Msa0762480:CDS
TTAATCGACTCATAGTCTAA+GGG 0.594837 5_2:+20691503 None:intergenic
TCGAGCTACCGAGCTTCAGA+AGG 0.594916 5_2:-20691432 Msa0762480:CDS
GTTTCTGTCCCAAAGCATGT+GGG 0.598610 5_2:+20690637 None:intergenic
CAGGATTTGGACAGAAAGAA+GGG 0.599726 5_2:-20686278 Msa0762480:intron
TTGTCAGTGATATATAGAGA+AGG 0.600842 5_2:+20685145 None:intergenic
GCAGAGTAGAGTGGGTATTG+TGG 0.601349 5_2:+20688743 None:intergenic
AATACTATAATCAGAGGCGA+AGG 0.605176 5_2:-20688874 Msa0762480:CDS
GGTATTGTCAATAGATAACA+AGG 0.606528 5_2:+20692978 None:intergenic
TAGTGAAGAGAATTTAAGAG+AGG 0.607939 5_2:-20688434 Msa0762480:CDS
CATCAAGTAGGAATGGAGCC+TGG 0.610744 5_2:+20690406 None:intergenic
ACCTGGCGAGGGAAGGTCAG+TGG 0.613068 5_2:+20690615 None:intergenic
TAGGAATGGAGCCTGGCACA+AGG 0.616418 5_2:+20690413 None:intergenic
TGTAGCTGACTCCACTTAGT+GGG 0.616710 5_2:-20684943 Msa0762480:three_prime_UTR
AAACCATATTTGTAAAACAC+AGG 0.621428 5_2:+20684997 None:intergenic
AAATCCTGAGCCAGGAACAG+TGG 0.624773 5_2:+20686293 None:intergenic
TCTGAAGCTCGGTAGCTCGA+AGG 0.628218 5_2:+20691435 None:intergenic
AATCACTAAGAAGAAGAGCA+AGG 0.628553 5_2:-20686604 Msa0762480:CDS
GACAACTATATTACCAGCTG+AGG 0.628816 5_2:-20685328 Msa0762480:CDS
GCTACCGAGCTTCAGAAGGA+GGG 0.629811 5_2:-20691428 Msa0762480:CDS
AATCAGAGGCGAAGGAGATG+GGG 0.631418 5_2:-20688866 Msa0762480:intron
ACTTCGAAAATCAGTTAGAG+AGG 0.636186 5_2:-20688642 Msa0762480:CDS
AATGACCAACATTCCTCCAG+AGG 0.636754 5_2:-20688113 Msa0762480:intron
TATGGGGCCACCTTTAAGCA+AGG 0.637447 5_2:-20688212 Msa0762480:CDS
CTCGAAGAGACAGCAAATTG+GGG 0.639287 5_2:-20688680 Msa0762480:CDS
GCAGTATCTCTCATTCACAT+CGG 0.640124 5_2:-20690334 Msa0762480:CDS
ATATTAAATACTATAATCAG+AGG 0.642923 5_2:-20688880 Msa0762480:CDS
TACCCTTTAAGCCTAAAGCT+AGG 0.645737 5_2:-20692959 Msa0762480:five_prime_UTR
ATGAAGAGACAAACCTCTGG+AGG 0.648436 5_2:+20688100 None:intergenic
AGTTGTGCTGAACCTGGCGA+GGG 0.653433 5_2:+20690604 None:intergenic
AAGGCTCAGTATGCTGTCAG+AGG 0.653659 5_2:-20691467 Msa0762480:CDS
TAGGACTTGTAAAACACAGG+AGG 0.661000 5_2:+20684887 None:intergenic
AGGAACAGTGGATATGCCAG+TGG 0.664887 5_2:+20686305 None:intergenic
AGAGGCGTGATGGTTATCCA+AGG 0.667903 5_2:-20689082 Msa0762480:intron
AAGTGGCAGAGTTTATACAG+AGG 0.671960 5_2:-20689100 Msa0762480:CDS
TAGTTGTGCTGAACCTGGCG+AGG 0.681080 5_2:+20690603 None:intergenic
CTCGAGGCACTCCAGCAGTG+AGG 0.699635 5_2:-20689127 Msa0762480:CDS
GGTGAATGTGGACAACGTGG+TGG 0.701411 5_2:-20688145 Msa0762480:CDS
GGTGCTTATAGTGATTCTCG+AGG 0.716171 5_2:-20689143 Msa0762480:CDS
CTCTTGCAATTGCATCAGCG+GGG 0.718034 5_2:+20690361 None:intergenic
TTTGGTGAATGTGGACAACG+TGG 0.726588 5_2:-20688148 Msa0762480:CDS
ACAACCTTGAATAACCTCTG+TGG 0.736073 5_2:+20685238 None:intergenic
GAACAATATGATGACCACAG+AGG 0.786019 5_2:-20685252 Msa0762480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTATAATTATTTATTTATG+TGG + chr5_2:20685056-20685075 None:intergenic 10.0%
!!! AATTTTAAAAAAAAATATGG+GGG + chr5_2:20690291-20690310 None:intergenic 10.0%
!!! CAATTTTAAAAAAAAATATG+GGG + chr5_2:20690292-20690311 None:intergenic 10.0%
!!! CCAATTTTAAAAAAAAATAT+GGG + chr5_2:20690293-20690312 None:intergenic 10.0%
!!! CCATATTTTTTTTTAAAATT+GGG - chr5_2:20690291-20690310 Msa0762480:intron 10.0%
!! TTACAATTAAAATGAAAAAT+AGG + chr5_2:20692062-20692081 None:intergenic 10.0%
!!! TTTAAATAGAATATCTTTTT+AGG - chr5_2:20693065-20693084 Msa0762480:five_prime_UTR 10.0%
!!! AATAACTTGTTTTCAAATAT+TGG - chr5_2:20687196-20687215 Msa0762480:intron 15.0%
!! TCTAACAATTTAATTAAATG+TGG + chr5_2:20687368-20687387 None:intergenic 15.0%
!!! AAAAAAGTTTCTGAAAAATT+TGG - chr5_2:20687673-20687692 Msa0762480:intron 15.0%
!!! CAATCTATTTTTAAAATGTA+TGG + chr5_2:20688036-20688055 None:intergenic 15.0%
!! ATATTAAATACTATAATCAG+AGG - chr5_2:20689002-20689021 Msa0762480:intron 15.0%
!!! TTATAAATTAAATTTTGACC+AGG - chr5_2:20689376-20689395 Msa0762480:intron 15.0%
!!! CCCATATTTTTTTTTAAAAT+TGG - chr5_2:20690290-20690309 Msa0762480:intron 15.0%
!!! CCCAATTTTAAAAAAAAATA+TGG + chr5_2:20690294-20690313 None:intergenic 15.0%
!! TTTACTTGTGAAATATATTA+AGG + chr5_2:20692203-20692222 None:intergenic 15.0%
!!! ACATAAATTTATTTTTTGAC+AGG + chr5_2:20692858-20692877 None:intergenic 15.0%
!!! TATGTTTTAGATATGGTATT+TGG + chr5_2:20684790-20684809 None:intergenic 20.0%
!!! TTTAGCTATAAATTTCAAGT+GGG + chr5_2:20685250-20685269 None:intergenic 20.0%
!!! TTTTAGCTATAAATTTCAAG+TGG + chr5_2:20685251-20685270 None:intergenic 20.0%
!!! TTTTGACTTTTGTTTCAATT+GGG - chr5_2:20685279-20685298 Msa0762480:CDS 20.0%
!!! TTTTCCTCTTTGAATTATTT+TGG - chr5_2:20686272-20686291 Msa0762480:intron 20.0%
!! TATAATACACATTCAATGAA+AGG + chr5_2:20686590-20686609 None:intergenic 20.0%
!! TACAGTATAATTATATGTGT+CGG + chr5_2:20686881-20686900 None:intergenic 20.0%
!!! TTTTAAGCAATCAAATCTTT+GGG + chr5_2:20687060-20687079 None:intergenic 20.0%
!! CAAGTTATTTGAATAGAAAA+TGG + chr5_2:20687185-20687204 None:intergenic 20.0%
!! AATTAGTAAAAGTAGAAGTA+TGG + chr5_2:20687305-20687324 None:intergenic 20.0%
!! TCATATTACGAAAATTACAA+GGG + chr5_2:20687330-20687349 None:intergenic 20.0%
!! ATCATATTACGAAAATTACA+AGG + chr5_2:20687331-20687350 None:intergenic 20.0%
!!! ATTTGTTGATTATTCTATTG+TGG - chr5_2:20687402-20687421 Msa0762480:intron 20.0%
!! CAAATCATTGTTATATAATG+TGG - chr5_2:20687597-20687616 Msa0762480:intron 20.0%
!! AAAAACAAAGGATAATTGAA+TGG + chr5_2:20687824-20687843 None:intergenic 20.0%
!! TTCATGAAACAAGTTTATTT+GGG + chr5_2:20687880-20687899 None:intergenic 20.0%
!!! GTTTATTTTATCTGTGAAAA+TGG + chr5_2:20687994-20688013 None:intergenic 20.0%
!! TCTCTCTATTACAATTAAAA+AGG - chr5_2:20688140-20688159 Msa0762480:CDS 20.0%
!!! ATTTTTACTTTGTATGTGTT+TGG + chr5_2:20688192-20688211 None:intergenic 20.0%
!! ACATACTGTTAGAAATTAAA+CGG - chr5_2:20688215-20688234 Msa0762480:CDS 20.0%
!!! AAGTCACATTTTTATTAGAA+TGG - chr5_2:20688335-20688354 Msa0762480:CDS 20.0%
!! ATATAAAATTCAGATGGTAA+TGG + chr5_2:20688594-20688613 None:intergenic 20.0%
!! AGTAAGATATAAAATTCAGA+TGG + chr5_2:20688600-20688619 None:intergenic 20.0%
!! TTGCAAAAACATCTTATAAA+CGG - chr5_2:20688865-20688884 Msa0762480:intron 20.0%
!! TTAACTTAAATTTCAGTACA+AGG + chr5_2:20690010-20690029 None:intergenic 20.0%
!! TAATACAAGATGTAATCAAT+AGG - chr5_2:20690244-20690263 Msa0762480:intron 20.0%
!!! ATTTAGCAAAATTAGTCTTT+AGG + chr5_2:20690884-20690903 None:intergenic 20.0%
!!! CAAAATCAAAAATTTTCGTT+TGG - chr5_2:20690906-20690925 Msa0762480:intron 20.0%
!! GATAAAAGAAGAAAATAAAG+GGG + chr5_2:20691641-20691660 None:intergenic 20.0%
!! GGATAAAAGAAGAAAATAAA+GGG + chr5_2:20691642-20691661 None:intergenic 20.0%
!! TAAAAAATGGCATAGAAAAA+GGG + chr5_2:20691663-20691682 None:intergenic 20.0%
!!! TTATCTTTTGCTATAGAAAT+AGG - chr5_2:20691914-20691933 Msa0762480:intron 20.0%
!!! TTGGTTGTATGTTTTAGATA+TGG + chr5_2:20684797-20684816 None:intergenic 25.0%
!! GGATTATTGAATTTTTGCAA+GGG + chr5_2:20684974-20684993 None:intergenic 25.0%
!! AGGATTATTGAATTTTTGCA+AGG + chr5_2:20684975-20684994 None:intergenic 25.0%
! ATTATTTATTTATGTGGCAG+TGG + chr5_2:20685050-20685069 None:intergenic 25.0%
! TTCTTCTATCAATCAATCTA+AGG - chr5_2:20685179-20685198 Msa0762480:three_prime_UTR 25.0%
!!! CTTTTGACTTTTGTTTCAAT+TGG - chr5_2:20685278-20685297 Msa0762480:CDS 25.0%
! ACATCATACAAAACCAAAAA+AGG + chr5_2:20685333-20685352 None:intergenic 25.0%
!! ATGTGTTTTCTTCATGAATT+TGG - chr5_2:20685349-20685368 Msa0762480:intron 25.0%
!!! TAGTCCATAGTTTTAAATTG+CGG - chr5_2:20686023-20686042 Msa0762480:intron 25.0%
! ATTTAACATGTAGTAGTGTA+AGG - chr5_2:20686191-20686210 Msa0762480:intron 25.0%
!! GTATAGTCAAATTTCTTTTC+TGG - chr5_2:20686484-20686503 Msa0762480:intron 25.0%
!! CTGTATAGCTAATTTTTACA+TGG - chr5_2:20686771-20686790 Msa0762480:intron 25.0%
!! TGATTTTCTCAAATTATCAG+CGG - chr5_2:20686906-20686925 Msa0762480:intron 25.0%
! AAAACTGATATTATGAAGCA+CGG + chr5_2:20686972-20686991 None:intergenic 25.0%
!! CTTTTAAGCAATCAAATCTT+TGG + chr5_2:20687061-20687080 None:intergenic 25.0%
! CAAAGATTTGATTGCTTAAA+AGG - chr5_2:20687059-20687078 Msa0762480:CDS 25.0%
! CAGATTATATTCACTAATGT+TGG - chr5_2:20687219-20687238 Msa0762480:CDS 25.0%
! CATATTACGAAAATTACAAG+GGG + chr5_2:20687329-20687348 None:intergenic 25.0%
! AAATTATATAGGTCAGCTTT+AGG + chr5_2:20687430-20687449 None:intergenic 25.0%
!!! TGACCTATATAATTTTTTCC+TGG - chr5_2:20687435-20687454 Msa0762480:intron 25.0%
! TGTCCAGGAAAAAATTATAT+AGG + chr5_2:20687441-20687460 None:intergenic 25.0%
!!! TATATAATTTTTTCCTGGAC+AGG - chr5_2:20687440-20687459 Msa0762480:intron 25.0%
! AAAAGTAACAAAACATTGAC+TGG + chr5_2:20687722-20687741 None:intergenic 25.0%
! TACAATCGATTAAAATGCTT+AGG + chr5_2:20687851-20687870 None:intergenic 25.0%
! CTTCATGAAACAAGTTTATT+TGG + chr5_2:20687881-20687900 None:intergenic 25.0%
! TGAAGATGACAAAAGATATT+TGG - chr5_2:20687896-20687915 Msa0762480:intron 25.0%
! GAAGATGACAAAAGATATTT+GGG - chr5_2:20687897-20687916 Msa0762480:intron 25.0%
!! AAAACAAGTCCTTAAGATTT+TGG + chr5_2:20687952-20687971 None:intergenic 25.0%
!! TCACATTTTTATTAGAATGG+TGG - chr5_2:20688338-20688357 Msa0762480:CDS 25.0%
! CTATCACATAGAAATATACA+TGG - chr5_2:20688516-20688535 Msa0762480:intron 25.0%
!!! GTTTATAAGATGTTTTTGCA+AGG + chr5_2:20688866-20688885 None:intergenic 25.0%
!!! AATAATGTCACTTTCTTCAA+AGG + chr5_2:20689354-20689373 None:intergenic 25.0%
! TTACCAGACAAATATATATC+AGG - chr5_2:20689520-20689539 Msa0762480:intron 25.0%
!! GAAAATTAGAGTATTATCTC+AGG + chr5_2:20689626-20689645 None:intergenic 25.0%
!! CTAATTTTCTTTGCACAAAA+AGG - chr5_2:20689637-20689656 Msa0762480:intron 25.0%
!!! AAAAAGGTTTTGATGGATAT+GGG - chr5_2:20689653-20689672 Msa0762480:intron 25.0%
! TTAAATTTCAGTACAAGGTA+GGG + chr5_2:20690005-20690024 None:intergenic 25.0%
!!! ATGTTTAACAAGCTTTATTG+TGG - chr5_2:20690137-20690156 Msa0762480:intron 25.0%
!! TTTCTTACGACAAATTTGTT+AGG - chr5_2:20690845-20690864 Msa0762480:intron 25.0%
!!! TTCTTACGACAAATTTGTTA+GGG - chr5_2:20690846-20690865 Msa0762480:intron 25.0%
! ATTAGAAATCTATGAAACAC+TGG - chr5_2:20690963-20690982 Msa0762480:intron 25.0%
! TGATCTAAGTCATAAAAAGA+AGG - chr5_2:20691195-20691214 Msa0762480:intron 25.0%
! TCTTTAATAATATGCAGCAA+AGG - chr5_2:20691247-20691266 Msa0762480:intron 25.0%
!! CAGAAGGTATAAATAAATGA+CGG - chr5_2:20691350-20691369 Msa0762480:intron 25.0%
! AAAACTCAATGGATCAATAA+TGG + chr5_2:20691443-20691462 None:intergenic 25.0%
! GGGATAAAAGAAGAAAATAA+AGG + chr5_2:20691643-20691662 None:intergenic 25.0%
! CTAAAAAATGGCATAGAAAA+AGG + chr5_2:20691664-20691683 None:intergenic 25.0%
!!! CTTTTTCTATGCCATTTTTT+AGG - chr5_2:20691662-20691681 Msa0762480:intron 25.0%
! TTCTGATTTAGCCTAAAAAA+TGG + chr5_2:20691676-20691695 None:intergenic 25.0%
!!! ATTATTTTTCCACCATTCTA+AGG - chr5_2:20691695-20691714 Msa0762480:intron 25.0%
!!! TTATTTTTCCACCATTCTAA+GGG - chr5_2:20691696-20691715 Msa0762480:intron 25.0%
!!! TATTTTCATATGCTAGCTTA+TGG + chr5_2:20691859-20691878 None:intergenic 25.0%
! ATTAGCACTTATATCATAAG+TGG - chr5_2:20691944-20691963 Msa0762480:intron 25.0%
!! AGATTTACTTGTGAAGTATT+AGG + chr5_2:20692012-20692031 None:intergenic 25.0%
! TACTTCACAAGTAAATCTTT+CGG - chr5_2:20692014-20692033 Msa0762480:intron 25.0%
! ATGAACAACTTTGCAATTAA+AGG - chr5_2:20692136-20692155 Msa0762480:intron 25.0%
!!! AGTTTTACAGTTAAAAGTGT+AGG + chr5_2:20692325-20692344 None:intergenic 25.0%
! AAAGTTCAATGATGATTTCA+TGG - chr5_2:20692608-20692627 Msa0762480:intron 25.0%
! AAAAAACTAAGGTTTAAGGA+GGG + chr5_2:20692715-20692734 None:intergenic 25.0%
! AAAAAAACTAAGGTTTAAGG+AGG + chr5_2:20692716-20692735 None:intergenic 25.0%
! GGAAAAAAAACTAAGGTTTA+AGG + chr5_2:20692719-20692738 None:intergenic 25.0%
! TAGAGAAGGAAAAAAAACTA+AGG + chr5_2:20692726-20692745 None:intergenic 25.0%
! AAACCATATTTGTAAAACAC+AGG + chr5_2:20692888-20692907 None:intergenic 25.0%
! AAAGCTTCAACCTTATTATT+TGG - chr5_2:20693021-20693040 Msa0762480:five_prime_UTR 25.0%
! AAGCTTCAACCTTATTATTT+GGG - chr5_2:20693022-20693041 Msa0762480:five_prime_UTR 25.0%
!!! TTGATTGTGTTTTGACACAT+TGG + chr5_2:20684864-20684883 None:intergenic 30.0%
GGTATTGTCAATAGATAACA+AGG + chr5_2:20684907-20684926 None:intergenic 30.0%
!! AATGCTTGTGATTGATTTTG+TGG + chr5_2:20684949-20684968 None:intergenic 30.0%
ACTGAAAAAAAGGGTTCAAA+AGG + chr5_2:20684995-20685014 None:intergenic 30.0%
!!! TTTTGAACCCTTTTTTTCAG+TGG - chr5_2:20684994-20685013 Msa0762480:three_prime_UTR 30.0%
ATCATAGCCACTGAAAAAAA+GGG + chr5_2:20685004-20685023 None:intergenic 30.0%
AATCATAGCCACTGAAAAAA+AGG + chr5_2:20685005-20685024 None:intergenic 30.0%
!!! ATTGGGTTTGTGTTATTTTG+AGG - chr5_2:20685296-20685315 Msa0762480:CDS 30.0%
!!! GGATTCTTGTTTTCCTTTTT+TGG - chr5_2:20685317-20685336 Msa0762480:CDS 30.0%
TCTATGTCATGATTTGATTG+TGG - chr5_2:20685374-20685393 Msa0762480:intron 30.0%
! ACTGTAGTAAGTTGAGAAAA+TGG - chr5_2:20685546-20685565 Msa0762480:intron 30.0%
! ACATGCTTTTGCATTTATAC+TGG - chr5_2:20685702-20685721 Msa0762480:intron 30.0%
TTTGTAATTGTACCATCATG+TGG - chr5_2:20685801-20685820 Msa0762480:intron 30.0%
! TTAAAGTACTTAAGAGTCCA+TGG - chr5_2:20685839-20685858 Msa0762480:intron 30.0%
TCATAGATCATAACATACCA+TGG + chr5_2:20685859-20685878 None:intergenic 30.0%
TAAGATTTGGAAAGATAGGA+TGG + chr5_2:20685895-20685914 None:intergenic 30.0%
TTAATCCAACGGATAAGATT+TGG + chr5_2:20685908-20685927 None:intergenic 30.0%
CAACTGTTAGATTAATCCAA+CGG + chr5_2:20685919-20685938 None:intergenic 30.0%
AAAACATTATATTGCAGCAG+CGG + chr5_2:20686050-20686069 None:intergenic 30.0%
!! GCTGCAATATAATGTTTTAG+AGG - chr5_2:20686052-20686071 Msa0762480:intron 30.0%
AAAAATCAGTAAGATTGCAG+TGG - chr5_2:20686146-20686165 Msa0762480:intron 30.0%
CCAACCAAAATAATTCAAAG+AGG + chr5_2:20686279-20686298 None:intergenic 30.0%
!!! CCTCTTTGAATTATTTTGGT+TGG - chr5_2:20686276-20686295 Msa0762480:intron 30.0%
! TTAATCGACTCATAGTCTAA+GGG + chr5_2:20686382-20686401 None:intergenic 30.0%
! ATTAATCGACTCATAGTCTA+AGG + chr5_2:20686383-20686402 None:intergenic 30.0%
GATTAATGAAAACGTGAAGA+AGG - chr5_2:20686396-20686415 Msa0762480:CDS 30.0%
ATGAAAGGATTTCAATGATC+AGG + chr5_2:20686575-20686594 None:intergenic 30.0%
TGTAACTTGAAGACTGTTAT+TGG - chr5_2:20686629-20686648 Msa0762480:intron 30.0%
! CATAGATTCTCATGCATTTT+TGG - chr5_2:20686660-20686679 Msa0762480:intron 30.0%
!! AGTCTATAACTTGTTCAACA+GGG + chr5_2:20686704-20686723 None:intergenic 30.0%
!! AAGTCTATAACTTGTTCAAC+AGG + chr5_2:20686705-20686724 None:intergenic 30.0%
AATGGTAGTATGTTACACTT+TGG - chr5_2:20686743-20686762 Msa0762480:intron 30.0%
ATGGTAGTATGTTACACTTT+GGG - chr5_2:20686744-20686763 Msa0762480:intron 30.0%
GGAAAAATCTAATCAATGCA+CGG - chr5_2:20686792-20686811 Msa0762480:intron 30.0%
ATACTTATATTCTTGTCGAC+TGG - chr5_2:20687029-20687048 Msa0762480:intron 30.0%
!! TAAAGGTACCTCAAAATGTA+TGG + chr5_2:20687785-20687804 None:intergenic 30.0%
TGCTTAGGAAAGAAAAACAA+AGG + chr5_2:20687836-20687855 None:intergenic 30.0%
!! CCTTAAGATTTTGGTATAGT+TGG + chr5_2:20687943-20687962 None:intergenic 30.0%
CCAACTATACCAAAATCTTA+AGG - chr5_2:20687940-20687959 Msa0762480:intron 30.0%
TGTAATAGAGAGACAATGTA+AGG + chr5_2:20688133-20688152 None:intergenic 30.0%
! TTACTAATTGAACCAGCTTT+TGG + chr5_2:20688417-20688436 None:intergenic 30.0%
AGAATTGGAAAAATGCTACA+GGG + chr5_2:20688635-20688654 None:intergenic 30.0%
AAGAATTGGAAAAATGCTAC+AGG + chr5_2:20688636-20688655 None:intergenic 30.0%
TCTGTTATAACGAGAAGAAT+TGG + chr5_2:20688650-20688669 None:intergenic 30.0%
TGGAGCATAAATAAATACCT+TGG + chr5_2:20688820-20688839 None:intergenic 30.0%
AGTAGAAAAAATTGTGAGTG+TGG + chr5_2:20688840-20688859 None:intergenic 30.0%
ATGTTCAGTTTCCAATTTGT+TGG - chr5_2:20688892-20688911 Msa0762480:CDS 30.0%
! TGTTCAGTTTCCAATTTGTT+GGG - chr5_2:20688893-20688912 Msa0762480:CDS 30.0%
! GTAATATAGTCTGTTTCTTC+CGG - chr5_2:20689038-20689057 Msa0762480:intron 30.0%
! AATCTGGCAATAAAAAGTGT+TGG + chr5_2:20689107-20689126 None:intergenic 30.0%
!! CACTTTTTATTGCCAGATTA+TGG - chr5_2:20689108-20689127 Msa0762480:CDS 30.0%
CTCTTAAATTCTCTTCACTA+AGG + chr5_2:20689448-20689467 None:intergenic 30.0%
TAGTGAAGAGAATTTAAGAG+AGG - chr5_2:20689448-20689467 Msa0762480:intron 30.0%
!! GAAGAAAATTTAGTCTTGCT+TGG - chr5_2:20689488-20689507 Msa0762480:intron 30.0%
CATCCTGATATATATTTGTC+TGG + chr5_2:20689526-20689545 None:intergenic 30.0%
! TGAAGCAAAACATACCTTTT+TGG + chr5_2:20689567-20689586 None:intergenic 30.0%
!! TTTGCACAAAAAGGTTTTGA+TGG - chr5_2:20689646-20689665 Msa0762480:intron 30.0%
!! CAAAAAGGTTTTGATGGATA+TGG - chr5_2:20689652-20689671 Msa0762480:intron 30.0%
!! AAAAGGTTTTGATGGATATG+GGG - chr5_2:20689654-20689673 Msa0762480:intron 30.0%
CTTAAATTTCAGTACAAGGT+AGG + chr5_2:20690006-20690025 None:intergenic 30.0%
ATGGAGTTCAAATTCCTTTA+GGG + chr5_2:20690369-20690388 None:intergenic 30.0%
AGTTAAACTTTGAACCTCAA+GGG + chr5_2:20690392-20690411 None:intergenic 30.0%
!! CGAACTGAATATTTTTGCTA+TGG - chr5_2:20690464-20690483 Msa0762480:intron 30.0%
AATATTTGTGCTGGAACATT+TGG + chr5_2:20690682-20690701 None:intergenic 30.0%
TAACTCACAAATATTTGTGC+TGG + chr5_2:20690691-20690710 None:intergenic 30.0%
! TAGCACTTATGTTTTTCTGT+CGG - chr5_2:20690709-20690728 Msa0762480:intron 30.0%
TGTAGAACATAGGTAAAAAC+GGG + chr5_2:20690787-20690806 None:intergenic 30.0%
CTGTAGAACATAGGTAAAAA+CGG + chr5_2:20690788-20690807 None:intergenic 30.0%
! TTTTACCTATGTTCTACAGA+TGG - chr5_2:20690789-20690808 Msa0762480:intron 30.0%
TTTACCTATGTTCTACAGAT+GGG - chr5_2:20690790-20690809 Msa0762480:intron 30.0%
TAAGAAATATCTCCAGGTTT+GGG + chr5_2:20690832-20690851 None:intergenic 30.0%
! GTTAACTTCCATTTTCTGTA+GGG - chr5_2:20690928-20690947 Msa0762480:intron 30.0%
TATGACTTAGATCAGACATT+TGG + chr5_2:20691189-20691208 None:intergenic 30.0%
TCATAAAAAGAAGGCTCTTT+AGG - chr5_2:20691204-20691223 Msa0762480:intron 30.0%
TCATGTTACAGCAACATTAT+TGG - chr5_2:20691398-20691417 Msa0762480:intron 30.0%
TATTTGAGGGAATGAATACA+TGG + chr5_2:20691475-20691494 None:intergenic 30.0%
AATAAGCTGAAATCAGCTAA+TGG + chr5_2:20691813-20691832 None:intergenic 30.0%
! GTGAAGTATTAGGTCATATT+TGG + chr5_2:20692002-20692021 None:intergenic 30.0%
!!! GTACAAGTCTTTTAAAACAG+AGG + chr5_2:20692108-20692127 None:intergenic 30.0%
AAGAAAACCAATAGAACGTA+CGG + chr5_2:20692478-20692497 None:intergenic 30.0%
TTTGTGCTAAACTTTGTGTA+GGG - chr5_2:20692518-20692537 Msa0762480:intron 30.0%
GTAATATAGTTGTCCTCAAA+TGG + chr5_2:20692548-20692567 None:intergenic 30.0%
TTGAAACTATCCATAATAGC+AGG + chr5_2:20692588-20692607 None:intergenic 30.0%
! ATGGGATCAATTGAACTTTT+TGG + chr5_2:20692681-20692700 None:intergenic 30.0%
TTGTCAGTGATATATAGAGA+AGG + chr5_2:20692740-20692759 None:intergenic 30.0%
GGCACAACATATAATAATAC+AGG + chr5_2:20692792-20692811 None:intergenic 30.0%
TATTATATGTTGTGCCATGA+TGG - chr5_2:20692796-20692815 Msa0762480:five_prime_UTR 30.0%
! TGTCCTGTGTTTTACAAATA+TGG - chr5_2:20692882-20692901 Msa0762480:five_prime_UTR 30.0%
! ATAAGGTTGAAGCTTTTCTT+AGG + chr5_2:20693017-20693036 None:intergenic 30.0%
CAGAAAACCTATATTGTGTA+AGG - chr5_2:20693122-20693141 Msa0762480:five_prime_UTR 30.0%
ACAATGTCCTTACACAATAT+AGG + chr5_2:20693132-20693151 None:intergenic 30.0%
GTGGTTCATGTTTGTTTGTT+TGG + chr5_2:20684816-20684835 None:intergenic 35.0%
!!! GATGTGTCATTTTCTTTTGG+TGG + chr5_2:20684840-20684859 None:intergenic 35.0%
!!! GGAGATGTGTCATTTTCTTT+TGG + chr5_2:20684843-20684862 None:intergenic 35.0%
GTCAATAGATAACAAGGCAT+TGG + chr5_2:20684901-20684920 None:intergenic 35.0%
!! TACACTTGTTGTTTCTCACT+CGG - chr5_2:20685153-20685172 Msa0762480:three_prime_UTR 35.0%
GGTCATTTGATCATGTTACA+TGG + chr5_2:20685229-20685248 None:intergenic 35.0%
! TGTTTGTTCACCTCCTTTTT+CGG - chr5_2:20685426-20685445 Msa0762480:intron 35.0%
AACTGCAAAGAAACCGAAAA+AGG + chr5_2:20685442-20685461 None:intergenic 35.0%
AACTGTTGAACAACGAACAA+AGG - chr5_2:20685617-20685636 Msa0762480:intron 35.0%
! AAAGGTTCAATCTGAAGTGT+CGG - chr5_2:20685635-20685654 Msa0762480:intron 35.0%
CGGATAAGATTTGGAAAGAT+AGG + chr5_2:20685899-20685918 None:intergenic 35.0%
TCTTTCCAAATCTTATCCGT+TGG - chr5_2:20685900-20685919 Msa0762480:intron 35.0%
! TCTAACAGTTGAGATTTTGC+TGG - chr5_2:20685928-20685947 Msa0762480:intron 35.0%
! ATTTTGCTGGAGAGACATAA+GGG - chr5_2:20685941-20685960 Msa0762480:intron 35.0%
ACCATGTTGTGTATGATTGT+AGG - chr5_2:20685973-20685992 Msa0762480:intron 35.0%
TCCTACAATCATACACAACA+TGG + chr5_2:20685977-20685996 None:intergenic 35.0%
CAGTGTTAGATCTTACTAGA+CGG - chr5_2:20686235-20686254 Msa0762480:intron 35.0%
ACATACTACCATTACCATGA+TGG + chr5_2:20686736-20686755 None:intergenic 35.0%
GATATTATGAAGCACGGATA+CGG + chr5_2:20686966-20686985 None:intergenic 35.0%
CTTGTTAAATTTCAAGCAGC+TGG + chr5_2:20687006-20687025 None:intergenic 35.0%
TTAGGATCATCAAGTAGGAA+TGG + chr5_2:20687486-20687505 None:intergenic 35.0%
! GACTATGACCATACATTTTG+AGG - chr5_2:20687774-20687793 Msa0762480:intron 35.0%
! TGAGGTACCTTTAATATCTG+CGG - chr5_2:20687792-20687811 Msa0762480:intron 35.0%
GAAAACTCCGCAGATATTAA+AGG + chr5_2:20687802-20687821 None:intergenic 35.0%
TGGAGCATGAGAAAATACAT+AGG - chr5_2:20688292-20688311 Msa0762480:intron 35.0%
ATGTGACTTTGAACACAATG+TGG + chr5_2:20688324-20688343 None:intergenic 35.0%
! TTATTAGAATGGTGGCGAAA+AGG - chr5_2:20688346-20688365 Msa0762480:CDS 35.0%
AATCCAACTATTCCAAAAGC+TGG - chr5_2:20688402-20688421 Msa0762480:CDS 35.0%
TCTATGTGATAGATTGCAAG+TGG + chr5_2:20688508-20688527 None:intergenic 35.0%
AGCAACGATTGCTATATTGT+AGG - chr5_2:20688718-20688737 Msa0762480:CDS 35.0%
!! AGTTTCCAATTTGTTGGGAA+AGG - chr5_2:20688898-20688917 Msa0762480:CDS 35.0%
AATCACCTTTCCCAACAAAT+TGG + chr5_2:20688906-20688925 None:intergenic 35.0%
TCAGTAAGATAGATGAACTC+TGG + chr5_2:20688957-20688976 None:intergenic 35.0%
GAGTTCATCTATCTTACTGA+TGG - chr5_2:20688957-20688976 Msa0762480:intron 35.0%
AATACTATAATCAGAGGCGA+AGG - chr5_2:20689008-20689027 Msa0762480:intron 35.0%
! ATGTGACTACAGAAAAGTAC+CGG + chr5_2:20689060-20689079 None:intergenic 35.0%
ACTTCGAAAATCAGTTAGAG+AGG - chr5_2:20689240-20689259 Msa0762480:intron 35.0%
! TTTTGACCAGGTTAAAGCAA+TGG - chr5_2:20689388-20689407 Msa0762480:intron 35.0%
!! ACCTTTTTGGCACTAATGAA+GGG + chr5_2:20689554-20689573 None:intergenic 35.0%
!! TACCTTTTTGGCACTAATGA+AGG + chr5_2:20689555-20689574 None:intergenic 35.0%
!!! AAAGGGTATTTTGGTGAATG+TGG - chr5_2:20689725-20689744 Msa0762480:intron 35.0%
ATTATGAAGAGACAAACCTC+TGG + chr5_2:20689788-20689807 None:intergenic 35.0%
TATTCATAAAGCGTAAGCTG+TGG - chr5_2:20689890-20689909 Msa0762480:intron 35.0%
TAGAAAAATGAGAGCAAGCA+AGG - chr5_2:20690033-20690052 Msa0762480:intron 35.0%
GGATCAAACTCTAGACTATA+CGG - chr5_2:20690054-20690073 Msa0762480:intron 35.0%
AACAGCTTAAACTTGTGAGA+TGG + chr5_2:20690085-20690104 None:intergenic 35.0%
GATGGTTGTAAAACGATCAT+TGG + chr5_2:20690347-20690366 None:intergenic 35.0%
! AGTTCAAATTCCTTTAGGGA+TGG + chr5_2:20690365-20690384 None:intergenic 35.0%
GATGGAGTTCAAATTCCTTT+AGG + chr5_2:20690370-20690389 None:intergenic 35.0%
GAGTTAAACTTTGAACCTCA+AGG + chr5_2:20690393-20690412 None:intergenic 35.0%
GTAGCTACAGCAAAAATTGA+AGG + chr5_2:20690577-20690596 None:intergenic 35.0%
ACAGTCTGCAAAAGAAAATG+AGG + chr5_2:20690622-20690641 None:intergenic 35.0%
ACATAGGTAAAAACGGGAAA+GGG + chr5_2:20690781-20690800 None:intergenic 35.0%
AACATAGGTAAAAACGGGAA+AGG + chr5_2:20690782-20690801 None:intergenic 35.0%
GTAAGAAATATCTCCAGGTT+TGG + chr5_2:20690833-20690852 None:intergenic 35.0%
TTGTCGTAAGAAATATCTCC+AGG + chr5_2:20690838-20690857 None:intergenic 35.0%
! GGTTAACTTCCATTTTCTGT+AGG - chr5_2:20690927-20690946 Msa0762480:intron 35.0%
GAATACAACCCTACAGAAAA+TGG + chr5_2:20690939-20690958 None:intergenic 35.0%
TAACACAATACTCACACATG+TGG + chr5_2:20691069-20691088 None:intergenic 35.0%
CTTCAAATCAAATGTGCATC+TGG + chr5_2:20691119-20691138 None:intergenic 35.0%
AATCACTAAGAAGAAGAGCA+AGG - chr5_2:20691278-20691297 Msa0762480:intron 35.0%
GTTGTTTGCAATTTCACAGA+AGG - chr5_2:20691334-20691353 Msa0762480:intron 35.0%
TGCTGTAACATGAGAATACA+TGG + chr5_2:20691391-20691410 None:intergenic 35.0%
! GCAACATTATTGGACTGTTT+TGG - chr5_2:20691408-20691427 Msa0762480:intron 35.0%
TGGATCAATAATGGTTTACC+AGG + chr5_2:20691434-20691453 None:intergenic 35.0%
!!! TGATCCATTGAGTTTTGTTC+AGG - chr5_2:20691447-20691466 Msa0762480:CDS 35.0%
!!! TTGGTGGCAGTTTTATTTGA+GGG + chr5_2:20691488-20691507 None:intergenic 35.0%
!!! TTTGGTGGCAGTTTTATTTG+AGG + chr5_2:20691489-20691508 None:intergenic 35.0%
!!! TTAGCAGTCTCTAAAGCTTT+TGG + chr5_2:20691507-20691526 None:intergenic 35.0%
! TTACTACTGTCTCAAGCTTT+TGG - chr5_2:20691551-20691570 Msa0762480:intron 35.0%
!! CTTATTTTCATAAGCTCTCC+AGG - chr5_2:20691827-20691846 Msa0762480:intron 35.0%
!!! AGTCTTTTAAAACAGAGGCA+AGG + chr5_2:20692103-20692122 None:intergenic 35.0%
! AAGGCTTCAGAAGACATTTT+CGG + chr5_2:20692184-20692203 None:intergenic 35.0%
!! AGCAAAGATCGTTTTTCGAA+AGG + chr5_2:20692226-20692245 None:intergenic 35.0%
CTTTGTGCTAAACTTTGTGT+AGG - chr5_2:20692517-20692536 Msa0762480:intron 35.0%
!!! AGGAGGGTATGTTTTTTGAT+GGG + chr5_2:20692699-20692718 None:intergenic 35.0%
!!! AAGGAGGGTATGTTTTTTGA+TGG + chr5_2:20692700-20692719 None:intergenic 35.0%
AAGATGATTGTTTGCCATCA+TGG + chr5_2:20692813-20692832 None:intergenic 35.0%
TCTTAGGACTTGTAAAACAC+AGG + chr5_2:20693001-20693020 None:intergenic 35.0%
TCGTCATCTCCCAAATAATA+AGG + chr5_2:20693034-20693053 None:intergenic 35.0%
!! GTCATTTTCTTTTGGTGGAG+TGG + chr5_2:20684835-20684854 None:intergenic 40.0%
TACCCTTTAAGCCTAAAGCT+AGG - chr5_2:20684923-20684942 Msa0762480:three_prime_UTR 40.0%
!! TGATTTTGTGGCCTAGCTTT+AGG + chr5_2:20684937-20684956 None:intergenic 40.0%
TGCAAAGAAACCGAAAAAGG+AGG + chr5_2:20685439-20685458 None:intergenic 40.0%
ATAGACACAACATCGATACG+TGG - chr5_2:20685523-20685542 Msa0762480:intron 40.0%
GTTCAACAGTTATCAGACAC+CGG + chr5_2:20685608-20685627 None:intergenic 40.0%
!!! CTGTGCATAGGTTTTGAGTT+GGG - chr5_2:20685658-20685677 Msa0762480:intron 40.0%
!!! TGTGCATAGGTTTTGAGTTG+GGG - chr5_2:20685659-20685678 Msa0762480:intron 40.0%
ACACAGCATATTCCACATGA+TGG + chr5_2:20685816-20685835 None:intergenic 40.0%
! GATTTTGCTGGAGAGACATA+AGG - chr5_2:20685940-20685959 Msa0762480:intron 40.0%
! CGGACCGCAATTTAAAACTA+TGG + chr5_2:20686030-20686049 None:intergenic 40.0%
!! ATCTGCTTGACTTGCACTTA+TGG - chr5_2:20686526-20686545 Msa0762480:intron 40.0%
!! TCTGCTTGACTTGCACTTAT+GGG - chr5_2:20686527-20686546 Msa0762480:intron 40.0%
AGACTTTAGCATTGCCATCA+TGG - chr5_2:20686719-20686738 Msa0762480:intron 40.0%
TAGCATTGCCATCATGGTAA+TGG - chr5_2:20686725-20686744 Msa0762480:intron 40.0%
TCTCAAATTATCAGCGGTGT+CGG - chr5_2:20686912-20686931 Msa0762480:intron 40.0%
CAACGTTAGGATCATCAAGT+AGG + chr5_2:20687491-20687510 None:intergenic 40.0%
! CTACTTGATGATCCTAACGT+TGG - chr5_2:20687489-20687508 Msa0762480:intron 40.0%
GCAGTATCTCTCATTCACAT+CGG - chr5_2:20687548-20687567 Msa0762480:intron 40.0%
CAGTATCTCTCATTCACATC+GGG - chr5_2:20687549-20687568 Msa0762480:intron 40.0%
GTGTTTGGCTAGTAGACATT+TGG + chr5_2:20688177-20688196 None:intergenic 40.0%
GTTCCTAAGTTGTTAGCTGA+TGG - chr5_2:20688237-20688256 Msa0762480:intron 40.0%
GATCCATCAGCTAACAACTT+AGG + chr5_2:20688243-20688262 None:intergenic 40.0%
!! GTTGACGTTTTGGTCATAGA+GGG - chr5_2:20688368-20688387 Msa0762480:CDS 40.0%
!!! GAACCAGCTTTTGGAATAGT+TGG + chr5_2:20688408-20688427 None:intergenic 40.0%
CAAGCTAGAACAATCTTGCT+AGG + chr5_2:20688558-20688577 None:intergenic 40.0%
AAGTGGCAGAGTTTATACAG+AGG - chr5_2:20688782-20688801 Msa0762480:intron 40.0%
CTCTGGATCACTACAAATAG+AGG + chr5_2:20688940-20688959 None:intergenic 40.0%
CAATTGTTGCAGAGTAGAGT+GGG + chr5_2:20689150-20689169 None:intergenic 40.0%
TCTGCAACAATTGCTCTTCT+TGG - chr5_2:20689157-20689176 Msa0762480:intron 40.0%
TGATCACCATTGCTTTAACC+TGG + chr5_2:20689397-20689416 None:intergenic 40.0%
GCAATGGTGATCATAAATCC+TGG - chr5_2:20689404-20689423 Msa0762480:intron 40.0%
ATAAATCCTGGAAACCCTAC+TGG - chr5_2:20689416-20689435 Msa0762480:intron 40.0%
AATTCTCTTCACTAAGGCAC+TGG + chr5_2:20689442-20689461 None:intergenic 40.0%
!! TTTAGTCTTGCTTGGAGATG+AGG - chr5_2:20689496-20689515 Msa0762480:intron 40.0%
ACCCTTCATTAGTGCCAAAA+AGG - chr5_2:20689550-20689569 Msa0762480:intron 40.0%
CTGAGTGAAAAGAAACAAGC+TGG + chr5_2:20689700-20689719 None:intergenic 40.0%
!! TCTTTTCACTCAGTGTCGAA+AGG - chr5_2:20689707-20689726 Msa0762480:intron 40.0%
!! CTTTTCACTCAGTGTCGAAA+GGG - chr5_2:20689708-20689727 Msa0762480:intron 40.0%
!!! TCAGTGTCGAAAGGGTATTT+TGG - chr5_2:20689716-20689735 Msa0762480:intron 40.0%
TTTCTTGCTGAGTGTTAAGC+TGG - chr5_2:20689822-20689841 Msa0762480:intron 40.0%
TCCAAGTTTCAAGCTCTGTA+GGG + chr5_2:20689967-20689986 None:intergenic 40.0%
ATCCAAGTTTCAAGCTCTGT+AGG + chr5_2:20689968-20689987 None:intergenic 40.0%
AATTTCAGTACAAGGTAGGG+TGG + chr5_2:20690002-20690021 None:intergenic 40.0%
! CGTTTTACAACCATCCCTAA+AGG - chr5_2:20690352-20690371 Msa0762480:CDS 40.0%
AATTTGAACTCCATCCCTTG+AGG - chr5_2:20690375-20690394 Msa0762480:CDS 40.0%
AAACTTTGAACCTCAAGGGA+TGG + chr5_2:20690388-20690407 None:intergenic 40.0%
TGCCTGTTGTCTAGACATAT+AGG - chr5_2:20690509-20690528 Msa0762480:intron 40.0%
GTCCTATATGTCTAGACAAC+AGG + chr5_2:20690514-20690533 None:intergenic 40.0%
CACTTGCATGTTAAGTCAGA+TGG + chr5_2:20690536-20690555 None:intergenic 40.0%
TAGTCCCATCTGTAGAACAT+AGG + chr5_2:20690797-20690816 None:intergenic 40.0%
!! ACGACAAATTTGTTAGGGAG+AGG - chr5_2:20690851-20690870 Msa0762480:intron 40.0%
!!! ATTATTGGACTGTTTTGGCC+TGG - chr5_2:20691413-20691432 Msa0762480:intron 40.0%
!! AGCTTTAGAGACTGCTAAAC+AGG - chr5_2:20691509-20691528 Msa0762480:CDS 40.0%
TCAGGATTTGGACAGAAAGA+AGG - chr5_2:20691603-20691622 Msa0762480:intron 40.0%
CAGGATTTGGACAGAAAGAA+GGG - chr5_2:20691604-20691623 Msa0762480:intron 40.0%
ATCCAAACAGACCCTTAGAA+TGG + chr5_2:20691710-20691729 None:intergenic 40.0%
AATAGAACGTACGGTCTGAT+TGG + chr5_2:20692469-20692488 None:intergenic 40.0%
AATCAGACCGTACGTTCTAT+TGG - chr5_2:20692468-20692487 Msa0762480:intron 40.0%
! TGTGTAGGGTTTTCCATTTG+AGG - chr5_2:20692532-20692551 Msa0762480:intron 40.0%
GACAACTATATTACCAGCTG+AGG - chr5_2:20692554-20692573 Msa0762480:intron 40.0%
GGAAGAAATGCCTGCTATTA+TGG - chr5_2:20692575-20692594 Msa0762480:intron 40.0%
GAACAATATGATGACCACAG+AGG - chr5_2:20692630-20692649 Msa0762480:intron 40.0%
ATGACCACAGAGGTTATTCA+AGG - chr5_2:20692640-20692659 Msa0762480:intron 40.0%
ACAACCTTGAATAACCTCTG+TGG + chr5_2:20692647-20692666 None:intergenic 40.0%
TAGGACTTGTAAAACACAGG+AGG + chr5_2:20692998-20693017 None:intergenic 40.0%
!! GGCCTAGCTTTAGGCTTAAA+GGG + chr5_2:20684928-20684947 None:intergenic 45.0%
!! TGGCCTAGCTTTAGGCTTAA+AGG + chr5_2:20684929-20684948 None:intergenic 45.0%
!!! GCTGTGCATAGGTTTTGAGT+TGG - chr5_2:20685657-20685676 Msa0762480:intron 45.0%
!!! GTGCATAGGTTTTGAGTTGG+GGG - chr5_2:20685660-20685679 Msa0762480:intron 45.0%
! TCATAGTCTAAGGGCTTTGG+TGG + chr5_2:20686373-20686392 None:intergenic 45.0%
GACTCATAGTCTAAGGGCTT+TGG + chr5_2:20686376-20686395 None:intergenic 45.0%
!! CTTGACTTGCACTTATGGGT+TGG - chr5_2:20686531-20686550 Msa0762480:intron 45.0%
!! TGCACTTATGGGTTGGTTGA+AGG - chr5_2:20686538-20686557 Msa0762480:intron 45.0%
ATCAATGCACGGACACTTCT+CGG - chr5_2:20686803-20686822 Msa0762480:intron 45.0%
TTTCAAGCAGCTGGAGAGTA+TGG + chr5_2:20686997-20687016 None:intergenic 45.0%
TGTTGGAAACCCACATGCTT+TGG - chr5_2:20687236-20687255 Msa0762480:CDS 45.0%
GTTGGAAACCCACATGCTTT+GGG - chr5_2:20687237-20687256 Msa0762480:CDS 45.0%
GTTTCTGTCCCAAAGCATGT+GGG + chr5_2:20687248-20687267 None:intergenic 45.0%
TATGGTAGTTGTGCTGAACC+TGG + chr5_2:20687287-20687306 None:intergenic 45.0%
AGCTCTTGCAATTGCATCAG+CGG + chr5_2:20687526-20687545 None:intergenic 45.0%
TATCTCTCATTCACATCGGG+TGG - chr5_2:20687552-20687571 Msa0762480:intron 45.0%
TCATTCACATCGGGTGGTTT+AGG - chr5_2:20687558-20687577 Msa0762480:intron 45.0%
GGCTAGTAGACATTTGGTCA+TGG + chr5_2:20688171-20688190 None:intergenic 45.0%
AGTGGTTCATAAGTGCCCTA+AGG - chr5_2:20688266-20688285 Msa0762480:intron 45.0%
TCATAAGTGCCCTAAGGCTT+TGG - chr5_2:20688272-20688291 Msa0762480:intron 45.0%
TCTCATGCTCCAAAGCCTTA+GGG + chr5_2:20688284-20688303 None:intergenic 45.0%
TTCTCATGCTCCAAAGCCTT+AGG + chr5_2:20688285-20688304 None:intergenic 45.0%
! TGGCGAAAAGGTTGACGTTT+TGG - chr5_2:20688358-20688377 Msa0762480:CDS 45.0%
!! GGTTGACGTTTTGGTCATAG+AGG - chr5_2:20688367-20688386 Msa0762480:CDS 45.0%
GGTGCTTATAGTGATTCTCG+AGG - chr5_2:20688739-20688758 Msa0762480:CDS 45.0%
! GAGTTTATACAGAGGCGTGA+TGG - chr5_2:20688790-20688809 Msa0762480:intron 45.0%
ATAATCAGAGGCGAAGGAGA+TGG - chr5_2:20689014-20689033 Msa0762480:intron 45.0%
TAATCAGAGGCGAAGGAGAT+GGG - chr5_2:20689015-20689034 Msa0762480:intron 45.0%
! CAGAGTAGAGTGGGTATTGT+GGG + chr5_2:20689141-20689160 None:intergenic 45.0%
GCAATTGTTGCAGAGTAGAG+TGG + chr5_2:20689151-20689170 None:intergenic 45.0%
GCAACAATTGCTCTTCTTGG+TGG - chr5_2:20689160-20689179 Msa0762480:intron 45.0%
ACCTCGAAGAGACAGCAAAT+TGG - chr5_2:20689200-20689219 Msa0762480:intron 45.0%
CCTCGAAGAGACAGCAAATT+GGG - chr5_2:20689201-20689220 Msa0762480:intron 45.0%
CTCGAAGAGACAGCAAATTG+GGG - chr5_2:20689202-20689221 Msa0762480:intron 45.0%
GTTAGAGAGGCTCGCTATAA+AGG - chr5_2:20689253-20689272 Msa0762480:intron 45.0%
TGGACTTCCTTGCTTAAAGG+TGG + chr5_2:20689680-20689699 None:intergenic 45.0%
AGCTGGACTTCCTTGCTTAA+AGG + chr5_2:20689683-20689702 None:intergenic 45.0%
AATGACCAACATTCCTCCAG+AGG - chr5_2:20689769-20689788 Msa0762480:intron 45.0%
! ACAAACCTCTGGAGGAATGT+TGG + chr5_2:20689777-20689796 None:intergenic 45.0%
ATGAAGAGACAAACCTCTGG+AGG + chr5_2:20689785-20689804 None:intergenic 45.0%
TCCCTACAGAGCTTGAAACT+TGG - chr5_2:20689963-20689982 Msa0762480:intron 45.0%
CCATTGAGAAGCTCAAGTCA+CGG - chr5_2:20690184-20690203 Msa0762480:intron 45.0%
TTCATGATGTCTCAGCTCAG+TGG + chr5_2:20690419-20690438 None:intergenic 45.0%
AGGGTGAGGAAAAGGAGATA+GGG + chr5_2:20690762-20690781 None:intergenic 45.0%
AAGGGTGAGGAAAAGGAGAT+AGG + chr5_2:20690763-20690782 None:intergenic 45.0%
ATGATCAATCCACCCAAACC+TGG - chr5_2:20690817-20690836 Msa0762480:intron 45.0%
GAAATATCTCCAGGTTTGGG+TGG + chr5_2:20690829-20690848 None:intergenic 45.0%
AGTTAAACATGTGCCCGTGT+CGG + chr5_2:20691009-20691028 None:intergenic 45.0%
TAGTGTCCGATACTGACACA+TGG - chr5_2:20691087-20691106 Msa0762480:intron 45.0%
TGTCTGCCATGTGTCAGTAT+CGG + chr5_2:20691096-20691115 None:intergenic 45.0%
AGAGCAAGGATCATGACTGA+TGG - chr5_2:20691292-20691311 Msa0762480:intron 45.0%
GGCACCTGAACAAAACTCAA+TGG + chr5_2:20691454-20691473 None:intergenic 45.0%
!!! GCAGTCTCTAAAGCTTTTGG+TGG + chr5_2:20691504-20691523 None:intergenic 45.0%
TTAGAGACTGCTAAACAGGC+TGG - chr5_2:20691513-20691532 Msa0762480:CDS 45.0%
CAAACAGACCCTTAGAATGG+TGG + chr5_2:20691707-20691726 None:intergenic 45.0%
! CACCATTCTAAGGGTCTGTT+TGG - chr5_2:20691705-20691724 Msa0762480:intron 45.0%
ACTAAGTGGAGTCAGCTACA+TGG + chr5_2:20692939-20692958 None:intergenic 45.0%
! ATGTAGCTGACTCCACTTAG+TGG - chr5_2:20692938-20692957 Msa0762480:five_prime_UTR 45.0%
! TGTAGCTGACTCCACTTAGT+GGG - chr5_2:20692939-20692958 Msa0762480:five_prime_UTR 45.0%
TGACTCCACTTAGTGGGATA+AGG - chr5_2:20692945-20692964 Msa0762480:five_prime_UTR 45.0%
! CAAAGCCTTATCCCACTAAG+TGG + chr5_2:20692953-20692972 None:intergenic 45.0%
GACTTGTAAAACACAGGAGG+AGG + chr5_2:20692995-20693014 None:intergenic 45.0%
!!! AAATATTTTAAATTAACTTA+GGG + chr5_2:20686175-20686194 None:intergenic 5.0%
!!! TAAATATTTTAAATTAACTT+AGG + chr5_2:20686176-20686195 None:intergenic 5.0%
AACAGTTATCAGACACCGGC+AGG + chr5_2:20685604-20685623 None:intergenic 50.0%
AAGGCTCAGTATGCTGTCAG+AGG - chr5_2:20686415-20686434 Msa0762480:CDS 50.0%
!! TTTGCCCTCCTTCTGAAGCT+CGG + chr5_2:20686461-20686480 None:intergenic 50.0%
GCTTCAGAAGGAGGGCAAAA+AGG - chr5_2:20686462-20686481 Msa0762480:intron 50.0%
ATACGGACACGGACACGATA+CGG + chr5_2:20686949-20686968 None:intergenic 50.0%
ATGAAGCACGGATACGGACA+CGG + chr5_2:20686960-20686979 None:intergenic 50.0%
GGTTTCTGTCCCAAAGCATG+TGG + chr5_2:20687249-20687268 None:intergenic 50.0%
CATCAAGTAGGAATGGAGCC+TGG + chr5_2:20687479-20687498 None:intergenic 50.0%
GGGAATAGCAGTCCAACGTT+AGG + chr5_2:20687504-20687523 None:intergenic 50.0%
CTCTTGCAATTGCATCAGCG+GGG + chr5_2:20687524-20687543 None:intergenic 50.0%
GCTCTTGCAATTGCATCAGC+GGG + chr5_2:20687525-20687544 None:intergenic 50.0%
! GTTAGCTGATGGATCGTGAG+TGG - chr5_2:20688248-20688267 Msa0762480:intron 50.0%
! AGAGGCGTGATGGTTATCCA+AGG - chr5_2:20688800-20688819 Msa0762480:intron 50.0%
! TCTTACTGATGGTGCGAGCA+AGG - chr5_2:20688968-20688987 Msa0762480:intron 50.0%
AATCAGAGGCGAAGGAGATG+GGG - chr5_2:20689016-20689035 Msa0762480:intron 50.0%
GTGGGACTGGAACCATAATC+TGG + chr5_2:20689123-20689142 None:intergenic 50.0%
! TAGAGTGGGTATTGTGGGAC+TGG + chr5_2:20689136-20689155 None:intergenic 50.0%
! GCAGAGTAGAGTGGGTATTG+TGG + chr5_2:20689142-20689161 None:intergenic 50.0%
GCTGTCTCTTCGAGGTAGTA+TGG + chr5_2:20689196-20689215 None:intergenic 50.0%
!! CCCAATTTGCTGTCTCTTCG+AGG + chr5_2:20689204-20689223 None:intergenic 50.0%
TATGGGGCCACCTTTAAGCA+AGG - chr5_2:20689670-20689689 Msa0762480:intron 50.0%
CCGTGACTTGAGCTTCTCAA+TGG + chr5_2:20690187-20690206 None:intergenic 50.0%
AACGGGAAAGGGTGAGGAAA+AGG + chr5_2:20690770-20690789 None:intergenic 50.0%
GGTAAAAACGGGAAAGGGTG+AGG + chr5_2:20690776-20690795 None:intergenic 50.0%
CTCCGAACACAATACCGACA+CGG - chr5_2:20690992-20691011 Msa0762480:intron 50.0%
TCCGAACACAATACCGACAC+GGG - chr5_2:20690993-20691012 Msa0762480:intron 50.0%
!! CTGATGGATTCAACAGCTGC+AGG - chr5_2:20691308-20691327 Msa0762480:intron 50.0%
!! CTCAAGCTTTTGGAAGCCAC+TGG - chr5_2:20691561-20691580 Msa0762480:intron 50.0%
AGGAACAGTGGATATGCCAG+TGG + chr5_2:20691580-20691599 None:intergenic 50.0%
ACTGGCATATCCACTGTTCC+TGG - chr5_2:20691579-20691598 Msa0762480:intron 50.0%
ATATCCACTGTTCCTGGCTC+AGG - chr5_2:20691585-20691604 Msa0762480:intron 50.0%
AAATCCTGAGCCAGGAACAG+TGG + chr5_2:20691592-20691611 None:intergenic 50.0%
ACTGTTCCTGGCTCAGGATT+TGG - chr5_2:20691591-20691610 Msa0762480:intron 50.0%
TTCTGTCCAAATCCTGAGCC+AGG + chr5_2:20691600-20691619 None:intergenic 50.0%
! GCTAGCTTATGGAACTCTCC+TGG + chr5_2:20691848-20691867 None:intergenic 50.0%
!! CTGAAGTGTCGGCTGTGCAT+AGG - chr5_2:20685646-20685665 Msa0762480:intron 55.0%
! TGGGGGAGCACATATTCGTG+TGG - chr5_2:20685677-20685696 Msa0762480:intron 55.0%
! TCTGAAGCTCGGTAGCTCGA+AGG + chr5_2:20686450-20686469 None:intergenic 55.0%
TCGAGCTACCGAGCTTCAGA+AGG - chr5_2:20686450-20686469 Msa0762480:intron 55.0%
AGCTACCGAGCTTCAGAAGG+AGG - chr5_2:20686453-20686472 Msa0762480:intron 55.0%
GCTACCGAGCTTCAGAAGGA+GGG - chr5_2:20686454-20686473 Msa0762480:intron 55.0%
GCACGGACACTTCTCGGATT+AGG - chr5_2:20686809-20686828 Msa0762480:intron 55.0%
GATTAGGTGTGTCCCCGTGT+CGG - chr5_2:20686825-20686844 Msa0762480:intron 55.0%
ATTAGGTGTGTCCCCGTGTC+GGG - chr5_2:20686826-20686845 Msa0762480:intron 55.0%
AGTTGTGCTGAACCTGGCGA+GGG + chr5_2:20687281-20687300 None:intergenic 55.0%
TAGTTGTGCTGAACCTGGCG+AGG + chr5_2:20687282-20687301 None:intergenic 55.0%
CACAAGGCAACAACCTGTCC+AGG + chr5_2:20687456-20687475 None:intergenic 55.0%
ACAGGTTGTTGCCTTGTGCC+AGG - chr5_2:20687458-20687477 Msa0762480:intron 55.0%
TAGGAATGGAGCCTGGCACA+AGG + chr5_2:20687472-20687491 None:intergenic 55.0%
TCCAGCAGTGAGGAAGGAAG+TGG - chr5_2:20688765-20688784 Msa0762480:intron 55.0%
!! CACTAAGGCACTGGCCAGTA+GGG + chr5_2:20689433-20689452 None:intergenic 55.0%
!! TCACTAAGGCACTGGCCAGT+AGG + chr5_2:20689434-20689453 None:intergenic 55.0%
GCTCAAGTCACGGCATGAAG+TGG - chr5_2:20690194-20690213 Msa0762480:intron 55.0%
! GCCCGTGTCGGTATTGTGTT+CGG + chr5_2:20690997-20691016 None:intergenic 55.0%
GCAGGCATTTCTTCCTCAGC+TGG + chr5_2:20692570-20692589 None:intergenic 55.0%
CACGTGTGTCAGTGTCCTGC+CGG - chr5_2:20685586-20685605 Msa0762480:intron 60.0%
CACGACAATTGCCCGACACG+GGG + chr5_2:20686840-20686859 None:intergenic 60.0%
GCACGACAATTGCCCGACAC+GGG + chr5_2:20686841-20686860 None:intergenic 60.0%
GGCACGACAATTGCCCGACA+CGG + chr5_2:20686842-20686861 None:intergenic 60.0%
AGGCACTCCAGCAGTGAGGA+AGG - chr5_2:20688759-20688778 Msa0762480:CDS 60.0%
GCCACTTCCTTCCTCACTGC+TGG + chr5_2:20688769-20688788 None:intergenic 60.0%
CACTGGCCAGTAGGGTTTCC+AGG + chr5_2:20689425-20689444 None:intergenic 60.0%
GTCGGCGTCGTGTCAGTGTC+AGG + chr5_2:20686863-20686882 None:intergenic 65.0%
ACCACTGACCTTCCCTCGCC+AGG - chr5_2:20687266-20687285 Msa0762480:intron 65.0%
ACCTGGCGAGGGAAGGTCAG+TGG + chr5_2:20687270-20687289 None:intergenic 65.0%
GTGCTGAACCTGGCGAGGGA+AGG + chr5_2:20687277-20687296 None:intergenic 65.0%
! CTCGAGGCACTCCAGCAGTG+AGG - chr5_2:20688755-20688774 Msa0762480:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 20684752 20693152 20684752 ID=Msa0762480;Name=Msa0762480
chr5_2 mRNA 20684752 20693152 20684752 ID=Msa0762480-mRNA-1;Parent=Msa0762480;Name=Msa0762480-mRNA-1;_AED=0.07;_eAED=0.07;_QI=479|1|1|1|0.92|0.85|14|484|481
chr5_2 exon 20684752 20685365 20684752 ID=Msa0762480-mRNA-1:exon:8778;Parent=Msa0762480-mRNA-1
chr5_2 exon 20686279 20686435 20686279 ID=Msa0762480-mRNA-1:exon:8777;Parent=Msa0762480-mRNA-1
chr5_2 exon 20686549 20686640 20686549 ID=Msa0762480-mRNA-1:exon:8776;Parent=Msa0762480-mRNA-1
chr5_2 exon 20687032 20687096 20687032 ID=Msa0762480-mRNA-1:exon:8775;Parent=Msa0762480-mRNA-1
chr5_2 exon 20687202 20687267 20687202 ID=Msa0762480-mRNA-1:exon:8774;Parent=Msa0762480-mRNA-1
chr5_2 exon 20688114 20688245 20688114 ID=Msa0762480-mRNA-1:exon:8773;Parent=Msa0762480-mRNA-1
chr5_2 exon 20688333 20688506 20688333 ID=Msa0762480-mRNA-1:exon:8772;Parent=Msa0762480-mRNA-1
chr5_2 exon 20688622 20688780 20688622 ID=Msa0762480-mRNA-1:exon:8771;Parent=Msa0762480-mRNA-1
chr5_2 exon 20688867 20688954 20688867 ID=Msa0762480-mRNA-1:exon:8770;Parent=Msa0762480-mRNA-1
chr5_2 exon 20689083 20689164 20689083 ID=Msa0762480-mRNA-1:exon:8769;Parent=Msa0762480-mRNA-1
chr5_2 exon 20690325 20690442 20690325 ID=Msa0762480-mRNA-1:exon:8768;Parent=Msa0762480-mRNA-1
chr5_2 exon 20690617 20690682 20690617 ID=Msa0762480-mRNA-1:exon:8767;Parent=Msa0762480-mRNA-1
chr5_2 exon 20691421 20691567 20691421 ID=Msa0762480-mRNA-1:exon:8766;Parent=Msa0762480-mRNA-1
chr5_2 exon 20692704 20693152 20692704 ID=Msa0762480-mRNA-1:exon:8765;Parent=Msa0762480-mRNA-1
chr5_2 five_prime_UTR 20692704 20693152 20692704 ID=Msa0762480-mRNA-1:five_prime_utr;Parent=Msa0762480-mRNA-1
chr5_2 five_prime_UTR 20691538 20691567 20691538 ID=Msa0762480-mRNA-1:five_prime_utr;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20691421 20691537 20691421 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20690617 20690682 20690617 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20690325 20690442 20690325 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20689083 20689164 20689083 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20688867 20688954 20688867 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20688622 20688780 20688622 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20688333 20688506 20688333 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20688114 20688245 20688114 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20687202 20687267 20687202 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20687032 20687096 20687032 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20686549 20686640 20686549 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20686279 20686435 20686279 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 CDS 20685236 20685365 20685236 ID=Msa0762480-mRNA-1:cds;Parent=Msa0762480-mRNA-1
chr5_2 three_prime_UTR 20684752 20685235 20684752 ID=Msa0762480-mRNA-1:three_prime_utr;Parent=Msa0762480-mRNA-1
Gene Sequence

>Msa0762480

ATGCCACCAAAGCCCTTAGACTATGAGTCGATTAATGAAAACGTGAAGAAGGCTCAGTATGCTGTCAGAGGTGAATTGTACCTTCGAGCTACCGAGCTTCAGAAGGAGGGCAAAAAGATTATATTCACTAATGTTGGAAACCCACATGCTTTGGGACAGAAACCACTGACCTTCCCTCGCCAGGTTGTTGCCTTGTGCCAGGCTCCATTCCTACTTGATGATCCTAACGTTGGACTGCTATTCCCCGCTGATGCAATTGCAAGAGCTAAGCAGTATCTCTCATTCACATCGGGTGGTTTAGGTGCTTATAGTGATTCTCGAGGCACTCCAGCAGTGAGGAAGGAAGTGGCAGAGTTTATACAGAGGCGTGATGGTTATCCAAGTGATCCAGAGTTCATCTATCTTACTGATGGTGCGAGCAAGGCTGTGATGCAGATATTAAATACTATAATCAGAGGCGAAGGAGATGGGATTATGGTTCCAGTCCCACAATACCCACTCTACTCTGCAACAATTGCTCTTCTTGGTGGTACTCTTGTTCCATACTACCTCGAAGAGACAGCAAATTGGGGTCTTGATACTAATGAACTTCGAAAATCAGTTAGAGAGGCTCGCTATAAAGGATTAAATGTTAAAGCAATGGTGATCATAAATCCTGGAAACCCTACTGGCCAGTGCCTTAGTGAAGAGAATTTAAGAGAGGTTTTGCAATTTTGTTATGAAGAAAATTTAGTCTTGCTTGGAGATGAGGTTTACCAGACAAATATATATCAGGATGAGCGACCCTTCATTAGTGCCAAAAAGGTTTTGATGGATATGGGGCCACCTTTAAGCAAGGAAGTCCAGCTTGTTTCTTTTCACTCAGTGTCGAAAGGGTATTTTGGTGAATGTGGACAACGTGGTGGATATTTTGAAATGACCAACATTCCTCCAGAGACTGTTGACGAGATCTATAAAGTTGCATCAATATCACTTAGTCCAAATGTTCCAGCACAAATATTTATGGGACTAATGATCAATCCACCCAAACCTGGAGATATTTCTTACGACAAATTTGTTAGGGAGAGCAAAGGAATACTTGAATCACTAAGAAGAAGAGCAAGGATCATGACTGATGGATTCAACAGCTGCAGGAATGTTGTTTGCAATTTCACAGAAGGTGCCATGTATTCATTCCCTCAAATAAAACTGCCACCAAAAGCTTTAGAGACTGCTAAACAGGCTGGAAAAGCTGCAGATGTTTACTACTGTCTCAAGCTTTTGGAAGCCACTGGCATATCCACTGTTCCTGGCTCAGGATTTGGACAGAAAGAAGGGGTTTTCCATTTGAGGACAACTATATTACCAGCTGAGGAAGAAATGCCTGCTATTATGGATAGTTTCAAAAAGTTCAATGATGATTTCATGGAACAATATGATGACCACAGAGGTTATTCAAGGTTGTAA
Protein sequence

>Msa0762480

MPPKPLDYESINENVKKAQYAVRGELYLRATELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKQYLSFTSGGLGAYSDSRGTPAVRKEVAEFIQRRDGYPSDPEFIYLTDGASKAVMQILNTIIRGEGDGIMVPVPQYPLYSATIALLGGTLVPYYLEETANWGLDTNELRKSVREARYKGLNVKAMVIINPGNPTGQCLSEENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISAKKVLMDMGPPLSKEVQLVSFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQIFMGLMINPPKPGDISYDKFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFPQIKLPPKALETAKQAGKAADVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPAIMDSFKKFNDDFMEQYDDHRGYSRL*