AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0805030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0805030 MtrunA17_Chr5g0412871 98.545 481 7 0 1 481 1 481 0.0 980
Msa0805030 MtrunA17_Chr8g0345201 49.585 482 232 3 3 474 44 524 3.34e-167 482
Msa0805030 MtrunA17_Chr6g0475681 24.868 378 250 14 93 463 173 523 2.41e-22 100
Msa0805030 MtrunA17_Chr2g0324801 23.200 375 245 11 74 440 17 356 3.35e-19 89.4
Msa0805030 MtrunA17_Chr8g0387481 26.012 346 225 14 100 438 87 408 4.49e-19 89.7
Msa0805030 MtrunA17_Chr7g0248681 26.562 256 173 9 100 352 86 329 4.81e-19 89.7
Msa0805030 MtrunA17_Chr6g0488041 25.784 287 191 11 94 376 84 352 9.67e-19 88.6
Msa0805030 MtrunA17_Chr8g0360241 23.077 377 247 14 72 440 47 388 8.84e-18 85.5
Msa0805030 MtrunA17_Chr3g0135251 23.077 377 254 16 100 466 78 428 1.02e-17 85.5
Msa0805030 MtrunA17_Chr8g0389311 25.974 308 207 13 103 407 83 372 3.11e-17 84.0
Msa0805030 MtrunA17_Chr8g0389321 25.974 308 207 13 103 407 83 372 3.11e-17 84.0
Msa0805030 MtrunA17_Chr5g0400831 27.723 202 132 7 100 291 79 276 3.04e-16 81.3
Msa0805030 MtrunA17_Chr8g0348351 25.424 177 127 4 100 273 86 260 6.71e-16 80.1
Msa0805030 MtrunA17_Chr4g0054371 27.119 177 123 5 100 272 79 253 1.36e-15 79.0
Msa0805030 MtrunA17_Chr5g0398431 25.874 143 103 3 129 270 178 318 1.20e-12 70.1
Msa0805030 MtrunA17_Chr3g0114811 22.493 369 240 15 99 463 115 441 2.76e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0805030 AT1G70580.4 84.823 481 73 0 1 481 1 481 0.0 866
Msa0805030 AT1G70580.2 84.823 481 73 0 1 481 1 481 0.0 866
Msa0805030 AT1G70580.3 84.823 481 73 0 1 481 1 481 0.0 866
Msa0805030 AT1G70580.1 84.823 481 73 0 1 481 1 481 0.0 866
Msa0805030 AT1G23310.1 84.200 481 76 0 1 481 1 481 0.0 860
Msa0805030 AT1G23310.2 84.738 439 67 0 1 439 1 439 0.0 788
Msa0805030 AT1G72330.1 49.372 478 231 3 5 472 62 538 1.86e-168 486
Msa0805030 AT1G72330.3 48.065 491 231 4 5 472 62 551 7.45e-165 477
Msa0805030 AT1G17290.1 49.375 480 232 3 5 474 65 543 3.00e-163 473
Msa0805030 AT1G72330.2 49.284 349 166 3 5 343 62 409 2.49e-115 346
Msa0805030 AT2G20610.1 24.930 357 226 14 97 447 98 418 4.39e-21 96.3
Msa0805030 AT5G51690.2 23.037 382 258 14 95 468 17 370 9.26e-21 94.4
Msa0805030 AT5G51690.1 23.037 382 258 14 95 468 140 493 1.22e-20 95.1
Msa0805030 AT2G24850.1 24.074 378 242 13 97 466 81 421 1.23e-20 94.7
Msa0805030 AT2G20610.2 24.633 341 218 13 97 431 98 405 1.10e-19 91.7
Msa0805030 AT5G36160.1 23.881 402 251 17 83 476 65 419 5.77e-19 89.4
Msa0805030 AT1G62960.1 24.084 382 254 17 99 471 202 556 2.40e-18 88.2
Msa0805030 AT4G11280.1 26.182 275 186 9 100 371 90 350 9.31e-18 86.3
Msa0805030 AT4G28420.2 23.134 402 266 15 69 465 64 427 1.18e-16 82.4
Msa0805030 AT4G26200.1 25.581 215 154 4 47 258 43 254 2.21e-16 81.6
Msa0805030 AT4G28410.1 23.097 381 238 12 74 440 77 416 9.59e-16 79.7
Msa0805030 AT4G23590.1 21.260 381 254 13 98 472 68 408 2.12e-15 78.6
Msa0805030 AT4G28420.1 25.000 240 163 6 69 308 64 286 4.00e-15 77.4
Msa0805030 AT4G08040.1 22.849 372 260 13 100 467 77 425 4.16e-15 77.8
Msa0805030 AT4G28410.2 22.667 375 235 12 74 434 77 410 7.82e-15 77.0
Msa0805030 AT5G53970.1 22.500 400 265 14 72 465 40 400 9.41e-15 76.6
Msa0805030 AT1G01480.1 21.994 341 238 13 100 434 87 405 3.91e-14 75.1
Msa0805030 AT4G23600.1 21.359 412 247 19 85 477 60 413 6.00e-14 73.9
Msa0805030 AT5G65800.1 28.409 176 121 4 100 272 79 252 3.30e-13 72.0
Msa0805030 AT4G37770.1 22.460 374 260 14 100 466 79 429 3.72e-13 72.0
Msa0805030 AT3G49700.1 27.778 198 133 6 100 291 79 272 4.78e-13 71.6
Msa0805030 AT1G01480.2 22.500 320 221 13 129 443 12 309 3.87e-12 68.2
Msa0805030 AT4G23600.3 24.138 261 161 12 85 342 60 286 6.31e-12 67.4
Msa0805030 AT3G61510.1 24.103 195 138 6 82 273 70 257 1.43e-11 67.0
Msa0805030 AT2G22810.1 26.286 175 123 5 100 270 79 251 9.00e-11 64.3

Find 155 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGCTTCAACCTTATTATT+TGG 0.103405 5_3:-21439761 Msa0805030:three_prime_UTR
TACAATGTCCTTACACAATA+TGG 0.130171 5_3:+21439653 None:intergenic
TGGCCTAGCTTTAGGCTTAA+AGG 0.222985 5_3:+21447818 None:intergenic
ACTGTTCCTGGTTCAGGATT+TGG 0.231566 5_3:-21441316 Msa0805030:CDS
ATTAATCGACTCATAGTCTA+AGG 0.247563 5_3:+21446361 None:intergenic
ATATCCACTGTTCCTGGTTC+AGG 0.262978 5_3:-21441322 Msa0805030:CDS
GGAAGAAATGCCTGCTATTA+TGG 0.271511 5_3:-21440210 Msa0805030:CDS
AATATTTGTGCTGGAACATT+TGG 0.293542 5_3:+21442226 None:intergenic
TTAGCAGTCTCTAAAGCTTT+TGG 0.293897 5_3:+21441403 None:intergenic
TTTCTTATGACCAATTTGTT+AGG 0.295713 5_3:-21442060 Msa0805030:CDS
AAGCTTCAACCTTATTATTT+GGG 0.297059 5_3:-21439760 Msa0805030:three_prime_UTR
TTACTACTGTCTCAAGCTTT+TGG 0.300237 5_3:-21441356 Msa0805030:CDS
TCATTCACATCGGGTGGTTT+AGG 0.306462 5_3:-21445352 Msa0805030:intron
AGCTGGACTTCATTGCTTAA+AGG 0.312879 5_3:+21443221 None:intergenic
TCTGCAACAATTGCTCTTCT+TGG 0.315497 5_3:-21443742 Msa0805030:CDS
TCGTCATCTCCCAAATAATA+AGG 0.321063 5_3:+21439751 None:intergenic
AAAGTTCAATGATGATTTCA+TGG 0.322465 5_3:-21440177 Msa0805030:CDS
TGTTGGAAACCCACATGCTT+TGG 0.325099 5_3:-21445673 Msa0805030:CDS
CACTGGCCAGTAGGGTTTCC+AGG 0.336167 5_3:+21443478 None:intergenic
CCTCGAAGAGACAGCAAATT+GGG 0.336543 5_3:-21443698 Msa0805030:CDS
ACCCTTCATTAGTGCCAAAA+AGG 0.337700 5_3:-21443350 Msa0805030:intron
GCCACTTCCTTCCTCACTGC+TGG 0.358669 5_3:+21444132 None:intergenic
GTTAGAGAGGCTCGCTATAA+AGG 0.359225 5_3:-21443646 Msa0805030:CDS
AAGATGATTGTTTGCCATCA+TGG 0.374038 5_3:+21439975 None:intergenic
GCTTCAGAAGGAGGGCAAAA+AGG 0.374053 5_3:-21446279 Msa0805030:intron
GCTGTCTCTTCGAGGTAGTA+TGG 0.374958 5_3:+21443706 None:intergenic
ACCTCGAAGAGACAGCAAAT+TGG 0.375963 5_3:-21443699 Msa0805030:CDS
TCAGTGTCGAAAGGGTATTT+TGG 0.386014 5_3:-21443185 Msa0805030:CDS
GAAGAAAATTTAGTCTTGCT+TGG 0.393995 5_3:-21443412 Msa0805030:CDS
GTTGGAAACCCACATGCTTT+GGG 0.394384 5_3:-21445672 Msa0805030:CDS
ATTACCTCTCCCTAACAAAT+TGG 0.395849 5_3:+21442050 None:intergenic
AGCTTTAGAGACTGCTAAAC+AGG 0.401858 5_3:-21441398 Msa0805030:CDS
ATAAGAAATATCTCCAGGTT+TGG 0.402372 5_3:+21442075 None:intergenic
CAGATTATATTCACTAATGT+TGG 0.402510 5_3:-21445690 Msa0805030:CDS
ACTGGTATATCCACTGTTCC+TGG 0.403447 5_3:-21441328 Msa0805030:CDS
TTCTTCTATCAATCAATCTA+AGG 0.403616 5_3:-21447564 Msa0805030:intron
CCCAATTTGCTGTCTCTTCG+AGG 0.403674 5_3:+21443698 None:intergenic
TTACCAGACAAATATATATC+AGG 0.407014 5_3:-21443380 Msa0805030:CDS
GTAATATAGTTGTCCTCAAA+TGG 0.407820 5_3:+21440240 None:intergenic
ACAGGTTGTTGCCTTGTGCC+AGG 0.408208 5_3:-21445452 Msa0805030:intron
GGCCTAGCTTTAGGCTTAAA+GGG 0.411414 5_3:+21447819 None:intergenic
ACAATGTCCTTACACAATAT+GGG 0.423223 5_3:+21439654 None:intergenic
GACTCATAGTCTAAGGGCTT+TGG 0.425588 5_3:+21446368 None:intergenic
TAAGAAATATCTCCAGGTTT+GGG 0.432585 5_3:+21442076 None:intergenic
TGTATAGGGTGTTCCATTTG+AGG 0.439749 5_3:-21440253 Msa0805030:intron
CATCCTGATATATATTTGTC+TGG 0.447557 5_3:+21443377 None:intergenic
AAAAGTATAATTTATTTATG+TGG 0.448994 5_3:+21447687 None:intergenic
TTCTTATGACCAATTTGTTA+GGG 0.451705 5_3:-21442059 Msa0805030:CDS
GCAACAATTGCTCTTCTTGG+TGG 0.456592 5_3:-21443739 Msa0805030:CDS
CAGAGTAGAGTGGGTATTGT+GGG 0.463276 5_3:+21443761 None:intergenic
GCTCTTGCAATTGCATCAGC+GGG 0.466274 5_3:+21445388 None:intergenic
TCACTAAGGCACTGGCCAGT+AGG 0.479549 5_3:+21443469 None:intergenic
GCAGGCATTTCTTCCTCAGC+TGG 0.482109 5_3:+21440218 None:intergenic
TCAGGATTTGGACAGAAAGA+AGG 0.482360 5_3:-21441304 Msa0805030:CDS
TAATCAGAGGCGAAGGAGAT+GGG 0.482526 5_3:-21443884 Msa0805030:CDS
CACTAAGGCACTGGCCAGTA+GGG 0.482562 5_3:+21443470 None:intergenic
TTGAAACTATCCATAATAGC+AGG 0.483460 5_3:+21440200 None:intergenic
TGACTCCACTTAGTGGGATA+AGG 0.485347 5_3:-21439837 Msa0805030:three_prime_UTR
CAGAAAACCCATATTGTGTA+AGG 0.487673 5_3:-21439661 Msa0805030:three_prime_UTR
ACCACTGACCTTCCCTCGCC+AGG 0.489247 5_3:-21445643 Msa0805030:intron
CTCTTAAATTCTCTTCACTA+AGG 0.490455 5_3:+21443455 None:intergenic
GGCACAACATATAATAATAC+AGG 0.493819 5_3:+21439996 None:intergenic
TGGTCATAAGAAATATCTCC+AGG 0.495347 5_3:+21442070 None:intergenic
TATTATATGTTGTGCCATGA+TGG 0.503878 5_3:-21439989 Msa0805030:three_prime_UTR
ATGTAGCTGACTCCACTTAG+TGG 0.505129 5_3:-21439844 Msa0805030:three_prime_UTR
TAGAGTGGGTATTGTGGGAC+TGG 0.505840 5_3:+21443766 None:intergenic
ATGACCAATTTGTTAGGGAG+AGG 0.505997 5_3:-21442054 Msa0805030:intron
ATAAATCCTGGAAACCCTAC+TGG 0.506931 5_3:-21443484 Msa0805030:CDS
GGGAATAGCAGTCCAACGTT+AGG 0.507835 5_3:+21445409 None:intergenic
TACACTTGTTGTTTATCACT+CGG 0.509208 5_3:-21447590 Msa0805030:five_prime_UTR
GTTGTTTGTAATTTCACAGA+AGG 0.509314 5_3:-21441573 Msa0805030:intron
TTTAGTCTTGCTTGGAGATG+AGG 0.510094 5_3:-21443404 Msa0805030:CDS
TTTGCCCTCCTTCTGAAGCT+CGG 0.511768 5_3:+21446283 None:intergenic
GACTGCTAAACAGGCTGGAA+AGG 0.514421 5_3:-21441389 Msa0805030:CDS
ATGACCACAGAGGTTATTCA+AGG 0.516115 5_3:-21440145 Msa0805030:CDS
CTGATGGATTCAACAGCTGC+AGG 0.516393 5_3:-21441599 Msa0805030:CDS
GGTTTCTGTCCCAAAGCATG+TGG 0.516790 5_3:+21445663 None:intergenic
ATAATTTATTTATGTGGCAG+TGG 0.518005 5_3:+21447693 None:intergenic
CAGTATCTCTCATTCACATC+GGG 0.519894 5_3:-21445361 Msa0805030:CDS
AATTCTCTTCACTAAGGCAC+TGG 0.520921 5_3:+21443461 None:intergenic
GCAATGGTGATCATAAATCC+TGG 0.522716 5_3:-21443496 Msa0805030:CDS
GTCAATAGATAACAAGGCAT+TGG 0.525143 5_3:+21447846 None:intergenic
TATTTGAGGGAATGAATACA+TGG 0.526126 5_3:+21441435 None:intergenic
ATGATCAATCCACCCAAACC+TGG 0.527405 5_3:-21442088 Msa0805030:CDS
TTCTGTCCAAATCCTGAACC+AGG 0.537163 5_3:+21441310 None:intergenic
GATTAATGAAAACGTGAAGA+AGG 0.538917 5_3:-21446345 Msa0805030:CDS
TAACTCACAAATATTTGTGC+TGG 0.540144 5_3:+21442217 None:intergenic
AGGCACTCCAGCAGTGAGGA+AGG 0.545081 5_3:-21444139 Msa0805030:CDS
ACTAAGTGGAGTCAGCTACA+TGG 0.545846 5_3:+21439846 None:intergenic
ACAAACCTCTGGAGGAATGT+TGG 0.548308 5_3:+21443127 None:intergenic
TCCAGCAGTGAGGAAGGAAG+TGG 0.549120 5_3:-21444133 Msa0805030:CDS
CTGAGTGAAAAGAAACAAGC+TGG 0.550221 5_3:+21443204 None:intergenic
CAAAGCCTTATCCCACTAAG+TGG 0.550276 5_3:+21439832 None:intergenic
TCATAGTCTAAGGGCTTTGG+TGG 0.550561 5_3:+21446371 None:intergenic
TCAGTAAGATAGATGAACTC+TGG 0.550763 5_3:+21443945 None:intergenic
ATAATCAGAGGCGAAGGAGA+TGG 0.551065 5_3:-21443885 Msa0805030:CDS
TCTTACTGATGGTGCGAGCA+AGG 0.553432 5_3:-21443931 Msa0805030:CDS
CAATTGTTGCAGAGTAGAGT+GGG 0.553825 5_3:+21443752 None:intergenic
TTAGAGACTGCTAAACAGGC+TGG 0.555028 5_3:-21441394 Msa0805030:CDS
AGAGCAAGGATCATGACTGA+TGG 0.558706 5_3:-21441615 Msa0805030:CDS
GTGCTGAACCTGGCGAGGGA+AGG 0.564545 5_3:+21445635 None:intergenic
GAAATATCTCCAGGTTTGGG+TGG 0.567289 5_3:+21442079 None:intergenic
AGCTCTTGCAATTGCATCAG+CGG 0.568224 5_3:+21445387 None:intergenic
TTAGGATCATCAAGTAGGAA+TGG 0.568415 5_3:+21445427 None:intergenic
GACTTGTAAAACACAGGAGG+AGG 0.569552 5_3:+21439790 None:intergenic
CAACGTTAGGATCATCAAGT+AGG 0.572461 5_3:+21445422 None:intergenic
GCAATTGTTGCAGAGTAGAG+TGG 0.575484 5_3:+21443751 None:intergenic
GAGTTTATACAGAGGCGTGA+TGG 0.576593 5_3:-21444108 Msa0805030:CDS
AGCTACCGAGCTTCAGAAGG+AGG 0.578963 5_3:-21446288 Msa0805030:CDS
CAGGATTTGGACAGAAAGAA+GGG 0.579885 5_3:-21441303 Msa0805030:intron
GAGTTCATCTATCTTACTGA+TGG 0.582441 5_3:-21443942 Msa0805030:CDS
CTACTTGATGATCCTAACGT+TGG 0.583949 5_3:-21445421 Msa0805030:CDS
TCTTAGGACTTGTAAAACAC+AGG 0.590391 5_3:+21439784 None:intergenic
TATCTCTCATTCACATCGGG+TGG 0.591208 5_3:-21445358 Msa0805030:CDS
TTAATCGACTCATAGTCTAA+GGG 0.594837 5_3:+21446362 None:intergenic
TCGAGCTACCGAGCTTCAGA+AGG 0.594916 5_3:-21446291 Msa0805030:CDS
GTTTCTGTCCCAAAGCATGT+GGG 0.598610 5_3:+21445664 None:intergenic
TGGACTTCATTGCTTAAAGG+TGG 0.598641 5_3:+21443224 None:intergenic
TTGTCAGTGATATATAGAGA+AGG 0.600842 5_3:+21440048 None:intergenic
GCAGAGTAGAGTGGGTATTG+TGG 0.601349 5_3:+21443760 None:intergenic
AATACTATAATCAGAGGCGA+AGG 0.605176 5_3:-21443891 Msa0805030:CDS
TAGTGAAGAGAATTTAAGAG+AGG 0.607939 5_3:-21443452 Msa0805030:CDS
CATCAAGTAGGAATGGAGCC+TGG 0.610744 5_3:+21445434 None:intergenic
ACCTGGCGAGGGAAGGTCAG+TGG 0.613068 5_3:+21445642 None:intergenic
GGTAGTGTCAATAGATAACA+AGG 0.616111 5_3:+21447840 None:intergenic
TAGGAATGGAGCCTGGCACA+AGG 0.616418 5_3:+21445441 None:intergenic
TGTAGCTGACTCCACTTAGT+GGG 0.616710 5_3:-21439843 Msa0805030:three_prime_UTR
AAACCATATTTGTAAAACAC+AGG 0.621428 5_3:+21439897 None:intergenic
TCTGAAGCTCGGTAGCTCGA+AGG 0.628218 5_3:+21446294 None:intergenic
AATCGCTAAGAAGAAGAGCA+AGG 0.628553 5_3:-21441629 Msa0805030:CDS
GACAACTATATTACCAGCTG+AGG 0.628816 5_3:-21440231 Msa0805030:CDS
GCTACCGAGCTTCAGAAGGA+GGG 0.629811 5_3:-21446287 Msa0805030:CDS
AATCAGAGGCGAAGGAGATG+GGG 0.631418 5_3:-21443883 Msa0805030:intron
AAATCCTGAACCAGGAACAG+TGG 0.633972 5_3:+21441318 None:intergenic
ACTTCGAAAATCAGTTAGAG+AGG 0.636186 5_3:-21443659 Msa0805030:CDS
AATGACCAACATTCCTCCAG+AGG 0.636754 5_3:-21443132 Msa0805030:intron
CTCGAAGAGACAGCAAATTG+GGG 0.639287 5_3:-21443697 Msa0805030:CDS
GCAGTATCTCTCATTCACAT+CGG 0.640124 5_3:-21445362 Msa0805030:CDS
ATATTAAATACTATAATCAG+AGG 0.642923 5_3:-21443897 Msa0805030:CDS
ATGAAGAGACAAACCTCTGG+AGG 0.648436 5_3:+21443119 None:intergenic
AGTTGTGCTGAACCTGGCGA+GGG 0.653433 5_3:+21445631 None:intergenic
AAGGCTCAGTATGCTGTCAG+AGG 0.653659 5_3:-21446326 Msa0805030:CDS
TACCCTTTAAGCCTAAAGCT+AGG 0.658156 5_3:-21447821 Msa0805030:five_prime_UTR
TAGGACTTGTAAAACACAGG+AGG 0.661000 5_3:+21439787 None:intergenic
AGAGGCGTGATGGTTATCCA+AGG 0.667903 5_3:-21444098 Msa0805030:intron
AAGTGGCAGAGTTTATACAG+AGG 0.671960 5_3:-21444116 Msa0805030:CDS
TAGTTGTGCTGAACCTGGCG+AGG 0.681080 5_3:+21445630 None:intergenic
CTCGAGGCACTCCAGCAGTG+AGG 0.699635 5_3:-21444143 Msa0805030:CDS
GGTGAATGTGGACAACGTGG+TGG 0.701411 5_3:-21443164 Msa0805030:CDS
AGGAACAGTGGATATACCAG+TGG 0.702390 5_3:+21441330 None:intergenic
GGTGCATATAGTGATTCTCG+AGG 0.716938 5_3:-21444159 Msa0805030:CDS
CTCTTGCAATTGCATCAGCG+GGG 0.718034 5_3:+21445389 None:intergenic
TTTGGTGAATGTGGACAACG+TGG 0.726588 5_3:-21443167 Msa0805030:CDS
ACAACCTTGAATAACCTCTG+TGG 0.736073 5_3:+21440141 None:intergenic
GAACAATATGATGACCACAG+AGG 0.786019 5_3:-21440155 Msa0805030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGTATAATTTATTTATG+TGG + chr5_3:21439961-21439980 None:intergenic 10.0%
!!! AAGTCAAATTATTTTTATAT+AGG + chr5_3:21446639-21446658 None:intergenic 10.0%
!!! TTTTGACTTTTGTTTTAATT+GGG - chr5_3:21440181-21440200 Msa0805030:CDS 15.0%
!!! AATAACTTGTTTTCAAATAT+TGG - chr5_3:21441932-21441951 Msa0805030:intron 15.0%
!! TCTAACAATTTAATTAAATG+TGG + chr5_3:21442104-21442123 None:intergenic 15.0%
!!! AAAAAAGTTTCTGAAAAATT+TGG - chr5_3:21442408-21442427 Msa0805030:intron 15.0%
!!! CAATCTATTTTTAAAATGTA+TGG + chr5_3:21442794-21442813 None:intergenic 15.0%
!!! AAGTCAAATTTTTATTAGAA+TGG - chr5_3:21443084-21443103 Msa0805030:intron 15.0%
!! ATATTAAATACTATAATCAG+AGG - chr5_3:21443748-21443767 Msa0805030:CDS 15.0%
!!! TTATAAATTAAATTTTGACC+AGG - chr5_3:21444121-21444140 Msa0805030:CDS 15.0%
!! CCAATTAAAAAAAAAAAATG+GGG + chr5_3:21445033-21445052 None:intergenic 15.0%
!! CCCAATTAAAAAAAAAAAAT+GGG + chr5_3:21445034-21445053 None:intergenic 15.0%
!!! CCCATTTTTTTTTTTTAATT+GGG - chr5_3:21445031-21445050 Msa0805030:intron 15.0%
!! TCCCAATTAAAAAAAAAAAA+TGG + chr5_3:21445035-21445054 None:intergenic 15.0%
!! TTTACGATTAAAAGAAAAAT+AGG + chr5_3:21446810-21446829 None:intergenic 15.0%
!!! ACATAAATTTATTTTTTGAC+AGG + chr5_3:21447721-21447740 None:intergenic 15.0%
!!! TTTGTTGTATGTTTTAGATA+TGG + chr5_3:21439698-21439717 None:intergenic 20.0%
!!! TTTAGCTATAAATTTCAAGT+GGG + chr5_3:21440152-21440171 None:intergenic 20.0%
!!! TTTTAGCTATAAATTTCAAG+TGG + chr5_3:21440153-21440172 None:intergenic 20.0%
!!! CTTTTGACTTTTGTTTTAAT+TGG - chr5_3:21440180-21440199 Msa0805030:CDS 20.0%
!!! ATTTCCTCTTTGAATTATTT+TGG - chr5_3:21441176-21441195 Msa0805030:intron 20.0%
!! TATAATACACATTCAATGAA+AGG + chr5_3:21441494-21441513 None:intergenic 20.0%
!!! TGTATTTCTAATCTTTATGT+TGG - chr5_3:21441678-21441697 Msa0805030:intron 20.0%
!! CAAGTTATTTGAATAGAAAA+TGG + chr5_3:21441921-21441940 None:intergenic 20.0%
!! TCATATTACGAAAATTACAA+GGG + chr5_3:21442066-21442085 None:intergenic 20.0%
!! ATCATATTACGAAAATTACA+AGG + chr5_3:21442067-21442086 None:intergenic 20.0%
!!! ATTTGTTGATTATTCTATTG+TGG - chr5_3:21442138-21442157 Msa0805030:intron 20.0%
!! CAATTCATTGTTATATAATG+TGG - chr5_3:21442332-21442351 Msa0805030:intron 20.0%
!! AAAAACAAAGGATAATTGAA+TGG + chr5_3:21442559-21442578 None:intergenic 20.0%
!! TACAATCAATTAAAATGCTT+AGG + chr5_3:21442586-21442605 None:intergenic 20.0%
!! TTCATGAAACAAGTTTATTT+GGG + chr5_3:21442615-21442634 None:intergenic 20.0%
!!! GTTTATTTTATCTGTGAAAA+TGG + chr5_3:21442742-21442761 None:intergenic 20.0%
!!! ATTTTTACTTTGTATGTGTT+TGG + chr5_3:21442941-21442960 None:intergenic 20.0%
!! ACATACTGTTAGAAATTAAA+CGG - chr5_3:21442964-21442983 Msa0805030:intron 20.0%
!!! TCAAATTTTTATTAGAATGG+TGG - chr5_3:21443087-21443106 Msa0805030:intron 20.0%
!! ATATAAAATTCAGATGGTAA+TGG + chr5_3:21443341-21443360 None:intergenic 20.0%
!! AGTAAGATATAAAATTCAGA+TGG + chr5_3:21443347-21443366 None:intergenic 20.0%
!! TTGCAAAAACATCTTATAAA+CGG - chr5_3:21443611-21443630 Msa0805030:intron 20.0%
!! TTAACTTAAATTTCAGTACA+AGG + chr5_3:21444754-21444773 None:intergenic 20.0%
!! TAATACAAGATGTAATCAAT+AGG - chr5_3:21444986-21445005 Msa0805030:intron 20.0%
!!! CCCCATTTTTTTTTTTTAAT+TGG - chr5_3:21445030-21445049 Msa0805030:intron 20.0%
!! TCAAAATCAAAATATTCGTT+CGG - chr5_3:21445644-21445663 Msa0805030:CDS 20.0%
!! GATATAATTGCTAATGTATA+AGG + chr5_3:21446688-21446707 None:intergenic 20.0%
!! ATTAGCAATTATATCATAAG+TGG - chr5_3:21446693-21446712 Msa0805030:intron 20.0%
!!! GATCTTTAAAAAATACTGTT+TGG - chr5_3:21446990-21447009 Msa0805030:intron 20.0%
!! ATCTTATCTTAAAAGAAGTT+GGG + chr5_3:21447016-21447035 None:intergenic 20.0%
!! TATCTTATCTTAAAAGAAGT+TGG + chr5_3:21447017-21447036 None:intergenic 20.0%
!! TTTACTTGTGAGATATATTA+AGG + chr5_3:21447068-21447087 None:intergenic 20.0%
!!! AACAGAAATTATTTTCCAAA+AGG + chr5_3:21447091-21447110 None:intergenic 20.0%
!!! AGTACAAATCTTTTAAAACA+GGG + chr5_3:21447147-21447166 None:intergenic 20.0%
!!! AGTTTTACAGCTAAAAATAT+AGG + chr5_3:21447187-21447206 None:intergenic 20.0%
!!! TATGTTTTAGATATGGTCTT+TGG + chr5_3:21439691-21439710 None:intergenic 25.0%
!! GGATTATTGAATTTTTGCAA+GGG + chr5_3:21439880-21439899 None:intergenic 25.0%
!! AGGATTATTGAATTTTTGCA+AGG + chr5_3:21439881-21439900 None:intergenic 25.0%
! ATAATTTATTTATGTGGCAG+TGG + chr5_3:21439955-21439974 None:intergenic 25.0%
! TTCTTCTATCAATCAATCTA+AGG - chr5_3:21440081-21440100 Msa0805030:three_prime_UTR 25.0%
! ACATCATACAAAACCAAAAA+CGG + chr5_3:21440235-21440254 None:intergenic 25.0%
!! ATGTGTTTTCTTCATGAATT+TGG - chr5_3:21440251-21440270 Msa0805030:intron 25.0%
!!! TAGTCCATAGTTTTAAATTG+CGG - chr5_3:21440926-21440945 Msa0805030:intron 25.0%
! ATTTAACATGTAGTAGTGTA+AGG - chr5_3:21441095-21441114 Msa0805030:intron 25.0%
!! GTATAGTCAAATTTCTTTTC+TGG - chr5_3:21441388-21441407 Msa0805030:CDS 25.0%
! CATGAGAATCTATGAATAAT+TGG + chr5_3:21441558-21441577 None:intergenic 25.0%
! CAGATTATATTCACTAATGT+TGG - chr5_3:21441955-21441974 Msa0805030:intron 25.0%
! AATCAGTAAAAGTAGAAGTA+TGG + chr5_3:21442041-21442060 None:intergenic 25.0%
! CATATTACGAAAATTACAAG+GGG + chr5_3:21442065-21442084 None:intergenic 25.0%
! AAATTATATAGGTCAGCTTT+AGG + chr5_3:21442166-21442185 None:intergenic 25.0%
! CTTCATGAAACAAGTTTATT+TGG + chr5_3:21442616-21442635 None:intergenic 25.0%
!! ATAAACTTGTTTCATGAAGA+TGG - chr5_3:21442617-21442636 Msa0805030:intron 25.0%
! CATACTGACAAAAGATATTT+GGG - chr5_3:21442646-21442665 Msa0805030:intron 25.0%
!! AAAACAAGTCCTTAAGATTT+TGG + chr5_3:21442700-21442719 None:intergenic 25.0%
! GTCTCTCTATTACAATAAAA+AGG - chr5_3:21442888-21442907 Msa0805030:intron 25.0%
! CTATCACATAGAAATATACA+TGG - chr5_3:21443263-21443282 Msa0805030:intron 25.0%
!!! GTTTATAAGATGTTTTTGCA+AGG + chr5_3:21443612-21443631 None:intergenic 25.0%
! AATAATGTCTCTTTCTTCAA+AGG + chr5_3:21444099-21444118 None:intergenic 25.0%
! TTACCAGACAAATATATATC+AGG - chr5_3:21444265-21444284 Msa0805030:intron 25.0%
!! TGAAGTAAAACATACCTTTT+TGG + chr5_3:21444312-21444331 None:intergenic 25.0%
!! CTAATTTTCTTTGCACAAAA+AGG - chr5_3:21444381-21444400 Msa0805030:intron 25.0%
!!! AAAAAGGTTTTGATGGATAT+GGG - chr5_3:21444397-21444416 Msa0805030:intron 25.0%
! TTAAATTTCAGTACAAGGTA+GGG + chr5_3:21444749-21444768 None:intergenic 25.0%
!!! ATGTTTAACAAGCTTTATTG+TGG - chr5_3:21444881-21444900 Msa0805030:intron 25.0%
! TGTAGAACATAGGTAAAAAT+GGG + chr5_3:21445527-21445546 None:intergenic 25.0%
!! TTTCTTATGACCAATTTGTT+AGG - chr5_3:21445585-21445604 Msa0805030:intron 25.0%
!!! TTCTTATGACCAATTTGTTA+GGG - chr5_3:21445586-21445605 Msa0805030:intron 25.0%
!!! CATTTAGCAAATTAGTCTTT+AGG + chr5_3:21445624-21445643 None:intergenic 25.0%
! TCTATAATAATATGCAGCAA+AGG - chr5_3:21445985-21446004 Msa0805030:intron 25.0%
!! CAGAAGGTATAAATAAATGA+CGG - chr5_3:21446088-21446107 Msa0805030:intron 25.0%
! AAAACTCAATGGATCAATAA+TGG + chr5_3:21446181-21446200 None:intergenic 25.0%
! CTAAAAATGGCATAGAAAAA+GGG + chr5_3:21446404-21446423 None:intergenic 25.0%
! ATTCTGATTTAGCCTAAAAA+TGG + chr5_3:21446417-21446436 None:intergenic 25.0%
!!! ATTATTTTTCCACCATTCTA+AGG - chr5_3:21446435-21446454 Msa0805030:intron 25.0%
!!! TTATTTTTCCACCATTCTAA+GGG - chr5_3:21446436-21446455 Msa0805030:intron 25.0%
!! GTGAAGTATTAGATCATATT+TGG + chr5_3:21446750-21446769 None:intergenic 25.0%
!! AGTCTTATAAAACAGAAACA+GGG + chr5_3:21446850-21446869 None:intergenic 25.0%
!! AAGTCTTATAAAACAGAAAC+AGG + chr5_3:21446851-21446870 None:intergenic 25.0%
! TCTTGTATGAATAATTTGGT+TGG + chr5_3:21446950-21446969 None:intergenic 25.0%
! CTTGTCTTGTATGAATAATT+TGG + chr5_3:21446954-21446973 None:intergenic 25.0%
!!! CAGTACAAATCTTTTAAAAC+AGG + chr5_3:21447148-21447167 None:intergenic 25.0%
! AAGAAAACCAATAGAATGTA+CGG + chr5_3:21447338-21447357 None:intergenic 25.0%
! TATGTGCTAAACTTTGTATA+GGG - chr5_3:21447378-21447397 Msa0805030:intron 25.0%
! AAAGTTCAATGATGATTTCA+TGG - chr5_3:21447468-21447487 Msa0805030:intron 25.0%
! AAAAAACTAAGGTTTAAGGA+GGG + chr5_3:21447575-21447594 None:intergenic 25.0%
! AAAAAAACTAAGGTTTAAGG+AGG + chr5_3:21447576-21447595 None:intergenic 25.0%
! GGAAAAAAAACTAAGGTTTA+AGG + chr5_3:21447579-21447598 None:intergenic 25.0%
! TAGAGAAGGAAAAAAAACTA+AGG + chr5_3:21447586-21447605 None:intergenic 25.0%
! AAACCATATTTGTAAAACAC+AGG + chr5_3:21447751-21447770 None:intergenic 25.0%
! AAAGCTTCAACCTTATTATT+TGG - chr5_3:21447884-21447903 Msa0805030:five_prime_UTR 25.0%
! AAGCTTCAACCTTATTATTT+GGG - chr5_3:21447885-21447904 Msa0805030:five_prime_UTR 25.0%
!!! TTGATTGTGTTTTGACACAT+TGG + chr5_3:21439765-21439784 None:intergenic 30.0%
!! AATGCTTGTGATTGATTTTG+TGG + chr5_3:21439850-21439869 None:intergenic 30.0%
! ATTGAATTTTTGCAAGGGAA+GGG + chr5_3:21439875-21439894 None:intergenic 30.0%
! TATTGAATTTTTGCAAGGGA+AGG + chr5_3:21439876-21439895 None:intergenic 30.0%
AATCATAGCCACTGAAAAAA+GGG + chr5_3:21439910-21439929 None:intergenic 30.0%
!! TACACTTGTTGTTTATCACT+CGG - chr5_3:21440055-21440074 Msa0805030:three_prime_UTR 30.0%
GGTCATTTCATCATGTTATA+TGG + chr5_3:21440131-21440150 None:intergenic 30.0%
!!! ATTGGGTTTGTGTTATTTTG+AGG - chr5_3:21440198-21440217 Msa0805030:CDS 30.0%
TCTATGTCATGATTTGATTG+TGG - chr5_3:21440276-21440295 Msa0805030:intron 30.0%
! ACTGTAGTAAGTTGAGAAAA+TGG - chr5_3:21440448-21440467 Msa0805030:intron 30.0%
! ACATGCTTTTGCATTTATAC+TGG - chr5_3:21440604-21440623 Msa0805030:intron 30.0%
TTTGTAATTGTACCATCATG+TGG - chr5_3:21440703-21440722 Msa0805030:intron 30.0%
! TAAAGTACTTAAAGAGTCCA+TGG - chr5_3:21440742-21440761 Msa0805030:intron 30.0%
TCATAGATCATAACATACCA+TGG + chr5_3:21440762-21440781 None:intergenic 30.0%
TTAATCCAACGGATAAGATT+TGG + chr5_3:21440811-21440830 None:intergenic 30.0%
CAACTGTTAGATTAATCCAA+CGG + chr5_3:21440822-21440841 None:intergenic 30.0%
!!! CTGCAATATAATGGTTTTAG+AGG - chr5_3:21440956-21440975 Msa0805030:intron 30.0%
ACTTTAAACTGTACATGTTG+CGG + chr5_3:21440985-21441004 None:intergenic 30.0%
AAAAATCAGTAAGATTGCAG+TGG - chr5_3:21441050-21441069 Msa0805030:intron 30.0%
CCAACCAAAATAATTCAAAG+AGG + chr5_3:21441183-21441202 None:intergenic 30.0%
!!! CCTCTTTGAATTATTTTGGT+TGG - chr5_3:21441180-21441199 Msa0805030:intron 30.0%
! TTAATCGACTCATAGTCTAA+GGG + chr5_3:21441286-21441305 None:intergenic 30.0%
! ATTAATCGACTCATAGTCTA+AGG + chr5_3:21441287-21441306 None:intergenic 30.0%
GATTAATGAAAACGTGAAGA+AGG - chr5_3:21441300-21441319 Msa0805030:intron 30.0%
! CATAGATTCTCATGCATTTT+TGG - chr5_3:21441564-21441583 Msa0805030:intron 30.0%
! GTCTATAAACTTGTTCAACA+AGG + chr5_3:21441608-21441627 None:intergenic 30.0%
CAAGTTTATAGACTTTAGCA+TGG - chr5_3:21441615-21441634 Msa0805030:CDS 30.0%
AATGGTAGTATGTTACACTT+CGG - chr5_3:21441649-21441668 Msa0805030:intron 30.0%
! CTTTTAAGCAATCCAATCTT+GGG + chr5_3:21441797-21441816 None:intergenic 30.0%
! CTGACCTATATAATTTTTCC+TGG - chr5_3:21442170-21442189 Msa0805030:intron 30.0%
CTGTCCAGGAAAAATTATAT+AGG + chr5_3:21442177-21442196 None:intergenic 30.0%
! CTATATAATTTTTCCTGGAC+AGG - chr5_3:21442175-21442194 Msa0805030:intron 30.0%
AAAAGTAACAGAACATTGAC+TGG + chr5_3:21442457-21442476 None:intergenic 30.0%
!! TAAAGGTACCTCAAAATGTA+TGG + chr5_3:21442520-21442539 None:intergenic 30.0%
TGCTTAGGAAAGAAAAACAA+AGG + chr5_3:21442571-21442590 None:intergenic 30.0%
! CCAAATATCTTTTGTCAGTA+TGG + chr5_3:21442648-21442667 None:intergenic 30.0%
CCATACTGACAAAAGATATT+TGG - chr5_3:21442645-21442664 Msa0805030:intron 30.0%
!! CCTTAAGATTTTGGTATAGT+TGG + chr5_3:21442691-21442710 None:intergenic 30.0%
CCAACTATACCAAAATCTTA+AGG - chr5_3:21442688-21442707 Msa0805030:intron 30.0%
AAACATCAGAGAAGACATTA+TGG - chr5_3:21442758-21442777 Msa0805030:intron 30.0%
TGTAATAGAGAGACAATGTA+AGG + chr5_3:21442882-21442901 None:intergenic 30.0%
! ATTTGACTTTGAACACAATG+TGG + chr5_3:21443073-21443092 None:intergenic 30.0%
! TTACTAATTGAACCAGCTTT+TGG + chr5_3:21443166-21443185 None:intergenic 30.0%
TTCTATGTGATAGATTGCAA+GGG + chr5_3:21443256-21443275 None:intergenic 30.0%
TTTCTATGTGATAGATTGCA+AGG + chr5_3:21443257-21443276 None:intergenic 30.0%
AGAATTGGAAAATTGCTACA+GGG + chr5_3:21443382-21443401 None:intergenic 30.0%
AAGAATTGGAAAATTGCTAC+AGG + chr5_3:21443383-21443402 None:intergenic 30.0%
TCTGTTATAACGAGAAGAAT+TGG + chr5_3:21443397-21443416 None:intergenic 30.0%
TGGAGCATAAATAAATACCT+TGG + chr5_3:21443567-21443586 None:intergenic 30.0%
! TGTTCAGTTTCCAATTTGTT+AGG - chr5_3:21443639-21443658 Msa0805030:CDS 30.0%
!! AGTTTCCAATTTGTTAGGAA+AGG - chr5_3:21443644-21443663 Msa0805030:CDS 30.0%
AATCACCTTTCCTAACAAAT+TGG + chr5_3:21443652-21443671 None:intergenic 30.0%
! AATCTGGCAATAAAAAGTGT+TGG + chr5_3:21443853-21443872 None:intergenic 30.0%
!! CACTTTTTATTGCCAGATTA+TGG - chr5_3:21443854-21443873 Msa0805030:intron 30.0%
CTCTTAAATTCTCTTCACTA+AGG + chr5_3:21444193-21444212 None:intergenic 30.0%
TAGTGAAGAGAATTTAAGAG+AGG - chr5_3:21444193-21444212 Msa0805030:intron 30.0%
!! GAAGAAAATTTAGTCTTGCT+TGG - chr5_3:21444233-21444252 Msa0805030:intron 30.0%
CATCCTGATATATATTTGTC+TGG + chr5_3:21444271-21444290 None:intergenic 30.0%
!! TTTGCACAAAAAGGTTTTGA+TGG - chr5_3:21444390-21444409 Msa0805030:intron 30.0%
!! CAAAAAGGTTTTGATGGATA+TGG - chr5_3:21444396-21444415 Msa0805030:intron 30.0%
!! AAAAGGTTTTGATGGATATG+GGG - chr5_3:21444398-21444417 Msa0805030:intron 30.0%
CTTAAATTTCAGTACAAGGT+AGG + chr5_3:21444750-21444769 None:intergenic 30.0%
ATGGAGTTCAAATTCCTTTA+GGG + chr5_3:21445109-21445128 None:intergenic 30.0%
AGTTAAACTTTGAACCTCAA+GGG + chr5_3:21445132-21445151 None:intergenic 30.0%
!! CGAACTGAATATTTTTGCTA+TGG - chr5_3:21445204-21445223 Msa0805030:intron 30.0%
AATATTTGTGCTGGAACATT+TGG + chr5_3:21445422-21445441 None:intergenic 30.0%
TAACTCACAAATATTTGTGC+TGG + chr5_3:21445431-21445450 None:intergenic 30.0%
ACATAGGTAAAAATGGGAAA+GGG + chr5_3:21445521-21445540 None:intergenic 30.0%
AACATAGGTAAAAATGGGAA+AGG + chr5_3:21445522-21445541 None:intergenic 30.0%
CTGTAGAACATAGGTAAAAA+TGG + chr5_3:21445528-21445547 None:intergenic 30.0%
! TTTTACCTATGTTCTACAGA+TGG - chr5_3:21445529-21445548 Msa0805030:intron 30.0%
TTTACCTATGTTCTACAGAT+GGG - chr5_3:21445530-21445549 Msa0805030:intron 30.0%
TAAGAAATATCTCCAGGTTT+GGG + chr5_3:21445572-21445591 None:intergenic 30.0%
ATAAGAAATATCTCCAGGTT+TGG + chr5_3:21445573-21445592 None:intergenic 30.0%
TGATCTAAGTCGTAAAAAGA+CGG - chr5_3:21445933-21445952 Msa0805030:intron 30.0%
GTTGTTTGTAATTTCACAGA+AGG - chr5_3:21446072-21446091 Msa0805030:intron 30.0%
TCATGTTACAGCAACATTAT+TGG - chr5_3:21446136-21446155 Msa0805030:intron 30.0%
TATTTGAGGGAATGAATACA+TGG + chr5_3:21446213-21446232 None:intergenic 30.0%
CCTAAAAATGGCATAGAAAA+AGG + chr5_3:21446405-21446424 None:intergenic 30.0%
!!! CCTTTTTCTATGCCATTTTT+AGG - chr5_3:21446402-21446421 Msa0805030:five_prime_UTR 30.0%
ACTTATTTGAGCTTATCTAC+TGG - chr5_3:21446472-21446491 Msa0805030:intron 30.0%
TAAAAATGTGTCAGACCAAA+TGG - chr5_3:21447040-21447059 Msa0805030:intron 30.0%
AGATATATTAAGGCTCCATT+TGG + chr5_3:21447058-21447077 None:intergenic 30.0%
! TATCTCACAAGTAAACCTTT+TGG - chr5_3:21447073-21447092 Msa0805030:intron 30.0%
CTATGTGCTAAACTTTGTAT+AGG - chr5_3:21447377-21447396 Msa0805030:intron 30.0%
GTAATATAGTTGTCCTCAAA+TGG + chr5_3:21447408-21447427 None:intergenic 30.0%
TTGAAACTATCCATAATAGC+AGG + chr5_3:21447448-21447467 None:intergenic 30.0%
TTGTCAGTGATATATAGAGA+AGG + chr5_3:21447600-21447619 None:intergenic 30.0%
GGCACAACATATAATAATAC+AGG + chr5_3:21447652-21447671 None:intergenic 30.0%
TATTATATGTTGTGCCATGA+TGG - chr5_3:21447656-21447675 Msa0805030:five_prime_UTR 30.0%
! TGTCCTGTGTTTTACAAATA+TGG - chr5_3:21447745-21447764 Msa0805030:five_prime_UTR 30.0%
! ATAAGGTTGAAGCTTTTCTT+AGG + chr5_3:21447880-21447899 None:intergenic 30.0%
ACAATGTCCTTACACAATAT+GGG + chr5_3:21447994-21448013 None:intergenic 30.0%
TACAATGTCCTTACACAATA+TGG + chr5_3:21447995-21448014 None:intergenic 30.0%
!!! GATGTGTCATTTTCTTTTGG+TGG + chr5_3:21439741-21439760 None:intergenic 35.0%
!!! GGAGATGTGTCATTTTCTTT+TGG + chr5_3:21439744-21439763 None:intergenic 35.0%
GTCAATAGATAACAAGGCAT+TGG + chr5_3:21439802-21439821 None:intergenic 35.0%
GGTAGTGTCAATAGATAACA+AGG + chr5_3:21439808-21439827 None:intergenic 35.0%
CACTGAAAAAAGGGTTCAAA+AGG + chr5_3:21439901-21439920 None:intergenic 35.0%
!!! CTTTTGAACCCTTTTTTCAG+TGG - chr5_3:21439899-21439918 Msa0805030:three_prime_UTR 35.0%
GAATCATAGCCACTGAAAAA+AGG + chr5_3:21439911-21439930 None:intergenic 35.0%
!!! GGATTCTTGTTTTCCGTTTT+TGG - chr5_3:21440219-21440238 Msa0805030:CDS 35.0%
! TGTTTGTTCACCTCCTTTTT+CGG - chr5_3:21440328-21440347 Msa0805030:intron 35.0%
AACTGCAAAGAAACCGAAAA+AGG + chr5_3:21440344-21440363 None:intergenic 35.0%
AACTGTTGAACAACGAACAA+AGG - chr5_3:21440519-21440538 Msa0805030:intron 35.0%
! AAAGGTTCAATCTGAAGTGT+CGG - chr5_3:21440537-21440556 Msa0805030:intron 35.0%
TAAGATTTGGAAAGAGAGGA+TGG + chr5_3:21440798-21440817 None:intergenic 35.0%
TCTTTCCAAATCTTATCCGT+TGG - chr5_3:21440803-21440822 Msa0805030:intron 35.0%
! TCTAACAGTTGAGATTTTGC+TGG - chr5_3:21440831-21440850 Msa0805030:intron 35.0%
! ATTTTGCTGGAGAGACATAA+GGG - chr5_3:21440844-21440863 Msa0805030:intron 35.0%
ACCATGTTGTGTATGATTGT+AGG - chr5_3:21440876-21440895 Msa0805030:intron 35.0%
TCCTACAATCATACACAACA+TGG + chr5_3:21440880-21440899 None:intergenic 35.0%
AAACCATTATATTGCAGCAG+CGG + chr5_3:21440953-21440972 None:intergenic 35.0%
CAGTGTTAGATCTTACTAGA+CGG - chr5_3:21441139-21441158 Msa0805030:intron 35.0%
CATACTACCATTACCATGAT+GGG + chr5_3:21441641-21441660 None:intergenic 35.0%
ACATACTACCATTACCATGA+TGG + chr5_3:21441642-21441661 None:intergenic 35.0%
ATGGTAGTATGTTACACTTC+GGG - chr5_3:21441650-21441669 Msa0805030:intron 35.0%
GAACTTGTATATCCCAAGAT+TGG - chr5_3:21441782-21441801 Msa0805030:intron 35.0%
! CCTTTTAAGCAATCCAATCT+TGG + chr5_3:21441798-21441817 None:intergenic 35.0%
CCAAGATTGGATTGCTTAAA+AGG - chr5_3:21441795-21441814 Msa0805030:intron 35.0%
TTAGGATCATCAAGTAGGAA+TGG + chr5_3:21442221-21442240 None:intergenic 35.0%
! GACTATGACCATACATTTTG+AGG - chr5_3:21442509-21442528 Msa0805030:intron 35.0%
! TGAGGTACCTTTAATATCTG+CGG - chr5_3:21442527-21442546 Msa0805030:intron 35.0%
GAAAACTCCGCAGATATTAA+AGG + chr5_3:21442537-21442556 None:intergenic 35.0%
! TGTTTGGCTAGTAGACATTT+TGG + chr5_3:21442925-21442944 None:intergenic 35.0%
AATCCATCAGCTAACAACTT+AGG + chr5_3:21442992-21443011 None:intergenic 35.0%
TGGAGCATGAGAAAATACAT+AGG - chr5_3:21443041-21443060 Msa0805030:intron 35.0%
! TTATTAGAATGGTGGCGAAA+AGG - chr5_3:21443095-21443114 Msa0805030:intron 35.0%
AATCCAACTATTCCAAAAGC+TGG - chr5_3:21443151-21443170 Msa0805030:CDS 35.0%
AGCAACGATTGCTATATTGT+AGG - chr5_3:21443465-21443484 Msa0805030:CDS 35.0%
GAGTAGAAAAATTGTGAGTG+TGG + chr5_3:21443587-21443606 None:intergenic 35.0%
TCAGTAAGATAGATGAACTC+TGG + chr5_3:21443703-21443722 None:intergenic 35.0%
GAGTTCATCTATCTTACTGA+TGG - chr5_3:21443703-21443722 Msa0805030:CDS 35.0%
AATACTATAATCAGAGGCGA+AGG - chr5_3:21443754-21443773 Msa0805030:CDS 35.0%
! ATGTGACTACAGAAAAGTAC+TGG + chr5_3:21443806-21443825 None:intergenic 35.0%
ACTTCGAAAATCAGTTAGAG+AGG - chr5_3:21443986-21444005 Msa0805030:intron 35.0%
! TTTTGACCAGGTTAAAGCAA+TGG - chr5_3:21444133-21444152 Msa0805030:CDS 35.0%
!! ACCTTTTTGGCACTAATGAA+GGG + chr5_3:21444299-21444318 None:intergenic 35.0%
!! TACCTTTTTGGCACTAATGA+AGG + chr5_3:21444300-21444319 None:intergenic 35.0%
!!! AAAGGGTATTTTGGTGAATG+TGG - chr5_3:21444469-21444488 Msa0805030:intron 35.0%
ATTATGAAGAGACAAACCTC+TGG + chr5_3:21444532-21444551 None:intergenic 35.0%
TAGAAAAATGAGAGCAAGCA+AGG - chr5_3:21444777-21444796 Msa0805030:intron 35.0%
GGATCAAACTCTAGACTATA+CGG - chr5_3:21444798-21444817 Msa0805030:intron 35.0%
AACAGCTTAAACTTGTGAGA+TGG + chr5_3:21444829-21444848 None:intergenic 35.0%
GATGGTTGTAAAACGATCAT+TGG + chr5_3:21445087-21445106 None:intergenic 35.0%
! AGTTCAAATTCCTTTAGGGA+TGG + chr5_3:21445105-21445124 None:intergenic 35.0%
GATGGAGTTCAAATTCCTTT+AGG + chr5_3:21445110-21445129 None:intergenic 35.0%
GAGTTAAACTTTGAACCTCA+AGG + chr5_3:21445133-21445152 None:intergenic 35.0%
AGACATCATGAAACAGTACA+TGG - chr5_3:21445167-21445186 Msa0805030:intron 35.0%
GTAGCTACAGCAAAAATTGA+AGG + chr5_3:21445317-21445336 None:intergenic 35.0%
ACTGTCTGCAAAAGAAAATG+AGG + chr5_3:21445362-21445381 None:intergenic 35.0%
TGGTCATAAGAAATATCTCC+AGG + chr5_3:21445578-21445597 None:intergenic 35.0%
ATTACCTCTCCCTAACAAAT+TGG + chr5_3:21445598-21445617 None:intergenic 35.0%
! GTTAACTTCCGTTTTCTGTA+GGG - chr5_3:21445666-21445685 Msa0805030:CDS 35.0%
GAATACAACCCTACAGAAAA+CGG + chr5_3:21445677-21445696 None:intergenic 35.0%
TAACACAATACTCACACATG+TGG + chr5_3:21445807-21445826 None:intergenic 35.0%
TGTCTGACATATGTCAGTAT+CGG + chr5_3:21445834-21445853 None:intergenic 35.0%
! ACATTTGGAAAGGTGTATGA+GGG + chr5_3:21445912-21445931 None:intergenic 35.0%
CTTAGATCAGACATTTGGAA+AGG + chr5_3:21445922-21445941 None:intergenic 35.0%
TACGACTTAGATCAGACATT+TGG + chr5_3:21445927-21445946 None:intergenic 35.0%
TGCTGTAACATGAGAATACA+TGG + chr5_3:21446129-21446148 None:intergenic 35.0%
! GCAACATTATTGGACTGTTT+TGG - chr5_3:21446146-21446165 Msa0805030:intron 35.0%
TGGATCAATAATGGTTTACC+AGG + chr5_3:21446172-21446191 None:intergenic 35.0%
!!! TGATCCATTGAGTTTTGTTC+AGG - chr5_3:21446185-21446204 Msa0805030:intron 35.0%
!!! TTGGTGGCAGTTTTATTTGA+GGG + chr5_3:21446226-21446245 None:intergenic 35.0%
!!! TTTGGTGGCAGTTTTATTTG+AGG + chr5_3:21446227-21446246 None:intergenic 35.0%
!!! TTAGCAGTCTCTAAAGCTTT+TGG + chr5_3:21446245-21446264 None:intergenic 35.0%
! TTACTACTGTCTCAAGCTTT+TGG - chr5_3:21446289-21446308 Msa0805030:CDS 35.0%
AATAAGCTGAAAGCAGCTTA+TGG + chr5_3:21446553-21446572 None:intergenic 35.0%
TACTTCACTAGTAAACCTCT+CGG - chr5_3:21446762-21446781 Msa0805030:intron 35.0%
! AGAAGAAAAAGTTTTCCGAG+AGG + chr5_3:21446780-21446799 None:intergenic 35.0%
AATAGAATGTACGGTCTGAT+TGG + chr5_3:21447329-21447348 None:intergenic 35.0%
AATCAGACCGTACATTCTAT+TGG - chr5_3:21447328-21447347 Msa0805030:intron 35.0%
! ATGGGATCGATTGAACTTTT+AGG + chr5_3:21447541-21447560 None:intergenic 35.0%
AAGATGATTGTTTGCCATCA+TGG + chr5_3:21447673-21447692 None:intergenic 35.0%
TCTTAGGACTTGTAAAACAC+AGG + chr5_3:21447864-21447883 None:intergenic 35.0%
TCGTCATCTCCCAAATAATA+AGG + chr5_3:21447897-21447916 None:intergenic 35.0%
CAGAAAACCCATATTGTGTA+AGG - chr5_3:21447984-21448003 Msa0805030:five_prime_UTR 35.0%
!! GTCATTTTCTTTTGGTGGAG+TGG + chr5_3:21439736-21439755 None:intergenic 40.0%
TACCCTTTAAGCCTAAAGCT+AGG - chr5_3:21439824-21439843 Msa0805030:three_prime_UTR 40.0%
!! TGATTTTGTGGCCTAGCTTT+AGG + chr5_3:21439838-21439857 None:intergenic 40.0%
TGCAAAGAAACCGAAAAAGG+AGG + chr5_3:21440341-21440360 None:intergenic 40.0%
ATAGACACAACATCGATACG+TGG - chr5_3:21440425-21440444 Msa0805030:intron 40.0%
GTTCAACAGTTATCAGACAC+CGG + chr5_3:21440510-21440529 None:intergenic 40.0%
!!! CTGTGCATAGGTTTTGAGTT+GGG - chr5_3:21440560-21440579 Msa0805030:intron 40.0%
!!! TGTGCATAGGTTTTGAGTTG+GGG - chr5_3:21440561-21440580 Msa0805030:intron 40.0%
CGGATAAGATTTGGAAAGAG+AGG + chr5_3:21440802-21440821 None:intergenic 40.0%
! GATTTTGCTGGAGAGACATA+AGG - chr5_3:21440843-21440862 Msa0805030:intron 40.0%
! CGGACCGCAATTTAAAACTA+TGG + chr5_3:21440933-21440952 None:intergenic 40.0%
!! TCTGCTTGACTTGCACTTAT+AGG - chr5_3:21441431-21441450 Msa0805030:CDS 40.0%
!! CTTGACTTGCACTTATAGGT+TGG - chr5_3:21441435-21441454 Msa0805030:CDS 40.0%
!! TGCACTTATAGGTTGGTTGA+AGG - chr5_3:21441442-21441461 Msa0805030:intron 40.0%
AAACTGATGTGCTTTGACGA+AGG + chr5_3:21441709-21441728 None:intergenic 40.0%
ACTCGTTAAATTCAAGCAGC+TGG + chr5_3:21441744-21441763 None:intergenic 40.0%
CAACGTTAGGATCATCAAGT+AGG + chr5_3:21442226-21442245 None:intergenic 40.0%
! CTACTTGATGATCCTAACGT+TGG - chr5_3:21442224-21442243 Msa0805030:intron 40.0%
GCAGTATCTCTCATTCACAT+CGG - chr5_3:21442283-21442302 Msa0805030:intron 40.0%
CAGTATCTCTCATTCACATC+GGG - chr5_3:21442284-21442303 Msa0805030:intron 40.0%
!! GCTAGTAGACATTTTGGTCA+TGG + chr5_3:21442919-21442938 None:intergenic 40.0%
GTTCCTAAGTTGTTAGCTGA+TGG - chr5_3:21442986-21443005 Msa0805030:intron 40.0%
TGGATTGTGAGTGGTTCATA+AGG - chr5_3:21443006-21443025 Msa0805030:intron 40.0%
GGATTGTGAGTGGTTCATAA+GGG - chr5_3:21443007-21443026 Msa0805030:intron 40.0%
!! AAAGGTTGACGTTTTGGTCA+TGG - chr5_3:21443113-21443132 Msa0805030:intron 40.0%
!!! GAACCAGCTTTTGGAATAGT+TGG + chr5_3:21443157-21443176 None:intergenic 40.0%
CAAGCTAGAACAATCTTGCT+AGG + chr5_3:21443305-21443324 None:intergenic 40.0%
AAGTGGCAGAGTTTATACAG+AGG - chr5_3:21443529-21443548 Msa0805030:intron 40.0%
CTCTGGATCACTACAAATAG+AGG + chr5_3:21443686-21443705 None:intergenic 40.0%
CAATTGTTGCAGAGTAGAGT+GGG + chr5_3:21443896-21443915 None:intergenic 40.0%
TCTGCAACAATTGCTCTTCT+TGG - chr5_3:21443903-21443922 Msa0805030:CDS 40.0%
TGATCACCATTGCTTTAACC+TGG + chr5_3:21444142-21444161 None:intergenic 40.0%
GCAATGGTGATCATAAATCC+TGG - chr5_3:21444149-21444168 Msa0805030:CDS 40.0%
ATAAATCCTGGAAACCCTAC+TGG - chr5_3:21444161-21444180 Msa0805030:CDS 40.0%
AATTCTCTTCACTAAGGCAC+TGG + chr5_3:21444187-21444206 None:intergenic 40.0%
!! TTTAGTCTTGCTTGGAGATG+AGG - chr5_3:21444241-21444260 Msa0805030:intron 40.0%
ACCCTTCATTAGTGCCAAAA+AGG - chr5_3:21444295-21444314 Msa0805030:intron 40.0%
TGGACTTCATTGCTTAAAGG+TGG + chr5_3:21444424-21444443 None:intergenic 40.0%
AGCTGGACTTCATTGCTTAA+AGG + chr5_3:21444427-21444446 None:intergenic 40.0%
CTGAGTGAAAAGAAACAAGC+TGG + chr5_3:21444444-21444463 None:intergenic 40.0%
!! TCTTTTCACTCAGTGTCGAA+AGG - chr5_3:21444451-21444470 Msa0805030:intron 40.0%
!! CTTTTCACTCAGTGTCGAAA+GGG - chr5_3:21444452-21444471 Msa0805030:intron 40.0%
!!! TCAGTGTCGAAAGGGTATTT+TGG - chr5_3:21444460-21444479 Msa0805030:intron 40.0%
TTTCTTGCTGAGTGTTAAGC+TGG - chr5_3:21444566-21444585 Msa0805030:intron 40.0%
TACACGTTTCAAGCTCTGTA+GGG + chr5_3:21444711-21444730 None:intergenic 40.0%
ATACACGTTTCAAGCTCTGT+AGG + chr5_3:21444712-21444731 None:intergenic 40.0%
AATTTCAGTACAAGGTAGGG+TGG + chr5_3:21444746-21444765 None:intergenic 40.0%
! CGTTTTACAACCATCCCTAA+AGG - chr5_3:21445092-21445111 Msa0805030:intron 40.0%
AATTTGAACTCCATCCCTTG+AGG - chr5_3:21445115-21445134 Msa0805030:intron 40.0%
AAACTTTGAACCTCAAGGGA+TGG + chr5_3:21445128-21445147 None:intergenic 40.0%
TGCCTGTTGTCTAGACATAT+AGG - chr5_3:21445249-21445268 Msa0805030:intron 40.0%
GTCCTATATGTCTAGACAAC+AGG + chr5_3:21445254-21445273 None:intergenic 40.0%
CACTTGCATGTTAAGTCAGA+TGG + chr5_3:21445276-21445295 None:intergenic 40.0%
TAGTCCCATCTGTAGAACAT+AGG + chr5_3:21445537-21445556 None:intergenic 40.0%
!! ATGACCAATTTGTTAGGGAG+AGG - chr5_3:21445591-21445610 Msa0805030:intron 40.0%
! GGTTAACTTCCGTTTTCTGT+AGG - chr5_3:21445665-21445684 Msa0805030:CDS 40.0%
GTCAGTGTCAGTATTGTGTT+CGG + chr5_3:21445735-21445754 None:intergenic 40.0%
! GACATTTGGAAAGGTGTATG+AGG + chr5_3:21445913-21445932 None:intergenic 40.0%
TCGTAAAAAGACGGCTCTTT+AGG - chr5_3:21445942-21445961 Msa0805030:intron 40.0%
AATCGCTAAGAAGAAGAGCA+AGG - chr5_3:21446016-21446035 Msa0805030:intron 40.0%
!!! ATTATTGGACTGTTTTGGCC+TGG - chr5_3:21446151-21446170 Msa0805030:intron 40.0%
!! AGCTTTAGAGACTGCTAAAC+AGG - chr5_3:21446247-21446266 Msa0805030:intron 40.0%
TCAGGATTTGGACAGAAAGA+AGG - chr5_3:21446341-21446360 Msa0805030:CDS 40.0%
CAGGATTTGGACAGAAAGAA+GGG - chr5_3:21446342-21446361 Msa0805030:CDS 40.0%
ATCCAAACAGACCCTTAGAA+TGG + chr5_3:21446450-21446469 None:intergenic 40.0%
CTTATTTCCATAAGCTGTCC+AGG - chr5_3:21446567-21446586 Msa0805030:intron 40.0%
TAGAGCTTATGGAACTATCC+TGG + chr5_3:21446588-21446607 None:intergenic 40.0%
GATAGTTCCATAAGCTCTAC+AGG - chr5_3:21446589-21446608 Msa0805030:intron 40.0%
ATGCTATCCTGTAGAGCTTA+TGG + chr5_3:21446599-21446618 None:intergenic 40.0%
! TGTATAGGGTGTTCCATTTG+AGG - chr5_3:21447392-21447411 Msa0805030:intron 40.0%
GACAACTATATTACCAGCTG+AGG - chr5_3:21447414-21447433 Msa0805030:intron 40.0%
GGAAGAAATGCCTGCTATTA+TGG - chr5_3:21447435-21447454 Msa0805030:intron 40.0%
GAACAATATGATGACCACAG+AGG - chr5_3:21447490-21447509 Msa0805030:intron 40.0%
ATGACCACAGAGGTTATTCA+AGG - chr5_3:21447500-21447519 Msa0805030:intron 40.0%
ACAACCTTGAATAACCTCTG+TGG + chr5_3:21447507-21447526 None:intergenic 40.0%
!! AGGAGGGTATGTTTTTCGAT+GGG + chr5_3:21447559-21447578 None:intergenic 40.0%
!! AAGGAGGGTATGTTTTTCGA+TGG + chr5_3:21447560-21447579 None:intergenic 40.0%
TAGGACTTGTAAAACACAGG+AGG + chr5_3:21447861-21447880 None:intergenic 40.0%
!! GGCCTAGCTTTAGGCTTAAA+GGG + chr5_3:21439829-21439848 None:intergenic 45.0%
!! TGGCCTAGCTTTAGGCTTAA+AGG + chr5_3:21439830-21439849 None:intergenic 45.0%
!!! GCTGTGCATAGGTTTTGAGT+TGG - chr5_3:21440559-21440578 Msa0805030:intron 45.0%
!!! GTGCATAGGTTTTGAGTTGG+GGG - chr5_3:21440562-21440581 Msa0805030:intron 45.0%
ACACAGCATATGCCACATGA+TGG + chr5_3:21440718-21440737 None:intergenic 45.0%
! TCATAGTCTAAGGGCTTTGG+TGG + chr5_3:21441277-21441296 None:intergenic 45.0%
GACTCATAGTCTAAGGGCTT+TGG + chr5_3:21441280-21441299 None:intergenic 45.0%
GTTCAACAAGGTCACACTTG+TGG + chr5_3:21441596-21441615 None:intergenic 45.0%
TGTTGGAAACCCACATGCTT+TGG - chr5_3:21441972-21441991 Msa0805030:intron 45.0%
GTTGGAAACCCACATGCTTT+GGG - chr5_3:21441973-21441992 Msa0805030:intron 45.0%
GTTTCTGTCCCAAAGCATGT+GGG + chr5_3:21441984-21442003 None:intergenic 45.0%
TATGGTAGTTGTGCTGAACC+TGG + chr5_3:21442023-21442042 None:intergenic 45.0%
AGCTCTTGCAATTGCATCAG+CGG + chr5_3:21442261-21442280 None:intergenic 45.0%
TATCTCTCATTCACATCGGG+TGG - chr5_3:21442287-21442306 Msa0805030:intron 45.0%
TCATTCACATCGGGTGGTTT+AGG - chr5_3:21442293-21442312 Msa0805030:intron 45.0%
!! GTTAGCTGATGGATTGTGAG+TGG - chr5_3:21442997-21443016 Msa0805030:intron 45.0%
TCTCATGCTCCAAAGCCTTA+GGG + chr5_3:21443033-21443052 None:intergenic 45.0%
TTCTCATGCTCCAAAGCCTT+AGG + chr5_3:21443034-21443053 None:intergenic 45.0%
! TGGCGAAAAGGTTGACGTTT+TGG - chr5_3:21443107-21443126 Msa0805030:intron 45.0%
!! GTTGACGTTTTGGTCATGGA+GGG - chr5_3:21443117-21443136 Msa0805030:intron 45.0%
GGTGCATATAGTGATTCTCG+AGG - chr5_3:21443486-21443505 Msa0805030:CDS 45.0%
! GAGTTTATACAGAGGCGTGA+TGG - chr5_3:21443537-21443556 Msa0805030:intron 45.0%
ATAATCAGAGGCGAAGGAGA+TGG - chr5_3:21443760-21443779 Msa0805030:CDS 45.0%
TAATCAGAGGCGAAGGAGAT+GGG - chr5_3:21443761-21443780 Msa0805030:CDS 45.0%
! CAGAGTAGAGTGGGTATTGT+GGG + chr5_3:21443887-21443906 None:intergenic 45.0%
GCAATTGTTGCAGAGTAGAG+TGG + chr5_3:21443897-21443916 None:intergenic 45.0%
GCAACAATTGCTCTTCTTGG+TGG - chr5_3:21443906-21443925 Msa0805030:CDS 45.0%
ACCTCGAAGAGACAGCAAAT+TGG - chr5_3:21443946-21443965 Msa0805030:CDS 45.0%
CCTCGAAGAGACAGCAAATT+GGG - chr5_3:21443947-21443966 Msa0805030:CDS 45.0%
CTCGAAGAGACAGCAAATTG+GGG - chr5_3:21443948-21443967 Msa0805030:CDS 45.0%
GTTAGAGAGGCTCGCTATAA+AGG - chr5_3:21443999-21444018 Msa0805030:intron 45.0%
TTTGGTGAATGTGGACAACG+TGG - chr5_3:21444478-21444497 Msa0805030:intron 45.0%
AATGACCAACATTCCTCCAG+AGG - chr5_3:21444513-21444532 Msa0805030:intron 45.0%
! ACAAACCTCTGGAGGAATGT+TGG + chr5_3:21444521-21444540 None:intergenic 45.0%
ATGAAGAGACAAACCTCTGG+AGG + chr5_3:21444529-21444548 None:intergenic 45.0%
CCATTGAGAAGCTCAAGTCA+CGG - chr5_3:21444927-21444946 Msa0805030:intron 45.0%
TTCATGATGTCTCAGCTCAG+TGG + chr5_3:21445159-21445178 None:intergenic 45.0%
AATGGGAAAGGGTGAGGAAA+AGG + chr5_3:21445510-21445529 None:intergenic 45.0%
GGTAAAAATGGGAAAGGGTG+AGG + chr5_3:21445516-21445535 None:intergenic 45.0%
ATGATCAATCCACCCAAACC+TGG - chr5_3:21445557-21445576 Msa0805030:intron 45.0%
GAAATATCTCCAGGTTTGGG+TGG + chr5_3:21445569-21445588 None:intergenic 45.0%
CTTCAAACCAAATGTGCGTC+TGG + chr5_3:21445857-21445876 None:intergenic 45.0%
AGAGCAAGGATCATGACTGA+TGG - chr5_3:21446030-21446049 Msa0805030:intron 45.0%
GGCACCTGAACAAAACTCAA+TGG + chr5_3:21446192-21446211 None:intergenic 45.0%
!!! GCAGTCTCTAAAGCTTTTGG+TGG + chr5_3:21446242-21446261 None:intergenic 45.0%
TTAGAGACTGCTAAACAGGC+TGG - chr5_3:21446251-21446270 Msa0805030:intron 45.0%
AGGAACAGTGGATATACCAG+TGG + chr5_3:21446318-21446337 None:intergenic 45.0%
ACTGGTATATCCACTGTTCC+TGG - chr5_3:21446317-21446336 Msa0805030:CDS 45.0%
ATATCCACTGTTCCTGGTTC+AGG - chr5_3:21446323-21446342 Msa0805030:CDS 45.0%
AAATCCTGAACCAGGAACAG+TGG + chr5_3:21446330-21446349 None:intergenic 45.0%
ACTGTTCCTGGTTCAGGATT+TGG - chr5_3:21446329-21446348 Msa0805030:CDS 45.0%
TTCTGTCCAAATCCTGAACC+AGG + chr5_3:21446338-21446357 None:intergenic 45.0%
CAAACAGACCCTTAGAATGG+TGG + chr5_3:21446447-21446466 None:intergenic 45.0%
! CACCATTCTAAGGGTCTGTT+TGG - chr5_3:21446445-21446464 Msa0805030:intron 45.0%
GAACTATCCTGGACAGCTTA+TGG + chr5_3:21446577-21446596 None:intergenic 45.0%
ACTAAGTGGAGTCAGCTACA+TGG + chr5_3:21447802-21447821 None:intergenic 45.0%
! ATGTAGCTGACTCCACTTAG+TGG - chr5_3:21447801-21447820 Msa0805030:five_prime_UTR 45.0%
! TGTAGCTGACTCCACTTAGT+GGG - chr5_3:21447802-21447821 Msa0805030:five_prime_UTR 45.0%
TGACTCCACTTAGTGGGATA+AGG - chr5_3:21447808-21447827 Msa0805030:five_prime_UTR 45.0%
! CAAAGCCTTATCCCACTAAG+TGG + chr5_3:21447816-21447835 None:intergenic 45.0%
GACTTGTAAAACACAGGAGG+AGG + chr5_3:21447858-21447877 None:intergenic 45.0%
!!! AAATATTTTAAATTAACTTA+GGG + chr5_3:21441079-21441098 None:intergenic 5.0%
!!! TAAATATTTTAAATTAACTT+AGG + chr5_3:21441080-21441099 None:intergenic 5.0%
!!! TTTTAAATAGAATATTTTTT+AGG - chr5_3:21447927-21447946 Msa0805030:five_prime_UTR 5.0%
AACAGTTATCAGACACCGGC+AGG + chr5_3:21440506-21440525 None:intergenic 50.0%
GGTCCGCTGCTGCAATATAA+TGG - chr5_3:21440947-21440966 Msa0805030:intron 50.0%
AAGGCTCAGTATGCTGTCAG+AGG - chr5_3:21441319-21441338 Msa0805030:CDS 50.0%
!! TTTGCCCTCCTTCTGAAGCT+CGG + chr5_3:21441365-21441384 None:intergenic 50.0%
GCTTCAGAAGGAGGGCAAAA+AGG - chr5_3:21441366-21441385 Msa0805030:CDS 50.0%
GACTTTAGCATGGCCCATCA+TGG - chr5_3:21441625-21441644 Msa0805030:CDS 50.0%
AGCATGGCCCATCATGGTAA+TGG - chr5_3:21441631-21441650 Msa0805030:CDS 50.0%
GGTTTCTGTCCCAAAGCATG+TGG + chr5_3:21441985-21442004 None:intergenic 50.0%
CATCAAGTAGGAATGGAGCC+TGG + chr5_3:21442214-21442233 None:intergenic 50.0%
GGGAATAGCAGTCCAACGTT+AGG + chr5_3:21442239-21442258 None:intergenic 50.0%
CTCTTGCAATTGCATCAGCG+GGG + chr5_3:21442259-21442278 None:intergenic 50.0%
GCTCTTGCAATTGCATCAGC+GGG + chr5_3:21442260-21442279 None:intergenic 50.0%
AGTGGTTCATAAGGGCCCTA+AGG - chr5_3:21443015-21443034 Msa0805030:intron 50.0%
TCATAAGGGCCCTAAGGCTT+TGG - chr5_3:21443021-21443040 Msa0805030:intron 50.0%
!! GGTTGACGTTTTGGTCATGG+AGG - chr5_3:21443116-21443135 Msa0805030:intron 50.0%
! AGAGGCGTGATGGTTATCCA+AGG - chr5_3:21443547-21443566 Msa0805030:intron 50.0%
! TCTTACTGATGGTGCGAGCA+AGG - chr5_3:21443714-21443733 Msa0805030:CDS 50.0%
AATCAGAGGCGAAGGAGATG+GGG - chr5_3:21443762-21443781 Msa0805030:CDS 50.0%
GTGGGACTGGAACCATAATC+TGG + chr5_3:21443869-21443888 None:intergenic 50.0%
! TAGAGTGGGTATTGTGGGAC+TGG + chr5_3:21443882-21443901 None:intergenic 50.0%
! GCAGAGTAGAGTGGGTATTG+TGG + chr5_3:21443888-21443907 None:intergenic 50.0%
GCTGTCTCTTCGAGGTAGTA+TGG + chr5_3:21443942-21443961 None:intergenic 50.0%
!! CCCAATTTGCTGTCTCTTCG+AGG + chr5_3:21443950-21443969 None:intergenic 50.0%
CCGTGACTTGAGCTTCTCAA+TGG + chr5_3:21444930-21444949 None:intergenic 50.0%
AGGGTGAGGAAAAGGAGAGA+GGG + chr5_3:21445502-21445521 None:intergenic 50.0%
AAGGGTGAGGAAAAGGAGAG+AGG + chr5_3:21445503-21445522 None:intergenic 50.0%
TCAGACACCAGACGCACATT+TGG - chr5_3:21445847-21445866 Msa0805030:intron 50.0%
!! CTGATGGATTCAACAGCTGC+AGG - chr5_3:21446046-21446065 Msa0805030:intron 50.0%
GACTGCTAAACAGGCTGGAA+AGG - chr5_3:21446256-21446275 Msa0805030:intron 50.0%
!! CTCAAGCTTTTGGAAGCCAC+TGG - chr5_3:21446299-21446318 Msa0805030:CDS 50.0%
!! CTGAAGTGTCGGCTGTGCAT+AGG - chr5_3:21440548-21440567 Msa0805030:intron 55.0%
! TGGGGGAGCACATATTCGTG+TGG - chr5_3:21440579-21440598 Msa0805030:intron 55.0%
! TCTGAAGCTCGGTAGCTCGA+AGG + chr5_3:21441354-21441373 None:intergenic 55.0%
TCGAGCTACCGAGCTTCAGA+AGG - chr5_3:21441354-21441373 Msa0805030:CDS 55.0%
AGCTACCGAGCTTCAGAAGG+AGG - chr5_3:21441357-21441376 Msa0805030:CDS 55.0%
GCTACCGAGCTTCAGAAGGA+GGG - chr5_3:21441358-21441377 Msa0805030:CDS 55.0%
AGTTGTGCTGAACCTGGCGA+GGG + chr5_3:21442017-21442036 None:intergenic 55.0%
TAGTTGTGCTGAACCTGGCG+AGG + chr5_3:21442018-21442037 None:intergenic 55.0%
CACAAGGCAACAACCTGTCC+AGG + chr5_3:21442191-21442210 None:intergenic 55.0%
ACAGGTTGTTGCCTTGTGCC+AGG - chr5_3:21442193-21442212 Msa0805030:intron 55.0%
TAGGAATGGAGCCTGGCACA+AGG + chr5_3:21442207-21442226 None:intergenic 55.0%
TCCAGCAGTGAGGAAGGAAG+TGG - chr5_3:21443512-21443531 Msa0805030:intron 55.0%
!! CACTAAGGCACTGGCCAGTA+GGG + chr5_3:21444178-21444197 None:intergenic 55.0%
!! TCACTAAGGCACTGGCCAGT+AGG + chr5_3:21444179-21444198 None:intergenic 55.0%
GGTGAATGTGGACAACGTGG+TGG - chr5_3:21444481-21444500 Msa0805030:intron 55.0%
GCTCAAGTCACGGCATGAAG+TGG - chr5_3:21444937-21444956 Msa0805030:intron 55.0%
GCAGGCATTTCTTCCTCAGC+TGG + chr5_3:21447430-21447449 None:intergenic 55.0%
CACGTGTGTCAGTGTCCTGC+CGG - chr5_3:21440488-21440507 Msa0805030:intron 60.0%
AGGCACTCCAGCAGTGAGGA+AGG - chr5_3:21443506-21443525 Msa0805030:intron 60.0%
GCCACTTCCTTCCTCACTGC+TGG + chr5_3:21443516-21443535 None:intergenic 60.0%
CACTGGCCAGTAGGGTTTCC+AGG + chr5_3:21444170-21444189 None:intergenic 60.0%
ACCACTGACCTTCCCTCGCC+AGG - chr5_3:21442002-21442021 Msa0805030:intron 65.0%
ACCTGGCGAGGGAAGGTCAG+TGG + chr5_3:21442006-21442025 None:intergenic 65.0%
GTGCTGAACCTGGCGAGGGA+AGG + chr5_3:21442013-21442032 None:intergenic 65.0%
! CTCGAGGCACTCCAGCAGTG+AGG - chr5_3:21443502-21443521 Msa0805030:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 21439653 21448014 21439653 ID=Msa0805030;Name=Msa0805030
chr5_3 mRNA 21439653 21448014 21439653 ID=Msa0805030-mRNA-1;Parent=Msa0805030;Name=Msa0805030-mRNA-1;_AED=0.06;_eAED=0.06;_QI=480|1|1|1|0.92|0.85|14|486|481
chr5_3 exon 21439653 21440268 21439653 ID=Msa0805030-mRNA-1:exon:8596;Parent=Msa0805030-mRNA-1
chr5_3 exon 21441304 21441460 21441304 ID=Msa0805030-mRNA-1:exon:8595;Parent=Msa0805030-mRNA-1
chr5_3 exon 21441574 21441665 21441574 ID=Msa0805030-mRNA-1:exon:8594;Parent=Msa0805030-mRNA-1
chr5_3 exon 21442055 21442119 21442055 ID=Msa0805030-mRNA-1:exon:8593;Parent=Msa0805030-mRNA-1
chr5_3 exon 21442225 21442290 21442225 ID=Msa0805030-mRNA-1:exon:8592;Parent=Msa0805030-mRNA-1
chr5_3 exon 21443133 21443264 21443133 ID=Msa0805030-mRNA-1:exon:8591;Parent=Msa0805030-mRNA-1
chr5_3 exon 21443351 21443524 21443351 ID=Msa0805030-mRNA-1:exon:8590;Parent=Msa0805030-mRNA-1
chr5_3 exon 21443639 21443797 21443639 ID=Msa0805030-mRNA-1:exon:8589;Parent=Msa0805030-mRNA-1
chr5_3 exon 21443884 21443971 21443884 ID=Msa0805030-mRNA-1:exon:8588;Parent=Msa0805030-mRNA-1
chr5_3 exon 21444099 21444180 21444099 ID=Msa0805030-mRNA-1:exon:8587;Parent=Msa0805030-mRNA-1
chr5_3 exon 21445353 21445470 21445353 ID=Msa0805030-mRNA-1:exon:8586;Parent=Msa0805030-mRNA-1
chr5_3 exon 21445644 21445709 21445644 ID=Msa0805030-mRNA-1:exon:8585;Parent=Msa0805030-mRNA-1
chr5_3 exon 21446280 21446426 21446280 ID=Msa0805030-mRNA-1:exon:8584;Parent=Msa0805030-mRNA-1
chr5_3 exon 21447565 21448014 21447565 ID=Msa0805030-mRNA-1:exon:8583;Parent=Msa0805030-mRNA-1
chr5_3 five_prime_UTR 21447565 21448014 21447565 ID=Msa0805030-mRNA-1:five_prime_utr;Parent=Msa0805030-mRNA-1
chr5_3 five_prime_UTR 21446397 21446426 21446397 ID=Msa0805030-mRNA-1:five_prime_utr;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21446280 21446396 21446280 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21445644 21445709 21445644 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21445353 21445470 21445353 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21444099 21444180 21444099 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21443884 21443971 21443884 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21443639 21443797 21443639 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21443351 21443524 21443351 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21443133 21443264 21443133 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21442225 21442290 21442225 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21442055 21442119 21442055 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21441574 21441665 21441574 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21441304 21441460 21441304 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 CDS 21440139 21440268 21440139 ID=Msa0805030-mRNA-1:cds;Parent=Msa0805030-mRNA-1
chr5_3 three_prime_UTR 21439653 21440138 21439653 ID=Msa0805030-mRNA-1:three_prime_utr;Parent=Msa0805030-mRNA-1
Gene Sequence

>Msa0805030

ATGCCACCAAAGCCCTTAGACTATGAGTCGATTAATGAAAACGTGAAGAAGGCTCAGTATGCTGTCAGAGGTGAATTGTACCTTCGAGCTACCGAGCTTCAGAAGGAGGGCAAAAAGATTATATTCACTAATGTTGGAAACCCACATGCTTTGGGACAGAAACCACTGACCTTCCCTCGCCAGGTTGTTGCCTTGTGCCAGGCTCCATTCCTACTTGATGATCCTAACGTTGGACTGCTATTCCCCGCTGATGCAATTGCAAGAGCTAAGCAGTATCTCTCATTCACATCGGGTGGTTTAGGTGCATATAGTGATTCTCGAGGCACTCCAGCAGTGAGGAAGGAAGTGGCAGAGTTTATACAGAGGCGTGATGGTTATCCAAGTGATCCAGAGTTCATCTATCTTACTGATGGTGCGAGCAAGGCTGTGATGCAGATATTAAATACTATAATCAGAGGCGAAGGAGATGGGATTATGGTTCCAGTCCCACAATACCCACTCTACTCTGCAACAATTGCTCTTCTTGGTGGTACTCTTGTTCCATACTACCTCGAAGAGACAGCAAATTGGGGTCTTGATACTAATGAACTTCGAAAATCAGTTAGAGAGGCTCGCTATAAAGGATTAAATGTTAAAGCAATGGTGATCATAAATCCTGGAAACCCTACTGGCCAGTGCCTTAGTGAAGAGAATTTAAGAGAGGTTTTGCAATTTTGTTATGAAGAAAATTTAGTCTTGCTTGGAGATGAGGTTTACCAGACAAATATATATCAGGATGAGCGACCCTTCATTAGTGCCAAAAAGGTTTTGATGGATATGGGGCCACCTTTAAGCAATGAAGTCCAGCTTGTTTCTTTTCACTCAGTGTCGAAAGGGTATTTTGGTGAATGTGGACAACGTGGTGGATATTTTGAAATGACCAACATTCCTCCAGAGACAGTTGACGAGATCTATAAAGTTGCATCAATATCACTTAGTCCAAATGTTCCAGCACAAATATTTATGGGACTAATGATCAATCCACCCAAACCTGGAGATATTTCTTATGACCAATTTGTTAGGGAGAGCAAAGGAATACTTGAATCGCTAAGAAGAAGAGCAAGGATCATGACTGATGGATTCAACAGCTGCAGGAATGTTGTTTGTAATTTCACAGAAGGTGCCATGTATTCATTCCCTCAAATAAAACTGCCACCAAAAGCTTTAGAGACTGCTAAACAGGCTGGAAAGGCTGCAGATGTTTACTACTGTCTCAAGCTTTTGGAAGCCACTGGTATATCCACTGTTCCTGGTTCAGGATTTGGACAGAAAGAAGGGGTGTTCCATTTGAGGACAACTATATTACCAGCTGAGGAAGAAATGCCTGCTATTATGGATAGTTTCAAAAAGTTCAATGATGATTTCATGGAACAATATGATGACCACAGAGGTTATTCAAGGTTGTAA
Protein sequence

>Msa0805030

MPPKPLDYESINENVKKAQYAVRGELYLRATELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKQYLSFTSGGLGAYSDSRGTPAVRKEVAEFIQRRDGYPSDPEFIYLTDGASKAVMQILNTIIRGEGDGIMVPVPQYPLYSATIALLGGTLVPYYLEETANWGLDTNELRKSVREARYKGLNVKAMVIINPGNPTGQCLSEENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISAKKVLMDMGPPLSNEVQLVSFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQIFMGLMINPPKPGDISYDQFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFPQIKLPPKALETAKQAGKAADVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPAIMDSFKKFNDDFMEQYDDHRGYSRL*