Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0703730 | XP_013446797.1 | 99.729 | 369 | 1 | 0 | 1 | 369 | 1 | 369 | 0.0 | 768 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0703730 | sp|O24454|UBP3_ARATH | 88.889 | 369 | 37 | 3 | 1 | 365 | 1 | 369 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0703730 | A0A072TTI7 | 99.729 | 369 | 1 | 0 | 1 | 369 | 1 | 369 | 0.0 | 768 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074750 | Msa0703730 | 0.803433 | 3.494681e-49 | -8.615850e-47 |
| Msa0090030 | Msa0703730 | 0.804753 | 1.857092e-49 | -8.615850e-47 |
| Msa0092440 | Msa0703730 | 0.832214 | 1.074121e-55 | -8.615850e-47 |
| Msa0621240 | Msa0703730 | 0.848662 | 5.311966e-60 | -8.615850e-47 |
| Msa0653320 | Msa0703730 | -0.820928 | 5.292923e-53 | -8.615850e-47 |
| Msa0687450 | Msa0703730 | 0.815034 | 1.136946e-51 | -8.615850e-47 |
| Msa0703730 | Msa0830210 | 0.803554 | 3.298699e-49 | -8.615850e-47 |
| Msa0703730 | Msa0930820 | 0.835680 | 1.457447e-56 | -8.615850e-47 |
| Msa0703730 | Msa1036740 | 0.802790 | 4.745399e-49 | -8.615850e-47 |
| Msa0703730 | Msa1096550 | 0.842608 | 2.330477e-58 | -8.615850e-47 |
| Msa0703730 | Msa1122780 | 0.808981 | 2.371253e-50 | -8.615850e-47 |
| Msa0703730 | Msa1133570 | 0.813983 | 1.941425e-51 | -8.615850e-47 |
| Msa0703730 | Msa1174310 | 0.818687 | 1.720863e-52 | -8.615850e-47 |
| Msa0703730 | Msa1182640 | 0.806457 | 8.151348e-50 | -8.615850e-47 |
| Msa0703730 | Msa1306360 | 0.808049 | 3.749047e-50 | -8.615850e-47 |
| Msa0703730 | Msa1314770 | 0.802138 | 6.467274e-49 | -8.615850e-47 |
| Msa0703730 | Msa1363700 | 0.816304 | 5.923952e-52 | -8.615850e-47 |
| Msa0703730 | Msa1385350 | 0.811478 | 6.862773e-51 | -8.615850e-47 |
| Msa0703730 | Msa1393800 | 0.815957 | 7.083952e-52 | -8.615850e-47 |
| Msa0703730 | Msa1422840 | 0.801461 | 8.904779e-49 | -8.615850e-47 |
| Msa0703730 | Msa1458030 | 0.838698 | 2.464482e-57 | -8.615850e-47 |
| Msa0138210 | Msa0703730 | 0.829451 | 5.111311e-55 | -8.615850e-47 |
| Msa0175050 | Msa0703730 | 0.828210 | 1.020177e-54 | -8.615850e-47 |
| Msa0194720 | Msa0703730 | 0.866183 | 3.435573e-65 | -8.615850e-47 |
| Msa0236740 | Msa0703730 | 0.828090 | 1.090347e-54 | -8.615850e-47 |
| Msa0388220 | Msa0703730 | 0.800446 | 1.436041e-48 | -8.615850e-47 |
| Msa0436190 | Msa0703730 | 0.839941 | 1.172528e-57 | -8.615850e-47 |
| Msa0269520 | Msa0703730 | 0.831720 | 1.422332e-55 | -8.615850e-47 |
| Msa0524600 | Msa0703730 | 0.820510 | 6.603845e-53 | -8.615850e-47 |
| Msa0557950 | Msa0703730 | -0.807350 | 5.277332e-50 | -8.615850e-47 |
| Msa0572000 | Msa0703730 | 0.800332 | 1.514926e-48 | -8.615850e-47 |
| Msa0573040 | Msa0703730 | 0.814944 | 1.190092e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0703730 | MtrunA17_Chr8g0382161 | 99.729 | 369 | 1 | 0 | 1 | 369 | 1 | 369 | 0.0 | 768 |
| Msa0703730 | MtrunA17_Chr3g0123951 | 87.052 | 363 | 47 | 0 | 1 | 363 | 1 | 363 | 0.0 | 665 |
| Msa0703730 | MtrunA17_Chr6g0458441 | 30.704 | 355 | 191 | 10 | 17 | 364 | 121 | 427 | 1.85e-37 | 142 |
| Msa0703730 | MtrunA17_Chr4g0074041 | 30.682 | 352 | 192 | 10 | 24 | 365 | 93 | 402 | 5.82e-36 | 139 |
| Msa0703730 | MtrunA17_Chr3g0133061 | 29.462 | 353 | 198 | 10 | 21 | 365 | 582 | 891 | 1.82e-35 | 137 |
| Msa0703730 | MtrunA17_Chr5g0411271 | 29.971 | 347 | 187 | 9 | 24 | 364 | 155 | 451 | 3.67e-35 | 136 |
| Msa0703730 | MtrunA17_Chr6g0458421 | 29.775 | 356 | 193 | 11 | 17 | 364 | 23 | 329 | 2.44e-33 | 130 |
| Msa0703730 | MtrunA17_Chr5g0427301 | 28.857 | 350 | 199 | 10 | 23 | 365 | 542 | 848 | 1.93e-32 | 129 |
| Msa0703730 | MtrunA17_Chr6g0458431 | 29.310 | 348 | 191 | 11 | 24 | 364 | 95 | 394 | 7.54e-32 | 126 |
| Msa0703730 | MtrunA17_Chr1g0150541 | 29.321 | 324 | 181 | 9 | 24 | 334 | 182 | 470 | 1.49e-31 | 126 |
| Msa0703730 | MtrunA17_Chr2g0313171 | 29.714 | 350 | 196 | 10 | 24 | 365 | 465 | 772 | 1.82e-31 | 125 |
| Msa0703730 | MtrunA17_Chr1g0149991 | 29.223 | 373 | 182 | 15 | 16 | 340 | 176 | 514 | 5.74e-31 | 123 |
| Msa0703730 | MtrunA17_Chr5g0412381 | 28.483 | 323 | 192 | 8 | 23 | 338 | 424 | 714 | 7.06e-30 | 121 |
| Msa0703730 | MtrunA17_Chr2g0312901 | 27.083 | 336 | 198 | 6 | 23 | 342 | 22 | 326 | 8.86e-28 | 114 |
| Msa0703730 | MtrunA17_Chr1g0148321 | 29.747 | 316 | 172 | 8 | 24 | 330 | 108 | 382 | 1.51e-27 | 114 |
| Msa0703730 | MtrunA17_Chr3g0138791 | 29.841 | 315 | 173 | 9 | 24 | 330 | 108 | 382 | 1.54e-27 | 114 |
| Msa0703730 | MtrunA17_Chr8g0366721 | 27.011 | 348 | 187 | 10 | 24 | 364 | 213 | 500 | 1.80e-27 | 113 |
| Msa0703730 | MtrunA17_Chr4g0064671 | 26.639 | 244 | 114 | 4 | 169 | 360 | 13 | 243 | 2.11e-22 | 95.1 |
| Msa0703730 | MtrunA17_Chr8g0365831 | 26.781 | 351 | 198 | 14 | 24 | 364 | 165 | 466 | 2.35e-20 | 92.4 |
| Msa0703730 | MtrunA17_Chr5g0439971 | 27.434 | 339 | 191 | 12 | 22 | 347 | 203 | 499 | 2.96e-20 | 92.8 |
| Msa0703730 | MtrunA17_Chr1g0170261 | 26.706 | 337 | 192 | 11 | 24 | 347 | 202 | 496 | 6.10e-20 | 91.7 |
| Msa0703730 | MtrunA17_Chr7g0255591 | 33.129 | 163 | 87 | 6 | 208 | 363 | 754 | 901 | 2.41e-17 | 84.0 |
| Msa0703730 | MtrunA17_Chr7g0267641 | 33.333 | 168 | 87 | 7 | 204 | 363 | 787 | 937 | 1.07e-14 | 75.9 |
| Msa0703730 | MtrunA17_Chr2g0322211 | 31.677 | 161 | 90 | 6 | 208 | 363 | 717 | 862 | 1.12e-14 | 75.5 |
| Msa0703730 | MtrunA17_Chr1g0189101 | 31.638 | 177 | 100 | 6 | 194 | 364 | 751 | 912 | 1.92e-14 | 75.1 |
| Msa0703730 | MtrunA17_Chr1g0189101 | 28.019 | 207 | 135 | 6 | 19 | 218 | 314 | 513 | 3.51e-11 | 64.7 |
| Msa0703730 | MtrunA17_Chr4g0062561 | 24.507 | 355 | 180 | 14 | 24 | 360 | 254 | 538 | 2.07e-13 | 71.6 |
| Msa0703730 | MtrunA17_Chr4g0062561 | 28.659 | 164 | 105 | 5 | 181 | 338 | 683 | 840 | 6.83e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0703730 | AT4G39910.1 | 88.889 | 369 | 37 | 3 | 1 | 365 | 1 | 369 | 0.0 | 674 |
| Msa0703730 | AT2G22310.1 | 88.493 | 365 | 39 | 2 | 1 | 364 | 1 | 363 | 0.0 | 669 |
| Msa0703730 | AT2G22310.3 | 87.273 | 330 | 39 | 2 | 36 | 364 | 4 | 331 | 0.0 | 595 |
| Msa0703730 | AT2G22310.2 | 87.423 | 326 | 38 | 2 | 40 | 364 | 3 | 326 | 0.0 | 589 |
| Msa0703730 | AT4G24560.1 | 27.011 | 348 | 207 | 9 | 24 | 365 | 543 | 849 | 8.70e-34 | 133 |
| Msa0703730 | AT5G57990.1 | 28.280 | 343 | 197 | 12 | 24 | 360 | 108 | 407 | 2.17e-33 | 132 |
| Msa0703730 | AT5G65450.2 | 30.380 | 316 | 180 | 9 | 23 | 330 | 348 | 631 | 9.89e-32 | 127 |
| Msa0703730 | AT5G65450.1 | 30.380 | 316 | 180 | 9 | 23 | 330 | 329 | 612 | 1.04e-31 | 127 |
| Msa0703730 | AT3G14400.1 | 29.607 | 331 | 200 | 5 | 23 | 342 | 24 | 332 | 1.46e-31 | 126 |
| Msa0703730 | AT2G24640.2 | 27.966 | 354 | 205 | 12 | 24 | 369 | 5 | 316 | 1.72e-30 | 122 |
| Msa0703730 | AT2G24640.1 | 27.966 | 354 | 205 | 12 | 24 | 369 | 175 | 486 | 3.19e-30 | 122 |
| Msa0703730 | AT1G17110.3 | 28.116 | 345 | 198 | 10 | 24 | 360 | 439 | 741 | 6.70e-30 | 121 |
| Msa0703730 | AT1G17110.1 | 28.116 | 345 | 198 | 10 | 24 | 360 | 439 | 741 | 6.70e-30 | 121 |
| Msa0703730 | AT1G17110.2 | 28.116 | 345 | 198 | 10 | 24 | 360 | 443 | 745 | 8.25e-30 | 121 |
| Msa0703730 | AT4G31670.1 | 27.044 | 318 | 196 | 9 | 24 | 334 | 169 | 457 | 1.57e-29 | 120 |
| Msa0703730 | AT4G17895.1 | 29.261 | 352 | 187 | 11 | 24 | 364 | 177 | 477 | 1.69e-26 | 111 |
| Msa0703730 | AT3G49600.2 | 27.515 | 338 | 195 | 8 | 24 | 352 | 107 | 403 | 7.65e-26 | 109 |
| Msa0703730 | AT3G49600.1 | 27.515 | 338 | 195 | 8 | 24 | 352 | 107 | 403 | 7.65e-26 | 109 |
| Msa0703730 | AT3G49600.3 | 27.515 | 338 | 195 | 8 | 24 | 352 | 107 | 403 | 8.42e-26 | 109 |
| Msa0703730 | AT5G46740.1 | 29.513 | 349 | 196 | 11 | 24 | 364 | 164 | 470 | 1.16e-23 | 103 |
| Msa0703730 | AT4G30890.1 | 27.273 | 374 | 218 | 16 | 24 | 363 | 198 | 551 | 3.66e-23 | 101 |
| Msa0703730 | AT4G30890.2 | 27.273 | 374 | 218 | 16 | 24 | 363 | 198 | 551 | 3.66e-23 | 101 |
| Msa0703730 | AT4G30890.3 | 27.273 | 374 | 218 | 16 | 24 | 363 | 198 | 551 | 3.66e-23 | 101 |
| Msa0703730 | AT3G11910.3 | 27.114 | 343 | 195 | 12 | 22 | 351 | 197 | 497 | 4.08e-20 | 92.8 |
| Msa0703730 | AT3G11910.1 | 27.114 | 343 | 195 | 12 | 22 | 351 | 197 | 497 | 4.08e-20 | 92.8 |
| Msa0703730 | AT3G11910.4 | 27.114 | 343 | 195 | 12 | 22 | 351 | 196 | 496 | 4.23e-20 | 92.8 |
| Msa0703730 | AT3G11910.2 | 27.114 | 343 | 195 | 12 | 22 | 351 | 196 | 496 | 4.23e-20 | 92.8 |
| Msa0703730 | AT5G06600.1 | 27.139 | 339 | 192 | 12 | 22 | 347 | 198 | 494 | 1.39e-19 | 91.3 |
| Msa0703730 | AT5G06600.2 | 27.139 | 339 | 192 | 12 | 22 | 347 | 197 | 493 | 1.43e-19 | 91.3 |
| Msa0703730 | AT5G06600.3 | 27.139 | 339 | 192 | 12 | 22 | 347 | 198 | 494 | 1.61e-19 | 90.9 |
| Msa0703730 | AT5G10790.2 | 24.403 | 377 | 203 | 9 | 16 | 339 | 43 | 390 | 2.68e-19 | 89.4 |
| Msa0703730 | AT5G10790.1 | 24.403 | 377 | 203 | 9 | 16 | 339 | 172 | 519 | 7.68e-19 | 88.6 |
| Msa0703730 | AT5G46740.2 | 32.323 | 198 | 112 | 6 | 173 | 364 | 80 | 261 | 1.81e-16 | 81.3 |
| Msa0703730 | AT2G40930.1 | 31.250 | 160 | 88 | 6 | 208 | 360 | 769 | 913 | 4.96e-15 | 77.0 |
| Msa0703730 | AT2G40930.2 | 31.250 | 160 | 88 | 6 | 208 | 360 | 769 | 913 | 4.96e-15 | 77.0 |
| Msa0703730 | AT5G22030.1 | 31.325 | 166 | 93 | 6 | 204 | 363 | 719 | 869 | 1.63e-14 | 75.5 |
| Msa0703730 | AT5G22030.2 | 31.325 | 166 | 93 | 6 | 204 | 363 | 761 | 911 | 1.75e-14 | 75.5 |
| Msa0703730 | AT4G10590.4 | 33.735 | 166 | 89 | 6 | 204 | 363 | 744 | 894 | 2.35e-14 | 75.1 |
| Msa0703730 | AT4G10590.3 | 33.735 | 166 | 89 | 6 | 204 | 363 | 744 | 894 | 2.35e-14 | 75.1 |
| Msa0703730 | AT4G10590.1 | 33.735 | 166 | 89 | 6 | 204 | 363 | 744 | 894 | 2.35e-14 | 75.1 |
| Msa0703730 | AT4G10590.2 | 33.735 | 166 | 89 | 6 | 204 | 363 | 744 | 894 | 2.35e-14 | 75.1 |
| Msa0703730 | AT4G10570.1 | 33.133 | 166 | 90 | 6 | 204 | 363 | 745 | 895 | 3.45e-14 | 74.7 |
| Msa0703730 | AT1G32850.1 | 31.953 | 169 | 90 | 7 | 203 | 363 | 729 | 880 | 4.14e-13 | 71.2 |
Find 102 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAGTCGTAGAAAGTTTC+TGG | 0.174537 | 4_4:-75760327 | None:intergenic |
| TTGTGTACCCAAGTAATTAA+AGG | 0.260330 | 4_4:-75764139 | None:intergenic |
| GATGCTGAATTGTTACAAAA+AGG | 0.268143 | 4_4:-75766303 | None:intergenic |
| GTAATTAAAGGCTCTTTCTT+AGG | 0.269652 | 4_4:-75764127 | None:intergenic |
| GAAAATGAGCTAAAAGTTTC+AGG | 0.273644 | 4_4:+75766141 | Msa0703730:three_prime_UTR |
| TCTGAAGGTGTTGGTGTCTC+TGG | 0.275197 | 4_4:-75764064 | None:intergenic |
| TGTTAACCTTTGTGTATAAT+AGG | 0.276721 | 4_4:+75766395 | Msa0703730:three_prime_UTR |
| TCCGCCGTGCAAACGTTCTT+TGG | 0.310357 | 4_4:+75765341 | Msa0703730:CDS |
| CCAAAGTAACGTTCTCCTTC+AGG | 0.310974 | 4_4:-75760488 | None:intergenic |
| GAATGAACTTGTCGACATTC+TGG | 0.315995 | 4_4:+75764012 | Msa0703730:CDS |
| GAACAACTGCTGGAGTATTA+TGG | 0.316104 | 4_4:+75761317 | Msa0703730:CDS |
| AACGTTCTCCTTCAGGGAAT+TGG | 0.317047 | 4_4:-75760481 | None:intergenic |
| CTCCATCTAGTTACTGTTAC+CGG | 0.321318 | 4_4:-75765429 | None:intergenic |
| CAACCTCTGTACAAATCGTT+TGG | 0.322213 | 4_4:-75762133 | None:intergenic |
| ACATCTTGCTCTTGATTGCT+TGG | 0.327104 | 4_4:-75766191 | None:intergenic |
| AAGGAAATGTTGGAGGAAAT+TGG | 0.331629 | 4_4:-75760216 | None:intergenic |
| TCATTCTGTAACAAATTTCA+TGG | 0.333134 | 4_4:+75760345 | Msa0703730:five_prime_UTR |
| TTGTAACAATTCAGCATCAT+AGG | 0.341900 | 4_4:+75766308 | Msa0703730:three_prime_UTR |
| TACTTTGGTCTTGAGAATTT+CGG | 0.342794 | 4_4:+75760503 | Msa0703730:CDS |
| AAAGAAACCTCCTCACATTC+TGG | 0.344711 | 4_4:+75765070 | Msa0703730:CDS |
| AGAAAGAGCCTTTAATTACT+TGG | 0.355430 | 4_4:+75764131 | Msa0703730:CDS |
| TATGGAAATAACAAAACCTT+AGG | 0.373430 | 4_4:+75761335 | Msa0703730:CDS |
| TTGCAAGCACCTTGTCTCAT+TGG | 0.375899 | 4_4:-75764346 | None:intergenic |
| TTCAAGAATGGTCATGCTAA+TGG | 0.388068 | 4_4:+75764103 | Msa0703730:CDS |
| TCCATTTCGGGAACAACTGC+TGG | 0.393629 | 4_4:+75761307 | Msa0703730:CDS |
| AACCTCTGTACAAATCGTTT+GGG | 0.398526 | 4_4:-75762132 | None:intergenic |
| GTTTAACTCAGGAGCAAAAT+CGG | 0.401853 | 4_4:+75766104 | Msa0703730:intron |
| CCTTCAGAAAAGGTTGCAAA+TGG | 0.403517 | 4_4:+75764079 | Msa0703730:CDS |
| TCCAGCAGTTGTTCCCGAAA+TGG | 0.416148 | 4_4:-75761308 | None:intergenic |
| CACGTGCTGATGGGTGCTGC+TGG | 0.422192 | 4_4:+75760431 | Msa0703730:exon |
| ATGGAAATAACAAAACCTTA+GGG | 0.426140 | 4_4:+75761336 | Msa0703730:CDS |
| GCTCTTGATTGCTTGGATGT+TGG | 0.441122 | 4_4:-75766184 | None:intergenic |
| TCTCAAGCGGTTTAAATACA+TGG | 0.443043 | 4_4:+75765100 | Msa0703730:CDS |
| CCTGAAGGAGAACGTTACTT+TGG | 0.445835 | 4_4:+75760488 | Msa0703730:CDS |
| GAAAGAGCCTTTAATTACTT+GGG | 0.460212 | 4_4:+75764132 | Msa0703730:CDS |
| GCCCGGTAACAGTAACTAGA+TGG | 0.460534 | 4_4:+75765427 | Msa0703730:exon |
| AGCAAAATCGGCTTGTATCA+TGG | 0.461580 | 4_4:+75766116 | Msa0703730:three_prime_UTR |
| CTTTCGTAGCTATATGCATC+AGG | 0.467030 | 4_4:+75762173 | Msa0703730:CDS |
| GTTTAAATACATGGAACAGC+TGG | 0.470114 | 4_4:+75765109 | Msa0703730:CDS |
| ATGAGTCGTAGAAAGTTTCT+GGG | 0.470598 | 4_4:-75760326 | None:intergenic |
| ACCGAGTGCCTTCTCAAGCT+TGG | 0.472929 | 4_4:-75760456 | None:intergenic |
| TATTGAGTATTCTCTATTTG+CGG | 0.483092 | 4_4:+75765208 | Msa0703730:CDS |
| CAAAGTAACGTTCTCCTTCA+GGG | 0.493408 | 4_4:-75760487 | None:intergenic |
| GACACCAACACCTTCAGAAA+AGG | 0.494615 | 4_4:+75764069 | Msa0703730:CDS |
| CTGACATAATGCCCATGGTT+GGG | 0.500962 | 4_4:-75765254 | None:intergenic |
| CATTCTGGAGAAAGAGGCTC+AGG | 0.502874 | 4_4:+75764027 | Msa0703730:CDS |
| TTAGAATCGCTGAGTTGAAT+CGG | 0.505746 | 4_4:+75760368 | Msa0703730:five_prime_UTR |
| GTAAATGCAGAAGGAAATGT+TGG | 0.506408 | 4_4:-75760226 | None:intergenic |
| TTCTATGAGAGCATTGGGCC+CGG | 0.506913 | 4_4:+75765410 | Msa0703730:CDS |
| GTTGCAAATGGGTTCAAGAA+TGG | 0.518444 | 4_4:+75764091 | Msa0703730:CDS |
| GACATTGACGCACGTGCTGA+TGG | 0.519860 | 4_4:+75760421 | Msa0703730:exon |
| TATTACTCAGCTTCAGCTCA+AGG | 0.525905 | 4_4:-75765169 | None:intergenic |
| GTTGGCAGTGGTCCCAACCA+TGG | 0.526315 | 4_4:+75765242 | Msa0703730:CDS |
| CTTCAGAAAAGGTTGCAAAT+GGG | 0.537604 | 4_4:+75764080 | Msa0703730:CDS |
| AGTTCGCAGAAGAAGAAAAC+CGG | 0.539192 | 4_4:+75762099 | Msa0703730:CDS |
| TAACAAAACCTTAGGGGATG+CGG | 0.540455 | 4_4:+75761343 | Msa0703730:CDS |
| TATTCAACTAACACCGACCA+TGG | 0.551966 | 4_4:+75765377 | Msa0703730:CDS |
| TTCTGGTCATTCATCTCAAG+CGG | 0.553690 | 4_4:+75765087 | Msa0703730:CDS |
| ATCGCTGAGTTGAATCGGTT+AGG | 0.557446 | 4_4:+75760373 | Msa0703730:five_prime_UTR |
| TGTCGACATTCTGGAGAAAG+AGG | 0.558202 | 4_4:+75764021 | Msa0703730:CDS |
| AACGTTCTTTGGATCACCAC+AGG | 0.559651 | 4_4:+75765352 | Msa0703730:CDS |
| TTGGCAGTGGTCCCAACCAT+GGG | 0.561554 | 4_4:+75765243 | Msa0703730:CDS |
| ATTACTCAGCTTCAGCTCAA+GGG | 0.562003 | 4_4:-75765168 | None:intergenic |
| TCCATCTAGTTACTGTTACC+GGG | 0.563825 | 4_4:-75765428 | None:intergenic |
| TGCTGGTTCCAAGCTTGAGA+AGG | 0.565161 | 4_4:+75760448 | Msa0703730:CDS |
| ACATTGACGCACGTGCTGAT+GGG | 0.566312 | 4_4:+75760422 | Msa0703730:exon |
| CAAGATGTGGAGGTGCACTA+AGG | 0.567441 | 4_4:+75766206 | Msa0703730:three_prime_UTR |
| GTAGTTGTTCATGTTGGCAG+TGG | 0.568127 | 4_4:+75765230 | Msa0703730:CDS |
| TTTGCGGTAGTTGTTCATGT+TGG | 0.570867 | 4_4:+75765224 | Msa0703730:CDS |
| CTCCCAAACGATTTGTACAG+AGG | 0.577523 | 4_4:+75762130 | Msa0703730:CDS |
| TCCAAGCTTGAGAAGGCACT+CGG | 0.581992 | 4_4:+75760455 | Msa0703730:CDS |
| AATGCAGAAGGAAATGTTGG+AGG | 0.589360 | 4_4:-75760223 | None:intergenic |
| TTACTCAGCTTCAGCTCAAG+GGG | 0.593719 | 4_4:-75765167 | None:intergenic |
| TTGTGAAAAGCCATAACCAC+TGG | 0.595274 | 4_4:+75765279 | Msa0703730:CDS |
| TTTAAATACATGGAACAGCT+GGG | 0.600093 | 4_4:+75765110 | Msa0703730:CDS |
| TATCGCGGAAGAATGAAATG+AGG | 0.601707 | 4_4:-75760290 | None:intergenic |
| AATGTGAAACTGTGACAGCT+AGG | 0.603275 | 4_4:+75764367 | Msa0703730:CDS |
| ATCGCGGAAGAATGAAATGA+GGG | 0.605326 | 4_4:-75760289 | None:intergenic |
| CATAGAACAAAATGTACCCA+TGG | 0.607092 | 4_4:-75765394 | None:intergenic |
| CGTGTGCCTATTATACACAA+AGG | 0.607102 | 4_4:-75766401 | None:intergenic |
| CTCGGTGACCAATTCCCTGA+AGG | 0.615354 | 4_4:+75760473 | Msa0703730:CDS |
| GCGCAAGTTGTAAATGCAGA+AGG | 0.617202 | 4_4:-75760235 | None:intergenic |
| GCTGACATAATGCCCATGGT+TGG | 0.618993 | 4_4:-75765255 | None:intergenic |
| CAAGGCTGACATAATGCCCA+TGG | 0.620655 | 4_4:-75765259 | None:intergenic |
| CAATCAAGAGCAAGATGTGG+AGG | 0.631447 | 4_4:+75766196 | Msa0703730:three_prime_UTR |
| CTCCGCATTCAACGTCTCAG+TGG | 0.635411 | 4_4:-75764466 | None:intergenic |
| CACTGAGACGTTGAATGCGG+AGG | 0.643034 | 4_4:+75764467 | Msa0703730:CDS |
| TGGAAATAACAAAACCTTAG+GGG | 0.647882 | 4_4:+75761337 | Msa0703730:CDS |
| ATTCAACTAACACCGACCAT+GGG | 0.648378 | 4_4:+75765378 | Msa0703730:CDS |
| GTGTTAGTTGAATATTCCTG+TGG | 0.649469 | 4_4:-75765368 | None:intergenic |
| TCGTTTGGGAGCAATGACAC+CGG | 0.652677 | 4_4:-75762118 | None:intergenic |
| TTCCACTGAGACGTTGAATG+CGG | 0.653862 | 4_4:+75764464 | Msa0703730:CDS |
| AAGCAATCAAGAGCAAGATG+TGG | 0.654206 | 4_4:+75766193 | Msa0703730:three_prime_UTR |
| ATGTGAAACTGTGACAGCTA+GGG | 0.662477 | 4_4:+75764368 | Msa0703730:CDS |
| TGATCCAAAGAACGTTTGCA+CGG | 0.665690 | 4_4:-75765345 | None:intergenic |
| GAACAAAATGTACCCATGGT+CGG | 0.668984 | 4_4:-75765390 | None:intergenic |
| CGGTAACAGTAACTAGATGG+AGG | 0.677786 | 4_4:+75765430 | Msa0703730:exon |
| TGAATGACCAGAATGTGAGG+AGG | 0.681890 | 4_4:-75765077 | None:intergenic |
| GGTAAGACAACTTCTTGTAG+CGG | 0.683615 | 4_4:-75765133 | None:intergenic |
| AGATGAATGACCAGAATGTG+AGG | 0.695994 | 4_4:-75765080 | None:intergenic |
| GAATACTCACCAATGAGACA+AGG | 0.708354 | 4_4:+75764337 | Msa0703730:CDS |
| TCCAAAGAACGTTTGCACGG+CGG | 0.730946 | 4_4:-75765342 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGTTATTAAAGAAAATA+TGG | - | chr4_4:75761690-75761709 | None:intergenic | 10.0% |
| !! | AAATAAAAAATAAGAAAATC+TGG | - | chr4_4:75761717-75761736 | None:intergenic | 10.0% |
| !! | ATTAACTATTATTATATATC+CGG | + | chr4_4:75763515-75763534 | Msa0703730:intron | 10.0% |
| !! | AAAAAATGACAAAAAAAAAT+TGG | - | chr4_4:75764188-75764207 | None:intergenic | 10.0% |
| !! | AAATTCAGAAAAGAAAAAAA+TGG | - | chr4_4:75760673-75760692 | None:intergenic | 15.0% |
| !! | TAATTGTTGAATAATCTATA+AGG | + | chr4_4:75760727-75760746 | Msa0703730:intron | 15.0% |
| !! | TAATACTTAGAATCATAATT+AGG | - | chr4_4:75761183-75761202 | None:intergenic | 15.0% |
| !! | ATATAAATAAGACATTAGTT+TGG | + | chr4_4:75762301-75762320 | Msa0703730:intron | 15.0% |
| !! | TTAATTCACAAAAACATTTA+AGG | + | chr4_4:75762632-75762651 | Msa0703730:intron | 15.0% |
| !!! | ACTTATAAATAATTTTTCAG+GGG | - | chr4_4:75762715-75762734 | None:intergenic | 15.0% |
| !!! | CACTTATAAATAATTTTTCA+GGG | - | chr4_4:75762716-75762735 | None:intergenic | 15.0% |
| !! | CTGAAAAATTATTTATAAGT+GGG | + | chr4_4:75762715-75762734 | Msa0703730:intron | 15.0% |
| !!! | TTTTTAACTTAAGCATTTAA+AGG | - | chr4_4:75762914-75762933 | None:intergenic | 15.0% |
| !! | TTAATAATGTAAAGTGATAA+GGG | - | chr4_4:75763580-75763599 | None:intergenic | 15.0% |
| !! | GAAAAGAAAAAAAAACTAAT+TGG | - | chr4_4:75763651-75763670 | None:intergenic | 15.0% |
| !!! | TGTTAATTTTAATGTATCAT+TGG | + | chr4_4:75763885-75763904 | Msa0703730:intron | 15.0% |
| !! | TTAGATTTATATCTATATTG+TGG | + | chr4_4:75764283-75764302 | Msa0703730:intron | 15.0% |
| !!! | TTGAATATCATGTATATTTT+TGG | + | chr4_4:75764815-75764834 | Msa0703730:intron | 15.0% |
| !!! | TTTTACAATGAAAAACTTAA+TGG | - | chr4_4:75766371-75766390 | None:intergenic | 15.0% |
| !!! | AAACTCTTCAAAAATTTGTT+TGG | - | chr4_4:75760708-75760727 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTATTTACCTGTT+TGG | + | chr4_4:75760750-75760769 | Msa0703730:intron | 20.0% |
| !! | TAAGTATTAAGTTTGAAGAT+GGG | + | chr4_4:75761194-75761213 | Msa0703730:intron | 20.0% |
| !!! | GTTTGTTTGTTATATTTTTG+TGG | + | chr4_4:75761216-75761235 | Msa0703730:intron | 20.0% |
| !! | AAAAAATAAGAAAATCTGGT+AGG | - | chr4_4:75761713-75761732 | None:intergenic | 20.0% |
| !!! | TTATACAAATGATTTGTTTC+AGG | - | chr4_4:75761980-75761999 | None:intergenic | 20.0% |
| !! | GAAATAAATATGTTGAATTC+AGG | - | chr4_4:75762065-75762084 | None:intergenic | 20.0% |
| !!! | TTCAACATATTTATTTCTGT+TGG | + | chr4_4:75762068-75762087 | Msa0703730:intron | 20.0% |
| !!! | CCACTTATAAATAATTTTTC+AGG | - | chr4_4:75762717-75762736 | None:intergenic | 20.0% |
| !! | CCTGAAAAATTATTTATAAG+TGG | + | chr4_4:75762714-75762733 | Msa0703730:intron | 20.0% |
| !! | AAAAATTATTTATAAGTGGG+AGG | + | chr4_4:75762718-75762737 | Msa0703730:intron | 20.0% |
| !! | ATAAACATTTGCAATATCAT+TGG | + | chr4_4:75763185-75763204 | Msa0703730:intron | 20.0% |
| !! | ATGAAAAAGTAGTTATAAGT+GGG | + | chr4_4:75763414-75763433 | Msa0703730:intron | 20.0% |
| !!! | TCATATCTAAAGTCTTAATT+TGG | - | chr4_4:75763490-75763509 | None:intergenic | 20.0% |
| !! | CTTAATAATGTAAAGTGATA+AGG | - | chr4_4:75763581-75763600 | None:intergenic | 20.0% |
| !! | TATTTCATCATAGAATGAAA+AGG | - | chr4_4:75763678-75763697 | None:intergenic | 20.0% |
| !! | TAAAAACTAGACAAAATATG+AGG | - | chr4_4:75763921-75763940 | None:intergenic | 20.0% |
| !! | ATAAATTGTGAACTTTGTAA+TGG | + | chr4_4:75764237-75764256 | Msa0703730:intron | 20.0% |
| !! | AAATAAATAGAGAAACTAGA+TGG | - | chr4_4:75765503-75765522 | None:intergenic | 20.0% |
| !!! | AAGAGAACCAAATTATTTTT+TGG | + | chr4_4:75765953-75765972 | Msa0703730:intron | 20.0% |
| !! | CTTTGAACCAAAAAATAATT+TGG | - | chr4_4:75765963-75765982 | None:intergenic | 20.0% |
| !!! | TTCAAAGTTTTTATTTTCGT+AGG | + | chr4_4:75765976-75765995 | Msa0703730:intron | 20.0% |
| ! | TCATTCTGTAACAAATTTCA+TGG | + | chr4_4:75760345-75760364 | Msa0703730:five_prime_UTR | 25.0% |
| ! | TCAAATAATCAAATCCAAAC+AGG | - | chr4_4:75760767-75760786 | None:intergenic | 25.0% |
| !!! | TATAGCGATTAGTCTAAATT+CGG | - | chr4_4:75761029-75761048 | None:intergenic | 25.0% |
| ! | TTGCAAATCACAAAAAACAA+CGG | - | chr4_4:75761096-75761115 | None:intergenic | 25.0% |
| ! | CTAAGTATTAAGTTTGAAGA+TGG | + | chr4_4:75761193-75761212 | Msa0703730:intron | 25.0% |
| !!! | TATATTTTTGTGGAGATTTC+TGG | + | chr4_4:75761226-75761245 | Msa0703730:intron | 25.0% |
| !!! | ATATTTTTGTGGAGATTTCT+GGG | + | chr4_4:75761227-75761246 | Msa0703730:intron | 25.0% |
| !! | TATACTTTTGTGTTCCATTT+CGG | + | chr4_4:75761294-75761313 | Msa0703730:CDS | 25.0% |
| ! | TATGGAAATAACAAAACCTT+AGG | + | chr4_4:75761335-75761354 | Msa0703730:CDS | 25.0% |
| ! | ATGGAAATAACAAAACCTTA+GGG | + | chr4_4:75761336-75761355 | Msa0703730:CDS | 25.0% |
| !! | TCAAATATGAAAAAGCATAG+AGG | - | chr4_4:75761456-75761475 | None:intergenic | 25.0% |
| !!! | TGGTTTTAAAACCAAAACTA+AGG | - | chr4_4:75761670-75761689 | None:intergenic | 25.0% |
| ! | ACACAAACAATAACAGAAAA+AGG | - | chr4_4:75761740-75761759 | None:intergenic | 25.0% |
| !! | ACAAGTTGAGAATAAAAGAT+AGG | + | chr4_4:75761791-75761810 | Msa0703730:intron | 25.0% |
| !! | CAAGTTGAGAATAAAAGATA+GGG | + | chr4_4:75761792-75761811 | Msa0703730:intron | 25.0% |
| !! | AGATATAGTTGATACTTGAT+AGG | - | chr4_4:75762005-75762024 | None:intergenic | 25.0% |
| ! | GAACTTATTCTTAACACTTA+TGG | - | chr4_4:75762210-75762229 | None:intergenic | 25.0% |
| !! | ATAAGACATTAGTTTGGATA+TGG | + | chr4_4:75762307-75762326 | Msa0703730:intron | 25.0% |
| !! | TAAGACATTAGTTTGGATAT+GGG | + | chr4_4:75762308-75762327 | Msa0703730:intron | 25.0% |
| ! | CAAGGAAATGTAAATAAACA+TGG | - | chr4_4:75762403-75762422 | None:intergenic | 25.0% |
| ! | AGAGATGCTATTATCTATAT+TGG | + | chr4_4:75762461-75762480 | Msa0703730:intron | 25.0% |
| ! | ACAGAATAAAAAAGTAACAC+TGG | - | chr4_4:75762553-75762572 | None:intergenic | 25.0% |
| !!! | TGTTACTTTTTTATTCTGTC+AGG | + | chr4_4:75762554-75762573 | Msa0703730:intron | 25.0% |
| !!! | TTGTTTTTCTCAATTGCAAA+GGG | + | chr4_4:75763034-75763053 | Msa0703730:intron | 25.0% |
| ! | TAGAACTTACATTCAATTCT+TGG | - | chr4_4:75763133-75763152 | None:intergenic | 25.0% |
| ! | AAATGTTTATAATGACACAG+TGG | - | chr4_4:75763175-75763194 | None:intergenic | 25.0% |
| ! | AACACAAATTTATAACCTGA+AGG | + | chr4_4:75763347-75763366 | Msa0703730:intron | 25.0% |
| ! | ACACAAATTTATAACCTGAA+GGG | + | chr4_4:75763348-75763367 | Msa0703730:intron | 25.0% |
| !!! | TTATAAATTTGTGTTGACTC+TGG | - | chr4_4:75763342-75763361 | None:intergenic | 25.0% |
| ! | CATGAAAAAGTAGTTATAAG+TGG | + | chr4_4:75763413-75763432 | Msa0703730:intron | 25.0% |
| !! | ATCTAAAGTCTTAATTTGGT+CGG | - | chr4_4:75763486-75763505 | None:intergenic | 25.0% |
| ! | AACTATTATTATATATCCGG+TGG | + | chr4_4:75763518-75763537 | Msa0703730:intron | 25.0% |
| ! | AATAATTCTGTAACTGATGT+TGG | + | chr4_4:75763694-75763713 | Msa0703730:intron | 25.0% |
| ! | ATAATTCTGTAACTGATGTT+GGG | + | chr4_4:75763695-75763714 | Msa0703730:intron | 25.0% |
| ! | TAATACAACAATGTTACTGT+CGG | + | chr4_4:75763943-75763962 | Msa0703730:intron | 25.0% |
| ! | TAAAAAGTTCAAGAATTCGT+GGG | - | chr4_4:75763990-75764009 | None:intergenic | 25.0% |
| !! | AGGTATATGCTTTTATATTG+TGG | + | chr4_4:75764516-75764535 | Msa0703730:intron | 25.0% |
| ! | TGAACAGATATCTGAAAATT+TGG | - | chr4_4:75764684-75764703 | None:intergenic | 25.0% |
| !!! | ATTTTAGTAGTTTCCTGTAA+AGG | + | chr4_4:75764714-75764733 | Msa0703730:intron | 25.0% |
| ! | CAGTTAAAAGTAGAAAACAA+TGG | - | chr4_4:75764749-75764768 | None:intergenic | 25.0% |
| !!! | CATTGTTTTCTACTTTTAAC+TGG | + | chr4_4:75764747-75764766 | Msa0703730:intron | 25.0% |
| ! | AGAGGGAAATAAAATAAATG+TGG | + | chr4_4:75764770-75764789 | Msa0703730:intron | 25.0% |
| !! | TTTGCTTGTTGAAAATGAAA+AGG | - | chr4_4:75764852-75764871 | None:intergenic | 25.0% |
| ! | ATGGAAAAACAAACATGTTA+CGG | - | chr4_4:75764875-75764894 | None:intergenic | 25.0% |
| !!! | ATGTTTGTTTTTCCATTGAT+TGG | + | chr4_4:75764879-75764898 | Msa0703730:intron | 25.0% |
| ! | TATTGAGTATTCTCTATTTG+CGG | + | chr4_4:75765208-75765227 | Msa0703730:CDS | 25.0% |
| !!! | TTTTAGGTACTCAAATCATT+TGG | + | chr4_4:75765466-75765485 | Msa0703730:intron | 25.0% |
| ! | CAATAAGAGCAGTATATATA+TGG | + | chr4_4:75765679-75765698 | Msa0703730:intron | 25.0% |
| !! | TTTCATTGTGTTTCTAATGT+TGG | - | chr4_4:75765752-75765771 | None:intergenic | 25.0% |
| ! | TCTATAGTTATGTTTGTGTT+TGG | + | chr4_4:75765821-75765840 | Msa0703730:intron | 25.0% |
| ! | CTATAGTTATGTTTGTGTTT+GGG | + | chr4_4:75765822-75765841 | Msa0703730:intron | 25.0% |
| ! | TATAGTTATGTTTGTGTTTG+GGG | + | chr4_4:75765823-75765842 | Msa0703730:intron | 25.0% |
| ! | ACATTTCATATGTTTAACTC+AGG | + | chr4_4:75766093-75766112 | Msa0703730:intron | 25.0% |
| ! | TGTTAACCTTTGTGTATAAT+AGG | + | chr4_4:75766395-75766414 | Msa0703730:three_prime_UTR | 25.0% |
| !! | TACTTTGGTCTTGAGAATTT+CGG | + | chr4_4:75760503-75760522 | Msa0703730:CDS | 30.0% |
| ! | TTATTGTAACAGCGTTTTAC+AGG | + | chr4_4:75760535-75760554 | Msa0703730:CDS | 30.0% |
| ! | CACTACGATTTAGAATGAAT+CGG | - | chr4_4:75760597-75760616 | None:intergenic | 30.0% |
| ATTTAGACTAATCGCTATAG+TGG | + | chr4_4:75761030-75761049 | Msa0703730:intron | 30.0% | |
| ! | ATTAAGTTGTTCTTCCAAAC+AGG | + | chr4_4:75761157-75761176 | Msa0703730:intron | 30.0% |
| ! | ATACTTTTGTGTTCCATTTC+GGG | + | chr4_4:75761295-75761314 | Msa0703730:CDS | 30.0% |
| TGGAAATAACAAAACCTTAG+GGG | + | chr4_4:75761337-75761356 | Msa0703730:CDS | 30.0% | |
| CAGGTAATCAATTTGTAGTT+TGG | + | chr4_4:75761404-75761423 | Msa0703730:intron | 30.0% | |
| ! | TGGAAATTTTGTGCATTACA+TGG | + | chr4_4:75761424-75761443 | Msa0703730:intron | 30.0% |
| TGCATTGTCTTCACTAATTT+CGG | + | chr4_4:75761508-75761527 | Msa0703730:intron | 30.0% | |
| !! | GTTTTTGCTATCCTTAGTTT+TGG | + | chr4_4:75761656-75761675 | Msa0703730:intron | 30.0% |
| TGTTATTGTTTGTGTGTTGA+AGG | + | chr4_4:75761745-75761764 | Msa0703730:intron | 30.0% | |
| CACAAAGTAAACTCTATTGT+TGG | - | chr4_4:75761946-75761965 | None:intergenic | 30.0% | |
| ACAATAGAGTTTACTTTGTG+AGG | + | chr4_4:75761946-75761965 | Msa0703730:intron | 30.0% | |
| TGAATAACAATTCGATGTAC+AGG | - | chr4_4:75762232-75762251 | None:intergenic | 30.0% | |
| AGATAATAGCATCTCTAACT+AGG | - | chr4_4:75762457-75762476 | None:intergenic | 30.0% | |
| !!! | ACTTTTTTATTCTGTCAGGT+TGG | + | chr4_4:75762558-75762577 | Msa0703730:intron | 30.0% |
| !!! | CTTACAAGCTTAGTTTTGTA+GGG | + | chr4_4:75762751-75762770 | Msa0703730:intron | 30.0% |
| !! | TGAAAGCAAATTCTAAGATG+AGG | + | chr4_4:75762888-75762907 | Msa0703730:intron | 30.0% |
| GATATTTATTTGTGATGCAG+TGG | + | chr4_4:75763001-75763020 | Msa0703730:intron | 30.0% | |
| !! | CTTGTTTTTCTCAATTGCAA+AGG | + | chr4_4:75763033-75763052 | Msa0703730:intron | 30.0% |
| GAAATACGATAATGCAGAAA+AGG | + | chr4_4:75763102-75763121 | Msa0703730:intron | 30.0% | |
| !! | AAATTTGTGTTGACTCTTGT+GGG | - | chr4_4:75763338-75763357 | None:intergenic | 30.0% |
| !! | TAAATTTGTGTTGACTCTTG+TGG | - | chr4_4:75763339-75763358 | None:intergenic | 30.0% |
| TAATGTAAAGTGATAAGGGA+TGG | - | chr4_4:75763576-75763595 | None:intergenic | 30.0% | |
| ATTAAGCCTGCTAATAGATT+TGG | + | chr4_4:75763595-75763614 | Msa0703730:intron | 30.0% | |
| TATGCTACAGTGAAAATTCA+TGG | - | chr4_4:75763777-75763796 | None:intergenic | 30.0% | |
| GTAAAAAGTTCAAGAATTCG+TGG | - | chr4_4:75763991-75764010 | None:intergenic | 30.0% | |
| GTAATTAAAGGCTCTTTCTT+AGG | - | chr4_4:75764130-75764149 | None:intergenic | 30.0% | |
| AGAAAGAGCCTTTAATTACT+TGG | + | chr4_4:75764131-75764150 | Msa0703730:CDS | 30.0% | |
| GAAAGAGCCTTTAATTACTT+GGG | + | chr4_4:75764132-75764151 | Msa0703730:CDS | 30.0% | |
| TTGTGTACCCAAGTAATTAA+AGG | - | chr4_4:75764142-75764161 | None:intergenic | 30.0% | |
| CAAAAAAAAATTGGCAAAGC+AGG | - | chr4_4:75764179-75764198 | None:intergenic | 30.0% | |
| ! | AACTGTTTTGCTCAATATCA+AGG | - | chr4_4:75764416-75764435 | None:intergenic | 30.0% |
| !! | TTTTCTACTTTTAACTGGAG+AGG | + | chr4_4:75764752-75764771 | Msa0703730:intron | 30.0% |
| !! | TTTCTACTTTTAACTGGAGA+GGG | + | chr4_4:75764753-75764772 | Msa0703730:intron | 30.0% |
| !! | CACTTCATTTGTTTTCTGAA+CGG | + | chr4_4:75764902-75764921 | Msa0703730:intron | 30.0% |
| !! | ACTTCATTTGTTTTCTGAAC+GGG | + | chr4_4:75764903-75764922 | Msa0703730:intron | 30.0% |
| TTTAAATACATGGAACAGCT+GGG | + | chr4_4:75765110-75765129 | Msa0703730:CDS | 30.0% | |
| CAAAAAATAACCAGTGGTTA+TGG | - | chr4_4:75765292-75765311 | None:intergenic | 30.0% | |
| !! | ATTTTGTTCTATGAGAGCAT+TGG | + | chr4_4:75765404-75765423 | Msa0703730:CDS | 30.0% |
| !!! | TTTTGTTCTATGAGAGCATT+GGG | + | chr4_4:75765405-75765424 | Msa0703730:CDS | 30.0% |
| AGAAACTAGATGGAAAAAAC+GGG | - | chr4_4:75765493-75765512 | None:intergenic | 30.0% | |
| GAGAAACTAGATGGAAAAAA+CGG | - | chr4_4:75765494-75765513 | None:intergenic | 30.0% | |
| TATACCATTATTCAACCTGT+TGG | + | chr4_4:75765529-75765548 | Msa0703730:intron | 30.0% | |
| ATACCATTATTCAACCTGTT+GGG | + | chr4_4:75765530-75765549 | Msa0703730:intron | 30.0% | |
| GTGTTGTGAAATGTATACTT+AGG | + | chr4_4:75765598-75765617 | Msa0703730:intron | 30.0% | |
| TTGTGAAATGTATACTTAGG+TGG | + | chr4_4:75765601-75765620 | Msa0703730:intron | 30.0% | |
| TAAGAGCAGTATATATATGG+TGG | + | chr4_4:75765682-75765701 | Msa0703730:intron | 30.0% | |
| CAACCATGAATACATATTGT+CGG | - | chr4_4:75765716-75765735 | None:intergenic | 30.0% | |
| TGACTTTATTACTCTTGTCA+AGG | - | chr4_4:75765924-75765943 | None:intergenic | 30.0% | |
| !! | TTTTCTCATATCTAGAGTTC+TGG | + | chr4_4:75766019-75766038 | Msa0703730:intron | 30.0% |
| GAAAATGAGCTAAAAGTTTC+AGG | + | chr4_4:75766141-75766160 | Msa0703730:three_prime_UTR | 30.0% | |
| GATGCTGAATTGTTACAAAA+AGG | - | chr4_4:75766306-75766325 | None:intergenic | 30.0% | |
| TTGTAACAATTCAGCATCAT+AGG | + | chr4_4:75766308-75766327 | Msa0703730:three_prime_UTR | 30.0% | |
| AAGGAAATGTTGGAGGAAAT+TGG | - | chr4_4:75760219-75760238 | None:intergenic | 35.0% | |
| GTAAATGCAGAAGGAAATGT+TGG | - | chr4_4:75760229-75760248 | None:intergenic | 35.0% | |
| ! | GGTTTTCTGTGATATTATCG+CGG | - | chr4_4:75760308-75760327 | None:intergenic | 35.0% |
| ATGAGTCGTAGAAAGTTTCT+GGG | - | chr4_4:75760329-75760348 | None:intergenic | 35.0% | |
| AATGAGTCGTAGAAAGTTTC+TGG | - | chr4_4:75760330-75760349 | None:intergenic | 35.0% | |
| ! | TTAGAATCGCTGAGTTGAAT+CGG | + | chr4_4:75760368-75760387 | Msa0703730:five_prime_UTR | 35.0% |
| ! | CGATTTAGAATGAATCGGAT+TGG | - | chr4_4:75760592-75760611 | None:intergenic | 35.0% |
| ATAATAGGGTTGCCATATAG+TGG | + | chr4_4:75760973-75760992 | Msa0703730:intron | 35.0% | |
| GAATCATAATTAGGCCTGTT+TGG | - | chr4_4:75761174-75761193 | None:intergenic | 35.0% | |
| ATTGTCTTCACTAATTTCGG+CGG | + | chr4_4:75761511-75761530 | Msa0703730:intron | 35.0% | |
| CTTCTTCCTCTTCTTTCATT+TGG | + | chr4_4:75761592-75761611 | Msa0703730:intron | 35.0% | |
| TGAAGACCAAATGAAAGAAG+AGG | - | chr4_4:75761601-75761620 | None:intergenic | 35.0% | |
| CACTATGATTATCTAGCATC+TGG | + | chr4_4:75761865-75761884 | Msa0703730:intron | 35.0% | |
| AACCTCTGTACAAATCGTTT+GGG | - | chr4_4:75762135-75762154 | None:intergenic | 35.0% | |
| CTTGCATCTTTGCATAATCA+TGG | - | chr4_4:75762369-75762388 | None:intergenic | 35.0% | |
| GATTATGCAAAGATGCAAGT+AGG | + | chr4_4:75762370-75762389 | Msa0703730:intron | 35.0% | |
| CTATATTGGATGTTTCCAGA+TGG | + | chr4_4:75762475-75762494 | Msa0703730:intron | 35.0% | |
| !! | ATTTCGGTTGGTAGATCATT+AGG | + | chr4_4:75762523-75762542 | Msa0703730:intron | 35.0% |
| AAAGCTTGTAACAATTCCGA+GGG | - | chr4_4:75762610-75762629 | None:intergenic | 35.0% | |
| AAAAGCTTGTAACAATTCCG+AGG | - | chr4_4:75762611-75762630 | None:intergenic | 35.0% | |
| GTCTCACATTTGATGTGATA+TGG | + | chr4_4:75762689-75762708 | Msa0703730:intron | 35.0% | |
| CCTACAAAACTAAGCTTGTA+AGG | - | chr4_4:75762753-75762772 | None:intergenic | 35.0% | |
| !!! | CCTTACAAGCTTAGTTTTGT+AGG | + | chr4_4:75762750-75762769 | Msa0703730:intron | 35.0% |
| CACCAATCCAAAATTTGAGA+TGG | + | chr4_4:75762782-75762801 | Msa0703730:intron | 35.0% | |
| ! | CACCATCTCAAATTTTGGAT+TGG | - | chr4_4:75762787-75762806 | None:intergenic | 35.0% |
| ! | TCTGACACCATCTCAAATTT+TGG | - | chr4_4:75762792-75762811 | None:intergenic | 35.0% |
| TTTCAGCTTCAACATGTGTT+GGG | - | chr4_4:75762873-75762892 | None:intergenic | 35.0% | |
| AAGTTCTACCTGCAAAACAA+AGG | + | chr4_4:75763145-75763164 | Msa0703730:intron | 35.0% | |
| TCATTGGACAGCACAATATA+TGG | + | chr4_4:75763201-75763220 | Msa0703730:intron | 35.0% | |
| ATATATGGAAATCCACCACT+TGG | + | chr4_4:75763216-75763235 | Msa0703730:intron | 35.0% | |
| !! | ACCTGAAGGGTATTTATAAG+TGG | + | chr4_4:75763361-75763380 | Msa0703730:intron | 35.0% |
| !! | CCTGAAGGGTATTTATAAGT+GGG | + | chr4_4:75763362-75763381 | Msa0703730:intron | 35.0% |
| !! | AAATTTGTGTTGACTCTGGT+GGG | - | chr4_4:75763389-75763408 | None:intergenic | 35.0% |
| !! | TAAATTTGTGTTGACTCTGG+TGG | - | chr4_4:75763390-75763409 | None:intergenic | 35.0% |
| ACATTCTTCACCTTACAAGT+TGG | + | chr4_4:75763439-75763458 | Msa0703730:intron | 35.0% | |
| CCATACAAAACCAACTTGTA+AGG | - | chr4_4:75763452-75763471 | None:intergenic | 35.0% | |
| !!! | CCTTACAAGTTGGTTTTGTA+TGG | + | chr4_4:75763449-75763468 | Msa0703730:intron | 35.0% |
| !!! | TGGTTTTGTATGGTTGAGTT+AGG | + | chr4_4:75763459-75763478 | Msa0703730:intron | 35.0% |
| GGAAAAGATTATGATTCCAC+CGG | - | chr4_4:75763537-75763556 | None:intergenic | 35.0% | |
| GCATATCACTGTTATACTGA+TGG | + | chr4_4:75763620-75763639 | Msa0703730:intron | 35.0% | |
| CTTCAGAAAAGGTTGCAAAT+GGG | + | chr4_4:75764080-75764099 | Msa0703730:CDS | 35.0% | |
| TTCAAGAATGGTCATGCTAA+TGG | + | chr4_4:75764103-75764122 | Msa0703730:CDS | 35.0% | |
| TTGGGTACACAAAAACTTTC+AGG | + | chr4_4:75764150-75764169 | Msa0703730:CDS | 35.0% | |
| TGTTGTTGCAACAAATTTGG+AGG | + | chr4_4:75764210-75764229 | Msa0703730:intron | 35.0% | |
| ATGCTACTGCTTGTTTAACA+TGG | + | chr4_4:75764626-75764645 | Msa0703730:intron | 35.0% | |
| ATGGCGTAAAAAACCTTTAC+AGG | - | chr4_4:75764730-75764749 | None:intergenic | 35.0% | |
| ! | ACAAATGAAGTGCCAATCAA+TGG | - | chr4_4:75764894-75764913 | None:intergenic | 35.0% |
| TAAATGGGCATGAAAAACAG+AGG | - | chr4_4:75764979-75764998 | None:intergenic | 35.0% | |
| TGGTCACTAGATTGGTAAAT+GGG | - | chr4_4:75764994-75765013 | None:intergenic | 35.0% | |
| TTGGTCACTAGATTGGTAAA+TGG | - | chr4_4:75764995-75765014 | None:intergenic | 35.0% | |
| ATTTACCAATCTAGTGACCA+AGG | + | chr4_4:75764994-75765013 | Msa0703730:intron | 35.0% | |
| TCTCAAGCGGTTTAAATACA+TGG | + | chr4_4:75765100-75765119 | Msa0703730:CDS | 35.0% | |
| GTTTAAATACATGGAACAGC+TGG | + | chr4_4:75765109-75765128 | Msa0703730:CDS | 35.0% | |
| CGTCATCAAAAAATAACCAG+TGG | - | chr4_4:75765298-75765317 | None:intergenic | 35.0% | |
| GTGTTAGTTGAATATTCCTG+TGG | - | chr4_4:75765371-75765390 | None:intergenic | 35.0% | |
| CATAGAACAAAATGTACCCA+TGG | - | chr4_4:75765397-75765416 | None:intergenic | 35.0% | |
| TGCTTCCTTTATAGCAATAC+AGG | + | chr4_4:75765573-75765592 | Msa0703730:intron | 35.0% | |
| CACAACCTGTATTGCTATAA+AGG | - | chr4_4:75765581-75765600 | None:intergenic | 35.0% | |
| GAAATGTATACTTAGGTGGT+TGG | + | chr4_4:75765605-75765624 | Msa0703730:intron | 35.0% | |
| TGAGAAAGGAGAGAAGAAAA+AGG | - | chr4_4:75765659-75765678 | None:intergenic | 35.0% | |
| TACTGCTCTTATTGTGAGAA+AGG | - | chr4_4:75765673-75765692 | None:intergenic | 35.0% | |
| TTGCCGACAATATGTATTCA+TGG | + | chr4_4:75765710-75765729 | Msa0703730:intron | 35.0% | |
| !! | GGATCAACTGACTTGTATTA+AGG | + | chr4_4:75765844-75765863 | Msa0703730:intron | 35.0% |
| ! | TTGTCAAGGCATAGCATTTT+AGG | - | chr4_4:75765910-75765929 | None:intergenic | 35.0% |
| !! | TGTTCTTTGAAGCATTGGAA+AGG | + | chr4_4:75766056-75766075 | Msa0703730:intron | 35.0% |
| GTTTAACTCAGGAGCAAAAT+CGG | + | chr4_4:75766104-75766123 | Msa0703730:intron | 35.0% | |
| AATGCAGAAGGAAATGTTGG+AGG | - | chr4_4:75760226-75760245 | None:intergenic | 40.0% | |
| ATCGCGGAAGAATGAAATGA+GGG | - | chr4_4:75760292-75760311 | None:intergenic | 40.0% | |
| TATCGCGGAAGAATGAAATG+AGG | - | chr4_4:75760293-75760312 | None:intergenic | 40.0% | |
| CAAAGTAACGTTCTCCTTCA+GGG | - | chr4_4:75760490-75760509 | None:intergenic | 40.0% | |
| AAGTCCTTGTGAGACTGTTT+GGG | + | chr4_4:75760803-75760822 | Msa0703730:intron | 40.0% | |
| ! | TTTTCCCAAACAGTCTCACA+AGG | - | chr4_4:75760810-75760829 | None:intergenic | 40.0% |
| !! | CTCATTTTTCTACCTTCTGC+AGG | + | chr4_4:75761268-75761287 | Msa0703730:intron | 40.0% |
| ! | AAAAGTATAGTGCCTGCAGA+AGG | - | chr4_4:75761283-75761302 | None:intergenic | 40.0% |
| ! | GAACAACTGCTGGAGTATTA+TGG | + | chr4_4:75761317-75761336 | Msa0703730:CDS | 40.0% |
| TAACAAAACCTTAGGGGATG+CGG | + | chr4_4:75761343-75761362 | Msa0703730:CDS | 40.0% | |
| !!! | CTTAGCTGACTTGTTTTCAC+AGG | + | chr4_4:75761385-75761404 | Msa0703730:CDS | 40.0% |
| AGAAGAGGAAGAAGAATGCA+AGG | - | chr4_4:75761586-75761605 | None:intergenic | 40.0% | |
| TTTATCTGAATGCCTCACAG+TGG | + | chr4_4:75761634-75761653 | Msa0703730:intron | 40.0% | |
| GTGTTGAAGGAGAATTTGTC+AGG | + | chr4_4:75761758-75761777 | Msa0703730:intron | 40.0% | |
| AGTTCGCAGAAGAAGAAAAC+CGG | + | chr4_4:75762099-75762118 | Msa0703730:CDS | 40.0% | |
| CAACCTCTGTACAAATCGTT+TGG | - | chr4_4:75762136-75762155 | None:intergenic | 40.0% | |
| CTTTCGTAGCTATATGCATC+AGG | + | chr4_4:75762173-75762192 | Msa0703730:CDS | 40.0% | |
| AAAGCTGAAAGTTCGAAGCA+AGG | - | chr4_4:75762421-75762440 | None:intergenic | 40.0% | |
| GAGCCTGACAACAAGTATTT+CGG | + | chr4_4:75762507-75762526 | Msa0703730:intron | 40.0% | |
| !! | CAACCGAAATACTTGTTGTC+AGG | - | chr4_4:75762513-75762532 | None:intergenic | 40.0% |
| CTGACAACAAGTATTTCGGT+TGG | + | chr4_4:75762511-75762530 | Msa0703730:intron | 40.0% | |
| AAAACCGCATGCCTTGAATT+TGG | - | chr4_4:75762585-75762604 | None:intergenic | 40.0% | |
| TTGAATCCACTCAGGTCAAT+TGG | + | chr4_4:75762842-75762861 | Msa0703730:intron | 40.0% | |
| CTTTCAGCTTCAACATGTGT+TGG | - | chr4_4:75762874-75762893 | None:intergenic | 40.0% | |
| AAAATTACTACCCGCAGGAT+TGG | - | chr4_4:75763062-75763081 | None:intergenic | 40.0% | |
| ! | ATCCTGCGGGTAGTAATTTT+TGG | + | chr4_4:75763062-75763081 | Msa0703730:intron | 40.0% |
| ! | TCCTGCGGGTAGTAATTTTT+GGG | + | chr4_4:75763063-75763082 | Msa0703730:intron | 40.0% |
| ACGGTCTAGATGTTCATTCA+TGG | + | chr4_4:75763279-75763298 | Msa0703730:intron | 40.0% | |
| CGGTCTAGATGTTCATTCAT+GGG | + | chr4_4:75763280-75763299 | Msa0703730:intron | 40.0% | |
| CCCACTTATAAATACCCTTC+AGG | - | chr4_4:75763365-75763384 | None:intergenic | 40.0% | |
| ATGCAGCCAAATCTATTAGC+AGG | - | chr4_4:75763604-75763623 | None:intergenic | 40.0% | |
| ! | TACTGTCGGTCTTCTCTTTT+CGG | + | chr4_4:75763957-75763976 | Msa0703730:intron | 40.0% |
| GAATGAACTTGTCGACATTC+TGG | + | chr4_4:75764012-75764031 | Msa0703730:CDS | 40.0% | |
| ! | CCATTTGCAACCTTTTCTGA+AGG | - | chr4_4:75764082-75764101 | None:intergenic | 40.0% |
| CCTTCAGAAAAGGTTGCAAA+TGG | + | chr4_4:75764079-75764098 | Msa0703730:CDS | 40.0% | |
| ! | GTTGCAAATGGGTTCAAGAA+TGG | + | chr4_4:75764091-75764110 | Msa0703730:CDS | 40.0% |
| GAATACTCACCAATGAGACA+AGG | + | chr4_4:75764337-75764356 | Msa0703730:CDS | 40.0% | |
| AATGTGAAACTGTGACAGCT+AGG | + | chr4_4:75764367-75764386 | Msa0703730:CDS | 40.0% | |
| ATGTGAAACTGTGACAGCTA+GGG | + | chr4_4:75764368-75764387 | Msa0703730:CDS | 40.0% | |
| ! | CTGTTACTTGGTTTCTCGAT+TGG | + | chr4_4:75764545-75764564 | Msa0703730:intron | 40.0% |
| TACTTGGTTTCTCGATTGGT+TGG | + | chr4_4:75764549-75764568 | Msa0703730:intron | 40.0% | |
| ! | ACTTGGTTTCTCGATTGGTT+GGG | + | chr4_4:75764550-75764569 | Msa0703730:intron | 40.0% |
| !! | ACCATTTTGAGTCATGTGCT+TGG | + | chr4_4:75764596-75764615 | Msa0703730:intron | 40.0% |
| ! | GTTTTCTGAACGGGATTTCT+TGG | + | chr4_4:75764912-75764931 | Msa0703730:intron | 40.0% |
| CCAAAAGAAAGTTTGCACCT+TGG | - | chr4_4:75765014-75765033 | None:intergenic | 40.0% | |
| ! | CCAAGGTGCAAACTTTCTTT+TGG | + | chr4_4:75765011-75765030 | Msa0703730:intron | 40.0% |
| AAAGAAACCTCCTCACATTC+TGG | + | chr4_4:75765070-75765089 | Msa0703730:CDS | 40.0% | |
| AGATGAATGACCAGAATGTG+AGG | - | chr4_4:75765083-75765102 | None:intergenic | 40.0% | |
| TTCTGGTCATTCATCTCAAG+CGG | + | chr4_4:75765087-75765106 | Msa0703730:CDS | 40.0% | |
| GGTAAGACAACTTCTTGTAG+CGG | - | chr4_4:75765136-75765155 | None:intergenic | 40.0% | |
| ATTACTCAGCTTCAGCTCAA+GGG | - | chr4_4:75765171-75765190 | None:intergenic | 40.0% | |
| TATTACTCAGCTTCAGCTCA+AGG | - | chr4_4:75765172-75765191 | None:intergenic | 40.0% | |
| TTTGCGGTAGTTGTTCATGT+TGG | + | chr4_4:75765224-75765243 | Msa0703730:CDS | 40.0% | |
| ! | AGTGGTTATGGCTTTTCACA+AGG | - | chr4_4:75765280-75765299 | None:intergenic | 40.0% |
| TTGTGAAAAGCCATAACCAC+TGG | + | chr4_4:75765279-75765298 | Msa0703730:CDS | 40.0% | |
| TGATCCAAAGAACGTTTGCA+CGG | - | chr4_4:75765348-75765367 | None:intergenic | 40.0% | |
| TATTCAACTAACACCGACCA+TGG | + | chr4_4:75765377-75765396 | Msa0703730:CDS | 40.0% | |
| ATTCAACTAACACCGACCAT+GGG | + | chr4_4:75765378-75765397 | Msa0703730:CDS | 40.0% | |
| GAACAAAATGTACCCATGGT+CGG | - | chr4_4:75765393-75765412 | None:intergenic | 40.0% | |
| TCCATCTAGTTACTGTTACC+GGG | - | chr4_4:75765431-75765450 | None:intergenic | 40.0% | |
| CTCCATCTAGTTACTGTTAC+CGG | - | chr4_4:75765432-75765451 | None:intergenic | 40.0% | |
| CATTATTCAACCTGTTGGGA+GGG | + | chr4_4:75765534-75765553 | Msa0703730:intron | 40.0% | |
| !! | TGAGGTGTTCTTTGAAGCAT+TGG | + | chr4_4:75766051-75766070 | Msa0703730:intron | 40.0% |
| !! | AGCAAAATCGGCTTGTATCA+TGG | + | chr4_4:75766116-75766135 | Msa0703730:three_prime_UTR | 40.0% |
| ACATCTTGCTCTTGATTGCT+TGG | - | chr4_4:75766194-75766213 | None:intergenic | 40.0% | |
| AAGCAATCAAGAGCAAGATG+TGG | + | chr4_4:75766193-75766212 | Msa0703730:three_prime_UTR | 40.0% | |
| GCGCAAGTTGTAAATGCAGA+AGG | - | chr4_4:75760238-75760257 | None:intergenic | 45.0% | |
| ! | ATCGCTGAGTTGAATCGGTT+AGG | + | chr4_4:75760373-75760392 | Msa0703730:five_prime_UTR | 45.0% |
| AACGTTCTCCTTCAGGGAAT+TGG | - | chr4_4:75760484-75760503 | None:intergenic | 45.0% | |
| CCAAAGTAACGTTCTCCTTC+AGG | - | chr4_4:75760491-75760510 | None:intergenic | 45.0% | |
| CCTGAAGGAGAACGTTACTT+TGG | + | chr4_4:75760488-75760507 | Msa0703730:CDS | 45.0% | |
| CAAGTCCTTGTGAGACTGTT+TGG | + | chr4_4:75760802-75760821 | Msa0703730:intron | 45.0% | |
| TTGCCATATAGTGGCCATAG+CGG | + | chr4_4:75760982-75761001 | Msa0703730:intron | 45.0% | |
| ! | ATAGTGTTACAGTGCCGCTA+TGG | - | chr4_4:75760999-75761018 | None:intergenic | 45.0% |
| ! | ATTTTCTTCCGCATCCCCTA+AGG | - | chr4_4:75761354-75761373 | None:intergenic | 45.0% |
| AGGAAGAAGAATGCAAGGCT+GGG | - | chr4_4:75761581-75761600 | None:intergenic | 45.0% | |
| GGATAGCAAAAACCACTGTG+AGG | - | chr4_4:75761649-75761668 | None:intergenic | 45.0% | |
| CTCCCAAACGATTTGTACAG+AGG | + | chr4_4:75762130-75762149 | Msa0703730:CDS | 45.0% | |
| ATGGGTTTGTATGCAGCGTT+TGG | + | chr4_4:75762326-75762345 | Msa0703730:intron | 45.0% | |
| AGGCTCACAACATTACCATC+TGG | - | chr4_4:75762493-75762512 | None:intergenic | 45.0% | |
| !! | GTCAGGTTGGACCAAATTCA+AGG | + | chr4_4:75762571-75762590 | Msa0703730:intron | 45.0% |
| TGGACCAAATTCAAGGCATG+CGG | + | chr4_4:75762578-75762597 | Msa0703730:intron | 45.0% | |
| ATTCAAAACAGGTGGCTCGA+CGG | - | chr4_4:75762828-75762847 | None:intergenic | 45.0% | |
| ! | CTGAGTGGATTCAAAACAGG+TGG | - | chr4_4:75762836-75762855 | None:intergenic | 45.0% |
| !! | CACCTGTTTTGAATCCACTC+AGG | + | chr4_4:75762834-75762853 | Msa0703730:intron | 45.0% |
| ! | GACCTGAGTGGATTCAAAAC+AGG | - | chr4_4:75762839-75762858 | None:intergenic | 45.0% |
| !!! | GTGGTTTGCCTTTGTTTTGC+AGG | - | chr4_4:75763156-75763175 | None:intergenic | 45.0% |
| CACTTGGACTAAGTATGCCT+CGG | + | chr4_4:75763232-75763251 | Msa0703730:intron | 45.0% | |
| ! | ACATCTAGACCGTAACTTGC+AGG | - | chr4_4:75763272-75763291 | None:intergenic | 45.0% |
| GATGGTTGTGAGTTGTGACA+TGG | - | chr4_4:75763558-75763577 | None:intergenic | 45.0% | |
| ! | TGTCGACATTCTGGAGAAAG+AGG | + | chr4_4:75764021-75764040 | Msa0703730:CDS | 45.0% |
| GACACCAACACCTTCAGAAA+AGG | + | chr4_4:75764069-75764088 | Msa0703730:CDS | 45.0% | |
| !! | GCAACCTTTTCTGAAGGTGT+TGG | - | chr4_4:75764076-75764095 | None:intergenic | 45.0% |
| TGTTGCAAGTTGTTGTGACC+AGG | + | chr4_4:75764314-75764333 | Msa0703730:intron | 45.0% | |
| GTTGCAAGTTGTTGTGACCA+GGG | + | chr4_4:75764315-75764334 | Msa0703730:intron | 45.0% | |
| TCTCATTGGTGAGTATTCCC+TGG | - | chr4_4:75764335-75764354 | None:intergenic | 45.0% | |
| TTGCAAGCACCTTGTCTCAT+TGG | - | chr4_4:75764349-75764368 | None:intergenic | 45.0% | |
| TTCCACTGAGACGTTGAATG+CGG | + | chr4_4:75764464-75764483 | Msa0703730:CDS | 45.0% | |
| !! | TTTTCTGTGACAAGTGCTGC+AGG | + | chr4_4:75764496-75764515 | Msa0703730:CDS | 45.0% |
| TTGTGGCATCAGCTGTTACT+TGG | + | chr4_4:75764533-75764552 | Msa0703730:intron | 45.0% | |
| GCCAAGCACATGACTCAAAA+TGG | - | chr4_4:75764600-75764619 | None:intergenic | 45.0% | |
| TTGCACCTTGGTCACTAGAT+TGG | - | chr4_4:75765002-75765021 | None:intergenic | 45.0% | |
| TGAATGACCAGAATGTGAGG+AGG | - | chr4_4:75765080-75765099 | None:intergenic | 45.0% | |
| GCTCAAGGGGAAAAACAACT+CGG | - | chr4_4:75765157-75765176 | None:intergenic | 45.0% | |
| TTACTCAGCTTCAGCTCAAG+GGG | - | chr4_4:75765170-75765189 | None:intergenic | 45.0% | |
| GTAGTTGTTCATGTTGGCAG+TGG | + | chr4_4:75765230-75765249 | Msa0703730:CDS | 45.0% | |
| CTGACATAATGCCCATGGTT+GGG | - | chr4_4:75765257-75765276 | None:intergenic | 45.0% | |
| AACGTTCTTTGGATCACCAC+AGG | + | chr4_4:75765352-75765371 | Msa0703730:CDS | 45.0% | |
| CGGTAACAGTAACTAGATGG+AGG | + | chr4_4:75765430-75765449 | Msa0703730:exon | 45.0% | |
| ! | CCTCCCAACAGGTTGAATAA+TGG | - | chr4_4:75765536-75765555 | None:intergenic | 45.0% |
| CCATTATTCAACCTGTTGGG+AGG | + | chr4_4:75765533-75765552 | Msa0703730:intron | 45.0% | |
| !! | GAGTTCTGGATGTCAGATTG+AGG | + | chr4_4:75766033-75766052 | Msa0703730:intron | 45.0% |
| GCTCTTGATTGCTTGGATGT+TGG | - | chr4_4:75766187-75766206 | None:intergenic | 45.0% | |
| CAATCAAGAGCAAGATGTGG+AGG | + | chr4_4:75766196-75766215 | Msa0703730:three_prime_UTR | 45.0% | |
| !!! | TATAATTATTTTTAGATAAT+AGG | + | chr4_4:75760958-75760977 | Msa0703730:intron | 5.0% |
| !!! | ATAATTATTTTTAGATAATA+GGG | + | chr4_4:75760959-75760978 | Msa0703730:intron | 5.0% |
| ! | ACATTGACGCACGTGCTGAT+GGG | + | chr4_4:75760422-75760441 | Msa0703730:exon | 50.0% |
| !! | TGCTGGTTCCAAGCTTGAGA+AGG | + | chr4_4:75760448-75760467 | Msa0703730:CDS | 50.0% |
| !! | TCCAAGCTTGAGAAGGCACT+CGG | + | chr4_4:75760455-75760474 | Msa0703730:CDS | 50.0% |
| TCCATTTCGGGAACAACTGC+TGG | + | chr4_4:75761307-75761326 | Msa0703730:CDS | 50.0% | |
| TCCAGCAGTTGTTCCCGAAA+TGG | - | chr4_4:75761311-75761330 | None:intergenic | 50.0% | |
| GGCGGCTATGATTCATGCTT+TGG | + | chr4_4:75761529-75761548 | Msa0703730:intron | 50.0% | |
| AGAATGCAAGGCTGGGAAGT+CGG | - | chr4_4:75761574-75761593 | None:intergenic | 50.0% | |
| GAGGAAGAAGAATGCAAGGC+TGG | - | chr4_4:75761582-75761601 | None:intergenic | 50.0% | |
| TCGTTTGGGAGCAATGACAC+CGG | - | chr4_4:75762121-75762140 | None:intergenic | 50.0% | |
| GCTGATCCAATTGACCTGAG+TGG | - | chr4_4:75762851-75762870 | None:intergenic | 50.0% | |
| !! | TGCAAAGGGTACCAATCCTG+CGG | + | chr4_4:75763048-75763067 | Msa0703730:intron | 50.0% |
| GCCCAAAAATTACTACCCGC+AGG | - | chr4_4:75763067-75763086 | None:intergenic | 50.0% | |
| GGCATACTTAGTCCAAGTGG+TGG | - | chr4_4:75763231-75763250 | None:intergenic | 50.0% | |
| CGAGGCATACTTAGTCCAAG+TGG | - | chr4_4:75763234-75763253 | None:intergenic | 50.0% | |
| TTGGACTAAGTATGCCTCGG+TGG | + | chr4_4:75763235-75763254 | Msa0703730:intron | 50.0% | |
| TAAGTATGCCTCGGTGGCTT+GGG | + | chr4_4:75763241-75763260 | Msa0703730:intron | 50.0% | |
| TGGGCTGATCCTGCAAGTTA+CGG | + | chr4_4:75763260-75763279 | Msa0703730:intron | 50.0% | |
| GATGTTCATTCATGGGCGTG+AGG | + | chr4_4:75763287-75763306 | Msa0703730:intron | 50.0% | |
| ! | GTCGGTCTTCTCTTTTCGGT+AGG | + | chr4_4:75763961-75763980 | Msa0703730:intron | 50.0% |
| ! | CATTCTGGAGAAAGAGGCTC+AGG | + | chr4_4:75764027-75764046 | Msa0703730:CDS | 50.0% |
| !! | TCTGAAGGTGTTGGTGTCTC+TGG | - | chr4_4:75764067-75764086 | None:intergenic | 50.0% |
| GCTGACATAATGCCCATGGT+TGG | - | chr4_4:75765258-75765277 | None:intergenic | 50.0% | |
| CAAGGCTGACATAATGCCCA+TGG | - | chr4_4:75765262-75765281 | None:intergenic | 50.0% | |
| TCCAAAGAACGTTTGCACGG+CGG | - | chr4_4:75765345-75765364 | None:intergenic | 50.0% | |
| !! | TTCTATGAGAGCATTGGGCC+CGG | + | chr4_4:75765410-75765429 | Msa0703730:CDS | 50.0% |
| GCCCGGTAACAGTAACTAGA+TGG | + | chr4_4:75765427-75765446 | Msa0703730:exon | 50.0% | |
| ! | AGGTGTGCTGCACGACTTTT+AGG | + | chr4_4:75765450-75765469 | Msa0703730:three_prime_UTR | 50.0% |
| TAGGTGGTTGGCATGTACAG+TGG | + | chr4_4:75765617-75765636 | Msa0703730:intron | 50.0% | |
| TGGTTGGCATGTACAGTGGA+TGG | + | chr4_4:75765621-75765640 | Msa0703730:intron | 50.0% | |
| TTGGCATGTACAGTGGATGG+TGG | + | chr4_4:75765624-75765643 | Msa0703730:intron | 50.0% | |
| ! | CAAGATGTGGAGGTGCACTA+AGG | + | chr4_4:75766206-75766225 | Msa0703730:three_prime_UTR | 50.0% |
| GACATTGACGCACGTGCTGA+TGG | + | chr4_4:75760421-75760440 | Msa0703730:exon | 55.0% | |
| ACCGAGTGCCTTCTCAAGCT+TGG | - | chr4_4:75760459-75760478 | None:intergenic | 55.0% | |
| CTCGGTGACCAATTCCCTGA+AGG | + | chr4_4:75760473-75760492 | Msa0703730:CDS | 55.0% | |
| ! | GTGCCGCTATGGCCACTATA+TGG | - | chr4_4:75760988-75761007 | None:intergenic | 55.0% |
| ! | AGGCATGCGGTTTTCACCCT+CGG | + | chr4_4:75762591-75762610 | Msa0703730:intron | 55.0% |
| TGGCTCGACGGATCTTAGAC+AGG | - | chr4_4:75762816-75762835 | None:intergenic | 55.0% | |
| !! | GCAAAGGGTACCAATCCTGC+GGG | + | chr4_4:75763049-75763068 | Msa0703730:intron | 55.0% |
| CTAAGTATGCCTCGGTGGCT+TGG | + | chr4_4:75763240-75763259 | Msa0703730:intron | 55.0% | |
| !! | TGAGGAGTGTGTGTTGGCTC+TGG | + | chr4_4:75763305-75763324 | Msa0703730:intron | 55.0% |
| CTCCGCATTCAACGTCTCAG+TGG | - | chr4_4:75764469-75764488 | None:intergenic | 55.0% | |
| CACTGAGACGTTGAATGCGG+AGG | + | chr4_4:75764467-75764486 | Msa0703730:CDS | 55.0% | |
| TTGGCAGTGGTCCCAACCAT+GGG | + | chr4_4:75765243-75765262 | Msa0703730:CDS | 55.0% | |
| TCCGCCGTGCAAACGTTCTT+TGG | + | chr4_4:75765341-75765360 | Msa0703730:CDS | 55.0% | |
| ACCTGTTGGGAGGGATTGTG+AGG | + | chr4_4:75765543-75765562 | Msa0703730:intron | 55.0% | |
| CCTGTTGGGAGGGATTGTGA+GGG | + | chr4_4:75765544-75765563 | Msa0703730:intron | 55.0% | |
| ! | TGGGCGTGAGGAGTGTGTGT+TGG | + | chr4_4:75763299-75763318 | Msa0703730:intron | 60.0% |
| GTTGGCAGTGGTCCCAACCA+TGG | + | chr4_4:75765242-75765261 | Msa0703730:CDS | 60.0% | |
| CCCTCACAATCCCTCCCAAC+AGG | - | chr4_4:75765547-75765566 | None:intergenic | 60.0% | |
| ! | CACGTGCTGATGGGTGCTGC+TGG | + | chr4_4:75760431-75760450 | Msa0703730:exon | 65.0% |
| AGGATCAGCCCAAGCCACCG+AGG | - | chr4_4:75763252-75763271 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 75760209 | 75766418 | 75760209 | ID=Msa0703730;Name=Msa0703730 |
| chr4_4 | mRNA | 75760209 | 75766418 | 75760209 | ID=Msa0703730-mRNA-1;Parent=Msa0703730;Name=Msa0703730-mRNA-1;_AED=0.16;_eAED=0.16;_QI=231|1|1|1|0.83|0.71|7|330|369 |
| chr4_4 | exon | 75760209 | 75760556 | 75760209 | ID=Msa0703730-mRNA-1:exon:23829;Parent=Msa0703730-mRNA-1 |
| chr4_4 | exon | 75761290 | 75761406 | 75761290 | ID=Msa0703730-mRNA-1:exon:23830;Parent=Msa0703730-mRNA-1 |
| chr4_4 | exon | 75762096 | 75762194 | 75762096 | ID=Msa0703730-mRNA-1:exon:23831;Parent=Msa0703730-mRNA-1 |
| chr4_4 | exon | 75763983 | 75764171 | 75763983 | ID=Msa0703730-mRNA-1:exon:23832;Parent=Msa0703730-mRNA-1 |
| chr4_4 | exon | 75764336 | 75764517 | 75764336 | ID=Msa0703730-mRNA-1:exon:23833;Parent=Msa0703730-mRNA-1 |
| chr4_4 | exon | 75765040 | 75765471 | 75765040 | ID=Msa0703730-mRNA-1:exon:23834;Parent=Msa0703730-mRNA-1 |
| chr4_4 | exon | 75766115 | 75766418 | 75766115 | ID=Msa0703730-mRNA-1:exon:23835;Parent=Msa0703730-mRNA-1 |
| chr4_4 | five_prime_UTR | 75760209 | 75760439 | 75760209 | ID=Msa0703730-mRNA-1:five_prime_utr;Parent=Msa0703730-mRNA-1 |
| chr4_4 | CDS | 75760440 | 75760556 | 75760440 | ID=Msa0703730-mRNA-1:cds;Parent=Msa0703730-mRNA-1 |
| chr4_4 | CDS | 75761290 | 75761406 | 75761290 | ID=Msa0703730-mRNA-1:cds;Parent=Msa0703730-mRNA-1 |
| chr4_4 | CDS | 75762096 | 75762194 | 75762096 | ID=Msa0703730-mRNA-1:cds;Parent=Msa0703730-mRNA-1 |
| chr4_4 | CDS | 75763983 | 75764171 | 75763983 | ID=Msa0703730-mRNA-1:cds;Parent=Msa0703730-mRNA-1 |
| chr4_4 | CDS | 75764336 | 75764517 | 75764336 | ID=Msa0703730-mRNA-1:cds;Parent=Msa0703730-mRNA-1 |
| chr4_4 | CDS | 75765040 | 75765445 | 75765040 | ID=Msa0703730-mRNA-1:cds;Parent=Msa0703730-mRNA-1 |
| chr4_4 | three_prime_UTR | 75765446 | 75765471 | 75765446 | ID=Msa0703730-mRNA-1:three_prime_utr;Parent=Msa0703730-mRNA-1 |
| chr4_4 | three_prime_UTR | 75766115 | 75766418 | 75766115 | ID=Msa0703730-mRNA-1:three_prime_utr;Parent=Msa0703730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
