Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557950 | XP_013457042.1 | 99.248 | 133 | 1 | 0 | 1 | 133 | 1 | 133 | 4.03e-90 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557950 | sp|O65426|LOL2_ARATH | 64.407 | 118 | 32 | 3 | 15 | 123 | 25 | 141 | 7.07e-45 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557950 | A0A072UPT8 | 99.248 | 133 | 1 | 0 | 1 | 133 | 1 | 133 | 1.92e-90 | 267 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0557950 | TF | C2C2-LSD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0557950 | 0.818768 | 1.649864e-52 | -8.615850e-47 |
| Msa0017320 | Msa0557950 | -0.823365 | 1.440930e-53 | -8.615850e-47 |
| Msa0027390 | Msa0557950 | -0.804102 | 2.538330e-49 | -8.615850e-47 |
| Msa0029850 | Msa0557950 | -0.801857 | 7.386641e-49 | -8.615850e-47 |
| Msa0038020 | Msa0557950 | -0.823481 | 1.353538e-53 | -8.615850e-47 |
| Msa0042550 | Msa0557950 | -0.818050 | 2.399787e-52 | -8.615850e-47 |
| Msa0043730 | Msa0557950 | -0.816292 | 5.962499e-52 | -8.615850e-47 |
| Msa0055070 | Msa0557950 | -0.828206 | 1.022466e-54 | -8.615850e-47 |
| Msa0064110 | Msa0557950 | -0.814451 | 1.530840e-51 | -8.615850e-47 |
| Msa0068430 | Msa0557950 | -0.803420 | 3.515746e-49 | -8.615850e-47 |
| Msa0076700 | Msa0557950 | -0.807891 | 4.049659e-50 | -8.615850e-47 |
| Msa0084430 | Msa0557950 | -0.825728 | 4.002105e-54 | -8.615850e-47 |
| Msa0085720 | Msa0557950 | -0.874057 | 9.090265e-68 | -8.615850e-47 |
| Msa0090030 | Msa0557950 | -0.824676 | 7.094337e-54 | -8.615850e-47 |
| Msa0090390 | Msa0557950 | -0.801100 | 1.055799e-48 | -8.615850e-47 |
| Msa0092170 | Msa0557950 | -0.814817 | 1.270098e-51 | -8.615850e-47 |
| Msa0092440 | Msa0557950 | -0.844943 | 5.526052e-59 | -8.615850e-47 |
| Msa0096580 | Msa0557950 | -0.803789 | 2.947598e-49 | -8.615850e-47 |
| Msa0101020 | Msa0557950 | -0.830056 | 3.639589e-55 | -8.615850e-47 |
| Msa0124550 | Msa0557950 | -0.868383 | 6.801817e-66 | -8.615850e-47 |
| Msa0126230 | Msa0557950 | -0.804191 | 2.432159e-49 | -8.615850e-47 |
| Msa0126910 | Msa0557950 | -0.831686 | 1.450463e-55 | -8.615850e-47 |
| Msa0130520 | Msa0557950 | -0.826206 | 3.080272e-54 | -8.615850e-47 |
| Msa0138210 | Msa0557950 | -0.804774 | 1.838071e-49 | -8.615850e-47 |
| Msa0140400 | Msa0557950 | -0.805080 | 1.586288e-49 | -8.615850e-47 |
| Msa0140510 | Msa0557950 | 0.843530 | 1.324017e-58 | -8.615850e-47 |
| Msa0140520 | Msa0557950 | 0.802556 | 5.304049e-49 | -8.615850e-47 |
| Msa0145110 | Msa0557950 | -0.824900 | 6.281326e-54 | -8.615850e-47 |
| Msa0163560 | Msa0557950 | -0.802507 | 5.428534e-49 | -8.615850e-47 |
| Msa0165300 | Msa0557950 | -0.808982 | 2.369781e-50 | -8.615850e-47 |
| Msa0169820 | Msa0557950 | -0.810835 | 9.461727e-51 | -8.615850e-47 |
| Msa0171980 | Msa0557950 | -0.800983 | 1.115588e-48 | -8.615850e-47 |
| Msa0172000 | Msa0557950 | -0.811540 | 6.651600e-51 | -8.615850e-47 |
| Msa0175050 | Msa0557950 | -0.852626 | 4.081547e-61 | -8.615850e-47 |
| Msa0176330 | Msa0557950 | -0.802583 | 5.237857e-49 | -8.615850e-47 |
| Msa0178510 | Msa0557950 | -0.806168 | 9.375595e-50 | -8.615850e-47 |
| Msa0183010 | Msa0557950 | 0.826942 | 2.056698e-54 | -8.615850e-47 |
| Msa0188050 | Msa0557950 | -0.816481 | 5.408740e-52 | -8.615850e-47 |
| Msa0193540 | Msa0557950 | -0.842089 | 3.198579e-58 | -8.615850e-47 |
| Msa0194720 | Msa0557950 | -0.823833 | 1.119214e-53 | -8.615850e-47 |
| Msa0199800 | Msa0557950 | 0.825502 | 4.526125e-54 | -8.615850e-47 |
| Msa0202930 | Msa0557950 | -0.804632 | 1.968215e-49 | -8.615850e-47 |
| Msa0230640 | Msa0557950 | 0.803274 | 3.769457e-49 | -8.615850e-47 |
| Msa0235470 | Msa0557950 | -0.817716 | 2.854446e-52 | -8.615850e-47 |
| Msa0365490 | Msa0557950 | -0.811496 | 6.800480e-51 | -8.615850e-47 |
| Msa0377440 | Msa0557950 | -0.816536 | 5.257071e-52 | -8.615850e-47 |
| Msa0377530 | Msa0557950 | -0.804159 | 2.468844e-49 | -8.615850e-47 |
| Msa0381000 | Msa0557950 | -0.815661 | 8.246567e-52 | -8.615850e-47 |
| Msa0387050 | Msa0557950 | -0.800953 | 1.131357e-48 | -8.615850e-47 |
| Msa0388030 | Msa0557950 | 0.862009 | 6.863660e-64 | -8.615850e-47 |
| Msa0389810 | Msa0557950 | -0.809315 | 2.010869e-50 | -8.615850e-47 |
| Msa0390960 | Msa0557950 | -0.812827 | 3.485051e-51 | -8.615850e-47 |
| Msa0404700 | Msa0557950 | -0.817073 | 3.983118e-52 | -8.615850e-47 |
| Msa0417650 | Msa0557950 | -0.831875 | 1.302312e-55 | -8.615850e-47 |
| Msa0417730 | Msa0557950 | -0.816522 | 5.294765e-52 | -8.615850e-47 |
| Msa0422180 | Msa0557950 | -0.813207 | 2.876174e-51 | -8.615850e-47 |
| Msa0423270 | Msa0557950 | -0.803268 | 3.780790e-49 | -8.615850e-47 |
| Msa0430870 | Msa0557950 | -0.832161 | 1.106976e-55 | -8.615850e-47 |
| Msa0430950 | Msa0557950 | -0.809848 | 1.544686e-50 | -8.615850e-47 |
| Msa0436190 | Msa0557950 | -0.822079 | 2.869642e-53 | -8.615850e-47 |
| Msa0462540 | Msa0557950 | -0.806139 | 9.509431e-50 | -8.615850e-47 |
| Msa0464900 | Msa0557950 | -0.815385 | 9.498837e-52 | -8.615850e-47 |
| Msa0468130 | Msa0557950 | -0.813217 | 2.861714e-51 | -8.615850e-47 |
| Msa0482180 | Msa0557950 | -0.800397 | 1.468854e-48 | -8.615850e-47 |
| Msa0239690 | Msa0557950 | -0.819668 | 1.028967e-52 | -8.615850e-47 |
| Msa0241740 | Msa0557950 | -0.812628 | 3.852683e-51 | -8.615850e-47 |
| Msa0252550 | Msa0557950 | -0.803541 | 3.318496e-49 | -8.615850e-47 |
| Msa0262370 | Msa0557950 | -0.811580 | 6.520141e-51 | -8.615850e-47 |
| Msa0265150 | Msa0557950 | -0.801207 | 1.003838e-48 | -8.615850e-47 |
| Msa0266210 | Msa0557950 | -0.831130 | 1.987780e-55 | -8.615850e-47 |
| Msa0266240 | Msa0557950 | -0.841287 | 5.206223e-58 | -8.615850e-47 |
| Msa0269520 | Msa0557950 | -0.849892 | 2.415701e-60 | -8.615850e-47 |
| Msa0271580 | Msa0557950 | -0.818339 | 2.063657e-52 | -8.615850e-47 |
| Msa0274630 | Msa0557950 | -0.838205 | 3.301929e-57 | -8.615850e-47 |
| Msa0279210 | Msa0557950 | 0.816199 | 6.255555e-52 | -8.615850e-47 |
| Msa0281480 | Msa0557950 | -0.821985 | 3.017562e-53 | -8.615850e-47 |
| Msa0287670 | Msa0557950 | -0.834560 | 2.792917e-56 | -8.615850e-47 |
| Msa0299580 | Msa0557950 | -0.806773 | 6.991161e-50 | -8.615850e-47 |
| Msa0300150 | Msa0557950 | -0.812199 | 4.781741e-51 | -8.615850e-47 |
| Msa0304840 | Msa0557950 | -0.834378 | 3.103654e-56 | -8.615850e-47 |
| Msa0312310 | Msa0557950 | -0.808817 | 2.570434e-50 | -8.615850e-47 |
| Msa0314060 | Msa0557950 | -0.838548 | 2.694237e-57 | -8.615850e-47 |
| Msa0320610 | Msa0557950 | -0.818753 | 1.662952e-52 | -8.615850e-47 |
| Msa0341230 | Msa0557950 | -0.825315 | 5.013603e-54 | -8.615850e-47 |
| Msa0347990 | Msa0557950 | -0.800091 | 1.695336e-48 | -8.615850e-47 |
| Msa0349700 | Msa0557950 | -0.813533 | 2.438772e-51 | -8.615850e-47 |
| Msa0354660 | Msa0557950 | 0.812207 | 4.760609e-51 | -8.615850e-47 |
| Msa0363170 | Msa0557950 | -0.815822 | 7.591334e-52 | -8.615850e-47 |
| Msa0505060 | Msa0557950 | -0.814118 | 1.813432e-51 | -8.615850e-47 |
| Msa0514610 | Msa0557950 | -0.806297 | 8.809416e-50 | -8.615850e-47 |
| Msa0517490 | Msa0557950 | -0.807803 | 4.227753e-50 | -8.615850e-47 |
| Msa0524600 | Msa0557950 | -0.813090 | 3.051521e-51 | -8.615850e-47 |
| Msa0527980 | Msa0557950 | 0.804280 | 2.329826e-49 | -8.615850e-47 |
| Msa0530650 | Msa0557950 | -0.837758 | 4.302978e-57 | -8.615850e-47 |
| Msa0534410 | Msa0557950 | -0.809723 | 1.643003e-50 | -8.615850e-47 |
| Msa0537770 | Msa0557950 | -0.837025 | 6.630775e-57 | -8.615850e-47 |
| Msa0554380 | Msa0557950 | 0.809670 | 1.687395e-50 | -8.615850e-47 |
| Msa0557950 | Msa0573040 | -0.833072 | 6.580405e-56 | -8.615850e-47 |
| Msa0557950 | Msa0587030 | -0.802225 | 6.206419e-49 | -8.615850e-47 |
| Msa0557950 | Msa0587190 | -0.851726 | 7.353793e-61 | -8.615850e-47 |
| Msa0557950 | Msa0612680 | 0.930583 | 1.326646e-93 | -8.615850e-47 |
| Msa0557950 | Msa0615220 | -0.800654 | 1.302199e-48 | -8.615850e-47 |
| Msa0557950 | Msa0621240 | -0.805797 | 1.122395e-49 | -8.615850e-47 |
| Msa0557950 | Msa0621650 | -0.802316 | 5.945304e-49 | -8.615850e-47 |
| Msa0557950 | Msa0626850 | -0.806813 | 6.854588e-50 | -8.615850e-47 |
| Msa0557950 | Msa0626990 | -0.843649 | 1.230702e-58 | -8.615850e-47 |
| Msa0557950 | Msa0627350 | -0.839525 | 1.504397e-57 | -8.615850e-47 |
| Msa0557950 | Msa0628290 | -0.805803 | 1.118843e-49 | -8.615850e-47 |
| Msa0557950 | Msa0641730 | -0.803110 | 4.075497e-49 | -8.615850e-47 |
| Msa0557950 | Msa0653320 | 0.994302 | 3.714885e-206 | -8.615850e-47 |
| Msa0557950 | Msa0675990 | -0.807428 | 5.080514e-50 | -8.615850e-47 |
| Msa0557950 | Msa0679550 | -0.850583 | 1.545731e-60 | -8.615850e-47 |
| Msa0557950 | Msa0698440 | -0.806560 | 7.752508e-50 | -8.615850e-47 |
| Msa0557950 | Msa0703730 | -0.807350 | 5.277332e-50 | -8.615850e-47 |
| Msa0557950 | Msa0713350 | -0.804758 | 1.852599e-49 | -8.615850e-47 |
| Msa0557950 | Msa0721340 | -0.813918 | 2.007062e-51 | -8.615850e-47 |
| Msa0557950 | Msa0724950 | -0.834070 | 3.706157e-56 | -8.615850e-47 |
| Msa0557950 | Msa0741160 | -0.820595 | 6.311518e-53 | -8.615850e-47 |
| Msa0557950 | Msa0747720 | 0.800134 | 1.661685e-48 | -8.615850e-47 |
| Msa0557950 | Msa0749440 | -0.809257 | 2.069625e-50 | -8.615850e-47 |
| Msa0557950 | Msa0754920 | -0.800068 | 1.714434e-48 | -8.615850e-47 |
| Msa0557950 | Msa0760350 | -0.800470 | 1.419622e-48 | -8.615850e-47 |
| Msa0557950 | Msa0760990 | 0.805287 | 1.435982e-49 | -8.615850e-47 |
| Msa0557950 | Msa0761890 | -0.812765 | 3.596599e-51 | -8.615850e-47 |
| Msa0557950 | Msa0763080 | -0.817014 | 4.108432e-52 | -8.615850e-47 |
| Msa0557950 | Msa0780280 | -0.821418 | 4.081085e-53 | -8.615850e-47 |
| Msa0557950 | Msa0790170 | 0.817351 | 3.449665e-52 | -8.615850e-47 |
| Msa0557950 | Msa0799060 | -0.821607 | 3.690344e-53 | -8.615850e-47 |
| Msa0557950 | Msa0801730 | -0.807399 | 5.150567e-50 | -8.615850e-47 |
| Msa0557950 | Msa0803590 | -0.830736 | 2.482317e-55 | -8.615850e-47 |
| Msa0557950 | Msa0805420 | -0.808593 | 2.870381e-50 | -8.615850e-47 |
| Msa0557950 | Msa0820530 | 0.817934 | 2.548483e-52 | -8.615850e-47 |
| Msa0557950 | Msa0821800 | -0.822603 | 2.168621e-53 | -8.615850e-47 |
| Msa0557950 | Msa0831150 | -0.812312 | 4.516967e-51 | -8.615850e-47 |
| Msa0557950 | Msa0831850 | -0.802909 | 4.485602e-49 | -8.615850e-47 |
| Msa0557950 | Msa0844110 | -0.803671 | 3.119209e-49 | -8.615850e-47 |
| Msa0557950 | Msa0845070 | -0.840992 | 6.223586e-58 | -8.615850e-47 |
| Msa0557950 | Msa0861830 | -0.840180 | 1.015558e-57 | -8.615850e-47 |
| Msa0557950 | Msa0866400 | -0.813033 | 3.141201e-51 | -8.615850e-47 |
| Msa0557950 | Msa0876860 | 0.807851 | 4.130370e-50 | -8.615850e-47 |
| Msa0557950 | Msa0930820 | -0.828175 | 1.040487e-54 | -8.615850e-47 |
| Msa0557950 | Msa0944730 | -0.814253 | 1.692909e-51 | -8.615850e-47 |
| Msa0557950 | Msa0945100 | -0.803769 | 2.976671e-49 | -8.615850e-47 |
| Msa0557950 | Msa0945120 | -0.806317 | 8.721684e-50 | -8.615850e-47 |
| Msa0557950 | Msa0959010 | -0.812695 | 3.725282e-51 | -8.615850e-47 |
| Msa0557950 | Msa0965020 | -0.810610 | 1.058112e-50 | -8.615850e-47 |
| Msa0557950 | Msa0981310 | -0.814207 | 1.732398e-51 | -8.615850e-47 |
| Msa0557950 | Msa0982270 | -0.804029 | 2.627594e-49 | -8.615850e-47 |
| Msa0557950 | Msa0982320 | 0.804294 | 2.314399e-49 | -8.615850e-47 |
| Msa0557950 | Msa1008750 | -0.818155 | 2.272258e-52 | -8.615850e-47 |
| Msa0557950 | Msa1021510 | -0.811832 | 5.747266e-51 | -8.615850e-47 |
| Msa0557950 | Msa1029080 | 0.821395 | 4.130554e-53 | -8.615850e-47 |
| Msa0557950 | Msa1032170 | -0.803083 | 4.128888e-49 | -8.615850e-47 |
| Msa0557950 | Msa1038210 | 0.807025 | 6.183537e-50 | -8.615850e-47 |
| Msa0557950 | Msa1048700 | -0.815182 | 1.053885e-51 | -8.615850e-47 |
| Msa0557950 | Msa1048750 | 0.810113 | 1.354603e-50 | -8.615850e-47 |
| Msa0557950 | Msa1070840 | -0.816996 | 4.146070e-52 | -8.615850e-47 |
| Msa0557950 | Msa1072530 | 0.835267 | 1.853696e-56 | -8.615850e-47 |
| Msa0557950 | Msa1077070 | -0.803699 | 3.078180e-49 | -8.615850e-47 |
| Msa0557950 | Msa1077340 | -0.810593 | 1.067245e-50 | -8.615850e-47 |
| Msa0557950 | Msa1096060 | -0.804599 | 1.999425e-49 | -8.615850e-47 |
| Msa0557950 | Msa1096550 | -0.823716 | 1.192214e-53 | -8.615850e-47 |
| Msa0557950 | Msa1105500 | -0.801501 | 8.741197e-49 | -8.615850e-47 |
| Msa0557950 | Msa1109820 | -0.835259 | 1.861857e-56 | -8.615850e-47 |
| Msa0557950 | Msa1115280 | -0.809089 | 2.248365e-50 | -8.615850e-47 |
| Msa0557950 | Msa1118760 | -0.823870 | 1.097367e-53 | -8.615850e-47 |
| Msa0557950 | Msa1121110 | -0.806108 | 9.654520e-50 | -8.615850e-47 |
| Msa0557950 | Msa1122780 | -0.816019 | 6.862770e-52 | -8.615850e-47 |
| Msa0557950 | Msa1128330 | -0.803492 | 3.397335e-49 | -8.615850e-47 |
| Msa0557950 | Msa1130530 | -0.820337 | 7.234029e-53 | -8.615850e-47 |
| Msa0557950 | Msa1133570 | -0.847756 | 9.457218e-60 | -8.615850e-47 |
| Msa0557950 | Msa1135880 | -0.802409 | 5.687746e-49 | -8.615850e-47 |
| Msa0557950 | Msa1143020 | -0.812871 | 3.408427e-51 | -8.615850e-47 |
| Msa0557950 | Msa1144970 | -0.820700 | 5.971991e-53 | -8.615850e-47 |
| Msa0557950 | Msa1156170 | 0.819619 | 1.055882e-52 | -8.615850e-47 |
| Msa0557950 | Msa1158660 | -0.821755 | 3.410189e-53 | -8.615850e-47 |
| Msa0557950 | Msa1163590 | 0.808778 | 2.620320e-50 | -8.615850e-47 |
| Msa0557950 | Msa1164020 | -0.807326 | 5.339335e-50 | -8.615850e-47 |
| Msa0557950 | Msa1172130 | 0.814718 | 1.336080e-51 | -8.615850e-47 |
| Msa0557950 | Msa1174310 | -0.876020 | 1.945031e-68 | -8.615850e-47 |
| Msa0557950 | Msa1176270 | -0.803889 | 2.809672e-49 | -8.615850e-47 |
| Msa0557950 | Msa1177780 | -0.822090 | 2.852333e-53 | -8.615850e-47 |
| Msa0557950 | Msa1182640 | -0.817855 | 2.655839e-52 | -8.615850e-47 |
| Msa0557950 | Msa1188600 | 0.804395 | 2.205200e-49 | -8.615850e-47 |
| Msa0557950 | Msa1224580 | 0.812419 | 4.280226e-51 | -8.615850e-47 |
| Msa0557950 | Msa1229850 | -0.836670 | 8.168083e-57 | -8.615850e-47 |
| Msa0557950 | Msa1235400 | -0.851127 | 1.086368e-60 | -8.615850e-47 |
| Msa0557950 | Msa1241800 | -0.801812 | 7.546456e-49 | -8.615850e-47 |
| Msa0557950 | Msa1258370 | -0.817516 | 3.166793e-52 | -8.615850e-47 |
| Msa0557950 | Msa1263290 | 0.820361 | 7.143205e-53 | -8.615850e-47 |
| Msa0557950 | Msa1270660 | -0.833639 | 4.750049e-56 | -8.615850e-47 |
| Msa0557950 | Msa1270730 | -0.814228 | 1.713984e-51 | -8.615850e-47 |
| Msa0557950 | Msa1272520 | -0.801484 | 8.810564e-49 | -8.615850e-47 |
| Msa0557950 | Msa1276510 | -0.824277 | 8.807747e-54 | -8.615850e-47 |
| Msa0557950 | Msa1280620 | -0.801565 | 8.481161e-49 | -8.615850e-47 |
| Msa0557950 | Msa1286550 | -0.805952 | 1.041323e-49 | -8.615850e-47 |
| Msa0557950 | Msa1296300 | -0.807532 | 4.826811e-50 | -8.615850e-47 |
| Msa0557950 | Msa1307550 | -0.827608 | 1.424320e-54 | -8.615850e-47 |
| Msa0557950 | Msa1307740 | -0.817497 | 3.198421e-52 | -8.615850e-47 |
| Msa0557950 | Msa1314770 | -0.866387 | 2.960073e-65 | -8.615850e-47 |
| Msa0557950 | Msa1335710 | -0.810779 | 9.726599e-51 | -8.615850e-47 |
| Msa0557950 | Msa1336040 | -0.800201 | 1.610540e-48 | -8.615850e-47 |
| Msa0557950 | Msa1338250 | -0.810910 | 9.113798e-51 | -8.615850e-47 |
| Msa0557950 | Msa1339190 | -0.814248 | 1.697214e-51 | -8.615850e-47 |
| Msa0557950 | Msa1340040 | 0.800894 | 1.163515e-48 | -8.615850e-47 |
| Msa0557950 | Msa1340810 | -0.812018 | 5.234309e-51 | -8.615850e-47 |
| Msa0557950 | Msa1340830 | -0.810719 | 1.002391e-50 | -8.615850e-47 |
| Msa0557950 | Msa1341490 | -0.807394 | 5.164971e-50 | -8.615850e-47 |
| Msa0557950 | Msa1350690 | -0.836308 | 1.009503e-56 | -8.615850e-47 |
| Msa0557950 | Msa1359320 | -0.802725 | 4.895490e-49 | -8.615850e-47 |
| Msa0557950 | Msa1360240 | -0.819129 | 1.365463e-52 | -8.615850e-47 |
| Msa0557950 | Msa1360280 | -0.817919 | 2.568345e-52 | -8.615850e-47 |
| Msa0557950 | Msa1363700 | -0.822359 | 2.471506e-53 | -8.615850e-47 |
| Msa0557950 | Msa1371090 | -0.805345 | 1.396406e-49 | -8.615850e-47 |
| Msa0557950 | Msa1371940 | -0.811367 | 7.252623e-51 | -8.615850e-47 |
| Msa0557950 | Msa1372150 | -0.800396 | 1.469587e-48 | -8.615850e-47 |
| Msa0557950 | Msa1373350 | -0.813972 | 1.952631e-51 | -8.615850e-47 |
| Msa0557950 | Msa1376160 | 0.811182 | 7.955480e-51 | -8.615850e-47 |
| Msa0557950 | Msa1396940 | -0.805766 | 1.139031e-49 | -8.615850e-47 |
| Msa0557950 | Msa1400070 | -0.834233 | 3.374487e-56 | -8.615850e-47 |
| Msa0557950 | Msa1404240 | 0.808925 | 2.436899e-50 | -8.615850e-47 |
| Msa0557950 | Msa1407650 | -0.815230 | 1.028274e-51 | -8.615850e-47 |
| Msa0557950 | Msa1417810 | 0.843591 | 1.275664e-58 | -8.615850e-47 |
| Msa0557950 | Msa1422840 | -0.855363 | 6.636284e-62 | -8.615850e-47 |
| Msa0557950 | Msa1426570 | -0.816710 | 4.806124e-52 | -8.615850e-47 |
| Msa0557950 | Msa1432630 | -0.800136 | 1.660627e-48 | -8.615850e-47 |
| Msa0557950 | Msa1433220 | -0.818896 | 1.542647e-52 | -8.615850e-47 |
| Msa0557950 | Msa1435400 | -0.800401 | 1.466254e-48 | -8.615850e-47 |
| Msa0557950 | Msa1445220 | -0.836681 | 8.113925e-57 | -8.615850e-47 |
| Msa0557950 | Msa1445400 | 0.841714 | 4.018933e-58 | -8.615850e-47 |
| Msa0557950 | Msa1449350 | 0.849142 | 3.908673e-60 | -8.615850e-47 |
| Msa0557950 | Msa1458030 | -0.813171 | 2.929756e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557950 | MtrunA17_Chr4g0047341 | 97.368 | 114 | 3 | 0 | 1 | 114 | 1 | 114 | 3.51e-79 | 230 |
| Msa0557950 | MtrunA17_Chr4g0054701 | 56.098 | 82 | 34 | 1 | 32 | 113 | 64 | 143 | 6.54e-27 | 97.8 |
| Msa0557950 | MtrunA17_Chr2g0303181 | 43.434 | 99 | 54 | 1 | 31 | 127 | 33 | 131 | 2.13e-25 | 94.7 |
| Msa0557950 | MtrunA17_Chr8g0381011 | 48.864 | 88 | 43 | 1 | 32 | 119 | 35 | 120 | 9.01e-25 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0557950 | AT4G21610.1 | 64.407 | 118 | 32 | 3 | 15 | 123 | 25 | 141 | 7.18e-46 | 146 |
| Msa0557950 | AT4G21610.2 | 62.617 | 107 | 30 | 3 | 15 | 112 | 25 | 130 | 1.49e-37 | 125 |
| Msa0557950 | AT1G32540.3 | 54.878 | 82 | 35 | 1 | 32 | 113 | 65 | 144 | 1.64e-26 | 97.4 |
| Msa0557950 | AT1G32540.2 | 54.878 | 82 | 35 | 1 | 32 | 113 | 65 | 144 | 1.64e-26 | 97.4 |
| Msa0557950 | AT1G32540.1 | 54.878 | 82 | 35 | 1 | 32 | 113 | 98 | 177 | 1.72e-26 | 98.2 |
| Msa0557950 | AT1G32540.5 | 57.143 | 77 | 31 | 1 | 32 | 108 | 65 | 139 | 8.60e-25 | 93.2 |
| Msa0557950 | AT4G20380.2 | 44.944 | 89 | 40 | 1 | 40 | 119 | 48 | 136 | 3.03e-22 | 87.4 |
| Msa0557950 | AT4G20380.7 | 44.944 | 89 | 40 | 1 | 40 | 119 | 48 | 136 | 3.03e-22 | 87.4 |
| Msa0557950 | AT4G20380.6 | 44.944 | 89 | 40 | 1 | 40 | 119 | 43 | 131 | 3.22e-22 | 87.0 |
| Msa0557950 | AT4G20380.3 | 44.944 | 89 | 40 | 1 | 40 | 119 | 43 | 131 | 3.22e-22 | 87.0 |
| Msa0557950 | AT4G20380.4 | 44.944 | 89 | 40 | 1 | 40 | 119 | 43 | 131 | 3.22e-22 | 87.0 |
| Msa0557950 | AT4G20380.1 | 44.944 | 89 | 40 | 1 | 40 | 119 | 43 | 131 | 3.22e-22 | 87.0 |
| Msa0557950 | AT4G20380.5 | 44.944 | 89 | 40 | 1 | 40 | 119 | 43 | 131 | 3.22e-22 | 87.0 |
| Msa0557950 | AT4G20380.9 | 45.122 | 82 | 36 | 1 | 40 | 112 | 43 | 124 | 5.36e-20 | 79.7 |
| Msa0557950 | AT4G20380.9 | 44.776 | 67 | 34 | 1 | 42 | 105 | 4 | 70 | 1.25e-13 | 63.5 |
| Msa0557950 | AT4G20380.8 | 35.652 | 115 | 39 | 1 | 40 | 119 | 43 | 157 | 5.77e-19 | 79.3 |
| Msa0557950 | AT4G20380.8 | 44.776 | 67 | 34 | 1 | 42 | 105 | 4 | 70 | 1.16e-13 | 65.1 |
| Msa0557950 | AT1G32540.4 | 44.872 | 78 | 42 | 1 | 31 | 107 | 23 | 100 | 1.26e-12 | 60.5 |
| Msa0557950 | AT1G32540.6 | 44.872 | 78 | 42 | 1 | 31 | 107 | 23 | 100 | 1.26e-12 | 60.5 |
| Msa0557950 | AT1G32540.7 | 45.833 | 72 | 38 | 1 | 37 | 107 | 62 | 133 | 3.63e-11 | 57.4 |
Find 79 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCCATTGTCCTATTAAC+TGG | 0.181792 | 4_1:+56498848 | Msa0557950:three_prime_UTR |
| CGTCGTCTTCTTTGTTTACT+TGG | 0.250828 | 4_1:-56495657 | None:intergenic |
| GGCCGTGGGCGTTGCGGTGG+GGG | 0.301669 | 4_1:-56495709 | None:intergenic |
| TGGCCGTGGGCGTTGCGGTG+GGG | 0.306898 | 4_1:-56495710 | None:intergenic |
| TGCCGGTTTGTGACAGAAAT+CGG | 0.319178 | 4_1:+56498289 | Msa0557950:CDS |
| TAGAGAAAAGTAAGTGATTA+TGG | 0.320345 | 4_1:+56499100 | Msa0557950:three_prime_UTR |
| AGGCCGCTAACAACCAGATT+TGG | 0.328376 | 4_1:-56498827 | None:intergenic |
| GGTGGCCGTGGGCGTTGCGG+TGG | 0.333387 | 4_1:-56495712 | None:intergenic |
| AGTGACGGTGGCGGTGGCCG+TGG | 0.335089 | 4_1:-56495724 | None:intergenic |
| ACAAGGATGACCCAGTTAAT+AGG | 0.337289 | 4_1:-56498859 | None:intergenic |
| GCATGAACATTTGACATGTT+TGG | 0.343047 | 4_1:-56496053 | None:intergenic |
| GTGGCCGTGGGCGTTGCGGT+GGG | 0.370495 | 4_1:-56495711 | None:intergenic |
| TTCCTTCGTCACAGCTGATC+AGG | 0.397948 | 4_1:+56498189 | Msa0557950:intron |
| AACTTGTCAATGTCAAGTTT+TGG | 0.403600 | 4_1:+56498951 | Msa0557950:three_prime_UTR |
| CTTCTTTGTTTACTTGGTGT+TGG | 0.410923 | 4_1:-56495651 | None:intergenic |
| CATTCATAATTTGTCATACA+AGG | 0.412323 | 4_1:-56498876 | None:intergenic |
| GGCCGCTAACAACCAGATTT+GGG | 0.413926 | 4_1:-56498826 | None:intergenic |
| TCTTAAATTTGCAATATGTA+TGG | 0.415707 | 4_1:+56498927 | Msa0557950:three_prime_UTR |
| AAACCAACTCCTCCCAAATC+TGG | 0.417656 | 4_1:+56498814 | Msa0557950:CDS |
| GCCGGTTTGTGACAGAAATC+GGG | 0.420532 | 4_1:+56498290 | Msa0557950:CDS |
| CAAGGGACAATGAAAAGAAA+AGG | 0.428643 | 4_1:-56499020 | None:intergenic |
| TTGTATGACAAATTATGAAT+GGG | 0.429313 | 4_1:+56498878 | Msa0557950:three_prime_UTR |
| CTAATACAATGTTGACTGTC+TGG | 0.430906 | 4_1:-56496078 | None:intergenic |
| TGATTATGGTGAAATTCAAT+TGG | 0.435796 | 4_1:+56499114 | Msa0557950:three_prime_UTR |
| CATACGGTGCTCCACAAGTT+AGG | 0.437213 | 4_1:+56498257 | Msa0557950:CDS |
| CAACCAGATTTGGGAGGAGT+TGG | 0.440236 | 4_1:-56498817 | None:intergenic |
| CTTGTATGACAAATTATGAA+TGG | 0.446097 | 4_1:+56498877 | Msa0557950:three_prime_UTR |
| GTGACGGTGGCGGTGGCCGT+GGG | 0.451108 | 4_1:-56495723 | None:intergenic |
| CCCCGATTTCTGTCACAAAC+CGG | 0.464843 | 4_1:-56498291 | None:intergenic |
| GATGGGAGTGACGGTGGCGG+TGG | 0.475419 | 4_1:-56495730 | None:intergenic |
| ATAGGTTGCCAACCAGGTGG+CGG | 0.493264 | 4_1:-56495685 | None:intergenic |
| TGTAGTGTGTGAAGAAGTAA+CGG | 0.499517 | 4_1:+56495599 | Msa0557950:five_prime_UTR |
| GGCGGTGGCCGTGGGCGTTG+CGG | 0.501640 | 4_1:-56495715 | None:intergenic |
| ATACTATATGACAATATTCA+AGG | 0.505127 | 4_1:-56499038 | None:intergenic |
| ACAGTCAACATTGTATTAGA+AGG | 0.509196 | 4_1:+56496082 | Msa0557950:CDS |
| TAGGTTGCCAACCAGGTGGC+GGG | 0.511813 | 4_1:-56495684 | None:intergenic |
| CATTTGACATGTTTGGCACC+TGG | 0.517148 | 4_1:-56496046 | None:intergenic |
| CTAGAGTACAGGCGAATGGT+TGG | 0.520955 | 4_1:-56499176 | None:intergenic |
| CGCCTGCTTTCGTATCCACC+AGG | 0.522323 | 4_1:+56496028 | Msa0557950:CDS |
| AAGGGACAATGAAAAGAAAA+GGG | 0.522925 | 4_1:-56499019 | None:intergenic |
| AAGTTAGGTGTTCATCATGC+CGG | 0.527912 | 4_1:+56498272 | Msa0557950:CDS |
| CTAACTTGTGGAGCACCGTA+TGG | 0.535574 | 4_1:-56498256 | None:intergenic |
| CAGACAACAAGCGGCCTCCA+TGG | 0.537061 | 4_1:+56498776 | Msa0557950:CDS |
| CACCTGGTGGATACGAAAGC+AGG | 0.543193 | 4_1:-56496030 | None:intergenic |
| CCGGATGGGAGTGACGGTGG+CGG | 0.550715 | 4_1:-56495733 | None:intergenic |
| TACTATATGACAATATTCAA+GGG | 0.551540 | 4_1:-56499037 | None:intergenic |
| ACGACGGCCCGCCACCTGGT+TGG | 0.559468 | 4_1:+56495677 | Msa0557950:CDS |
| CCGCCACCGTCACTCCCATC+CGG | 0.560200 | 4_1:+56495733 | Msa0557950:CDS |
| CTCCCAAATCTGGTTGTTAG+CGG | 0.560296 | 4_1:+56498824 | Msa0557950:CDS |
| GACGACGACGGCCCGCCACC+TGG | 0.561082 | 4_1:+56495673 | Msa0557950:CDS |
| TGTCCATTGTCCTATTAACT+GGG | 0.565229 | 4_1:+56498849 | Msa0557950:three_prime_UTR |
| TTGTGCAGGCAGACAACAAG+CGG | 0.571247 | 4_1:+56498767 | Msa0557950:intron |
| GGGATCACGGGAGGAACAGA+AGG | 0.576535 | 4_1:-56498999 | None:intergenic |
| TAACTTGTGGAGCACCGTAT+GGG | 0.583052 | 4_1:-56498255 | None:intergenic |
| GTAGTGTGTGAAGAAGTAAC+GGG | 0.584958 | 4_1:+56495600 | Msa0557950:five_prime_UTR |
| ATGAAAAGAAAAGGGATCAC+GGG | 0.585104 | 4_1:-56499011 | None:intergenic |
| TTACTTTGTTGTACAGACCA+TGG | 0.588700 | 4_1:-56498793 | None:intergenic |
| AACTGACCGGATGGGAGTGA+CGG | 0.591272 | 4_1:-56495739 | None:intergenic |
| TTCGTCACAGCTGATCAGGT+TGG | 0.596338 | 4_1:+56498193 | Msa0557950:intron |
| CAGGTTGGACAAGTTAAGTG+TGG | 0.602861 | 4_1:+56498208 | Msa0557950:CDS |
| TGTATGACAAATTATGAATG+GGG | 0.603273 | 4_1:+56498879 | Msa0557950:three_prime_UTR |
| CATGATGAACACCTAACTTG+TGG | 0.604697 | 4_1:-56498268 | None:intergenic |
| AATGAAAAGAAAAGGGATCA+CGG | 0.605042 | 4_1:-56499012 | None:intergenic |
| TAAATAGCAACTGACCGGAT+GGG | 0.614535 | 4_1:-56495747 | None:intergenic |
| GAATCTAGAGTACAGGCGAA+TGG | 0.615992 | 4_1:-56499180 | None:intergenic |
| AGGTTGGACAAGTTAAGTGT+GGG | 0.628125 | 4_1:+56498209 | Msa0557950:CDS |
| TGACCGGATGGGAGTGACGG+TGG | 0.636305 | 4_1:-56495736 | None:intergenic |
| TTGACATGTTTGGCACCTGG+TGG | 0.642814 | 4_1:-56496043 | None:intergenic |
| CAGTTAATAGGACAATGGAC+AGG | 0.647351 | 4_1:-56498847 | None:intergenic |
| GGAATAGGTTGCCAACCAGG+TGG | 0.649831 | 4_1:-56495688 | None:intergenic |
| GTATTGCTAATGTACCCATA+CGG | 0.650598 | 4_1:+56498241 | Msa0557950:CDS |
| TTGGAAAAGACAATTAATCA+CGG | 0.653985 | 4_1:-56499157 | None:intergenic |
| CCGGTTTGTGACAGAAATCG+GGG | 0.660382 | 4_1:+56498291 | Msa0557950:CDS |
| AAAAGAAAAGGGATCACGGG+AGG | 0.670556 | 4_1:-56499008 | None:intergenic |
| CGCTAACAACCAGATTTGGG+AGG | 0.672253 | 4_1:-56498823 | None:intergenic |
| TGACCCAGTTAATAGGACAA+TGG | 0.679589 | 4_1:-56498852 | None:intergenic |
| CTGGTGGATACGAAAGCAGG+CGG | 0.684251 | 4_1:-56496027 | None:intergenic |
| GTAAACAAAGAAGACGACGA+CGG | 0.708854 | 4_1:+56495661 | Msa0557950:CDS |
| CTTTGTTGTACAGACCATGG+AGG | 0.723748 | 4_1:-56498790 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTGATTTTATATTGT+TGG | + | chr4_1:56498697-56498716 | Msa0557950:intron | 10.0% |
| !!! | TTTTGACTTAAAAAATTAGA+AGG | - | chr4_1:56498362-56498381 | None:intergenic | 15.0% |
| !!! | ATAATGACCAAATATTTTCT+TGG | + | chr4_1:56496975-56496994 | Msa0557950:intron | 20.0% |
| !! | TTCATATTTGAAAATTGTGT+CGG | - | chr4_1:56497134-56497153 | None:intergenic | 20.0% |
| !! | GAAAATTTCATTAACATAAC+AGG | - | chr4_1:56497632-56497651 | None:intergenic | 20.0% |
| !! | ATATTCAACATTGTATTAGA+AGG | + | chr4_1:56497698-56497717 | Msa0557950:intron | 20.0% |
| !! | TTCATAAACAATTACATGAT+TGG | + | chr4_1:56497820-56497839 | Msa0557950:intron | 20.0% |
| !! | AGTAACATTTCTAACAAAAA+AGG | + | chr4_1:56497921-56497940 | Msa0557950:intron | 20.0% |
| !! | ACATATTACATATTGTTCTA+AGG | + | chr4_1:56498416-56498435 | Msa0557950:intron | 20.0% |
| !! | TTGTATGACAAATTATGAAT+GGG | + | chr4_1:56498878-56498897 | Msa0557950:three_prime_UTR | 20.0% |
| !! | TCTTAAATTTGCAATATGTA+TGG | + | chr4_1:56498927-56498946 | Msa0557950:three_prime_UTR | 20.0% |
| !! | TACTATATGACAATATTCAA+GGG | - | chr4_1:56499040-56499059 | None:intergenic | 20.0% |
| !! | ATACTATATGACAATATTCA+AGG | - | chr4_1:56499041-56499060 | None:intergenic | 20.0% |
| ! | CTTCTTTCAAAAAACCATAA+GGG | - | chr4_1:56495571-56495590 | None:intergenic | 25.0% |
| ! | TCTTCTTTCAAAAAACCATA+AGG | - | chr4_1:56495572-56495591 | None:intergenic | 25.0% |
| ! | GAGAAAAAAAGAGAAGTAAT+AGG | - | chr4_1:56495790-56495809 | None:intergenic | 25.0% |
| ! | CCATAAAAGGTTAAAACTAA+AGG | - | chr4_1:56495919-56495938 | None:intergenic | 25.0% |
| !!! | CCTTTAGTTTTAACCTTTTA+TGG | + | chr4_1:56495916-56495935 | Msa0557950:intron | 25.0% |
| !!! | TCAAATGAATTGGTTTTTTG+TGG | + | chr4_1:56495940-56495959 | Msa0557950:intron | 25.0% |
| !!! | TTTCTAAAAGCTAATTTTCG+AGG | - | chr4_1:56496195-56496214 | None:intergenic | 25.0% |
| !! | ATGAAATTTTCAATGCTCTA+CGG | + | chr4_1:56496456-56496475 | Msa0557950:intron | 25.0% |
| ! | ATCAAAAGTTGAAGATTACA+TGG | + | chr4_1:56497206-56497225 | Msa0557950:intron | 25.0% |
| ! | TCAAAAGTTGAAGATTACAT+GGG | + | chr4_1:56497207-56497226 | Msa0557950:intron | 25.0% |
| ! | AACTTAAAATGCAAGTTTCA+TGG | - | chr4_1:56497768-56497787 | None:intergenic | 25.0% |
| ! | TCATCAAATTCAAATGTGAT+TGG | - | chr4_1:56497992-56498011 | None:intergenic | 25.0% |
| ! | TACTTGTACAAAATATGACA+TGG | + | chr4_1:56498125-56498144 | Msa0557950:intron | 25.0% |
| ! | TACATAAATCAACTTGCAAT+TGG | - | chr4_1:56498397-56498416 | None:intergenic | 25.0% |
| ! | CTTTAAATTATCCAAGTGTA+GGG | + | chr4_1:56498587-56498606 | Msa0557950:intron | 25.0% |
| ! | TTTAAATTATCCAAGTGTAG+GGG | + | chr4_1:56498588-56498607 | Msa0557950:intron | 25.0% |
| !! | CATTCATAATTTGTCATACA+AGG | - | chr4_1:56498879-56498898 | None:intergenic | 25.0% |
| ! | CTTGTATGACAAATTATGAA+TGG | + | chr4_1:56498877-56498896 | Msa0557950:three_prime_UTR | 25.0% |
| ! | TGTATGACAAATTATGAATG+GGG | + | chr4_1:56498879-56498898 | Msa0557950:three_prime_UTR | 25.0% |
| ! | TAGAGAAAAGTAAGTGATTA+TGG | + | chr4_1:56499100-56499119 | Msa0557950:three_prime_UTR | 25.0% |
| ! | TGATTATGGTGAAATTCAAT+TGG | + | chr4_1:56499114-56499133 | Msa0557950:three_prime_UTR | 25.0% |
| ! | TTGGAAAAGACAATTAATCA+CGG | - | chr4_1:56499160-56499179 | None:intergenic | 25.0% |
| ATGAATAAATAGCAACTGAC+CGG | - | chr4_1:56495755-56495774 | None:intergenic | 30.0% | |
| !! | AAGCTCGTAGCTTTAATATT+TGG | + | chr4_1:56495810-56495829 | Msa0557950:intron | 30.0% |
| !! | AGCTCGTAGCTTTAATATTT+GGG | + | chr4_1:56495811-56495830 | Msa0557950:intron | 30.0% |
| !! | GGTTCAATTATTTCTGAAAG+AGG | + | chr4_1:56495832-56495851 | Msa0557950:intron | 30.0% |
| CAATTCATTTGAGCCATAAA+AGG | - | chr4_1:56495932-56495951 | None:intergenic | 30.0% | |
| ! | CTTTTATGGCTCAAATGAAT+TGG | + | chr4_1:56495930-56495949 | Msa0557950:intron | 30.0% |
| ACAGTCAACATTGTATTAGA+AGG | + | chr4_1:56496082-56496101 | Msa0557950:CDS | 30.0% | |
| AGACATGTTCATGAGAAAAA+AGG | - | chr4_1:56496116-56496135 | None:intergenic | 30.0% | |
| TAGTTGATCTACGAAGATTT+GGG | - | chr4_1:56496363-56496382 | None:intergenic | 30.0% | |
| TGCGATTCAGTTCAATAAAT+CGG | - | chr4_1:56496436-56496455 | None:intergenic | 30.0% | |
| ! | TGAAATTTTCAATGCTCTAC+GGG | + | chr4_1:56496457-56496476 | Msa0557950:intron | 30.0% |
| CTCAAGTTTATATCTCACAT+TGG | + | chr4_1:56496579-56496598 | Msa0557950:intron | 30.0% | |
| TTTGTCCAAAGTACAAACAA+GGG | - | chr4_1:56496651-56496670 | None:intergenic | 30.0% | |
| ATTTGTCCAAAGTACAAACA+AGG | - | chr4_1:56496652-56496671 | None:intergenic | 30.0% | |
| AACAACTATTTCAACATCGA+TGG | + | chr4_1:56496827-56496846 | Msa0557950:intron | 30.0% | |
| TGCAGCTTCAATTTCATTAT+GGG | - | chr4_1:56497245-56497264 | None:intergenic | 30.0% | |
| TTGCAGCTTCAATTTCATTA+TGG | - | chr4_1:56497246-56497265 | None:intergenic | 30.0% | |
| ! | AAACTATCCTCTTTTGTCAA+TGG | - | chr4_1:56497460-56497479 | None:intergenic | 30.0% |
| AGCTAACATGTATAAGATCA+TGG | + | chr4_1:56497483-56497502 | Msa0557950:intron | 30.0% | |
| CAGGAAATTTGATTACAATC+AGG | - | chr4_1:56497613-56497632 | None:intergenic | 30.0% | |
| !!! | GAAACTTGCATTTTAAGTTC+AGG | + | chr4_1:56497769-56497788 | Msa0557950:intron | 30.0% |
| !! | AGTTCAGGTTTTTATACATC+TGG | + | chr4_1:56497784-56497803 | Msa0557950:intron | 30.0% |
| AACTTCCTGGTCATTATAAA+AGG | + | chr4_1:56497944-56497963 | Msa0557950:intron | 30.0% | |
| ACTTCCTGGTCATTATAAAA+GGG | + | chr4_1:56497945-56497964 | Msa0557950:intron | 30.0% | |
| ! | ATTCAAATGTGATTGGTCAT+TGG | - | chr4_1:56497985-56498004 | None:intergenic | 30.0% |
| TTGGAGAGGTTTATCATATT+TGG | - | chr4_1:56498030-56498049 | None:intergenic | 30.0% | |
| !!! | AGTCTAGTTTTCTCTTTGTA+CGG | + | chr4_1:56498524-56498543 | Msa0557950:intron | 30.0% |
| CCTACACTTGGATAATTTAA+AGG | - | chr4_1:56498589-56498608 | None:intergenic | 30.0% | |
| CCTTTAAATTATCCAAGTGT+AGG | + | chr4_1:56498586-56498605 | Msa0557950:intron | 30.0% | |
| TTAAATTATCCAAGTGTAGG+GGG | + | chr4_1:56498589-56498608 | Msa0557950:intron | 30.0% | |
| TCTTCAGATTGAATGAATAG+AGG | - | chr4_1:56498666-56498685 | None:intergenic | 30.0% | |
| TGAGGATATCAGTGTTTAAA+TGG | - | chr4_1:56498741-56498760 | None:intergenic | 30.0% | |
| ! | AACTTGTCAATGTCAAGTTT+TGG | + | chr4_1:56498951-56498970 | Msa0557950:three_prime_UTR | 30.0% |
| AATGAAAAGAAAAGGGATCA+CGG | - | chr4_1:56499015-56499034 | None:intergenic | 30.0% | |
| AAGGGACAATGAAAAGAAAA+GGG | - | chr4_1:56499022-56499041 | None:intergenic | 30.0% | |
| ! | TTTTCTCTATATGCGTATTC+AGG | - | chr4_1:56499089-56499108 | None:intergenic | 30.0% |
| !! | TGTTTTTACCTAGTCCCTTA+TGG | + | chr4_1:56495554-56495573 | Msa0557950:five_prime_UTR | 35.0% |
| TCAAAAAACCATAAGGGACT+AGG | - | chr4_1:56495565-56495584 | None:intergenic | 35.0% | |
| TGTAGTGTGTGAAGAAGTAA+CGG | + | chr4_1:56495599-56495618 | Msa0557950:five_prime_UTR | 35.0% | |
| !! | CTTCTTTGTTTACTTGGTGT+TGG | - | chr4_1:56495654-56495673 | None:intergenic | 35.0% |
| GAACAAAAGCTGTGGAAAAA+GGG | + | chr4_1:56495854-56495873 | Msa0557950:intron | 35.0% | |
| AACAAAAGCTGTGGAAAAAG+GGG | + | chr4_1:56495855-56495874 | Msa0557950:intron | 35.0% | |
| TTTGATACAGTTGTGTGAAC+AGG | + | chr4_1:56495974-56495993 | Msa0557950:intron | 35.0% | |
| GCATGAACATTTGACATGTT+TGG | - | chr4_1:56496056-56496075 | None:intergenic | 35.0% | |
| ! | CTAATACAATGTTGACTGTC+TGG | - | chr4_1:56496081-56496100 | None:intergenic | 35.0% |
| TTTATTTGAGAATCTCCAGC+CGG | + | chr4_1:56496167-56496186 | Msa0557950:intron | 35.0% | |
| !! | AAAGCTAATTTTCGAGGAAC+CGG | - | chr4_1:56496189-56496208 | None:intergenic | 35.0% |
| GTAGTTGATCTACGAAGATT+TGG | - | chr4_1:56496364-56496383 | None:intergenic | 35.0% | |
| CTACAACAGATGAACCATAT+CGG | + | chr4_1:56496380-56496399 | Msa0557950:intron | 35.0% | |
| TCAATAAATCGGGGATTGTT+GGG | - | chr4_1:56496425-56496444 | None:intergenic | 35.0% | |
| TTCAATAAATCGGGGATTGT+TGG | - | chr4_1:56496426-56496445 | None:intergenic | 35.0% | |
| CGATTCAGTTCAATAAATCG+GGG | - | chr4_1:56496434-56496453 | None:intergenic | 35.0% | |
| GCGATTCAGTTCAATAAATC+GGG | - | chr4_1:56496435-56496454 | None:intergenic | 35.0% | |
| AAAGAGTGGTTAAGTTCCAT+TGG | + | chr4_1:56496522-56496541 | Msa0557950:intron | 35.0% | |
| GTGAGATATAAACTTGAGAG+AGG | - | chr4_1:56496577-56496596 | None:intergenic | 35.0% | |
| TTGTCCAAAGTACAAACAAG+GGG | - | chr4_1:56496650-56496669 | None:intergenic | 35.0% | |
| GACAAATTTGCAGTTGAGAT+AGG | + | chr4_1:56496665-56496684 | Msa0557950:intron | 35.0% | |
| GCAAATGATTGGAATGAGAA+TGG | - | chr4_1:56496777-56496796 | None:intergenic | 35.0% | |
| TGAAATAGTTGTTACCGTCT+AGG | - | chr4_1:56496820-56496839 | None:intergenic | 35.0% | |
| CTGGGAACCAAGAAAATATT+TGG | - | chr4_1:56496985-56497004 | None:intergenic | 35.0% | |
| GGTTATAGTTCTCATCTTCT+GGG | - | chr4_1:56497003-56497022 | None:intergenic | 35.0% | |
| TGGTTATAGTTCTCATCTTC+TGG | - | chr4_1:56497004-56497023 | None:intergenic | 35.0% | |
| AGAAGATGAGAACTATAACC+AGG | + | chr4_1:56497003-56497022 | Msa0557950:intron | 35.0% | |
| ACAGGCTACTCCTAAAATTA+GGG | - | chr4_1:56497044-56497063 | None:intergenic | 35.0% | |
| TACAGGCTACTCCTAAAATT+AGG | - | chr4_1:56497045-56497064 | None:intergenic | 35.0% | |
| CATTGTTTGGATATTGCTGT+GGG | - | chr4_1:56497099-56497118 | None:intergenic | 35.0% | |
| ACATTGTTTGGATATTGCTG+TGG | - | chr4_1:56497100-56497119 | None:intergenic | 35.0% | |
| AACAACTCGTTGATCATAGT+TGG | - | chr4_1:56497182-56497201 | None:intergenic | 35.0% | |
| AACTATGATCAACGAGTTGT+TGG | + | chr4_1:56497181-56497200 | Msa0557950:intron | 35.0% | |
| AAAGTTGAAGATTACATGGG+AGG | + | chr4_1:56497210-56497229 | Msa0557950:intron | 35.0% | |
| !! | TTGTATACTCAGCTTTAAGC+TGG | - | chr4_1:56497297-56497316 | None:intergenic | 35.0% |
| AATGATTGACCAAGAACTCA+TGG | + | chr4_1:56497399-56497418 | Msa0557950:intron | 35.0% | |
| TATCATCTTGATCTTCGTCT+TGG | - | chr4_1:56497431-56497450 | None:intergenic | 35.0% | |
| ACTACGCTCATGTAATTAGA+AGG | + | chr4_1:56497515-56497534 | Msa0557950:intron | 35.0% | |
| ACAATCAGGCGTTAAACAAA+AGG | - | chr4_1:56497599-56497618 | None:intergenic | 35.0% | |
| CTAACAAAAAAGGAACTTCC+TGG | + | chr4_1:56497931-56497950 | Msa0557950:intron | 35.0% | |
| ! | GTATCCCTTTTATAATGACC+AGG | - | chr4_1:56497952-56497971 | None:intergenic | 35.0% |
| ACATAGCGTATATGCATTCT+TGG | - | chr4_1:56498049-56498068 | None:intergenic | 35.0% | |
| ! | CATGGCATTATTCTTTTGCA+TGG | + | chr4_1:56498143-56498162 | Msa0557950:intron | 35.0% |
| GTATTGCTAATGTACCCATA+CGG | + | chr4_1:56498241-56498260 | Msa0557950:CDS | 35.0% | |
| AAGTTTGACACTTGATGTAG+CGG | + | chr4_1:56498456-56498475 | Msa0557950:intron | 35.0% | |
| TCAGATTGAATGAATAGAGG+CGG | - | chr4_1:56498663-56498682 | None:intergenic | 35.0% | |
| ! | TATCCTCATGATTTTTGTGC+AGG | + | chr4_1:56498753-56498772 | Msa0557950:intron | 35.0% |
| ! | TTACTTTGTTGTACAGACCA+TGG | - | chr4_1:56498796-56498815 | None:intergenic | 35.0% |
| TGTCCATTGTCCTATTAACT+GGG | + | chr4_1:56498849-56498868 | Msa0557950:three_prime_UTR | 35.0% | |
| ATGAAAAGAAAAGGGATCAC+GGG | - | chr4_1:56499014-56499033 | None:intergenic | 35.0% | |
| CAAGGGACAATGAAAAGAAA+AGG | - | chr4_1:56499023-56499042 | None:intergenic | 35.0% | |
| GTAGTGTGTGAAGAAGTAAC+GGG | + | chr4_1:56495600-56495619 | Msa0557950:five_prime_UTR | 40.0% | |
| ! | CGTCGTCTTCTTTGTTTACT+TGG | - | chr4_1:56495660-56495679 | None:intergenic | 40.0% |
| GTAAACAAAGAAGACGACGA+CGG | + | chr4_1:56495661-56495680 | Msa0557950:CDS | 40.0% | |
| TAAATAGCAACTGACCGGAT+GGG | - | chr4_1:56495750-56495769 | None:intergenic | 40.0% | |
| ATAAATAGCAACTGACCGGA+TGG | - | chr4_1:56495751-56495770 | None:intergenic | 40.0% | |
| TGAAAGAGGAACAAAAGCTG+TGG | + | chr4_1:56495846-56495865 | Msa0557950:intron | 40.0% | |
| GGAACAAAAGCTGTGGAAAA+AGG | + | chr4_1:56495853-56495872 | Msa0557950:intron | 40.0% | |
| TAAAGGAAGCTTCAAGCTTC+AGG | - | chr4_1:56495902-56495921 | None:intergenic | 40.0% | |
| ! | GTGAACAGGTTTTGCTCAAA+TGG | + | chr4_1:56495988-56496007 | Msa0557950:intron | 40.0% |
| ! | GGTTTTGCTCAAATGGTTTG+TGG | + | chr4_1:56495995-56496014 | Msa0557950:intron | 40.0% |
| TATAACCCTGATACCATGTC+AGG | + | chr4_1:56496251-56496270 | Msa0557950:intron | 40.0% | |
| ATCTACGAAGATTTGGGTAG+TGG | - | chr4_1:56496357-56496376 | None:intergenic | 40.0% | |
| GAATGGTGAATGATCCGATA+TGG | - | chr4_1:56496397-56496416 | None:intergenic | 40.0% | |
| ! | ACATAAAGTGGAGGGTGTAA+AGG | - | chr4_1:56496484-56496503 | None:intergenic | 40.0% |
| CCACTTTGACATAAAGTGGA+GGG | - | chr4_1:56496492-56496511 | None:intergenic | 40.0% | |
| CCTCCACTTTATGTCAAAGT+GGG | + | chr4_1:56496490-56496509 | Msa0557950:intron | 40.0% | |
| TGTCCCACTTTGACATAAAG+TGG | - | chr4_1:56496496-56496515 | None:intergenic | 40.0% | |
| !! | GTGGGACATTTTGAAAAGAG+TGG | + | chr4_1:56496508-56496527 | Msa0557950:intron | 40.0% |
| TGTTTATGCCTCAAACAGAG+AGG | + | chr4_1:56496610-56496629 | Msa0557950:intron | 40.0% | |
| !! | CTTGAGAGCATTGAGCAATA+GGG | - | chr4_1:56496723-56496742 | None:intergenic | 40.0% |
| AATAGTTGTTACCGTCTAGG+TGG | - | chr4_1:56496817-56496836 | None:intergenic | 40.0% | |
| !! | TCATCAGCCATTTGCTGTTT+GGG | - | chr4_1:56496904-56496923 | None:intergenic | 40.0% |
| !! | TTCATCAGCCATTTGCTGTT+TGG | - | chr4_1:56496905-56496924 | None:intergenic | 40.0% |
| ACCTATTCCAATGACGTTCT+AGG | + | chr4_1:56496926-56496945 | Msa0557950:intron | 40.0% | |
| TCCTAGAACGTCATTGGAAT+AGG | - | chr4_1:56496930-56496949 | None:intergenic | 40.0% | |
| !! | ATTCCAATGACGTTCTAGGA+CGG | + | chr4_1:56496930-56496949 | Msa0557950:intron | 40.0% |
| ! | ATCAACCTGGCCCTAATTTT+AGG | + | chr4_1:56497031-56497050 | Msa0557950:intron | 40.0% |
| ! | TTGAAAATTGTGTCGGCGTT+AGG | - | chr4_1:56497127-56497146 | None:intergenic | 40.0% |
| ATAGTTGGAGTAGAACTGAG+CGG | - | chr4_1:56497167-56497186 | None:intergenic | 40.0% | |
| ! | TATCCTCTTTTGTCAATGGC+GGG | - | chr4_1:56497456-56497475 | None:intergenic | 40.0% |
| ! | CTATCCTCTTTTGTCAATGG+CGG | - | chr4_1:56497457-56497476 | None:intergenic | 40.0% |
| AGCACACAACTACCAATAAC+AGG | - | chr4_1:56497855-56497874 | None:intergenic | 40.0% | |
| AGGTTGGACAAGTTAAGTGT+GGG | + | chr4_1:56498209-56498228 | Msa0557950:CDS | 40.0% | |
| CATGATGAACACCTAACTTG+TGG | - | chr4_1:56498271-56498290 | None:intergenic | 40.0% | |
| AAGTTAGGTGTTCATCATGC+CGG | + | chr4_1:56498272-56498291 | Msa0557950:CDS | 40.0% | |
| CAGATTGAATGAATAGAGGC+GGG | - | chr4_1:56498662-56498681 | None:intergenic | 40.0% | |
| CAGTTAATAGGACAATGGAC+AGG | - | chr4_1:56498850-56498869 | None:intergenic | 40.0% | |
| CTGTCCATTGTCCTATTAAC+TGG | + | chr4_1:56498848-56498867 | Msa0557950:three_prime_UTR | 40.0% | |
| TGACCCAGTTAATAGGACAA+TGG | - | chr4_1:56498855-56498874 | None:intergenic | 40.0% | |
| ACAAGGATGACCCAGTTAAT+AGG | - | chr4_1:56498862-56498881 | None:intergenic | 40.0% | |
| AAGCTGTGGAAAAAGGGGTT+TGG | + | chr4_1:56495860-56495879 | Msa0557950:intron | 45.0% | |
| CATTTGACATGTTTGGCACC+TGG | - | chr4_1:56496049-56496068 | None:intergenic | 45.0% | |
| ATCTTCATCCAGTCCTGACA+TGG | - | chr4_1:56496267-56496286 | None:intergenic | 45.0% | |
| ! | TAACTGGGGTGTTACCTTCA+GGG | - | chr4_1:56496295-56496314 | None:intergenic | 45.0% |
| ! | ATAACTGGGGTGTTACCTTC+AGG | - | chr4_1:56496296-56496315 | None:intergenic | 45.0% |
| ! | TGGCTGGAGCTTTGATAACT+GGG | - | chr4_1:56496310-56496329 | None:intergenic | 45.0% |
| GTAGTGGTCCTTGAAAAGGA+CGG | - | chr4_1:56496341-56496360 | None:intergenic | 45.0% | |
| ! | TTGGGTAGTGGTCCTTGAAA+AGG | - | chr4_1:56496345-56496364 | None:intergenic | 45.0% |
| ATCGGATCATTCACCATTCG+TGG | + | chr4_1:56496398-56496417 | Msa0557950:intron | 45.0% | |
| CCCTCCACTTTATGTCAAAG+TGG | + | chr4_1:56496489-56496508 | Msa0557950:intron | 45.0% | |
| CCCACTTTGACATAAAGTGG+AGG | - | chr4_1:56496493-56496512 | None:intergenic | 45.0% | |
| ! | GCTTCCCCTTGTTTGTACTT+TGG | + | chr4_1:56496643-56496662 | Msa0557950:intron | 45.0% |
| !! | GCTTGAGAGCATTGAGCAAT+AGG | - | chr4_1:56496724-56496743 | None:intergenic | 45.0% |
| AATGGGGTGGTGCAAATGAT+TGG | - | chr4_1:56496788-56496807 | None:intergenic | 45.0% | |
| ! | TCATTTGCACCACCCCATTT+TGG | + | chr4_1:56496789-56496808 | Msa0557950:intron | 45.0% |
| GTCTAGGTGGTTCCAAAATG+GGG | - | chr4_1:56496804-56496823 | None:intergenic | 45.0% | |
| CGTCTAGGTGGTTCCAAAAT+GGG | - | chr4_1:56496805-56496824 | None:intergenic | 45.0% | |
| !!! | CCATTTTGGAACCACCTAGA+CGG | + | chr4_1:56496803-56496822 | Msa0557950:intron | 45.0% |
| CGCTGAAGAGTTCAGTATTG+AGG | - | chr4_1:56496859-56496878 | None:intergenic | 45.0% | |
| TGACTGACCCAAACAGCAAA+TGG | + | chr4_1:56496894-56496913 | Msa0557950:intron | 45.0% | |
| TGCCAGTCAAGTAGCCAAAA+TGG | - | chr4_1:56496956-56496975 | None:intergenic | 45.0% | |
| TAACCAGGATGACATCAACC+TGG | + | chr4_1:56497018-56497037 | Msa0557950:intron | 45.0% | |
| CTACTCCTAAAATTAGGGCC+AGG | - | chr4_1:56497039-56497058 | None:intergenic | 45.0% | |
| TGGGATATCATCATCGCTTG+GGG | - | chr4_1:56497080-56497099 | None:intergenic | 45.0% | |
| GTGGGATATCATCATCGCTT+GGG | - | chr4_1:56497081-56497100 | None:intergenic | 45.0% | |
| TGTGGGATATCATCATCGCT+TGG | - | chr4_1:56497082-56497101 | None:intergenic | 45.0% | |
| TAGTTGGAGTAGAACTGAGC+GGG | - | chr4_1:56497166-56497185 | None:intergenic | 45.0% | |
| TTGGTCAATCATTTCGCCAG+TGG | - | chr4_1:56497392-56497411 | None:intergenic | 45.0% | |
| ACAGCTTATGAGTTGCAGTG+CGG | - | chr4_1:56497555-56497574 | None:intergenic | 45.0% | |
| TGGACGAACAGTCCTGTTAT+TGG | + | chr4_1:56497840-56497859 | Msa0557950:intron | 45.0% | |
| ! | ATTGGTAGTTGTGTGCTTGC+TGG | + | chr4_1:56497858-56497877 | Msa0557950:intron | 45.0% |
| GCGTATATGCATTCTTGGAG+AGG | - | chr4_1:56498044-56498063 | None:intergenic | 45.0% | |
| ! | CAGGTTGGACAAGTTAAGTG+TGG | + | chr4_1:56498208-56498227 | Msa0557950:CDS | 45.0% |
| !! | TAACTTGTGGAGCACCGTAT+GGG | - | chr4_1:56498258-56498277 | None:intergenic | 45.0% |
| !! | TGCCGGTTTGTGACAGAAAT+CGG | + | chr4_1:56498289-56498308 | Msa0557950:CDS | 45.0% |
| ATCATCAATCCCCCTACACT+TGG | - | chr4_1:56498601-56498620 | None:intergenic | 45.0% | |
| TTGAATGAATAGAGGCGGGT+GGG | - | chr4_1:56498658-56498677 | None:intergenic | 45.0% | |
| ATTGAATGAATAGAGGCGGG+TGG | - | chr4_1:56498659-56498678 | None:intergenic | 45.0% | |
| CTGCCTGCACAAAAATCATG+AGG | - | chr4_1:56498759-56498778 | None:intergenic | 45.0% | |
| ! | CTTTGTTGTACAGACCATGG+AGG | - | chr4_1:56498793-56498812 | None:intergenic | 45.0% |
| AAACCAACTCCTCCCAAATC+TGG | + | chr4_1:56498814-56498833 | Msa0557950:CDS | 45.0% | |
| CTCCCAAATCTGGTTGTTAG+CGG | + | chr4_1:56498824-56498843 | Msa0557950:CDS | 45.0% | |
| AAAAGAAAAGGGATCACGGG+AGG | - | chr4_1:56499011-56499030 | None:intergenic | 45.0% | |
| TTGACATGTTTGGCACCTGG+TGG | - | chr4_1:56496046-56496065 | None:intergenic | 50.0% | |
| !! | CTAATTTTCGAGGAACCGGC+TGG | - | chr4_1:56496185-56496204 | None:intergenic | 50.0% |
| CCAGTCCTGACATGGTATCA+GGG | - | chr4_1:56496259-56496278 | None:intergenic | 50.0% | |
| TCCAGTCCTGACATGGTATC+AGG | - | chr4_1:56496260-56496279 | None:intergenic | 50.0% | |
| GATGAAGATACGACCCCTGA+AGG | + | chr4_1:56496278-56496297 | Msa0557950:intron | 50.0% | |
| ! | AACTGGGGTGTTACCTTCAG+GGG | - | chr4_1:56496294-56496313 | None:intergenic | 50.0% |
| ! | GGCTGGAGCTTTGATAACTG+GGG | - | chr4_1:56496309-56496328 | None:intergenic | 50.0% |
| ! | CTGGCTGGAGCTTTGATAAC+TGG | - | chr4_1:56496311-56496330 | None:intergenic | 50.0% |
| GTATTTAGCCTCCTCAGCAG+TGG | - | chr4_1:56496555-56496574 | None:intergenic | 50.0% | |
| !! | GAGCATTGAGCAATAGGGTG+AGG | - | chr4_1:56496718-56496737 | None:intergenic | 50.0% |
| TCAATGCTCTCAAGCCGACT+CGG | + | chr4_1:56496729-56496748 | Msa0557950:intron | 50.0% | |
| GGAATGAGAATGGAGCTGTC+AGG | - | chr4_1:56496767-56496786 | None:intergenic | 50.0% | |
| TAGGTGGTTCCAAAATGGGG+TGG | - | chr4_1:56496801-56496820 | None:intergenic | 50.0% | |
| CCGTCTAGGTGGTTCCAAAA+TGG | - | chr4_1:56496806-56496825 | None:intergenic | 50.0% | |
| !!! | ACGTTCTAGGACGGCCATTT+TGG | + | chr4_1:56496939-56496958 | Msa0557950:intron | 50.0% |
| !!! | GGCCATTTTGGCTACTTGAC+TGG | + | chr4_1:56496951-56496970 | Msa0557950:intron | 50.0% |
| TATCATCATCGCTTGGGGCT+AGG | - | chr4_1:56497075-56497094 | None:intergenic | 50.0% | |
| GCGTTAGGCACGACATTGTT+TGG | - | chr4_1:56497112-56497131 | None:intergenic | 50.0% | |
| CAACTCAAGACCTGCTGCAA+TGG | + | chr4_1:56497324-56497343 | Msa0557950:intron | 50.0% | |
| TGGCATGAGCCATGAGTTCT+TGG | - | chr4_1:56497411-56497430 | None:intergenic | 50.0% | |
| AGACCCGCCATTGACAAAAG+AGG | + | chr4_1:56497450-56497469 | Msa0557950:intron | 50.0% | |
| CAGCTTATGAGTTGCAGTGC+GGG | - | chr4_1:56497554-56497573 | None:intergenic | 50.0% | |
| TTCCTTCGTCACAGCTGATC+AGG | + | chr4_1:56498189-56498208 | Msa0557950:intron | 50.0% | |
| AACCTGATCAGCTGTGACGA+AGG | - | chr4_1:56498194-56498213 | None:intergenic | 50.0% | |
| TTCGTCACAGCTGATCAGGT+TGG | + | chr4_1:56498193-56498212 | Msa0557950:intron | 50.0% | |
| !! | CTAACTTGTGGAGCACCGTA+TGG | - | chr4_1:56498259-56498278 | None:intergenic | 50.0% |
| CATACGGTGCTCCACAAGTT+AGG | + | chr4_1:56498257-56498276 | Msa0557950:CDS | 50.0% | |
| !! | GCCGGTTTGTGACAGAAATC+GGG | + | chr4_1:56498290-56498309 | Msa0557950:CDS | 50.0% |
| CCCCGATTTCTGTCACAAAC+CGG | - | chr4_1:56498294-56498313 | None:intergenic | 50.0% | |
| ! | CCGGTTTGTGACAGAAATCG+GGG | + | chr4_1:56498291-56498310 | Msa0557950:CDS | 50.0% |
| TTGTGCAGGCAGACAACAAG+CGG | + | chr4_1:56498767-56498786 | Msa0557950:intron | 50.0% | |
| CAACCAGATTTGGGAGGAGT+TGG | - | chr4_1:56498820-56498839 | None:intergenic | 50.0% | |
| CGCTAACAACCAGATTTGGG+AGG | - | chr4_1:56498826-56498845 | None:intergenic | 50.0% | |
| GGCCGCTAACAACCAGATTT+GGG | - | chr4_1:56498829-56498848 | None:intergenic | 50.0% | |
| AGGCCGCTAACAACCAGATT+TGG | - | chr4_1:56498830-56498849 | None:intergenic | 50.0% | |
| ATAGGTTGCCAACCAGGTGG+CGG | - | chr4_1:56495688-56495707 | None:intergenic | 55.0% | |
| GGAATAGGTTGCCAACCAGG+TGG | - | chr4_1:56495691-56495710 | None:intergenic | 55.0% | |
| AACTGACCGGATGGGAGTGA+CGG | - | chr4_1:56495742-56495761 | None:intergenic | 55.0% | |
| ! | CTGGTGGATACGAAAGCAGG+CGG | - | chr4_1:56496030-56496049 | None:intergenic | 55.0% |
| ! | CACCTGGTGGATACGAAAGC+AGG | - | chr4_1:56496033-56496052 | None:intergenic | 55.0% |
| CCCTGATACCATGTCAGGAC+TGG | + | chr4_1:56496256-56496275 | Msa0557950:intron | 55.0% | |
| TGAAAAGGACGGAGGTCTGC+TGG | - | chr4_1:56496330-56496349 | None:intergenic | 55.0% | |
| ! | GCAGACCTCCGTCCTTTTCA+AGG | + | chr4_1:56496330-56496349 | Msa0557950:intron | 55.0% |
| GTGGTCCTTGAAAAGGACGG+AGG | - | chr4_1:56496338-56496357 | None:intergenic | 55.0% | |
| GGGATTGTTGGGTCCACGAA+TGG | - | chr4_1:56496414-56496433 | None:intergenic | 55.0% | |
| ! | CAGCAGTGGTGGAGTTCCAA+TGG | - | chr4_1:56496541-56496560 | None:intergenic | 55.0% |
| TTGGAACTCCACCACTGCTG+AGG | + | chr4_1:56496541-56496560 | Msa0557950:intron | 55.0% | |
| TTTAGCCTCCTCAGCAGTGG+TGG | - | chr4_1:56496552-56496571 | None:intergenic | 55.0% | |
| CCTGCAAGCCTCTCTGTTTG+AGG | - | chr4_1:56496621-56496640 | None:intergenic | 55.0% | |
| CCTCAAACAGAGAGGCTTGC+AGG | + | chr4_1:56496618-56496637 | Msa0557950:intron | 55.0% | |
| ! | CAATGCTCTCAAGCCGACTC+GGG | + | chr4_1:56496730-56496749 | Msa0557950:intron | 55.0% |
| ! | ACTCTTCAGCGCACTGATGC+AGG | + | chr4_1:56496868-56496887 | Msa0557950:intron | 55.0% |
| TGGCCGTCCTAGAACGTCAT+TGG | - | chr4_1:56496936-56496955 | None:intergenic | 55.0% | |
| TCGGCTGTATCCATTGCAGC+AGG | - | chr4_1:56497337-56497356 | None:intergenic | 55.0% | |
| GCTGCAATGGATACAGCCGA+AGG | + | chr4_1:56497337-56497356 | Msa0557950:intron | 55.0% | |
| ATGGATACAGCCGAAGGCTC+AGG | + | chr4_1:56497343-56497362 | Msa0557950:intron | 55.0% | |
| AACGGCTTGTCCTGAGCCTT+CGG | - | chr4_1:56497356-56497375 | None:intergenic | 55.0% | |
| AGTGGCGCGAAATGGGACAA+CGG | - | chr4_1:56497374-56497393 | None:intergenic | 55.0% | |
| TTTCGCCAGTGGCGCGAAAT+GGG | - | chr4_1:56497381-56497400 | None:intergenic | 55.0% | |
| ATTTCGCCAGTGGCGCGAAA+TGG | - | chr4_1:56497382-56497401 | None:intergenic | 55.0% | |
| TAGGTTGCCAACCAGGTGGC+GGG | - | chr4_1:56495687-56495706 | None:intergenic | 60.0% | |
| GGGGGAATAGGTTGCCAACC+AGG | - | chr4_1:56495694-56495713 | None:intergenic | 60.0% | |
| CGCCTGCTTTCGTATCCACC+AGG | + | chr4_1:56496028-56496047 | Msa0557950:CDS | 60.0% | |
| GAACTCCACCACTGCTGAGG+AGG | + | chr4_1:56496544-56496563 | Msa0557950:intron | 60.0% | |
| !! | GGGCCAGGTTGATGTCATCC+TGG | - | chr4_1:56497024-56497043 | None:intergenic | 60.0% |
| TGGGGCTAGGTGTGGAGTAC+AGG | - | chr4_1:56497062-56497081 | None:intergenic | 60.0% | |
| TCATCGCTTGGGGCTAGGTG+TGG | - | chr4_1:56497070-56497089 | None:intergenic | 60.0% | |
| GTTGTCCCATTTCGCGCCAC+TGG | + | chr4_1:56497373-56497392 | Msa0557950:intron | 60.0% | |
| CAGACAACAAGCGGCCTCCA+TGG | + | chr4_1:56498776-56498795 | Msa0557950:CDS | 60.0% | |
| GGGATCACGGGAGGAACAGA+AGG | - | chr4_1:56499002-56499021 | None:intergenic | 60.0% | |
| TGACCGGATGGGAGTGACGG+TGG | - | chr4_1:56495739-56495758 | None:intergenic | 65.0% | |
| AAGGACGGAGGTCTGCTGGC+TGG | - | chr4_1:56496326-56496345 | None:intergenic | 65.0% | |
| !! | CTCAAGCCGACTCGGGTCAC+TGG | + | chr4_1:56496737-56496756 | Msa0557950:intron | 65.0% |
| GGCGTTCCAGTGACCCGAGT+CGG | - | chr4_1:56496746-56496765 | None:intergenic | 65.0% | |
| ! | GGGCGTTGCGGTGGGGGAAT+AGG | - | chr4_1:56495706-56495725 | None:intergenic | 70.0% |
| TTCCCCCACCGCAACGCCCA+CGG | + | chr4_1:56495707-56495726 | Msa0557950:CDS | 70.0% | |
| ! | GATGGGAGTGACGGTGGCGG+TGG | - | chr4_1:56495733-56495752 | None:intergenic | 70.0% |
| CCGGATGGGAGTGACGGTGG+CGG | - | chr4_1:56495736-56495755 | None:intergenic | 70.0% | |
| CCGCCACCGTCACTCCCATC+CGG | + | chr4_1:56495733-56495752 | Msa0557950:CDS | 70.0% | |
| ACGACGGCCCGCCACCTGGT+TGG | + | chr4_1:56495677-56495696 | Msa0557950:CDS | 75.0% | |
| ! | TGGCCGTGGGCGTTGCGGTG+GGG | - | chr4_1:56495713-56495732 | None:intergenic | 75.0% |
| ! | GTGGCCGTGGGCGTTGCGGT+GGG | - | chr4_1:56495714-56495733 | None:intergenic | 75.0% |
| ! | GTGACGGTGGCGGTGGCCGT+GGG | - | chr4_1:56495726-56495745 | None:intergenic | 75.0% |
| ! | AGTGACGGTGGCGGTGGCCG+TGG | - | chr4_1:56495727-56495746 | None:intergenic | 75.0% |
| ! | GACGACGACGGCCCGCCACC+TGG | + | chr4_1:56495673-56495692 | Msa0557950:CDS | 80.0% |
| !! | GGCCGTGGGCGTTGCGGTGG+GGG | - | chr4_1:56495712-56495731 | None:intergenic | 80.0% |
| !! | GGTGGCCGTGGGCGTTGCGG+TGG | - | chr4_1:56495715-56495734 | None:intergenic | 80.0% |
| !! | GGCGGTGGCCGTGGGCGTTG+CGG | - | chr4_1:56495718-56495737 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 56495545 | 56499187 | 56495545 | ID=Msa0557950;Name=Msa0557950 |
| chr4_1 | mRNA | 56495545 | 56499187 | 56495545 | ID=Msa0557950-mRNA-1;Parent=Msa0557950;Name=Msa0557950-mRNA-1;_AED=0.15;_eAED=0.15;_QI=95|1|1|1|0.5|0.4|5|309|133 |
| chr4_1 | exon | 56495545 | 56495754 | 56495545 | ID=Msa0557950-mRNA-1:exon:16972;Parent=Msa0557950-mRNA-1 |
| chr4_1 | exon | 56495996 | 56496103 | 56495996 | ID=Msa0557950-mRNA-1:exon:16973;Parent=Msa0557950-mRNA-1 |
| chr4_1 | exon | 56498203 | 56498312 | 56498203 | ID=Msa0557950-mRNA-1:exon:16974;Parent=Msa0557950-mRNA-1 |
| chr4_1 | exon | 56498775 | 56499063 | 56498775 | ID=Msa0557950-mRNA-1:exon:16975;Parent=Msa0557950-mRNA-1 |
| chr4_1 | exon | 56499099 | 56499187 | 56499099 | ID=Msa0557950-mRNA-1:exon:16976;Parent=Msa0557950-mRNA-1 |
| chr4_1 | five_prime_UTR | 56495545 | 56495639 | 56495545 | ID=Msa0557950-mRNA-1:five_prime_utr;Parent=Msa0557950-mRNA-1 |
| chr4_1 | CDS | 56495640 | 56495754 | 56495640 | ID=Msa0557950-mRNA-1:cds;Parent=Msa0557950-mRNA-1 |
| chr4_1 | CDS | 56495996 | 56496103 | 56495996 | ID=Msa0557950-mRNA-1:cds;Parent=Msa0557950-mRNA-1 |
| chr4_1 | CDS | 56498203 | 56498312 | 56498203 | ID=Msa0557950-mRNA-1:cds;Parent=Msa0557950-mRNA-1 |
| chr4_1 | CDS | 56498775 | 56498843 | 56498775 | ID=Msa0557950-mRNA-1:cds;Parent=Msa0557950-mRNA-1 |
| chr4_1 | three_prime_UTR | 56498844 | 56499063 | 56498844 | ID=Msa0557950-mRNA-1:three_prime_utr;Parent=Msa0557950-mRNA-1 |
| chr4_1 | three_prime_UTR | 56499099 | 56499187 | 56499099 | ID=Msa0557950-mRNA-1:three_prime_utr;Parent=Msa0557950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
