Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306360 | XP_013447071.1 | 99.087 | 767 | 7 | 0 | 1 | 767 | 1 | 767 | 0.0 | 1591 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306360 | sp|Q38861|XPB1_ARATH | 85.547 | 768 | 105 | 5 | 1 | 764 | 1 | 766 | 0.0 | 1308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306360 | A0A072TW37 | 99.087 | 767 | 7 | 0 | 1 | 767 | 1 | 767 | 0.0 | 1591 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0087000 | Msa1306360 | 0.805435 | 1.336613e-49 | -8.615850e-47 |
| Msa0703730 | Msa1306360 | 0.808049 | 3.749047e-50 | -8.615850e-47 |
| Msa0792260 | Msa1306360 | 0.835734 | 1.412532e-56 | -8.615850e-47 |
| Msa0223380 | Msa1306360 | 0.810268 | 1.254340e-50 | -8.615850e-47 |
| Msa1246660 | Msa1306360 | 0.806484 | 8.044279e-50 | -8.615850e-47 |
| Msa1287650 | Msa1306360 | 0.829920 | 3.929582e-55 | -8.615850e-47 |
| Msa1287680 | Msa1306360 | 0.827740 | 1.323957e-54 | -8.615850e-47 |
| Msa1300350 | Msa1306360 | -0.815917 | 7.232185e-52 | -8.615850e-47 |
| Msa1306360 | Msa1306750 | 0.825628 | 4.225541e-54 | -8.615850e-47 |
| Msa1306360 | Msa1307740 | 0.818912 | 1.530414e-52 | -8.615850e-47 |
| Msa1306360 | Msa1309880 | 0.827710 | 1.346192e-54 | -8.615850e-47 |
| Msa1306360 | Msa1314770 | 0.809151 | 2.180551e-50 | -8.615850e-47 |
| Msa1306360 | Msa1348600 | 0.820076 | 8.300576e-53 | -8.615850e-47 |
| Msa1306360 | Msa1407650 | 0.804435 | 2.162960e-49 | -8.615850e-47 |
| Msa1306360 | Msa1451620 | -0.817388 | 3.384967e-52 | -8.615850e-47 |
| Msa0365490 | Msa1306360 | 0.824975 | 6.029809e-54 | -8.615850e-47 |
| Msa0377530 | Msa1306360 | 0.811676 | 6.215045e-51 | -8.615850e-47 |
| Msa0389810 | Msa1306360 | 0.816038 | 6.795312e-52 | -8.615850e-47 |
| Msa0436190 | Msa1306360 | 0.811745 | 6.003093e-51 | -8.615850e-47 |
| Msa0464900 | Msa1306360 | 0.807647 | 4.564000e-50 | -8.615850e-47 |
| Msa0468130 | Msa1306360 | 0.825588 | 4.318205e-54 | -8.615850e-47 |
| Msa0473240 | Msa1306360 | 0.838589 | 2.629638e-57 | -8.615850e-47 |
| Msa0480320 | Msa1306360 | 0.810889 | 9.209449e-51 | -8.615850e-47 |
| Msa0982270 | Msa1306360 | 0.816514 | 5.317778e-52 | -8.615850e-47 |
| Msa1085920 | Msa1306360 | 0.975665 | 2.267351e-140 | -8.615850e-47 |
| Msa0269520 | Msa1306360 | 0.808487 | 3.023429e-50 | -8.615850e-47 |
| Msa0344870 | Msa1306360 | 0.800756 | 1.241079e-48 | -8.615850e-47 |
| Msa1157020 | Msa1306360 | 0.800218 | 1.597984e-48 | -8.615850e-47 |
| Msa1171800 | Msa1306360 | 0.979960 | 3.965368e-149 | -8.615850e-47 |
| Msa0505060 | Msa1306360 | 0.810245 | 1.268529e-50 | -8.615850e-47 |
| Msa0517490 | Msa1306360 | 0.830612 | 2.662316e-55 | -8.615850e-47 |
| Msa0519190 | Msa1306360 | 0.803311 | 3.703936e-49 | -8.615850e-47 |
| Msa0526410 | Msa1306360 | 0.988710 | 4.237882e-175 | -8.615850e-47 |
| Msa0876850 | Msa1306360 | -0.800442 | 1.438798e-48 | -8.615850e-47 |
| Msa0930820 | Msa1306360 | 0.800769 | 1.233755e-48 | -8.615850e-47 |
| Msa0959010 | Msa1306360 | 0.819400 | 1.184690e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306360 | MtrunA17_Chr8g0387201 | 99.087 | 767 | 7 | 0 | 1 | 767 | 1 | 767 | 0.0 | 1591 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306360 | AT5G41370.1 | 85.547 | 768 | 105 | 5 | 1 | 764 | 1 | 766 | 0.0 | 1308 |
| Msa1306360 | AT5G41360.1 | 84.252 | 762 | 116 | 3 | 6 | 764 | 5 | 765 | 0.0 | 1295 |
| Msa1306360 | AT5G41360.2 | 83.574 | 761 | 118 | 4 | 6 | 763 | 5 | 761 | 0.0 | 1275 |
Find 176 sgRNAs with CRISPR-Local
Find 578 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACATGCTCGGAATTTATT+TGG | 0.143949 | 8_4:+1297706 | None:intergenic |
| CATGATTCCACTGCAAATTA+TGG | 0.166887 | 8_4:-1302056 | Msa1306360:CDS |
| TGATCAGGGTTACAGCTTTA+AGG | 0.171890 | 8_4:-1296452 | Msa1306360:intron |
| CTCCAACATGGGATAATTTA+AGG | 0.203128 | 8_4:+1299991 | None:intergenic |
| ACATATAATATGGTTGCTTT+TGG | 0.236023 | 8_4:-1298567 | Msa1306360:CDS |
| AACACCAACTAGGGACTTTC+CGG | 0.270811 | 8_4:+1298764 | None:intergenic |
| CTAAGGCTCTTCTCTTGATA+TGG | 0.277696 | 8_4:+1299212 | None:intergenic |
| AGGCTTCACCTGTCTCTTCT+TGG | 0.278361 | 8_4:+1298035 | None:intergenic |
| ATCACACAAATCGTCCTCTT+TGG | 0.280975 | 8_4:-1302398 | Msa1306360:CDS |
| ATGGGATAATTTAAGGCATT+TGG | 0.283714 | 8_4:+1299998 | None:intergenic |
| TTTAGTTCCATCTCGAGGTC+TGG | 0.295958 | 8_4:+1299254 | None:intergenic |
| CATTGGTTTGCGAAGTTTCA+TGG | 0.296729 | 8_4:+1297600 | None:intergenic |
| CATACAGTTTGGGACCAATT+AGG | 0.307490 | 8_4:+1298172 | None:intergenic |
| CCAATTTGCCTCATACAGTT+TGG | 0.314774 | 8_4:+1298161 | None:intergenic |
| TGAATTATCACATTTGCTTC+AGG | 0.315902 | 8_4:+1297058 | None:intergenic |
| AATTGGTTGGATCTTGTAAA+AGG | 0.316540 | 8_4:-1298144 | Msa1306360:CDS |
| TTCGCTGTATGCTGCGGTTT+CGG | 0.319268 | 8_4:-1302162 | Msa1306360:CDS |
| AGCGTCTGGGTCGTATTCTT+AGG | 0.321135 | 8_4:-1296997 | Msa1306360:CDS |
| ACAGATCTGAACTTCCTAAT+TGG | 0.321620 | 8_4:-1298186 | Msa1306360:CDS |
| CATATTTAGTCAAGTTCTAT+TGG | 0.326490 | 8_4:-1294341 | Msa1306360:three_prime_UTR |
| TGTCTCTTTGCTGGATCTTT+CGG | 0.327780 | 8_4:+1294617 | None:intergenic |
| TATTTGGATTCATCACATAA+AGG | 0.329096 | 8_4:+1297722 | None:intergenic |
| AAACCCTCGTGTGATTAAAA+AGG | 0.329957 | 8_4:-1294562 | Msa1306360:three_prime_UTR |
| ATATTTGCAGGTGCTGAAAA+AGG | 0.330555 | 8_4:-1302731 | Msa1306360:intron |
| ATATGGCCGTGGTTGTGCTT+GGG | 0.332017 | 8_4:+1299229 | None:intergenic |
| CCAAACTGTATGAGGCAAAT+TGG | 0.337223 | 8_4:-1298161 | Msa1306360:CDS |
| CTTCGCAAACCAATGATATA+TGG | 0.342358 | 8_4:-1297592 | Msa1306360:CDS |
| AACAGTATTTACGTCTTTGC+TGG | 0.343453 | 8_4:+1297435 | None:intergenic |
| AATAAGTGGTGTCTCTTTGC+TGG | 0.346134 | 8_4:+1294608 | None:intergenic |
| TCACACAAATCGTCCTCTTT+GGG | 0.353153 | 8_4:-1302397 | Msa1306360:CDS |
| CACTTATTTAGAAAACGATT+TGG | 0.355765 | 8_4:-1294593 | Msa1306360:CDS |
| ATTTGGATTCATCACATAAA+GGG | 0.355854 | 8_4:+1297723 | None:intergenic |
| AGAATGGGGATTGCTGCTTA+TGG | 0.362406 | 8_4:-1298493 | Msa1306360:CDS |
| AGCTTCCTAAAGAGATGATT+AGG | 0.364739 | 8_4:-1302085 | Msa1306360:CDS |
| CATAATTTGCAGTGGAATCA+TGG | 0.369119 | 8_4:+1302057 | None:intergenic |
| AAGAGCCTTAGTAAAATGTT+TGG | 0.369614 | 8_4:-1299200 | Msa1306360:CDS |
| ATAAACCTAATCATCTCTTT+AGG | 0.372165 | 8_4:+1302080 | None:intergenic |
| TGTTGTGACAACATATAATA+TGG | 0.372226 | 8_4:-1298577 | Msa1306360:CDS |
| TTGGTGTTTCAGCAGCTTCC+CGG | 0.376812 | 8_4:-1298749 | Msa1306360:CDS |
| GCGTCAAGAAGCACAGCGTC+TGG | 0.379944 | 8_4:-1297011 | Msa1306360:CDS |
| CCATCGCCGAGCCCGTTTGC+AGG | 0.382900 | 8_4:-1302302 | Msa1306360:intron |
| CTTGTAGCACCATATATCAT+TGG | 0.385865 | 8_4:+1297583 | None:intergenic |
| CAATTTGCCTCATACAGTTT+GGG | 0.388906 | 8_4:+1298162 | None:intergenic |
| TAAATGGCAGGGAAAGCTTC+AGG | 0.390345 | 8_4:-1296721 | Msa1306360:intron |
| CCCTGTGTGGTGAGGTCACC+AGG | 0.399682 | 8_4:+1294391 | None:intergenic |
| TTAGTTCCATCTCGAGGTCT+GGG | 0.406412 | 8_4:+1299255 | None:intergenic |
| ATGATTCCACTGCAAATTAT+GGG | 0.410450 | 8_4:-1302055 | Msa1306360:CDS |
| CTTAGTAAAATGTTTGGAAA+TGG | 0.416991 | 8_4:-1299194 | Msa1306360:intron |
| ACTAAATCTCACTGCAAACT+TGG | 0.417365 | 8_4:-1298330 | Msa1306360:CDS |
| AGTCTTATACATCGAAATCA+TGG | 0.418433 | 8_4:-1302836 | Msa1306360:exon |
| TCGGCTTGCTCTTGATCTGT+TGG | 0.423357 | 8_4:+1294636 | None:intergenic |
| AGAAATAAGAAACAGAGAAT+GGG | 0.424172 | 8_4:-1298508 | Msa1306360:CDS |
| GATATGGCCGTGGTTGTGCT+TGG | 0.426514 | 8_4:+1299228 | None:intergenic |
| TATCACCACGTGCCCTTTCG+TGG | 0.435050 | 8_4:+1297668 | None:intergenic |
| TCATCATCTCGATGATCAAC+TGG | 0.437109 | 8_4:-1295067 | Msa1306360:CDS |
| AAGAAATAAGAAACAGAGAA+TGG | 0.440448 | 8_4:-1298509 | Msa1306360:CDS |
| CCTCTTTGGGCTTGTGACAA+TGG | 0.452599 | 8_4:-1302384 | Msa1306360:CDS |
| TTTGTACCTGCAAACGGGCT+CGG | 0.455277 | 8_4:+1302296 | None:intergenic |
| AATCATCTCTTTAGGAAGCT+TGG | 0.456652 | 8_4:+1302088 | None:intergenic |
| CACTGCAAACTTGGGCTCAC+AGG | 0.460451 | 8_4:-1298321 | Msa1306360:intron |
| AATTGGTCCCAAACTGTATG+AGG | 0.461446 | 8_4:-1298169 | Msa1306360:CDS |
| CAAGAGAAAGATTGTTATGA+TGG | 0.462522 | 8_4:-1294263 | Msa1306360:three_prime_UTR |
| AGAGGACGATTTGTGTGATC+CGG | 0.463995 | 8_4:+1302402 | None:intergenic |
| TCTCTTCACATGCTGGTTCA+AGG | 0.464065 | 8_4:-1297033 | Msa1306360:CDS |
| ATGTACAGTGTGCTGAAGTA+TGG | 0.466560 | 8_4:-1298107 | Msa1306360:CDS |
| AGGTATTGAAAACATTGCTC+AGG | 0.471562 | 8_4:-1301885 | Msa1306360:CDS |
| ACCTATCAGGTATTGAATGC+TGG | 0.476448 | 8_4:-1294968 | Msa1306360:intron |
| TTCTCATAAATTACCACGAA+AGG | 0.478217 | 8_4:-1297681 | Msa1306360:CDS |
| TCTCTTGTACTGTATATTCG+TGG | 0.478889 | 8_4:+1294279 | None:intergenic |
| TAGCAAATTAGAGTTGAAAC+CGG | 0.479614 | 8_4:-1302421 | Msa1306360:CDS |
| ATAGTTCTACCTTGTGGTGC+CGG | 0.479656 | 8_4:-1298783 | Msa1306360:CDS |
| CTCTTCTCTTGATATGGCCG+TGG | 0.488835 | 8_4:+1299218 | None:intergenic |
| CAAATCTAGATTACCTGAGC+AGG | 0.493252 | 8_4:+1301207 | None:intergenic |
| AGTGCAATGTCAGGTGCAAA+AGG | 0.493706 | 8_4:-1294860 | Msa1306360:CDS |
| CTGTATGCTGCGGTTTCGGT+TGG | 0.496346 | 8_4:-1302158 | Msa1306360:CDS |
| GCGTCTGGGTCGTATTCTTA+GGG | 0.498202 | 8_4:-1296996 | Msa1306360:CDS |
| TTGTATTCGTGCATCGACTC+TGG | 0.499316 | 8_4:+1302197 | None:intergenic |
| ATTCAGATCTCTTCACATGC+TGG | 0.501954 | 8_4:-1297040 | Msa1306360:CDS |
| GTTTAGGGTACTCATGGAGA+TGG | 0.502400 | 8_4:-1301345 | Msa1306360:intron |
| CATTTACACACCTCTGGAAA+CGG | 0.502414 | 8_4:+1301987 | None:intergenic |
| GTCGTCATCGTAAGCATCAT+CGG | 0.503028 | 8_4:+1302543 | None:intergenic |
| CAATGATATATGGTGCTACA+AGG | 0.508056 | 8_4:-1297582 | Msa1306360:intron |
| GGATGGTTTATGTGGAGTAC+AGG | 0.509532 | 8_4:-1294838 | Msa1306360:intron |
| TGGTTGGATCTTGTAAAAGG+TGG | 0.512861 | 8_4:-1298141 | Msa1306360:CDS |
| TACATAATTACATTAACTTG+TGG | 0.516375 | 8_4:-1294442 | Msa1306360:three_prime_UTR |
| TCTTATACTCAAATATATCC+TGG | 0.516646 | 8_4:-1294409 | Msa1306360:three_prime_UTR |
| TGCCGTCTCTGTGGATCAGT+GGG | 0.520735 | 8_4:-1298694 | Msa1306360:CDS |
| GGATCGATGAGTGCAATGTC+AGG | 0.522160 | 8_4:-1294869 | Msa1306360:CDS |
| TCTCATAAATTACCACGAAA+GGG | 0.522463 | 8_4:-1297680 | Msa1306360:CDS |
| ACTGTATGAGGCAAATTGGT+TGG | 0.524427 | 8_4:-1298157 | Msa1306360:CDS |
| TAAGAAGAATCGTTACTATG+TGG | 0.527424 | 8_4:-1302015 | Msa1306360:CDS |
| TGCCTTAAATTATCCCATGT+TGG | 0.531333 | 8_4:-1299993 | Msa1306360:CDS |
| GAGAGATTCCGTGGTAACGC+TGG | 0.532353 | 8_4:-1298603 | Msa1306360:CDS |
| TGCAGCTACACTTGTGAGAG+AGG | 0.532637 | 8_4:-1298220 | Msa1306360:intron |
| AAAAGTGCTCGTCGTTCTCA+AGG | 0.533168 | 8_4:-1294890 | Msa1306360:CDS |
| AAGCTGCTGAAACACCAACT+AGG | 0.535810 | 8_4:+1298754 | None:intergenic |
| ATGCCGTCTCTGTGGATCAG+TGG | 0.537416 | 8_4:-1298695 | Msa1306360:CDS |
| AAGCTTCAGGATAGGATGGC+TGG | 0.541968 | 8_4:-1296708 | Msa1306360:CDS |
| CCTGCAAACGGGCTCGGCGA+TGG | 0.542090 | 8_4:+1302302 | None:intergenic |
| GAAATAAGAAACAGAGAATG+GGG | 0.543248 | 8_4:-1298507 | Msa1306360:CDS |
| TGCAAAAGGGATGGTTTATG+TGG | 0.544520 | 8_4:-1294846 | Msa1306360:CDS |
| ATAAATGTGTACCTGGGTAT+CGG | 0.546776 | 8_4:+1296641 | None:intergenic |
| AGAGAACTCCAAGAAGAGAC+AGG | 0.548803 | 8_4:-1298043 | Msa1306360:intron |
| GACTTTCCCATAATTTGCAG+TGG | 0.549017 | 8_4:+1302049 | None:intergenic |
| AACGACATATTTGTTCATCT+CGG | 0.550470 | 8_4:+1298643 | None:intergenic |
| AGCTTGCCTCCATCTGATGA+AGG | 0.551771 | 8_4:-1295105 | Msa1306360:CDS |
| CCTGGGTATCGGTCGACACA+AGG | 0.553236 | 8_4:+1296652 | None:intergenic |
| ATTCGAAATTGATCCTGCTC+AGG | 0.555292 | 8_4:-1301220 | Msa1306360:intron |
| CGTCAAGAAGCACAGCGTCT+GGG | 0.556542 | 8_4:-1297010 | Msa1306360:CDS |
| CCTTGTGTCGACCGATACCC+AGG | 0.557821 | 8_4:-1296652 | Msa1306360:intron |
| GCGAAGTTTCATGGCATACT+CGG | 0.560609 | 8_4:+1297609 | None:intergenic |
| CTAAATCTCACTGCAAACTT+GGG | 0.561239 | 8_4:-1298329 | Msa1306360:CDS |
| ACAAGGTAGAACTATGATAC+CGG | 0.568352 | 8_4:+1298791 | None:intergenic |
| AAGTCATACTCCTCCAACAT+GGG | 0.569092 | 8_4:+1299980 | None:intergenic |
| GTCTTATACATCGAAATCAT+GGG | 0.570971 | 8_4:-1302835 | Msa1306360:exon |
| TATGGCCGTGGTTGTGCTTG+GGG | 0.571603 | 8_4:+1299230 | None:intergenic |
| ATGACAATAATCAAGAATGC+AGG | 0.572001 | 8_4:-1294501 | Msa1306360:three_prime_UTR |
| TTATGAGAAACTCACATGCT+CGG | 0.574806 | 8_4:+1297695 | None:intergenic |
| AGCTGCTGAAACACCAACTA+GGG | 0.575072 | 8_4:+1298755 | None:intergenic |
| CCTTCAGGTAGAGCAAGATC+CGG | 0.580416 | 8_4:-1298810 | Msa1306360:intron |
| TCATAAGCTTGTTTGTACAA+AGG | 0.583537 | 8_4:+1302336 | None:intergenic |
| ATAAGTATCATCATCATCAT+CGG | 0.584559 | 8_4:+1302570 | None:intergenic |
| GGGATTGCTGCTTATGGACG+AGG | 0.585259 | 8_4:-1298487 | Msa1306360:intron |
| GGGTCGTATTCTTAGGGCAA+AGG | 0.588925 | 8_4:-1296990 | Msa1306360:intron |
| AGATGTATTACTCAACTAAG+AGG | 0.589026 | 8_4:-1296489 | Msa1306360:CDS |
| GGGAAAGCTTCAGGATAGGA+TGG | 0.590165 | 8_4:-1296712 | Msa1306360:CDS |
| ACCGCATTCGCTGTATGCTG+CGG | 0.590897 | 8_4:-1302168 | Msa1306360:CDS |
| AATGCTGGTGATGATGCAGT+TGG | 0.591042 | 8_4:-1294953 | Msa1306360:CDS |
| TCCTGGTGACCTCACCACAC+AGG | 0.592766 | 8_4:-1294392 | Msa1306360:three_prime_UTR |
| TTATTTGCAGCCATGTTGAG+AGG | 0.593332 | 8_4:-1297483 | Msa1306360:intron |
| GATGATCAACTGGCACTACT+CGG | 0.594721 | 8_4:-1295057 | Msa1306360:CDS |
| CTTAAATTATCCCATGTTGG+AGG | 0.600247 | 8_4:-1299990 | Msa1306360:CDS |
| TGCAGTACTGGGCGTAACAA+AGG | 0.602107 | 8_4:-1294659 | Msa1306360:intron |
| CCTGGTGACCTCACCACACA+GGG | 0.602612 | 8_4:-1294391 | Msa1306360:three_prime_UTR |
| AAAGCACTAGGTGAGATTGA+AGG | 0.606763 | 8_4:-1301309 | Msa1306360:CDS |
| TTTACAATCAGCAAAGCACT+AGG | 0.610051 | 8_4:-1301321 | Msa1306360:CDS |
| CGAGATGATGATAGTGCAAG+CGG | 0.611865 | 8_4:+1295079 | None:intergenic |
| GGTGCCGGAAAGTCCCTAGT+TGG | 0.612274 | 8_4:-1298768 | Msa1306360:CDS |
| TAAAGCCCCAAGCACAACCA+CGG | 0.615153 | 8_4:-1299235 | Msa1306360:CDS |
| GGGGCTTTAGTTCCATCTCG+AGG | 0.618388 | 8_4:+1299249 | None:intergenic |
| AACATCAACCCTGTGTGGTG+AGG | 0.619584 | 8_4:+1294383 | None:intergenic |
| AAGCGGGATCCTTCATCAGA+TGG | 0.620834 | 8_4:+1295096 | None:intergenic |
| AATGTCAGGTGCAAAAGGGA+TGG | 0.623263 | 8_4:-1294855 | Msa1306360:CDS |
| ATGATGCTATATCGCGAGCA+AGG | 0.624247 | 8_4:-1301861 | Msa1306360:CDS |
| GGTATTGAAAACATTGCTCA+GGG | 0.625571 | 8_4:-1301884 | Msa1306360:CDS |
| ACCGCAGCATACAGCGAATG+CGG | 0.628106 | 8_4:+1302167 | None:intergenic |
| TCAACTGGCACTACTCGGAA+AGG | 0.628539 | 8_4:-1295052 | Msa1306360:intron |
| TAATTATGTAACTTATGTTG+AGG | 0.632956 | 8_4:+1294455 | None:intergenic |
| GGCAACAAATGCCGTCTCTG+TGG | 0.633215 | 8_4:-1298703 | Msa1306360:CDS |
| CAACAACTCCAGCGTTACCA+CGG | 0.635366 | 8_4:+1298595 | None:intergenic |
| TAGGATGGCTGGTGGCAAAG+AGG | 0.635488 | 8_4:-1296697 | Msa1306360:CDS |
| GAAGTCATACTCCTCCAACA+TGG | 0.636793 | 8_4:+1299979 | None:intergenic |
| GGCAGGGAAAGCTTCAGGAT+AGG | 0.638026 | 8_4:-1296716 | Msa1306360:intron |
| AGCCCACTGATCCACAGAGA+CGG | 0.638964 | 8_4:+1298692 | None:intergenic |
| GGTGAACCCAGACCTCGAGA+TGG | 0.640415 | 8_4:-1299261 | Msa1306360:CDS |
| GCGAGCAAGGATCACTTCTG+AGG | 0.642760 | 8_4:-1301848 | Msa1306360:intron |
| GGTATCATAGTTCTACCTTG+TGG | 0.642998 | 8_4:-1298789 | Msa1306360:CDS |
| CGGGATCCTTCATCAGATGG+AGG | 0.648662 | 8_4:+1295099 | None:intergenic |
| ATTATACAGACGCCACCGCA+TGG | 0.651372 | 8_4:+1294537 | None:intergenic |
| GCATGATAAACAGGTGCACG+TGG | 0.651390 | 8_4:-1298388 | Msa1306360:intron |
| GTGCAATGTCAGGTGCAAAA+GGG | 0.652794 | 8_4:-1294859 | Msa1306360:CDS |
| GACAGCAAAGAGAGATTCCG+TGG | 0.654068 | 8_4:-1298612 | Msa1306360:CDS |
| AGGGACTTTCCGGCACCACA+AGG | 0.657347 | 8_4:+1298774 | None:intergenic |
| AGAAAGTCTCAAGGAAAATG+CGG | 0.658900 | 8_4:+1302361 | None:intergenic |
| TGTGGAATCTCCGTTTCCAG+AGG | 0.660689 | 8_4:-1301997 | Msa1306360:intron |
| GAGATGATGATAGTGCAAGC+GGG | 0.661161 | 8_4:+1295080 | None:intergenic |
| GAAACTAACGAATTTAGCAG+CGG | 0.670070 | 8_4:+1302685 | None:intergenic |
| CTGGGTATCGGTCGACACAA+GGG | 0.670656 | 8_4:+1296653 | None:intergenic |
| ACAAAGGTGAGAAAGTCTCA+AGG | 0.672300 | 8_4:+1302352 | None:intergenic |
| GCTAAATCAAGCAGAAGTAG+CGG | 0.672882 | 8_4:-1301271 | Msa1306360:CDS |
| CCATTGTCACAAGCCCAAAG+AGG | 0.674133 | 8_4:+1302384 | None:intergenic |
| AATTACCACGAAAGGGCACG+TGG | 0.685034 | 8_4:-1297673 | Msa1306360:CDS |
| CTTCAGGATAGGATGGCTGG+TGG | 0.687755 | 8_4:-1296705 | Msa1306360:CDS |
| TACATCGAAATCATGGGACA+CGG | 0.694471 | 8_4:-1302829 | Msa1306360:intron |
| AATCAAACATCAACCCTGTG+TGG | 0.698865 | 8_4:+1294378 | None:intergenic |
| GATGATGCTTACGATGACGA+CGG | 0.737584 | 8_4:-1302541 | Msa1306360:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACATTTTTAAAGATTAAAA+AGG | + | chr8_4:1296386-1296405 | None:intergenic | 10.0% |
| !! | AATAAAATAATTGAAATGAA+TGG | + | chr8_4:1297202-1297221 | None:intergenic | 10.0% |
| !!! | ATATATAATGTTATTTGATT+GGG | + | chr8_4:1297629-1297648 | None:intergenic | 10.0% |
| !!! | TATATATAATGTTATTTGAT+TGG | + | chr8_4:1297630-1297649 | None:intergenic | 10.0% |
| !! | AATCAAATAACATTATATAT+AGG | - | chr8_4:1297629-1297648 | Msa1306360:CDS | 10.0% |
| !! | AATCTTTAGTTAAAATTATA+AGG | - | chr8_4:1299038-1299057 | Msa1306360:intron | 10.0% |
| !! | AAAATAAAACTAAAAAAAAC+AGG | + | chr8_4:1299648-1299667 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAGTTTTATTTTG+AGG | - | chr8_4:1299649-1299668 | Msa1306360:intron | 10.0% |
| !! | TTTATTAATTCTGAATTTAT+TGG | - | chr8_4:1300139-1300158 | Msa1306360:intron | 10.0% |
| !!! | ATTTCAAAAAAATAGATTTT+GGG | + | chr8_4:1300890-1300909 | None:intergenic | 10.0% |
| !!! | TATTTCAAAAAAATAGATTT+TGG | + | chr8_4:1300891-1300910 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAACACTTTTTT+TGG | - | chr8_4:1300947-1300966 | Msa1306360:intron | 10.0% |
| !!! | AAAAAAAAAACACTTTTTTT+GGG | - | chr8_4:1300948-1300967 | Msa1306360:intron | 10.0% |
| !!! | TAAAAAAAAATACTTTTTTC+GGG | - | chr8_4:1301024-1301043 | Msa1306360:intron | 10.0% |
| !! | TTTCAATTAATTATCTCATT+AGG | - | chr8_4:1294528-1294547 | Msa1306360:three_prime_UTR | 15.0% |
| !! | TTCAATTAATTATCTCATTA+GGG | - | chr8_4:1294529-1294548 | Msa1306360:three_prime_UTR | 15.0% |
| !! | ATAATAATAATACGACTAAA+TGG | + | chr8_4:1295910-1295929 | None:intergenic | 15.0% |
| !! | TAGTCGTATTATTATTATAA+AGG | - | chr8_4:1295912-1295931 | Msa1306360:intron | 15.0% |
| !!! | GAATTTGTTTTCTTAAAAAA+GGG | + | chr8_4:1296238-1296257 | None:intergenic | 15.0% |
| !!! | TGAATTTGTTTTCTTAAAAA+AGG | + | chr8_4:1296239-1296258 | None:intergenic | 15.0% |
| !! | ATGTAATTTATCTTCTTAAA+TGG | - | chr8_4:1296643-1296662 | Msa1306360:intron | 15.0% |
| !!! | CTTTATTTAAAGTTTCAAAA+AGG | + | chr8_4:1296774-1296793 | None:intergenic | 15.0% |
| !! | GAAACTTTAAATAAAGTTAA+AGG | - | chr8_4:1296778-1296797 | Msa1306360:intron | 15.0% |
| !!! | AATTTAAAATAAAATTTGCC+GGG | + | chr8_4:1297932-1297951 | None:intergenic | 15.0% |
| !!! | CAATTTAAAATAAAATTTGC+CGG | + | chr8_4:1297933-1297952 | None:intergenic | 15.0% |
| !!! | TGTCTAAAATATTATGTTAA+CGG | - | chr8_4:1298069-1298088 | Msa1306360:CDS | 15.0% |
| !!! | ATAGATTATTTAAGTTAGAA+TGG | - | chr8_4:1299742-1299761 | Msa1306360:intron | 15.0% |
| !!! | TAGATTATTTAAGTTAGAAT+GGG | - | chr8_4:1299743-1299762 | Msa1306360:intron | 15.0% |
| !! | TAAAAAAAAAGATGTTAACA+TGG | + | chr8_4:1299879-1299898 | None:intergenic | 15.0% |
| !! | AAATTTAGTATTCAATATGT+AGG | + | chr8_4:1300181-1300200 | None:intergenic | 15.0% |
| !! | ATTCAAATTCATGAATTAAA+TGG | - | chr8_4:1300299-1300318 | Msa1306360:intron | 15.0% |
| !! | ATCCAATAATCAATAATATA+TGG | + | chr8_4:1300432-1300451 | None:intergenic | 15.0% |
| !!! | CGTTTGTTTTAATTTTTTTA+GGG | - | chr8_4:1300748-1300767 | Msa1306360:intron | 15.0% |
| !!! | GTTTGTTTTAATTTTTTTAG+GGG | - | chr8_4:1300749-1300768 | Msa1306360:intron | 15.0% |
| !!! | TTTTTTTTTAGTGTTTGTTT+AGG | - | chr8_4:1300793-1300812 | Msa1306360:intron | 15.0% |
| !!! | ATCTATTTTTTTGAAATACA+AGG | - | chr8_4:1300893-1300912 | Msa1306360:intron | 15.0% |
| !!! | ATAGTTTTTTTATATGTAAC+AGG | - | chr8_4:1301900-1301919 | Msa1306360:intron | 15.0% |
| !! | TCTTAATTAAGAATTCAAAA+AGG | + | chr8_4:1302295-1302314 | None:intergenic | 15.0% |
| !! | TTAATCTTGATGAATTGATT+GGG | + | chr8_4:1294259-1294278 | None:intergenic | 20.0% |
| !! | AATTTCAATTTCATATTTGC+AGG | - | chr8_4:1294293-1294312 | Msa1306360:three_prime_UTR | 20.0% |
| !!! | TTTCTTATATTATTTTCCAC+AGG | - | chr8_4:1294422-1294441 | Msa1306360:three_prime_UTR | 20.0% |
| !!! | TCATTAGGGTTTTTTTATTT+GGG | - | chr8_4:1294543-1294562 | Msa1306360:three_prime_UTR | 20.0% |
| !! | TTCTAAACTACAATTGTATA+GGG | + | chr8_4:1295654-1295673 | None:intergenic | 20.0% |
| !! | ATTCTAAACTACAATTGTAT+AGG | + | chr8_4:1295655-1295674 | None:intergenic | 20.0% |
| !!! | TTGAGTTTTTTTTTTTTTGC+AGG | - | chr8_4:1295849-1295868 | Msa1306360:intron | 20.0% |
| !!! | TTTTCTAAAATGCAATACAT+TGG | + | chr8_4:1296036-1296055 | None:intergenic | 20.0% |
| !! | TTAAAAAATGTCAACAATGT+TGG | + | chr8_4:1296717-1296736 | None:intergenic | 20.0% |
| !! | AAATAAAGTTAAAGGATTTC+TGG | - | chr8_4:1296786-1296805 | Msa1306360:intron | 20.0% |
| !!! | TAGTTTTGCCTTAATAATAT+AGG | - | chr8_4:1296811-1296830 | Msa1306360:intron | 20.0% |
| !!! | AGTTTTGCCTTAATAATATA+GGG | - | chr8_4:1296812-1296831 | Msa1306360:intron | 20.0% |
| !! | TTATCTATACCTATGTATAA+AGG | - | chr8_4:1297136-1297155 | Msa1306360:intron | 20.0% |
| !! | TATCTATACCTATGTATAAA+GGG | - | chr8_4:1297137-1297156 | Msa1306360:intron | 20.0% |
| !! | CAAAAAATCAGTCATTTAAT+TGG | + | chr8_4:1297246-1297265 | None:intergenic | 20.0% |
| !!! | TTTATTGGTTTAAATCATTG+TGG | - | chr8_4:1297365-1297384 | Msa1306360:intron | 20.0% |
| !!! | TTATTGGTTTAAATCATTGT+GGG | - | chr8_4:1297366-1297385 | Msa1306360:intron | 20.0% |
| !! | TCTGAAAAAAAAAATCATTG+TGG | - | chr8_4:1297389-1297408 | Msa1306360:intron | 20.0% |
| !! | CTGAAAAAAAAAATCATTGT+GGG | - | chr8_4:1297390-1297409 | Msa1306360:intron | 20.0% |
| !! | TGGTATCAACTTTATATATA+GGG | + | chr8_4:1297534-1297553 | None:intergenic | 20.0% |
| !! | TTGGTATCAACTTTATATAT+AGG | + | chr8_4:1297535-1297554 | None:intergenic | 20.0% |
| !! | GTTATTATCTTGCAAATTTA+TGG | - | chr8_4:1297699-1297718 | Msa1306360:CDS | 20.0% |
| !!! | TTTTTTTTTCTTTTTCCTAC+AGG | - | chr8_4:1297754-1297773 | Msa1306360:intron | 20.0% |
| !!! | TTAAGAGGATTTTTTTTTGT+TGG | + | chr8_4:1298000-1298019 | None:intergenic | 20.0% |
| !! | TATAACAACAACAAATTAAG+AGG | + | chr8_4:1298015-1298034 | None:intergenic | 20.0% |
| !!! | GTCTAAAATATTATGTTAAC+GGG | - | chr8_4:1298070-1298089 | Msa1306360:CDS | 20.0% |
| !!! | TCTAAAATATTATGTTAACG+GGG | - | chr8_4:1298071-1298090 | Msa1306360:CDS | 20.0% |
| !! | TGTTAATACTATTGATATTG+TGG | - | chr8_4:1299847-1299866 | Msa1306360:intron | 20.0% |
| !! | GTTAATACTATTGATATTGT+GGG | - | chr8_4:1299848-1299867 | Msa1306360:intron | 20.0% |
| !! | AATACTTAAACTATCATTCA+AGG | - | chr8_4:1300471-1300490 | Msa1306360:intron | 20.0% |
| !!! | AGGTATTTTCTTTCAATTTT+CGG | - | chr8_4:1300604-1300623 | Msa1306360:intron | 20.0% |
| !!! | GCGTTTGTTTTAATTTTTTT+AGG | - | chr8_4:1300747-1300766 | Msa1306360:intron | 20.0% |
| !!! | TATTTTTTTGAAATACAAGG+AGG | - | chr8_4:1300896-1300915 | Msa1306360:intron | 20.0% |
| !! | CTTACTTTAAATTAGACAAA+GGG | + | chr8_4:1301164-1301183 | None:intergenic | 20.0% |
| !! | ACTTACTTTAAATTAGACAA+AGG | + | chr8_4:1301165-1301184 | None:intergenic | 20.0% |
| !!! | TTGTCTAATTTAAAGTAAGT+TGG | - | chr8_4:1301165-1301184 | Msa1306360:intron | 20.0% |
| !!! | AATGAGTAAAAGCTTTTATT+TGG | - | chr8_4:1301306-1301325 | Msa1306360:CDS | 20.0% |
| !!! | AACTTATTTTTTATGCTCAA+TGG | - | chr8_4:1301771-1301790 | Msa1306360:intron | 20.0% |
| !!! | TGAGAATTTGAAATTTTTGT+TGG | - | chr8_4:1301835-1301854 | Msa1306360:intron | 20.0% |
| !! | ATTCTTAATTAAGAACTTGA+TGG | - | chr8_4:1302301-1302320 | Msa1306360:intron | 20.0% |
| !! | TTCTTAATTAAGAACTTGAT+GGG | - | chr8_4:1302302-1302321 | Msa1306360:intron | 20.0% |
| !! | TTAAATTCTTTGATGCTAAT+TGG | - | chr8_4:1302342-1302361 | Msa1306360:CDS | 20.0% |
| !! | TAATTATGTAACTTATGTTG+AGG | + | chr8_4:1302584-1302603 | None:intergenic | 20.0% |
| !!! | TACATAATTACATTAACTTG+TGG | - | chr8_4:1302594-1302613 | Msa1306360:CDS | 20.0% |
| !!! | AAATTGTGTTTTAGACTTTT+AGG | - | chr8_4:1302799-1302818 | Msa1306360:intron | 20.0% |
| ! | GTTAATCTTGATGAATTGAT+TGG | + | chr8_4:1294260-1294279 | None:intergenic | 25.0% |
| ! | ATAAGTATCATCATCATCAT+CGG | + | chr8_4:1294469-1294488 | None:intergenic | 25.0% |
| !!! | CTCATTAGGGTTTTTTTATT+TGG | - | chr8_4:1294542-1294561 | Msa1306360:three_prime_UTR | 25.0% |
| !!! | CATTAGGGTTTTTTTATTTG+GGG | - | chr8_4:1294544-1294563 | Msa1306360:three_prime_UTR | 25.0% |
| ! | TTTGTGTTATGTTAATCAGA+AGG | - | chr8_4:1294577-1294596 | Msa1306360:exon | 25.0% |
| ! | TTAATCAGAAGGAAAAACAA+AGG | - | chr8_4:1294588-1294607 | Msa1306360:CDS | 25.0% |
| !! | AATGTTTTGTGATGAATGAT+AGG | - | chr8_4:1294816-1294835 | Msa1306360:intron | 25.0% |
| ! | ATAAACCTAATCATCTCTTT+AGG | + | chr8_4:1294959-1294978 | None:intergenic | 25.0% |
| !! | GTTTTTGTAACAATTTTTGC+AGG | - | chr8_4:1295131-1295150 | Msa1306360:intron | 25.0% |
| ! | TTAACATGTTTGAATAGCTT+AGG | - | chr8_4:1295246-1295265 | Msa1306360:intron | 25.0% |
| !! | GTATGATCCTTATTTATTCT+TGG | - | chr8_4:1295312-1295331 | Msa1306360:intron | 25.0% |
| ! | AACCATATTATACACAAAAC+AGG | + | chr8_4:1295374-1295393 | None:intergenic | 25.0% |
| !! | TGTTTTGTGTATAATATGGT+TGG | - | chr8_4:1295373-1295392 | Msa1306360:intron | 25.0% |
| !! | GTTTTGTGTATAATATGGTT+GGG | - | chr8_4:1295374-1295393 | Msa1306360:intron | 25.0% |
| ! | TCTAAACTACAATTGTATAG+GGG | + | chr8_4:1295653-1295672 | None:intergenic | 25.0% |
| ! | ATGGAAAACAAAGAGATTAT+CGG | + | chr8_4:1295891-1295910 | None:intergenic | 25.0% |
| !! | TGATTATTTAGAACACTTCT+AGG | - | chr8_4:1296152-1296171 | Msa1306360:intron | 25.0% |
| !! | ATGTAGTTTTTCCTATTACT+CGG | + | chr8_4:1296290-1296309 | None:intergenic | 25.0% |
| ! | TAATAGGAAAAACTACATCA+GGG | - | chr8_4:1296292-1296311 | Msa1306360:intron | 25.0% |
| !!! | GTTGACATTTTTTAACACAA+AGG | - | chr8_4:1296722-1296741 | Msa1306360:intron | 25.0% |
| !!! | ATTTTGGCCCTATATTATTA+AGG | + | chr8_4:1296822-1296841 | None:intergenic | 25.0% |
| ! | AGAAGATTAAATTTATGCTG+TGG | - | chr8_4:1296873-1296892 | Msa1306360:intron | 25.0% |
| ! | GAAGATTAAATTTATGCTGT+GGG | - | chr8_4:1296874-1296893 | Msa1306360:intron | 25.0% |
| !! | AAAATTTGTGATTTGTGTAC+AGG | - | chr8_4:1296989-1297008 | Msa1306360:intron | 25.0% |
| ! | AGTAATGCTTTATATACTCA+TGG | - | chr8_4:1297095-1297114 | Msa1306360:intron | 25.0% |
| ! | ATCTATACCTATGTATAAAG+GGG | - | chr8_4:1297138-1297157 | Msa1306360:intron | 25.0% |
| ! | TTAATATCCCCTTTATACAT+AGG | + | chr8_4:1297148-1297167 | None:intergenic | 25.0% |
| !! | TCTAATACTCACTCTTTTAT+TGG | - | chr8_4:1297350-1297369 | Msa1306360:intron | 25.0% |
| ! | ACTTTATATATAGGGATATG+AGG | + | chr8_4:1297526-1297545 | None:intergenic | 25.0% |
| !!! | ATAAAGTTGATACCAAGTTT+TGG | - | chr8_4:1297539-1297558 | Msa1306360:intron | 25.0% |
| ! | AAAAAAACTACACCAAAACT+TGG | + | chr8_4:1297554-1297573 | None:intergenic | 25.0% |
| ! | ACATTATATATAGGCATATC+AGG | - | chr8_4:1297638-1297657 | Msa1306360:CDS | 25.0% |
| !!! | CAGAGCTATTTTCAATTTTA+AGG | - | chr8_4:1297674-1297693 | Msa1306360:CDS | 25.0% |
| !! | CATTTCCAAACATTTTACTA+AGG | + | chr8_4:1297844-1297863 | None:intergenic | 25.0% |
| ! | CTTAGTAAAATGTTTGGAAA+TGG | - | chr8_4:1297842-1297861 | Msa1306360:intron | 25.0% |
| ! | TAAAATGTTTGGAAATGGTA+TGG | - | chr8_4:1297847-1297866 | Msa1306360:intron | 25.0% |
| ! | CATTGCATTCTTGTTAAATT+TGG | - | chr8_4:1297902-1297921 | Msa1306360:intron | 25.0% |
| ! | CTTAATTACTTAAACAACAG+TGG | - | chr8_4:1298142-1298161 | Msa1306360:CDS | 25.0% |
| ! | TGTTGTGACAACATATAATA+TGG | - | chr8_4:1298459-1298478 | Msa1306360:intron | 25.0% |
| !!! | ACATATAATATGGTTGCTTT+TGG | - | chr8_4:1298469-1298488 | Msa1306360:intron | 25.0% |
| !!! | CATATAATATGGTTGCTTTT+GGG | - | chr8_4:1298470-1298489 | Msa1306360:intron | 25.0% |
| !!! | ATATAATATGGTTGCTTTTG+GGG | - | chr8_4:1298471-1298490 | Msa1306360:intron | 25.0% |
| ! | AAGAAATAAGAAACAGAGAA+TGG | - | chr8_4:1298527-1298546 | Msa1306360:CDS | 25.0% |
| ! | AGAAATAAGAAACAGAGAAT+GGG | - | chr8_4:1298528-1298547 | Msa1306360:CDS | 25.0% |
| ! | GAGGTAATTGTTAAGATTTA+CGG | - | chr8_4:1298568-1298587 | Msa1306360:CDS | 25.0% |
| !! | AATGACTTTTCGAAACATAT+GGG | + | chr8_4:1298680-1298699 | None:intergenic | 25.0% |
| !! | TAATGACTTTTCGAAACATA+TGG | + | chr8_4:1298681-1298700 | None:intergenic | 25.0% |
| ! | AAAATTATAAGGAGCAATTG+TGG | - | chr8_4:1299049-1299068 | Msa1306360:intron | 25.0% |
| ! | ATTTGGATTCATCACATAAA+GGG | + | chr8_4:1299316-1299335 | None:intergenic | 25.0% |
| ! | TATTTGGATTCATCACATAA+AGG | + | chr8_4:1299317-1299336 | None:intergenic | 25.0% |
| !!! | AAATACTGTTTTTCTTTCCA+AGG | - | chr8_4:1299614-1299633 | Msa1306360:intron | 25.0% |
| !!! | AGTATTAACAAGAAGTACTA+AGG | + | chr8_4:1299837-1299856 | None:intergenic | 25.0% |
| ! | TAGTATTCAATATGTAGGAT+GGG | + | chr8_4:1300176-1300195 | None:intergenic | 25.0% |
| ! | TTAGTATTCAATATGTAGGA+TGG | + | chr8_4:1300177-1300196 | None:intergenic | 25.0% |
| !! | TAAATTTCATTTGTTTGCTG+TGG | - | chr8_4:1300194-1300213 | Msa1306360:intron | 25.0% |
| ! | AAATTCATGAATTAAATGGC+AGG | - | chr8_4:1300303-1300322 | Msa1306360:intron | 25.0% |
| ! | AATTCATGAATTAAATGGCA+GGG | - | chr8_4:1300304-1300323 | Msa1306360:intron | 25.0% |
| !! | GGCCATATATTATTGATTAT+TGG | - | chr8_4:1300427-1300446 | Msa1306360:intron | 25.0% |
| !!! | CAGCAATTTTTAATTGATCA+GGG | - | chr8_4:1300570-1300589 | Msa1306360:intron | 25.0% |
| ! | TTTGTACATTTACTTTACTG+TGG | - | chr8_4:1300675-1300694 | Msa1306360:intron | 25.0% |
| ! | TGACTCAAATGAAAACTATT+AGG | - | chr8_4:1300854-1300873 | Msa1306360:intron | 25.0% |
| ! | GTAAACAAACAAAATAGCTT+CGG | - | chr8_4:1300973-1300992 | Msa1306360:intron | 25.0% |
| ! | TAAACAAACACAAATAGCTT+CGG | - | chr8_4:1301050-1301069 | Msa1306360:intron | 25.0% |
| ! | CTAATTGAAATTGTTTCACT+AGG | + | chr8_4:1301197-1301216 | None:intergenic | 25.0% |
| !!! | AACTTCTTTTAAGTAGGTTA+TGG | + | chr8_4:1301239-1301258 | None:intergenic | 25.0% |
| ! | TGCTTTGTATATTTCAAGAA+GGG | + | chr8_4:1301262-1301281 | None:intergenic | 25.0% |
| ! | TTGCTTTGTATATTTCAAGA+AGG | + | chr8_4:1301263-1301282 | None:intergenic | 25.0% |
| ! | TGTTAGGAAAAAATAAGAAG+AGG | - | chr8_4:1301495-1301514 | Msa1306360:intron | 25.0% |
| !! | GTATCTTGGAAATATCATTT+TGG | - | chr8_4:1301620-1301639 | Msa1306360:intron | 25.0% |
| ! | AAATTTCAAATTCTCAAGCA+TGG | + | chr8_4:1301831-1301850 | None:intergenic | 25.0% |
| !! | CAAATCGTTTTCTAAATAAG+TGG | + | chr8_4:1302445-1302464 | None:intergenic | 25.0% |
| ! | CACTTATTTAGAAAACGATT+TGG | - | chr8_4:1302443-1302462 | Msa1306360:CDS | 25.0% |
| ! | TCTTATACTCAAATATATCC+TGG | - | chr8_4:1302627-1302646 | Msa1306360:intron | 25.0% |
| ! | CATATTTAGTCAAGTTCTAT+TGG | - | chr8_4:1302695-1302714 | Msa1306360:CDS | 25.0% |
| ! | AGTCTTATACATCGAAATCA+TGG | - | chr8_4:1294200-1294219 | Msa1306360:three_prime_UTR | 30.0% |
| GTCTTATACATCGAAATCAT+GGG | - | chr8_4:1294201-1294220 | Msa1306360:three_prime_UTR | 30.0% | |
| ! | GATGATGATGATGATACTTA+TGG | - | chr8_4:1294468-1294487 | Msa1306360:three_prime_UTR | 30.0% |
| TAGCAAATTAGAGTTGAAAC+CGG | - | chr8_4:1294615-1294634 | Msa1306360:CDS | 30.0% | |
| ! | TCATAAGCTTGTTTGTACAA+AGG | + | chr8_4:1294703-1294722 | None:intergenic | 30.0% |
| ! | AAATTTTTGTACCTGCAAAC+GGG | + | chr8_4:1294748-1294767 | None:intergenic | 30.0% |
| ! | CAAATTTTTGTACCTGCAAA+CGG | + | chr8_4:1294749-1294768 | None:intergenic | 30.0% |
| ATGATTCCACTGCAAATTAT+GGG | - | chr8_4:1294981-1295000 | Msa1306360:intron | 30.0% | |
| TAAGAAGAATCGTTACTATG+TGG | - | chr8_4:1295021-1295040 | Msa1306360:intron | 30.0% | |
| AATAATTACCCCACAAACAA+TGG | + | chr8_4:1295227-1295246 | None:intergenic | 30.0% | |
| ! | TGATCCTTATTTATTCTTGG+TGG | - | chr8_4:1295315-1295334 | Msa1306360:intron | 30.0% |
| ! | GATCCTTATTTATTCTTGGT+GGG | - | chr8_4:1295316-1295335 | Msa1306360:intron | 30.0% |
| AAACCCACCAAGAATAAATA+AGG | + | chr8_4:1295322-1295341 | None:intergenic | 30.0% | |
| CTACCTCTCTGTAATTTATT+GGG | - | chr8_4:1295348-1295367 | Msa1306360:intron | 30.0% | |
| !! | ATCTCTTAGGTTTTTGGATT+GGG | + | chr8_4:1295489-1295508 | None:intergenic | 30.0% |
| !! | AATCTCTTAGGTTTTTGGAT+TGG | + | chr8_4:1295490-1295509 | None:intergenic | 30.0% |
| AATACAACATGGAATCTCTT+AGG | + | chr8_4:1295502-1295521 | None:intergenic | 30.0% | |
| ACTAAAAAAGTTAGCGGTAA+AGG | + | chr8_4:1295549-1295568 | None:intergenic | 30.0% | |
| AACCACACTAAAAAAGTTAG+CGG | + | chr8_4:1295555-1295574 | None:intergenic | 30.0% | |
| ACTACCATGAATATTGTAGT+CGG | - | chr8_4:1295594-1295613 | Msa1306360:intron | 30.0% | |
| !!! | GGATCGTTGATTTAATTTTG+TGG | + | chr8_4:1295944-1295963 | None:intergenic | 30.0% |
| ! | ATTTTTCGCATGACAAATGA+TGG | + | chr8_4:1295965-1295984 | None:intergenic | 30.0% |
| TGCGAAAAATGATGTTTGAT+TGG | - | chr8_4:1295975-1295994 | Msa1306360:intron | 30.0% | |
| GCGAAAAATGATGTTTGATT+GGG | - | chr8_4:1295976-1295995 | Msa1306360:intron | 30.0% | |
| ! | ATCTGCATTTAAAAAGCACA+TGG | + | chr8_4:1296123-1296142 | None:intergenic | 30.0% |
| ! | AAGAGGAATTGCTATCATTT+TGG | + | chr8_4:1296215-1296234 | None:intergenic | 30.0% |
| ! | GTTTTCTTAAAAAAGGGAAG+AGG | + | chr8_4:1296232-1296251 | None:intergenic | 30.0% |
| TTGTAGAATTACCGAGTAAT+AGG | - | chr8_4:1296276-1296295 | Msa1306360:intron | 30.0% | |
| GTAATAGGAAAAACTACATC+AGG | - | chr8_4:1296291-1296310 | Msa1306360:intron | 30.0% | |
| AATAGGAAAAACTACATCAG+GGG | - | chr8_4:1296293-1296312 | Msa1306360:intron | 30.0% | |
| CAATGATCATGTTCACAAAT+TGG | + | chr8_4:1296451-1296470 | None:intergenic | 30.0% | |
| TGATGAGTTACATACTGTAA+TGG | - | chr8_4:1296579-1296598 | Msa1306360:intron | 30.0% | |
| AAATGGTTAAGTAAGACTTC+TGG | - | chr8_4:1296660-1296679 | Msa1306360:CDS | 30.0% | |
| !! | CCAAACTTCATTTTTCATCT+AGG | + | chr8_4:1296693-1296712 | None:intergenic | 30.0% |
| CCTAGATGAAAAATGAAGTT+TGG | - | chr8_4:1296690-1296709 | Msa1306360:CDS | 30.0% | |
| ! | GTTTATCCTTTTTGTCAAGT+TGG | + | chr8_4:1296749-1296768 | None:intergenic | 30.0% |
| ! | GTGAAACTCAAGGAATATTT+TGG | + | chr8_4:1296838-1296857 | None:intergenic | 30.0% |
| TGTGATTTCTGATAACAATC+TGG | + | chr8_4:1296929-1296948 | None:intergenic | 30.0% | |
| ! | ATGGGATAATTTAAGGCATT+TGG | + | chr8_4:1297041-1297060 | None:intergenic | 30.0% |
| AAAATTGAACCCACACAAAA+TGG | - | chr8_4:1297424-1297443 | Msa1306360:CDS | 30.0% | |
| AAGAGCCTTAGTAAAATGTT+TGG | - | chr8_4:1297836-1297855 | Msa1306360:intron | 30.0% | |
| TAGAACTTTATGTGCTAGTA+CGG | - | chr8_4:1298039-1298058 | Msa1306360:intron | 30.0% | |
| AATATTATGTTAACGGGGTT+TGG | - | chr8_4:1298076-1298095 | Msa1306360:CDS | 30.0% | |
| !!! | AAAGACAGCTCTTTTTTATC+CGG | + | chr8_4:1298309-1298328 | None:intergenic | 30.0% |
| AAAAAAGAGCTGTCTTTGTT+TGG | - | chr8_4:1298312-1298331 | Msa1306360:intron | 30.0% | |
| AACGACATATTTGTTCATCT+CGG | + | chr8_4:1298396-1298415 | None:intergenic | 30.0% | |
| !!! | TATAATATGGTTGCTTTTGG+GGG | - | chr8_4:1298472-1298491 | Msa1306360:intron | 30.0% |
| GAAATAAGAAACAGAGAATG+GGG | - | chr8_4:1298529-1298548 | Msa1306360:CDS | 30.0% | |
| AAGAACAGAAAGAAGATTTC+AGG | + | chr8_4:1298614-1298633 | None:intergenic | 30.0% | |
| AATTGGTTGGATCTTGTAAA+AGG | - | chr8_4:1298892-1298911 | Msa1306360:intron | 30.0% | |
| ! | GCGAAAAATTCTTTTGTCAT+TGG | + | chr8_4:1298958-1298977 | None:intergenic | 30.0% |
| ATACATTGCAGTTTCTGTTT+AGG | - | chr8_4:1299094-1299113 | Msa1306360:intron | 30.0% | |
| TTCTCATAAATTACCACGAA+AGG | - | chr8_4:1299355-1299374 | Msa1306360:intron | 30.0% | |
| TCTCATAAATTACCACGAAA+GGG | - | chr8_4:1299356-1299375 | Msa1306360:intron | 30.0% | |
| GAATATGTTAAAGCACATAC+TGG | - | chr8_4:1299701-1299720 | Msa1306360:intron | 30.0% | |
| ATATCCTTACGAGTTTCATT+AGG | - | chr8_4:1299767-1299786 | Msa1306360:intron | 30.0% | |
| AGAATAAAAGAAACGATGCA+AGG | + | chr8_4:1299931-1299950 | None:intergenic | 30.0% | |
| TGAATTATCACATTTGCTTC+AGG | + | chr8_4:1299981-1300000 | None:intergenic | 30.0% | |
| TATTTCCCTGTTGTATGTTA+TGG | - | chr8_4:1300102-1300121 | Msa1306360:intron | 30.0% | |
| AGTTACCATAACATACAACA+GGG | + | chr8_4:1300110-1300129 | None:intergenic | 30.0% | |
| AAGTTACCATAACATACAAC+AGG | + | chr8_4:1300111-1300130 | None:intergenic | 30.0% | |
| CATGAAATAAATGTGTACCT+GGG | + | chr8_4:1300404-1300423 | None:intergenic | 30.0% | |
| ACATGAAATAAATGTGTACC+TGG | + | chr8_4:1300405-1300424 | None:intergenic | 30.0% | |
| GTACACATTTATTTCATGTC+AGG | - | chr8_4:1300406-1300425 | Msa1306360:intron | 30.0% | |
| ACTATCATTCAAGGAGTTTA+TGG | - | chr8_4:1300480-1300499 | Msa1306360:intron | 30.0% | |
| AGATGTATTACTCAACTAAG+AGG | - | chr8_4:1300547-1300566 | Msa1306360:intron | 30.0% | |
| !! | GCAGCAATTTTTAATTGATC+AGG | - | chr8_4:1300569-1300588 | Msa1306360:intron | 30.0% |
| AAATTACCACAAGTGCAATA+GGG | + | chr8_4:1300636-1300655 | None:intergenic | 30.0% | |
| ACAAATTCATGTGAATCTTG+AGG | + | chr8_4:1300660-1300679 | None:intergenic | 30.0% | |
| AAGTTGTCAATGTGTTATCT+TGG | - | chr8_4:1300703-1300722 | Msa1306360:intron | 30.0% | |
| AGTTGTCAATGTGTTATCTT+GGG | - | chr8_4:1300704-1300723 | Msa1306360:intron | 30.0% | |
| ! | AAAAGCTTTTACTCATTCAC+AGG | + | chr8_4:1301303-1301322 | None:intergenic | 30.0% |
| !! | GTAAAAGCTTTTATTTGGTG+CGG | - | chr8_4:1301311-1301330 | Msa1306360:CDS | 30.0% |
| ! | TACTATAACCAAAGTACTCT+AGG | - | chr8_4:1301339-1301358 | Msa1306360:CDS | 30.0% |
| !! | ATTAGGTTTGTTGAAGGAAA+TGG | - | chr8_4:1301367-1301386 | Msa1306360:intron | 30.0% |
| AACATAAATTCCTCACAACA+TGG | + | chr8_4:1301479-1301498 | None:intergenic | 30.0% | |
| TGTTGTGAGGAATTTATGTT+AGG | - | chr8_4:1301479-1301498 | Msa1306360:intron | 30.0% | |
| GGAAAAAATAAGAAGAGGAA+TGG | - | chr8_4:1301500-1301519 | Msa1306360:intron | 30.0% | |
| ! | ATATTGAGAATTTGAGACTG+AGG | - | chr8_4:1301583-1301602 | Msa1306360:intron | 30.0% |
| ! | TATTGAGAATTTGAGACTGA+GGG | - | chr8_4:1301584-1301603 | Msa1306360:intron | 30.0% |
| !! | TGGAAATATCATTTTGGTGT+TGG | - | chr8_4:1301626-1301645 | Msa1306360:intron | 30.0% |
| !!! | TATCATTTTGGTGTTGGTTA+TGG | - | chr8_4:1301632-1301651 | Msa1306360:intron | 30.0% |
| !!! | ATCATTTTGGTGTTGGTTAT+GGG | - | chr8_4:1301633-1301652 | Msa1306360:intron | 30.0% |
| AGTAGCAATTAAAAGACAGA+AGG | + | chr8_4:1301718-1301737 | None:intergenic | 30.0% | |
| AGTTGTCTTCATGCAATATT+TGG | + | chr8_4:1301755-1301774 | None:intergenic | 30.0% | |
| AACTCAATTCCAATTCAACA+GGG | + | chr8_4:1302023-1302042 | None:intergenic | 30.0% | |
| ATGACAATAATCAAGAATGC+AGG | - | chr8_4:1302535-1302554 | Msa1306360:intron | 30.0% | |
| CAAGAGAAAGATTGTTATGA+TGG | - | chr8_4:1302773-1302792 | Msa1306360:intron | 30.0% | |
| !! | ATATTTGCAGGTGCTGAAAA+AGG | - | chr8_4:1294305-1294324 | Msa1306360:three_prime_UTR | 35.0% |
| GAAACTAACGAATTTAGCAG+CGG | + | chr8_4:1294354-1294373 | None:intergenic | 35.0% | |
| AGAAAGTCTCAAGGAAAATG+CGG | + | chr8_4:1294678-1294697 | None:intergenic | 35.0% | |
| ! | AATCATCTCTTTAGGAAGCT+TGG | + | chr8_4:1294951-1294970 | None:intergenic | 35.0% |
| AGCTTCCTAAAGAGATGATT+AGG | - | chr8_4:1294951-1294970 | Msa1306360:CDS | 35.0% | |
| ! | CATAATTTGCAGTGGAATCA+TGG | + | chr8_4:1294982-1295001 | None:intergenic | 35.0% |
| CATGATTCCACTGCAAATTA+TGG | - | chr8_4:1294980-1294999 | Msa1306360:intron | 35.0% | |
| TAACATCATTTACACACCTC+TGG | + | chr8_4:1295058-1295077 | None:intergenic | 35.0% | |
| !! | CTACTTTTACCAATCATTGC+TGG | - | chr8_4:1295094-1295113 | Msa1306360:CDS | 35.0% |
| GAAATCTTACCAGCAATGAT+TGG | + | chr8_4:1295106-1295125 | None:intergenic | 35.0% | |
| ATTGCTGGTAAGATTTCATG+TGG | - | chr8_4:1295109-1295128 | Msa1306360:CDS | 35.0% | |
| !! | AGGTATTGAAAACATTGCTC+AGG | - | chr8_4:1295151-1295170 | Msa1306360:intron | 35.0% |
| ! | GGTATTGAAAACATTGCTCA+GGG | - | chr8_4:1295152-1295171 | Msa1306360:intron | 35.0% |
| TGATCACATCCATTGTTTGT+GGG | - | chr8_4:1295215-1295234 | Msa1306360:intron | 35.0% | |
| TAAATTACAGAGAGGTAGCA+CGG | + | chr8_4:1295346-1295365 | None:intergenic | 35.0% | |
| GCTACCTCTCTGTAATTTAT+TGG | - | chr8_4:1295347-1295366 | Msa1306360:intron | 35.0% | |
| ! | GGCCTGTTTTGTGTATAATA+TGG | - | chr8_4:1295369-1295388 | Msa1306360:intron | 35.0% |
| ! | CATGGAATCTCTTAGGTTTT+TGG | + | chr8_4:1295495-1295514 | None:intergenic | 35.0% |
| !!! | TACCGCTAACTTTTTTAGTG+TGG | - | chr8_4:1295550-1295569 | Msa1306360:intron | 35.0% |
| AAGACCGACTACAATATTCA+TGG | + | chr8_4:1295601-1295620 | None:intergenic | 35.0% | |
| AACTACAATTGTATAGGGGA+TGG | + | chr8_4:1295649-1295668 | None:intergenic | 35.0% | |
| CCTAAACAAAAACAGCAACA+GGG | + | chr8_4:1295678-1295697 | None:intergenic | 35.0% | |
| !!! | CCTGTTGCTGTTTTTGTTTA+GGG | - | chr8_4:1295676-1295695 | Msa1306360:intron | 35.0% |
| !! | GTTTTTGTTTAGGGTACTCA+TGG | - | chr8_4:1295685-1295704 | Msa1306360:intron | 35.0% |
| ! | TTTACAATCAGCAAAGCACT+AGG | - | chr8_4:1295715-1295734 | Msa1306360:intron | 35.0% |
| CATGTCTCAGGAAAAGAAAA+TGG | - | chr8_4:1296004-1296023 | Msa1306360:intron | 35.0% | |
| TGTAATGATGCATTCTTGTC+TGG | - | chr8_4:1296077-1296096 | Msa1306360:intron | 35.0% | |
| GTAATGATGCATTCTTGTCT+GGG | - | chr8_4:1296078-1296097 | Msa1306360:intron | 35.0% | |
| CATAGATGACAGTTGAAACA+GGG | + | chr8_4:1296184-1296203 | None:intergenic | 35.0% | |
| TCATAGATGACAGTTGAAAC+AGG | + | chr8_4:1296185-1296204 | None:intergenic | 35.0% | |
| AAAACAAATTCAGCAGTGCA+TGG | - | chr8_4:1296247-1296266 | Msa1306360:intron | 35.0% | |
| ATAGGAAAAACTACATCAGG+GGG | - | chr8_4:1296294-1296313 | Msa1306360:intron | 35.0% | |
| GACGCGAAAAAAGTAAACAA+AGG | + | chr8_4:1296355-1296374 | None:intergenic | 35.0% | |
| !! | AGTGGACTAAGAATGAAAGT+AGG | + | chr8_4:1296421-1296440 | None:intergenic | 35.0% |
| ! | TCACAAATTGGTAGCAAAAG+TGG | + | chr8_4:1296439-1296458 | None:intergenic | 35.0% |
| CACCAAAATTAGACTCTTGT+TGG | - | chr8_4:1296505-1296524 | Msa1306360:intron | 35.0% | |
| ! | TGCCAACAAGAGTCTAATTT+TGG | + | chr8_4:1296510-1296529 | None:intergenic | 35.0% |
| AAAGGACCAACTTGACAAAA+AGG | - | chr8_4:1296740-1296759 | Msa1306360:intron | 35.0% | |
| !!! | GTTTTTTGTCGTGAAACTCA+AGG | + | chr8_4:1296848-1296867 | None:intergenic | 35.0% |
| AGAAATCACACTAGAGTAGT+TGG | - | chr8_4:1296939-1296958 | Msa1306360:intron | 35.0% | |
| TGCCTTAAATTATCCCATGT+TGG | - | chr8_4:1297043-1297062 | Msa1306360:CDS | 35.0% | |
| CTCCAACATGGGATAATTTA+AGG | + | chr8_4:1297048-1297067 | None:intergenic | 35.0% | |
| CTTAAATTATCCCATGTTGG+AGG | - | chr8_4:1297046-1297065 | Msa1306360:CDS | 35.0% | |
| ! | TCATGGTGTTGAAATCTTTG+AGG | - | chr8_4:1297112-1297131 | Msa1306360:intron | 35.0% |
| ! | TTGTGTGGGTTCAATTTTCA+AGG | + | chr8_4:1297422-1297441 | None:intergenic | 35.0% |
| TCTAACACTCACTCTCTTAT+TGG | + | chr8_4:1297471-1297490 | None:intergenic | 35.0% | |
| AATAAGAGAGTGAGTGTTAG+AGG | - | chr8_4:1297470-1297489 | Msa1306360:CDS | 35.0% | |
| ATAAGAGAGTGAGTGTTAGA+GGG | - | chr8_4:1297471-1297490 | Msa1306360:CDS | 35.0% | |
| CTTGTTAAATTTGGAGAACC+CGG | - | chr8_4:1297911-1297930 | Msa1306360:intron | 35.0% | |
| TGTTGGAACAATACTGACAT+GGG | + | chr8_4:1297983-1298002 | None:intergenic | 35.0% | |
| TTGTTGGAACAATACTGACA+TGG | + | chr8_4:1297984-1298003 | None:intergenic | 35.0% | |
| ACAAGGTAGAACTATGATAC+CGG | + | chr8_4:1298248-1298267 | None:intergenic | 35.0% | |
| !!! | AAGACAGCTCTTTTTTATCC+GGG | + | chr8_4:1298308-1298327 | None:intergenic | 35.0% |
| ! | GGGCTTTTCAGTTTAAACTA+TGG | - | chr8_4:1298362-1298381 | Msa1306360:CDS | 35.0% |
| AAAGAAGATTTCAGGCAAGA+AGG | + | chr8_4:1298606-1298625 | None:intergenic | 35.0% | |
| ACTAAATCTCACTGCAAACT+TGG | - | chr8_4:1298706-1298725 | Msa1306360:CDS | 35.0% | |
| CTAAATCTCACTGCAAACTT+GGG | - | chr8_4:1298707-1298726 | Msa1306360:CDS | 35.0% | |
| ATTATTTCACTCAGCAGAAG+AGG | + | chr8_4:1298787-1298806 | None:intergenic | 35.0% | |
| ACAGATCTGAACTTCCTAAT+TGG | - | chr8_4:1298850-1298869 | Msa1306360:intron | 35.0% | |
| CAATTTGCCTCATACAGTTT+GGG | + | chr8_4:1298877-1298896 | None:intergenic | 35.0% | |
| AAGATTTACATAGTTCCCAG+AGG | + | chr8_4:1299024-1299043 | None:intergenic | 35.0% | |
| ACAGAAACTGCAATGTATCA+TGG | + | chr8_4:1299092-1299111 | None:intergenic | 35.0% | |
| TGAATTCAAGCAAGTGAACT+AGG | + | chr8_4:1299184-1299203 | None:intergenic | 35.0% | |
| TTGTTGATCATTACATGTGC+AGG | - | chr8_4:1299290-1299309 | Msa1306360:intron | 35.0% | |
| TCACATGCTCGGAATTTATT+TGG | + | chr8_4:1299333-1299352 | None:intergenic | 35.0% | |
| TTATGAGAAACTCACATGCT+CGG | + | chr8_4:1299344-1299363 | None:intergenic | 35.0% | |
| CTTCGCAAACCAATGATATA+TGG | - | chr8_4:1299444-1299463 | Msa1306360:intron | 35.0% | |
| CTTGTAGCACCATATATCAT+TGG | + | chr8_4:1299456-1299475 | None:intergenic | 35.0% | |
| !! | CAATGATATATGGTGCTACA+AGG | - | chr8_4:1299454-1299473 | Msa1306360:intron | 35.0% |
| !!! | GTCTTTTGAAGCTGTGTTTT+GGG | - | chr8_4:1299497-1299516 | Msa1306360:intron | 35.0% |
| !!! | TCTTTTGAAGCTGTGTTTTG+GGG | - | chr8_4:1299498-1299517 | Msa1306360:intron | 35.0% |
| ! | GAATTTTTGTCCTCTCAACA+TGG | + | chr8_4:1299566-1299585 | None:intergenic | 35.0% |
| TGAGAGGACAAAAATTCTAC+AGG | - | chr8_4:1299569-1299588 | Msa1306360:intron | 35.0% | |
| AACAGTATTTACGTCTTTGC+TGG | + | chr8_4:1299604-1299623 | None:intergenic | 35.0% | |
| AAAAACAGGAACAGATACCT+TGG | + | chr8_4:1299634-1299653 | None:intergenic | 35.0% | |
| CTAACCTAATGAAACTCGTA+AGG | + | chr8_4:1299774-1299793 | None:intergenic | 35.0% | |
| ! | GCATCGTTTCTTTTATTCTC+AGG | - | chr8_4:1299932-1299951 | Msa1306360:intron | 35.0% |
| ! | CGTTTCTTTTATTCTCAGGT+TGG | - | chr8_4:1299936-1299955 | Msa1306360:intron | 35.0% |
| TTCAATATGTAGGATGGGTA+TGG | + | chr8_4:1300171-1300190 | None:intergenic | 35.0% | |
| !! | ATTTGTTTGCTGTGGAAAGT+GGG | - | chr8_4:1300202-1300221 | Msa1306360:intron | 35.0% |
| ATAAATGTGTACCTGGGTAT+CGG | + | chr8_4:1300398-1300417 | None:intergenic | 35.0% | |
| CAAATTACCACAAGTGCAAT+AGG | + | chr8_4:1300637-1300656 | None:intergenic | 35.0% | |
| GATAACACATTGACAACTTC+AGG | + | chr8_4:1300702-1300721 | None:intergenic | 35.0% | |
| GTTGTCAATGTGTTATCTTG+GGG | - | chr8_4:1300705-1300724 | Msa1306360:intron | 35.0% | |
| TTGGGGCAAGAATGATTATT+TGG | - | chr8_4:1300722-1300741 | Msa1306360:intron | 35.0% | |
| TGGGGCAAGAATGATTATTT+GGG | - | chr8_4:1300723-1300742 | Msa1306360:intron | 35.0% | |
| !! | GAAGGGAACTTCTTTTAAGT+AGG | + | chr8_4:1301245-1301264 | None:intergenic | 35.0% |
| ! | AATGTCTTCCTAGAGTACTT+TGG | + | chr8_4:1301350-1301369 | None:intergenic | 35.0% |
| ! | AAGTACTCTAGGAAGACATT+AGG | - | chr8_4:1301350-1301369 | Msa1306360:intron | 35.0% |
| !! | GAAGACATTAGGTTTGTTGA+AGG | - | chr8_4:1301361-1301380 | Msa1306360:intron | 35.0% |
| TTTAAGCCTGCAATCTCATT+TGG | + | chr8_4:1301427-1301446 | None:intergenic | 35.0% | |
| AAATGAGATTGCAGGCTTAA+AGG | - | chr8_4:1301426-1301445 | Msa1306360:intron | 35.0% | |
| AATGAGATTGCAGGCTTAAA+GGG | - | chr8_4:1301427-1301446 | Msa1306360:intron | 35.0% | |
| ACAGAAGGATGAAGATTGAA+TGG | + | chr8_4:1301703-1301722 | None:intergenic | 35.0% | |
| TCTTCATGCAATATTTGGCA+CGG | + | chr8_4:1301750-1301769 | None:intergenic | 35.0% | |
| CAACTCAATTCCAATTCAAC+AGG | + | chr8_4:1302024-1302043 | None:intergenic | 35.0% | |
| ! | GTTGTTGATTGAGAACTAAC+TGG | - | chr8_4:1302040-1302059 | Msa1306360:CDS | 35.0% |
| AAACCCTCGTGTGATTAAAA+AGG | - | chr8_4:1302474-1302493 | Msa1306360:intron | 35.0% | |
| ! | GTTCCTTTTTAATCACACGA+GGG | + | chr8_4:1302480-1302499 | None:intergenic | 35.0% |
| GTGATTAAAAAGGAACCATG+CGG | - | chr8_4:1302484-1302503 | Msa1306360:intron | 35.0% | |
| TCTCTTGTACTGTATATTCG+TGG | + | chr8_4:1302760-1302779 | None:intergenic | 35.0% | |
| TACATCGAAATCATGGGACA+CGG | - | chr8_4:1294207-1294226 | Msa1306360:three_prime_UTR | 40.0% | |
| !!! | CCTTTTTTGGAATCTTCCTG+TGG | + | chr8_4:1294441-1294460 | None:intergenic | 40.0% |
| CCACAGGAAGATTCCAAAAA+AGG | - | chr8_4:1294438-1294457 | Msa1306360:three_prime_UTR | 40.0% | |
| !!! | ATCATCGGCGAATCCTTTTT+TGG | + | chr8_4:1294454-1294473 | None:intergenic | 40.0% |
| ATCACACAAATCGTCCTCTT+TGG | - | chr8_4:1294638-1294657 | Msa1306360:CDS | 40.0% | |
| TCACACAAATCGTCCTCTTT+GGG | - | chr8_4:1294639-1294658 | Msa1306360:CDS | 40.0% | |
| ACAAAGGTGAGAAAGTCTCA+AGG | + | chr8_4:1294687-1294706 | None:intergenic | 40.0% | |
| ! | GACTTTCCCATAATTTGCAG+TGG | + | chr8_4:1294990-1295009 | None:intergenic | 40.0% |
| ! | CATTTACACACCTCTGGAAA+CGG | + | chr8_4:1295052-1295071 | None:intergenic | 40.0% |
| GTGATCACATCCATTGTTTG+TGG | - | chr8_4:1295214-1295233 | Msa1306360:intron | 40.0% | |
| GATCACATCCATTGTTTGTG+GGG | - | chr8_4:1295216-1295235 | Msa1306360:intron | 40.0% | |
| AGGCCCAATAAATTACAGAG+AGG | + | chr8_4:1295354-1295373 | None:intergenic | 40.0% | |
| AGTACGAAAACCTATCCAAC+AGG | + | chr8_4:1295403-1295422 | None:intergenic | 40.0% | |
| GATTCCATGTTGTATTCGAC+TGG | - | chr8_4:1295506-1295525 | Msa1306360:intron | 40.0% | |
| GAAACCAGTCGAATACAACA+TGG | + | chr8_4:1295513-1295532 | None:intergenic | 40.0% | |
| !! | GTATTCGACTGGTTTCTCAT+AGG | - | chr8_4:1295517-1295536 | Msa1306360:intron | 40.0% |
| TTGCAGTTTATACACCCTCT+TGG | - | chr8_4:1295619-1295638 | Msa1306360:intron | 40.0% | |
| TGCAGTTTATACACCCTCTT+GGG | - | chr8_4:1295620-1295639 | Msa1306360:intron | 40.0% | |
| !!! | CCCTGTTGCTGTTTTTGTTT+AGG | - | chr8_4:1295675-1295694 | Msa1306360:intron | 40.0% |
| CCCTAAACAAAAACAGCAAC+AGG | + | chr8_4:1295679-1295698 | None:intergenic | 40.0% | |
| ! | AAAGCACTAGGTGAGATTGA+AGG | - | chr8_4:1295727-1295746 | Msa1306360:intron | 40.0% |
| GCTAAATCAAGCAGAAGTAG+CGG | - | chr8_4:1295765-1295784 | Msa1306360:intron | 40.0% | |
| ATTCGAAATTGATCCTGCTC+AGG | - | chr8_4:1295816-1295835 | Msa1306360:intron | 40.0% | |
| CAAATCTAGATTACCTGAGC+AGG | + | chr8_4:1295832-1295851 | None:intergenic | 40.0% | |
| TAGGAAAAACTACATCAGGG+GGG | - | chr8_4:1296295-1296314 | Msa1306360:intron | 40.0% | |
| AAGTCATACTCCTCCAACAT+GGG | + | chr8_4:1297059-1297078 | None:intergenic | 40.0% | |
| ! | GTGTTGCTAGCATTACTCAT+AGG | + | chr8_4:1297328-1297347 | None:intergenic | 40.0% |
| ATTGAACCCACACAAAATGG+TGG | - | chr8_4:1297427-1297446 | Msa1306360:CDS | 40.0% | |
| TTGAACCCACACAAAATGGT+GGG | - | chr8_4:1297428-1297447 | Msa1306360:CDS | 40.0% | |
| ! | TATGTCCCACCATTTTGTGT+GGG | + | chr8_4:1297436-1297455 | None:intergenic | 40.0% |
| CTAAGGCTCTTCTCTTGATA+TGG | + | chr8_4:1297827-1297846 | None:intergenic | 40.0% | |
| ATGTTTGGAAATGGTATGGC+TGG | - | chr8_4:1297851-1297870 | Msa1306360:intron | 40.0% | |
| ! | GGATTAGCATAACTTAGTGC+TGG | - | chr8_4:1298097-1298116 | Msa1306360:CDS | 40.0% |
| ! | GGTATCATAGTTCTACCTTG+TGG | - | chr8_4:1298247-1298266 | Msa1306360:intron | 40.0% |
| CTGTTCTTATCCATCGTACA+TGG | - | chr8_4:1298626-1298645 | Msa1306360:CDS | 40.0% | |
| GTTTATCATGCCATGTACGA+TGG | + | chr8_4:1298639-1298658 | None:intergenic | 40.0% | |
| TCGTACATGGCATGATAAAC+AGG | - | chr8_4:1298639-1298658 | Msa1306360:CDS | 40.0% | |
| ! | ACTTTTCGAAACATATGGGC+AGG | + | chr8_4:1298676-1298695 | None:intergenic | 40.0% |
| ! | CATACAGTTTGGGACCAATT+AGG | + | chr8_4:1298867-1298886 | None:intergenic | 40.0% |
| AATTGGTCCCAAACTGTATG+AGG | - | chr8_4:1298867-1298886 | Msa1306360:intron | 40.0% | |
| CCAATTTGCCTCATACAGTT+TGG | + | chr8_4:1298878-1298897 | None:intergenic | 40.0% | |
| CCAAACTGTATGAGGCAAAT+TGG | - | chr8_4:1298875-1298894 | Msa1306360:intron | 40.0% | |
| ACTGTATGAGGCAAATTGGT+TGG | - | chr8_4:1298879-1298898 | Msa1306360:intron | 40.0% | |
| TGGTTGGATCTTGTAAAAGG+TGG | - | chr8_4:1298895-1298914 | Msa1306360:intron | 40.0% | |
| ATGTACAGTGTGCTGAAGTA+TGG | - | chr8_4:1298929-1298948 | Msa1306360:intron | 40.0% | |
| !! | CATTGGTTTGCGAAGTTTCA+TGG | + | chr8_4:1299439-1299458 | None:intergenic | 40.0% |
| !!! | CGTCTTTTGAAGCTGTGTTT+TGG | - | chr8_4:1299496-1299515 | Msa1306360:intron | 40.0% |
| TCTCAACATGGCTGCAAATA+AGG | + | chr8_4:1299554-1299573 | None:intergenic | 40.0% | |
| TTATTTGCAGCCATGTTGAG+AGG | - | chr8_4:1299553-1299572 | Msa1306360:intron | 40.0% | |
| !! | ACTGGTCTAGCATTTTGTTG+AGG | - | chr8_4:1299719-1299738 | Msa1306360:intron | 40.0% |
| ATTCAGATCTCTTCACATGC+TGG | - | chr8_4:1299996-1300015 | Msa1306360:CDS | 40.0% | |
| !! | CATTTGTTTGCTGTGGAAAG+TGG | - | chr8_4:1300201-1300220 | Msa1306360:intron | 40.0% |
| ! | TCAATAATGCCTTTTGCCAG+TGG | - | chr8_4:1300264-1300283 | Msa1306360:intron | 40.0% |
| ! | CAATAATGCCTTTTGCCAGT+GGG | - | chr8_4:1300265-1300284 | Msa1306360:intron | 40.0% |
| CGTTTACTGCTTTCGTTTAC+AGG | - | chr8_4:1300524-1300543 | Msa1306360:intron | 40.0% | |
| TGATCAGGGTTACAGCTTTA+AGG | - | chr8_4:1300584-1300603 | Msa1306360:intron | 40.0% | |
| AATTCCTCACAACATGGTCT+TGG | + | chr8_4:1301473-1301492 | None:intergenic | 40.0% | |
| GAATGGAAAGAATGCTGATG+CGG | - | chr8_4:1301517-1301536 | Msa1306360:intron | 40.0% | |
| CAGAGAACATTGTTCTCTGT+AGG | - | chr8_4:1301656-1301675 | Msa1306360:intron | 40.0% | |
| CTTCATGCAATATTTGGCAC+GGG | + | chr8_4:1301749-1301768 | None:intergenic | 40.0% | |
| AAAAAAACCTGCTCGAACTG+TGG | - | chr8_4:1301797-1301816 | Msa1306360:intron | 40.0% | |
| AAATTCTCAAGCATGGCATC+GGG | + | chr8_4:1301824-1301843 | None:intergenic | 40.0% | |
| CAAATTCTCAAGCATGGCAT+CGG | + | chr8_4:1301825-1301844 | None:intergenic | 40.0% | |
| ! | AGACCTTGGCAAGATAGTTT+TGG | + | chr8_4:1301864-1301883 | None:intergenic | 40.0% |
| GCATGTATAGATTGAGACCT+TGG | + | chr8_4:1301878-1301897 | None:intergenic | 40.0% | |
| TCATCATCTCGATGATCAAC+TGG | - | chr8_4:1301969-1301988 | Msa1306360:intron | 40.0% | |
| CAATTCAACAGGGATACAGA+TGG | + | chr8_4:1302013-1302032 | None:intergenic | 40.0% | |
| CATCTGTATCCCTGTTGAAT+TGG | - | chr8_4:1302011-1302030 | Msa1306360:CDS | 40.0% | |
| !! | ACCTATCAGGTATTGAATGC+TGG | - | chr8_4:1302068-1302087 | Msa1306360:CDS | 40.0% |
| ACCAGCATTCAATACCTGAT+AGG | + | chr8_4:1302072-1302091 | None:intergenic | 40.0% | |
| TGCAAAAGGGATGGTTTATG+TGG | - | chr8_4:1302190-1302209 | Msa1306360:CDS | 40.0% | |
| TGTCTCTTTGCTGGATCTTT+CGG | + | chr8_4:1302422-1302441 | None:intergenic | 40.0% | |
| AATAAGTGGTGTCTCTTTGC+TGG | + | chr8_4:1302431-1302450 | None:intergenic | 40.0% | |
| ! | GGTTCCTTTTTAATCACACG+AGG | + | chr8_4:1302481-1302500 | None:intergenic | 40.0% |
| ATTAAAAAGGAACCATGCGG+TGG | - | chr8_4:1302487-1302506 | Msa1306360:intron | 40.0% | |
| AATCAAACATCAACCCTGTG+TGG | + | chr8_4:1302661-1302680 | None:intergenic | 40.0% | |
| !!! | GCGGCTTTGAGCTTTTTGAA+GGG | + | chr8_4:1294335-1294354 | None:intergenic | 45.0% |
| !!! | AGCGGCTTTGAGCTTTTTGA+AGG | + | chr8_4:1294336-1294355 | None:intergenic | 45.0% |
| GTCGTCATCGTAAGCATCAT+CGG | + | chr8_4:1294496-1294515 | None:intergenic | 45.0% | |
| GATGATGCTTACGATGACGA+CGG | - | chr8_4:1294495-1294514 | Msa1306360:three_prime_UTR | 45.0% | |
| AGAGGACGATTTGTGTGATC+CGG | + | chr8_4:1294637-1294656 | None:intergenic | 45.0% | |
| !! | TTGTATTCGTGCATCGACTC+TGG | + | chr8_4:1294842-1294861 | None:intergenic | 45.0% |
| ATGATGCTATATCGCGAGCA+AGG | - | chr8_4:1295175-1295194 | Msa1306360:intron | 45.0% | |
| ACTGTCTGTCTCTATACCCA+TGG | - | chr8_4:1295272-1295291 | Msa1306360:intron | 45.0% | |
| ! | TCTATACCCATGGTGATGAG+TGG | - | chr8_4:1295282-1295301 | Msa1306360:intron | 45.0% |
| AATATGGTTGGGTGACCTGT+TGG | - | chr8_4:1295385-1295404 | Msa1306360:intron | 45.0% | |
| !!! | CTCTTACAGGCTGGTTTTGT+AGG | + | chr8_4:1295457-1295476 | None:intergenic | 45.0% |
| ACAAAACCAGCCTGTAAGAG+TGG | - | chr8_4:1295457-1295476 | Msa1306360:intron | 45.0% | |
| CAAAACCAGCCTGTAAGAGT+GGG | - | chr8_4:1295458-1295477 | Msa1306360:intron | 45.0% | |
| ! | GTTTAGGGTACTCATGGAGA+TGG | - | chr8_4:1295691-1295710 | Msa1306360:intron | 45.0% |
| AGGAAAAACTACATCAGGGG+GGG | - | chr8_4:1296296-1296315 | Msa1306360:intron | 45.0% | |
| GAAGTCATACTCCTCCAACA+TGG | + | chr8_4:1297060-1297079 | None:intergenic | 45.0% | |
| ! | GTATGTCCCACCATTTTGTG+TGG | + | chr8_4:1297437-1297456 | None:intergenic | 45.0% |
| TTAGTTCCATCTCGAGGTCT+GGG | + | chr8_4:1297784-1297803 | None:intergenic | 45.0% | |
| ! | TTTAGTTCCATCTCGAGGTC+TGG | + | chr8_4:1297785-1297804 | None:intergenic | 45.0% |
| ! | CTTTTATCATCTGCCCCTTC+AGG | - | chr8_4:1298211-1298230 | Msa1306360:CDS | 45.0% |
| ! | ATAGTTCTACCTTGTGGTGC+CGG | - | chr8_4:1298253-1298272 | Msa1306360:intron | 45.0% |
| AACACCAACTAGGGACTTTC+CGG | + | chr8_4:1298275-1298294 | None:intergenic | 45.0% | |
| AGCTGCTGAAACACCAACTA+GGG | + | chr8_4:1298284-1298303 | None:intergenic | 45.0% | |
| AAGCTGCTGAAACACCAACT+AGG | + | chr8_4:1298285-1298304 | None:intergenic | 45.0% | |
| !!! | TGGTTGCTTTTGGGGGTAAA+CGG | - | chr8_4:1298479-1298498 | Msa1306360:intron | 45.0% |
| ! | AGAATGGGGATTGCTGCTTA+TGG | - | chr8_4:1298543-1298562 | Msa1306360:CDS | 45.0% |
| ACAGGTATGCTGTTATGCAC+AGG | - | chr8_4:1298733-1298752 | Msa1306360:CDS | 45.0% | |
| AGAGAACTCCAAGAAGAGAC+AGG | - | chr8_4:1298993-1299012 | Msa1306360:intron | 45.0% | |
| ATGATCTTCACACATGCGCA+AGG | - | chr8_4:1299217-1299236 | Msa1306360:CDS | 45.0% | |
| GCGAAGTTTCATGGCATACT+CGG | + | chr8_4:1299430-1299449 | None:intergenic | 45.0% | |
| !! | TCTCTTCACATGCTGGTTCA+AGG | - | chr8_4:1300003-1300022 | Msa1306360:CDS | 45.0% |
| TAAATGGCAGGGAAAGCTTC+AGG | - | chr8_4:1300315-1300334 | Msa1306360:intron | 45.0% | |
| TGTTCGCCAAATGAGATTGC+AGG | - | chr8_4:1301418-1301437 | Msa1306360:intron | 45.0% | |
| GATTGCAGGCTTAAAGGGAT+AGG | - | chr8_4:1301432-1301451 | Msa1306360:intron | 45.0% | |
| ! | AATTTGAGACTGAGGGAGAG+TGG | - | chr8_4:1301591-1301610 | Msa1306360:intron | 45.0% |
| ! | ATTTGAGACTGAGGGAGAGT+GGG | - | chr8_4:1301592-1301611 | Msa1306360:intron | 45.0% |
| !!! | CCTTGGCAAGATAGTTTTGG+TGG | + | chr8_4:1301861-1301880 | None:intergenic | 45.0% |
| CCACCAAAACTATCTTGCCA+AGG | - | chr8_4:1301858-1301877 | Msa1306360:CDS | 45.0% | |
| ! | GAGATGATGATAGTGCAAGC+GGG | + | chr8_4:1301959-1301978 | None:intergenic | 45.0% |
| ! | CGAGATGATGATAGTGCAAG+CGG | + | chr8_4:1301960-1301979 | None:intergenic | 45.0% |
| GATGATCAACTGGCACTACT+CGG | - | chr8_4:1301979-1301998 | Msa1306360:intron | 45.0% | |
| CTAACTGGCGTTTACCTATC+AGG | - | chr8_4:1302055-1302074 | Msa1306360:CDS | 45.0% | |
| ! | AATGCTGGTGATGATGCAGT+TGG | - | chr8_4:1302083-1302102 | Msa1306360:CDS | 45.0% |
| !! | AAAAGTGCTCGTCGTTCTCA+AGG | - | chr8_4:1302146-1302165 | Msa1306360:CDS | 45.0% |
| AGTGCAATGTCAGGTGCAAA+AGG | - | chr8_4:1302176-1302195 | Msa1306360:CDS | 45.0% | |
| GTGCAATGTCAGGTGCAAAA+GGG | - | chr8_4:1302177-1302196 | Msa1306360:CDS | 45.0% | |
| AATGTCAGGTGCAAAAGGGA+TGG | - | chr8_4:1302181-1302200 | Msa1306360:CDS | 45.0% | |
| GGATGGTTTATGTGGAGTAC+AGG | - | chr8_4:1302198-1302217 | Msa1306360:CDS | 45.0% | |
| ACTTGAGATGTACCAGCACA+CGG | + | chr8_4:1302262-1302281 | None:intergenic | 45.0% | |
| ! | CTGGTACATCTCAAGTTGCT+GGG | - | chr8_4:1302266-1302285 | Msa1306360:intron | 45.0% |
| TTTCTTCCCCTATGCAGTAC+TGG | - | chr8_4:1302365-1302384 | Msa1306360:CDS | 45.0% | |
| TTCTTCCCCTATGCAGTACT+GGG | - | chr8_4:1302366-1302385 | Msa1306360:CDS | 45.0% | |
| !! | AAAAAAAAAAAACTATAAAT+AGG | + | chr8_4:1297285-1297304 | None:intergenic | 5.0% |
| !!! | TTAAAAAAAAATACTTTTTT+CGG | - | chr8_4:1301023-1301042 | Msa1306360:intron | 5.0% |
| CCATTGTCACAAGCCCAAAG+AGG | + | chr8_4:1294655-1294674 | None:intergenic | 50.0% | |
| CCTCTTTGGGCTTGTGACAA+TGG | - | chr8_4:1294652-1294671 | Msa1306360:CDS | 50.0% | |
| ! | TTTGTACCTGCAAACGGGCT+CGG | + | chr8_4:1294743-1294762 | None:intergenic | 50.0% |
| TTCGCTGTATGCTGCGGTTT+CGG | - | chr8_4:1294874-1294893 | Msa1306360:CDS | 50.0% | |
| TGTGGAATCTCCGTTTCCAG+AGG | - | chr8_4:1295039-1295058 | Msa1306360:intron | 50.0% | |
| CTGAAGCCACTCATCACCAT+GGG | + | chr8_4:1295291-1295310 | None:intergenic | 50.0% | |
| ACTGAAGCCACTCATCACCA+TGG | + | chr8_4:1295292-1295311 | None:intergenic | 50.0% | |
| TCTAACCCACTCTTACAGGC+TGG | + | chr8_4:1295466-1295485 | None:intergenic | 50.0% | |
| TGGGTCTAACCCACTCTTAC+AGG | + | chr8_4:1295470-1295489 | None:intergenic | 50.0% | |
| TAGGGGATGGAATCCCAAGA+GGG | + | chr8_4:1295636-1295655 | None:intergenic | 50.0% | |
| ATAGGGGATGGAATCCCAAG+AGG | + | chr8_4:1295637-1295656 | None:intergenic | 50.0% | |
| GATTGGGTCGTTCATGTCTC+AGG | - | chr8_4:1295992-1296011 | Msa1306360:intron | 50.0% | |
| GGAAAAACTACATCAGGGGG+GGG | - | chr8_4:1296297-1296316 | Msa1306360:intron | 50.0% | |
| TAAAGCCCCAAGCACAACCA+CGG | - | chr8_4:1297801-1297820 | Msa1306360:intron | 50.0% | |
| ATATGGCCGTGGTTGTGCTT+GGG | + | chr8_4:1297810-1297829 | None:intergenic | 50.0% | |
| CTCTTCTCTTGATATGGCCG+TGG | + | chr8_4:1297821-1297840 | None:intergenic | 50.0% | |
| ! | TATGGCTGGCAGCTTTTGCA+AGG | - | chr8_4:1297865-1297884 | Msa1306360:intron | 50.0% |
| ! | ATGGCTGGCAGCTTTTGCAA+GGG | - | chr8_4:1297866-1297885 | Msa1306360:intron | 50.0% |
| ! | TTTGCAAGGGCATGTGTCAC+TGG | - | chr8_4:1297879-1297898 | Msa1306360:intron | 50.0% |
| GGATCTTGCTCTACCTGAAG+GGG | + | chr8_4:1298227-1298246 | None:intergenic | 50.0% | |
| CGGATCTTGCTCTACCTGAA+GGG | + | chr8_4:1298228-1298247 | None:intergenic | 50.0% | |
| CCTTCAGGTAGAGCAAGATC+CGG | - | chr8_4:1298226-1298245 | Msa1306360:intron | 50.0% | |
| ! | TTGGTGTTTCAGCAGCTTCC+CGG | - | chr8_4:1298287-1298306 | Msa1306360:intron | 50.0% |
| GACAGCAAAGAGAGATTCCG+TGG | - | chr8_4:1298424-1298443 | Msa1306360:intron | 50.0% | |
| CAACAACTCCAGCGTTACCA+CGG | + | chr8_4:1298444-1298463 | None:intergenic | 50.0% | |
| GCATGATAAACAGGTGCACG+TGG | - | chr8_4:1298648-1298667 | Msa1306360:CDS | 50.0% | |
| TCACTCAGCAGAAGAGGCTT+TGG | + | chr8_4:1298781-1298800 | None:intergenic | 50.0% | |
| TGCAGCTACACTTGTGAGAG+AGG | - | chr8_4:1298816-1298835 | Msa1306360:intron | 50.0% | |
| AGGCTTCACCTGTCTCTTCT+TGG | + | chr8_4:1299004-1299023 | None:intergenic | 50.0% | |
| AAGAGACAGGTGAAGCCTCT+GGG | - | chr8_4:1299006-1299025 | Msa1306360:intron | 50.0% | |
| ! | AATTACCACGAAAGGGCACG+TGG | - | chr8_4:1299363-1299382 | Msa1306360:intron | 50.0% |
| !! | TATGGTGCTACAAGGTGCTG+TGG | - | chr8_4:1299462-1299481 | Msa1306360:intron | 50.0% |
| AGCGTCTGGGTCGTATTCTT+AGG | - | chr8_4:1300039-1300058 | Msa1306360:intron | 50.0% | |
| GCGTCTGGGTCGTATTCTTA+GGG | - | chr8_4:1300040-1300059 | Msa1306360:intron | 50.0% | |
| GGGTCGTATTCTTAGGGCAA+AGG | - | chr8_4:1300046-1300065 | Msa1306360:intron | 50.0% | |
| GGGAAAGCTTCAGGATAGGA+TGG | - | chr8_4:1300324-1300343 | Msa1306360:intron | 50.0% | |
| AAGCTTCAGGATAGGATGGC+TGG | - | chr8_4:1300328-1300347 | Msa1306360:intron | 50.0% | |
| CTCACTCCCTATTGCACTTG+TGG | - | chr8_4:1300627-1300646 | Msa1306360:intron | 50.0% | |
| CTGTCCAAGACCATGTTGTG+AGG | - | chr8_4:1301466-1301485 | Msa1306360:intron | 50.0% | |
| TGATGCGGCAGAGAGAGAAA+GGG | - | chr8_4:1301532-1301551 | Msa1306360:intron | 50.0% | |
| AGCTTGCCTCCATCTGATGA+AGG | - | chr8_4:1301931-1301950 | Msa1306360:intron | 50.0% | |
| AAGCGGGATCCTTCATCAGA+TGG | + | chr8_4:1301943-1301962 | None:intergenic | 50.0% | |
| TCAACTGGCACTACTCGGAA+AGG | - | chr8_4:1301984-1302003 | Msa1306360:intron | 50.0% | |
| GGATCGATGAGTGCAATGTC+AGG | - | chr8_4:1302167-1302186 | Msa1306360:CDS | 50.0% | |
| ACGGCAGGCGTTATCATATC+AGG | + | chr8_4:1302243-1302262 | None:intergenic | 50.0% | |
| ! | GCTGGTACATCTCAAGTTGC+TGG | - | chr8_4:1302265-1302284 | Msa1306360:intron | 50.0% |
| TTACGCCCAGTACTGCATAG+GGG | + | chr8_4:1302374-1302393 | None:intergenic | 50.0% | |
| GTTACGCCCAGTACTGCATA+GGG | + | chr8_4:1302375-1302394 | None:intergenic | 50.0% | |
| TGTTACGCCCAGTACTGCAT+AGG | + | chr8_4:1302376-1302395 | None:intergenic | 50.0% | |
| ! | TGCAGTACTGGGCGTAACAA+AGG | - | chr8_4:1302377-1302396 | Msa1306360:CDS | 50.0% |
| ! | TCGGCTTGCTCTTGATCTGT+TGG | + | chr8_4:1302403-1302422 | None:intergenic | 50.0% |
| ATTATACAGACGCCACCGCA+TGG | + | chr8_4:1302502-1302521 | None:intergenic | 50.0% | |
| AACATCAACCCTGTGTGGTG+AGG | + | chr8_4:1302656-1302675 | None:intergenic | 50.0% | |
| ACCGCATTCGCTGTATGCTG+CGG | - | chr8_4:1294868-1294887 | Msa1306360:CDS | 55.0% | |
| ACCGCAGCATACAGCGAATG+CGG | + | chr8_4:1294872-1294891 | None:intergenic | 55.0% | |
| CTGTATGCTGCGGTTTCGGT+TGG | - | chr8_4:1294878-1294897 | Msa1306360:CDS | 55.0% | |
| GCGAGCAAGGATCACTTCTG+AGG | - | chr8_4:1295188-1295207 | Msa1306360:intron | 55.0% | |
| GGTTGGGTGACCTGTTGGAT+AGG | - | chr8_4:1295390-1295409 | Msa1306360:intron | 55.0% | |
| ! | GGGGCTTTAGTTCCATCTCG+AGG | + | chr8_4:1297790-1297809 | None:intergenic | 55.0% |
| TATGGCCGTGGTTGTGCTTG+GGG | + | chr8_4:1297809-1297828 | None:intergenic | 55.0% | |
| GATATGGCCGTGGTTGTGCT+TGG | + | chr8_4:1297811-1297830 | None:intergenic | 55.0% | |
| CCGGATCTTGCTCTACCTGA+AGG | + | chr8_4:1298229-1298248 | None:intergenic | 55.0% | |
| GGCAACAAATGCCGTCTCTG+TGG | - | chr8_4:1298333-1298352 | Msa1306360:CDS | 55.0% | |
| ATGCCGTCTCTGTGGATCAG+TGG | - | chr8_4:1298341-1298360 | Msa1306360:CDS | 55.0% | |
| TGCCGTCTCTGTGGATCAGT+GGG | - | chr8_4:1298342-1298361 | Msa1306360:CDS | 55.0% | |
| AGCCCACTGATCCACAGAGA+CGG | + | chr8_4:1298347-1298366 | None:intergenic | 55.0% | |
| ! | GAGAGATTCCGTGGTAACGC+TGG | - | chr8_4:1298433-1298452 | Msa1306360:intron | 55.0% |
| ! | GGGATTGCTGCTTATGGACG+AGG | - | chr8_4:1298549-1298568 | Msa1306360:CDS | 55.0% |
| CACTGCAAACTTGGGCTCAC+AGG | - | chr8_4:1298715-1298734 | Msa1306360:CDS | 55.0% | |
| GAAGAGACAGGTGAAGCCTC+TGG | - | chr8_4:1299005-1299024 | Msa1306360:intron | 55.0% | |
| TATCACCACGTGCCCTTTCG+TGG | + | chr8_4:1299371-1299390 | None:intergenic | 55.0% | |
| ! | CGTCAAGAAGCACAGCGTCT+GGG | - | chr8_4:1300026-1300045 | Msa1306360:CDS | 55.0% |
| CAAGAGAGCCCACTGGCAAA+AGG | + | chr8_4:1300276-1300295 | None:intergenic | 55.0% | |
| GAATCAGCAAGAGAGCCCAC+TGG | + | chr8_4:1300283-1300302 | None:intergenic | 55.0% | |
| GGCAGGGAAAGCTTCAGGAT+AGG | - | chr8_4:1300320-1300339 | Msa1306360:intron | 55.0% | |
| CTTCAGGATAGGATGGCTGG+TGG | - | chr8_4:1300331-1300350 | Msa1306360:intron | 55.0% | |
| TAGGATGGCTGGTGGCAAAG+AGG | - | chr8_4:1300339-1300358 | Msa1306360:intron | 55.0% | |
| !! | CTGGGTATCGGTCGACACAA+GGG | + | chr8_4:1300386-1300405 | None:intergenic | 55.0% |
| CTGATGCGGCAGAGAGAGAA+AGG | - | chr8_4:1301531-1301550 | Msa1306360:intron | 55.0% | |
| GATGCGGCAGAGAGAGAAAG+GGG | - | chr8_4:1301533-1301552 | Msa1306360:intron | 55.0% | |
| TCTCTGTAGGAGCTCAGCTC+TGG | - | chr8_4:1301669-1301688 | Msa1306360:intron | 55.0% | |
| CGGGATCCTTCATCAGATGG+AGG | + | chr8_4:1301940-1301959 | None:intergenic | 55.0% | |
| CGAGGTCTGGGTTCACCTGT+AGG | + | chr8_4:1297772-1297791 | None:intergenic | 60.0% | |
| GGTGAACCCAGACCTCGAGA+TGG | - | chr8_4:1297775-1297794 | Msa1306360:intron | 60.0% | |
| AGGGACTTTCCGGCACCACA+AGG | + | chr8_4:1298265-1298284 | None:intergenic | 60.0% | |
| ! | GGTGCCGGAAAGTCCCTAGT+TGG | - | chr8_4:1298268-1298287 | Msa1306360:intron | 60.0% |
| ! | GCGTCAAGAAGCACAGCGTC+TGG | - | chr8_4:1300025-1300044 | Msa1306360:CDS | 60.0% |
| !! | CCTGGGTATCGGTCGACACA+AGG | + | chr8_4:1300387-1300406 | None:intergenic | 60.0% |
| ! | CCTTGTGTCGACCGATACCC+AGG | - | chr8_4:1300384-1300403 | Msa1306360:intron | 60.0% |
| TGAGACTGAGGGAGAGTGGG+AGG | - | chr8_4:1301595-1301614 | Msa1306360:intron | 60.0% | |
| GAGACTGAGGGAGAGTGGGA+GGG | - | chr8_4:1301596-1301615 | Msa1306360:intron | 60.0% | |
| AGACTGAGGGAGAGTGGGAG+GGG | - | chr8_4:1301597-1301616 | Msa1306360:intron | 60.0% | |
| !! | GAGAGTGGGAGGGGGTATCT+TGG | - | chr8_4:1301606-1301625 | Msa1306360:intron | 60.0% |
| ATCGGGACCACAGTTCGAGC+AGG | + | chr8_4:1301807-1301826 | None:intergenic | 60.0% | |
| ! | TGATAACGCCTGCCGTGTGC+TGG | - | chr8_4:1302247-1302266 | Msa1306360:intron | 60.0% |
| GAGATGTACCAGCACACGGC+AGG | + | chr8_4:1302258-1302277 | None:intergenic | 60.0% | |
| TCCTGGTGACCTCACCACAC+AGG | - | chr8_4:1302644-1302663 | Msa1306360:intron | 60.0% | |
| CCTGGTGACCTCACCACACA+GGG | - | chr8_4:1302645-1302664 | Msa1306360:intron | 60.0% | |
| GACTGAGGGAGAGTGGGAGG+GGG | - | chr8_4:1301598-1301617 | Msa1306360:intron | 65.0% | |
| CCCTGTGTGGTGAGGTCACC+AGG | + | chr8_4:1302648-1302667 | None:intergenic | 65.0% | |
| ! | CCTGCAAACGGGCTCGGCGA+TGG | + | chr8_4:1294737-1294756 | None:intergenic | 70.0% |
| CCATCGCCGAGCCCGTTTGC+AGG | - | chr8_4:1294734-1294753 | Msa1306360:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 1294198 | 1302860 | 1294198 | ID=Msa1306360;Name=Msa1306360 |
| chr8_4 | mRNA | 1294198 | 1302860 | 1294198 | ID=Msa1306360-mRNA-1;Parent=Msa1306360;Name=Msa1306360-mRNA-1;_AED=0.15;_eAED=0.15;_QI=21|0.94|0.95|1|1|1|20|385|767 |
| chr8_4 | exon | 1294198 | 1294676 | 1294198 | ID=Msa1306360-mRNA-1:exon:296;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1294839 | 1294981 | 1294839 | ID=Msa1306360-mRNA-1:exon:295;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1295053 | 1295136 | 1295053 | ID=Msa1306360-mRNA-1:exon:294;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1296453 | 1296512 | 1296453 | ID=Msa1306360-mRNA-1:exon:293;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1296653 | 1296733 | 1296653 | ID=Msa1306360-mRNA-1:exon:292;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1296991 | 1297104 | 1296991 | ID=Msa1306360-mRNA-1:exon:291;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1297423 | 1297495 | 1297423 | ID=Msa1306360-mRNA-1:exon:290;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1297583 | 1297746 | 1297583 | ID=Msa1306360-mRNA-1:exon:289;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1298044 | 1298237 | 1298044 | ID=Msa1306360-mRNA-1:exon:288;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1298322 | 1298397 | 1298322 | ID=Msa1306360-mRNA-1:exon:287;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1298488 | 1298825 | 1298488 | ID=Msa1306360-mRNA-1:exon:286;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1299195 | 1299282 | 1299195 | ID=Msa1306360-mRNA-1:exon:285;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1299967 | 1300047 | 1299967 | ID=Msa1306360-mRNA-1:exon:284;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1301221 | 1301361 | 1301221 | ID=Msa1306360-mRNA-1:exon:283;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1301849 | 1301905 | 1301849 | ID=Msa1306360-mRNA-1:exon:282;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1301998 | 1302220 | 1301998 | ID=Msa1306360-mRNA-1:exon:281;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1302303 | 1302462 | 1302303 | ID=Msa1306360-mRNA-1:exon:280;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1302542 | 1302614 | 1302542 | ID=Msa1306360-mRNA-1:exon:279;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1302694 | 1302743 | 1302694 | ID=Msa1306360-mRNA-1:exon:278;Parent=Msa1306360-mRNA-1 |
| chr8_4 | exon | 1302830 | 1302860 | 1302830 | ID=Msa1306360-mRNA-1:exon:277;Parent=Msa1306360-mRNA-1 |
| chr8_4 | five_prime_UTR | 1302840 | 1302860 | 1302840 | ID=Msa1306360-mRNA-1:five_prime_utr;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1302830 | 1302839 | 1302830 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1302694 | 1302743 | 1302694 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1302542 | 1302614 | 1302542 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1302303 | 1302462 | 1302303 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1301998 | 1302220 | 1301998 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1301849 | 1301905 | 1301849 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1301221 | 1301361 | 1301221 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1299967 | 1300047 | 1299967 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1299195 | 1299282 | 1299195 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1298488 | 1298825 | 1298488 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1298322 | 1298397 | 1298322 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1298044 | 1298237 | 1298044 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1297583 | 1297746 | 1297583 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1297423 | 1297495 | 1297423 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1296991 | 1297104 | 1296991 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1296653 | 1296733 | 1296653 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1296453 | 1296512 | 1296453 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1295053 | 1295136 | 1295053 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1294839 | 1294981 | 1294839 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | CDS | 1294583 | 1294676 | 1294583 | ID=Msa1306360-mRNA-1:cds;Parent=Msa1306360-mRNA-1 |
| chr8_4 | three_prime_UTR | 1294198 | 1294582 | 1294198 | ID=Msa1306360-mRNA-1:three_prime_utr;Parent=Msa1306360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
