Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653320 | XP_013457042.1 | 99.248 | 133 | 1 | 0 | 1 | 133 | 1 | 133 | 4.03e-90 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653320 | sp|O65426|LOL2_ARATH | 64.407 | 118 | 32 | 3 | 15 | 123 | 25 | 141 | 7.07e-45 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653320 | A0A072UPT8 | 99.248 | 133 | 1 | 0 | 1 | 133 | 1 | 133 | 1.92e-90 | 267 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0653320 | TF | C2C2-LSD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0653320 | 0.831821 | 1.343216e-55 | -8.615850e-47 |
| Msa0005000 | Msa0653320 | 0.807447 | 5.033255e-50 | -8.615850e-47 |
| Msa0017320 | Msa0653320 | -0.823484 | 1.351056e-53 | -8.615850e-47 |
| Msa0022750 | Msa0653320 | 0.802312 | 5.955964e-49 | -8.615850e-47 |
| Msa0027390 | Msa0653320 | -0.813653 | 2.295191e-51 | -8.615850e-47 |
| Msa0029850 | Msa0653320 | -0.805285 | 1.436855e-49 | -8.615850e-47 |
| Msa0036370 | Msa0653320 | -0.805158 | 1.527736e-49 | -8.615850e-47 |
| Msa0038020 | Msa0653320 | -0.827535 | 1.482823e-54 | -8.615850e-47 |
| Msa0042550 | Msa0653320 | -0.817013 | 4.109529e-52 | -8.615850e-47 |
| Msa0043730 | Msa0653320 | -0.824170 | 9.332905e-54 | -8.615850e-47 |
| Msa0055070 | Msa0653320 | -0.835017 | 2.142635e-56 | -8.615850e-47 |
| Msa0064110 | Msa0653320 | -0.817082 | 3.966391e-52 | -8.615850e-47 |
| Msa0065650 | Msa0653320 | -0.802567 | 5.277087e-49 | -8.615850e-47 |
| Msa0068430 | Msa0653320 | -0.815486 | 9.020989e-52 | -8.615850e-47 |
| Msa0076700 | Msa0653320 | -0.813687 | 2.255972e-51 | -8.615850e-47 |
| Msa0077180 | Msa0653320 | -0.801829 | 7.484053e-49 | -8.615850e-47 |
| Msa0084430 | Msa0653320 | -0.829365 | 5.362100e-55 | -8.615850e-47 |
| Msa0085720 | Msa0653320 | -0.880285 | 6.225038e-70 | -8.615850e-47 |
| Msa0090030 | Msa0653320 | -0.837481 | 5.067830e-57 | -8.615850e-47 |
| Msa0090390 | Msa0653320 | -0.807527 | 4.840214e-50 | -8.615850e-47 |
| Msa0092170 | Msa0653320 | -0.825733 | 3.989963e-54 | -8.615850e-47 |
| Msa0092440 | Msa0653320 | -0.857162 | 1.968785e-62 | -8.615850e-47 |
| Msa0096580 | Msa0653320 | -0.809113 | 2.221574e-50 | -8.615850e-47 |
| Msa0098390 | Msa0653320 | 0.808862 | 2.513678e-50 | -8.615850e-47 |
| Msa0101020 | Msa0653320 | -0.836431 | 9.398588e-57 | -8.615850e-47 |
| Msa0119320 | Msa0653320 | -0.803391 | 3.564672e-49 | -8.615850e-47 |
| Msa0120340 | Msa0653320 | -0.802365 | 5.809115e-49 | -8.615850e-47 |
| Msa0612680 | Msa0653320 | 0.927506 | 1.069402e-91 | -8.615850e-47 |
| Msa0615220 | Msa0653320 | -0.809686 | 1.673887e-50 | -8.615850e-47 |
| Msa0617260 | Msa0653320 | -0.803138 | 4.021871e-49 | -8.615850e-47 |
| Msa0620330 | Msa0653320 | -0.805193 | 1.501987e-49 | -8.615850e-47 |
| Msa0621240 | Msa0653320 | -0.822849 | 1.901187e-53 | -8.615850e-47 |
| Msa0621650 | Msa0653320 | -0.810743 | 9.905165e-51 | -8.615850e-47 |
| Msa0626850 | Msa0653320 | -0.810443 | 1.149840e-50 | -8.615850e-47 |
| Msa0626990 | Msa0653320 | -0.848941 | 4.446081e-60 | -8.615850e-47 |
| Msa0627350 | Msa0653320 | -0.844704 | 6.409820e-59 | -8.615850e-47 |
| Msa0628290 | Msa0653320 | -0.809737 | 1.632349e-50 | -8.615850e-47 |
| Msa0630950 | Msa0653320 | -0.801711 | 7.916661e-49 | -8.615850e-47 |
| Msa0641730 | Msa0653320 | -0.805925 | 1.054646e-49 | -8.615850e-47 |
| Msa0651150 | Msa0653320 | -0.800119 | 1.673486e-48 | -8.615850e-47 |
| Msa0653320 | Msa0675990 | -0.812170 | 4.850287e-51 | -8.615850e-47 |
| Msa0653320 | Msa0679550 | -0.858176 | 9.859849e-63 | -8.615850e-47 |
| Msa0653320 | Msa0687450 | -0.801745 | 7.788604e-49 | -8.615850e-47 |
| Msa0653320 | Msa0698440 | -0.811556 | 6.598698e-51 | -8.615850e-47 |
| Msa0653320 | Msa0700230 | -0.800568 | 1.356230e-48 | -8.615850e-47 |
| Msa0653320 | Msa0703730 | -0.820928 | 5.292923e-53 | -8.615850e-47 |
| Msa0653320 | Msa0713350 | -0.811573 | 6.544848e-51 | -8.615850e-47 |
| Msa0653320 | Msa0715150 | -0.802164 | 6.388847e-49 | -8.615850e-47 |
| Msa0653320 | Msa0721340 | -0.811487 | 6.831412e-51 | -8.615850e-47 |
| Msa0653320 | Msa0724950 | -0.842743 | 2.146101e-58 | -8.615850e-47 |
| Msa0653320 | Msa0741160 | -0.823783 | 1.150054e-53 | -8.615850e-47 |
| Msa0653320 | Msa0747720 | 0.807803 | 4.228279e-50 | -8.615850e-47 |
| Msa0653320 | Msa0749440 | -0.806297 | 8.809416e-50 | -8.615850e-47 |
| Msa0653320 | Msa0754920 | -0.809594 | 1.751677e-50 | -8.615850e-47 |
| Msa0653320 | Msa0757050 | -0.805393 | 1.364296e-49 | -8.615850e-47 |
| Msa0653320 | Msa0760350 | -0.804153 | 2.476788e-49 | -8.615850e-47 |
| Msa0653320 | Msa0760990 | 0.800564 | 1.358638e-48 | -8.615850e-47 |
| Msa0653320 | Msa0761890 | -0.823324 | 1.472520e-53 | -8.615850e-47 |
| Msa0653320 | Msa0763080 | -0.823443 | 1.381354e-53 | -8.615850e-47 |
| Msa0653320 | Msa0780280 | -0.828842 | 7.178632e-55 | -8.615850e-47 |
| Msa0653320 | Msa0790170 | 0.815531 | 8.813783e-52 | -8.615850e-47 |
| Msa0653320 | Msa0799060 | -0.836525 | 8.891941e-57 | -8.615850e-47 |
| Msa0653320 | Msa0801730 | -0.809805 | 1.578134e-50 | -8.615850e-47 |
| Msa0653320 | Msa0803590 | -0.832144 | 1.117921e-55 | -8.615850e-47 |
| Msa0653320 | Msa0805420 | -0.806750 | 7.068271e-50 | -8.615850e-47 |
| Msa0653320 | Msa0809140 | -0.801206 | 1.004613e-48 | -8.615850e-47 |
| Msa0653320 | Msa0820530 | 0.828953 | 6.748537e-55 | -8.615850e-47 |
| Msa0653320 | Msa0821800 | -0.829545 | 4.848135e-55 | -8.615850e-47 |
| Msa0653320 | Msa0831150 | -0.813777 | 2.155973e-51 | -8.615850e-47 |
| Msa0653320 | Msa0844110 | -0.802670 | 5.026062e-49 | -8.615850e-47 |
| Msa0653320 | Msa0845070 | -0.846691 | 1.852196e-59 | -8.615850e-47 |
| Msa0653320 | Msa0849810 | -0.805721 | 1.164174e-49 | -8.615850e-47 |
| Msa0653320 | Msa0861830 | -0.849218 | 3.723974e-60 | -8.615850e-47 |
| Msa0653320 | Msa0866400 | -0.817081 | 3.967644e-52 | -8.615850e-47 |
| Msa0653320 | Msa0873860 | -0.801425 | 9.058475e-49 | -8.615850e-47 |
| Msa0653320 | Msa0876860 | 0.820885 | 5.414380e-53 | -8.615850e-47 |
| Msa0653320 | Msa0879860 | -0.800807 | 1.212039e-48 | -8.615850e-47 |
| Msa0653320 | Msa0891600 | 0.802006 | 6.885145e-49 | -8.615850e-47 |
| Msa0653320 | Msa0899350 | -0.802270 | 6.075621e-49 | -8.615850e-47 |
| Msa0653320 | Msa0908170 | -0.800952 | 1.132231e-48 | -8.615850e-47 |
| Msa0653320 | Msa0930820 | -0.838811 | 2.303683e-57 | -8.615850e-47 |
| Msa0653320 | Msa0937330 | -0.800687 | 1.282361e-48 | -8.615850e-47 |
| Msa0653320 | Msa0944730 | -0.829525 | 4.903131e-55 | -8.615850e-47 |
| Msa0653320 | Msa0945100 | -0.816689 | 4.857316e-52 | -8.615850e-47 |
| Msa0653320 | Msa0945120 | -0.813797 | 2.133968e-51 | -8.615850e-47 |
| Msa0653320 | Msa0957970 | -0.802479 | 5.501003e-49 | -8.615850e-47 |
| Msa0653320 | Msa0958030 | -0.801717 | 7.891251e-49 | -8.615850e-47 |
| Msa0653320 | Msa0959010 | -0.829084 | 6.272984e-55 | -8.615850e-47 |
| Msa0653320 | Msa0965020 | -0.818282 | 2.126409e-52 | -8.615850e-47 |
| Msa0653320 | Msa0981310 | -0.821997 | 2.997771e-53 | -8.615850e-47 |
| Msa0653320 | Msa0982270 | -0.808125 | 3.610693e-50 | -8.615850e-47 |
| Msa0653320 | Msa0982320 | 0.807688 | 4.472166e-50 | -8.615850e-47 |
| Msa0653320 | Msa1008750 | -0.818178 | 2.244110e-52 | -8.615850e-47 |
| Msa0653320 | Msa1021510 | -0.821361 | 4.205872e-53 | -8.615850e-47 |
| Msa0653320 | Msa1029080 | 0.824895 | 6.298542e-54 | -8.615850e-47 |
| Msa0653320 | Msa1032170 | -0.803989 | 2.679020e-49 | -8.615850e-47 |
| Msa0653320 | Msa1038210 | 0.809563 | 1.779169e-50 | -8.615850e-47 |
| Msa0653320 | Msa1048700 | -0.825422 | 4.728651e-54 | -8.615850e-47 |
| Msa0653320 | Msa1048750 | 0.810547 | 1.091593e-50 | -8.615850e-47 |
| Msa0653320 | Msa1056460 | -0.800725 | 1.259577e-48 | -8.615850e-47 |
| Msa0653320 | Msa1070840 | -0.816025 | 6.840588e-52 | -8.615850e-47 |
| Msa0653320 | Msa1072530 | 0.838563 | 2.670140e-57 | -8.615850e-47 |
| Msa0653320 | Msa1077070 | -0.810051 | 1.396715e-50 | -8.615850e-47 |
| Msa0653320 | Msa1077340 | -0.806259 | 8.972374e-50 | -8.615850e-47 |
| Msa0653320 | Msa1096060 | -0.803098 | 4.099842e-49 | -8.615850e-47 |
| Msa0653320 | Msa1096550 | -0.830200 | 3.357478e-55 | -8.615850e-47 |
| Msa0653320 | Msa1105500 | -0.808600 | 2.859565e-50 | -8.615850e-47 |
| Msa0653320 | Msa1109820 | -0.839570 | 1.463880e-57 | -8.615850e-47 |
| Msa0653320 | Msa1115280 | -0.807588 | 4.697434e-50 | -8.615850e-47 |
| Msa0653320 | Msa1118760 | -0.825133 | 5.533911e-54 | -8.615850e-47 |
| Msa0653320 | Msa1121110 | -0.808796 | 2.597674e-50 | -8.615850e-47 |
| Msa0653320 | Msa1122780 | -0.823458 | 1.370160e-53 | -8.615850e-47 |
| Msa0653320 | Msa1128330 | -0.808798 | 2.594454e-50 | -8.615850e-47 |
| Msa0653320 | Msa1130210 | 0.807384 | 5.190444e-50 | -8.615850e-47 |
| Msa0653320 | Msa1130530 | -0.823852 | 1.107860e-53 | -8.615850e-47 |
| Msa0653320 | Msa1133570 | -0.853025 | 3.137928e-61 | -8.615850e-47 |
| Msa0653320 | Msa1135880 | -0.811118 | 8.216510e-51 | -8.615850e-47 |
| Msa0653320 | Msa1143020 | -0.810346 | 1.206617e-50 | -8.615850e-47 |
| Msa0653320 | Msa1144970 | -0.820298 | 7.384671e-53 | -8.615850e-47 |
| Msa0653320 | Msa1156170 | 0.822872 | 1.876942e-53 | -8.615850e-47 |
| Msa0653320 | Msa1158660 | -0.827158 | 1.825358e-54 | -8.615850e-47 |
| Msa0653320 | Msa1163590 | 0.812250 | 4.659272e-51 | -8.615850e-47 |
| Msa0653320 | Msa1164020 | -0.808338 | 3.252401e-50 | -8.615850e-47 |
| Msa0653320 | Msa1172130 | 0.828150 | 1.055130e-54 | -8.615850e-47 |
| Msa0653320 | Msa1174310 | -0.882927 | 6.905892e-71 | -8.615850e-47 |
| Msa0653320 | Msa1176270 | -0.808061 | 3.725654e-50 | -8.615850e-47 |
| Msa0653320 | Msa1177780 | -0.820084 | 8.267579e-53 | -8.615850e-47 |
| Msa0653320 | Msa1182640 | -0.833762 | 4.427225e-56 | -8.615850e-47 |
| Msa0653320 | Msa1188600 | 0.803846 | 2.868779e-49 | -8.615850e-47 |
| Msa0653320 | Msa1199070 | -0.802202 | 6.273449e-49 | -8.615850e-47 |
| Msa0653320 | Msa1202750 | -0.800638 | 1.312056e-48 | -8.615850e-47 |
| Msa0653320 | Msa1224580 | 0.815498 | 8.962954e-52 | -8.615850e-47 |
| Msa0653320 | Msa1229850 | -0.843305 | 1.520849e-58 | -8.615850e-47 |
| Msa0653320 | Msa1235400 | -0.854073 | 1.568977e-61 | -8.615850e-47 |
| Msa0653320 | Msa1241800 | -0.807512 | 4.874091e-50 | -8.615850e-47 |
| Msa0653320 | Msa1244750 | 0.804301 | 2.307420e-49 | -8.615850e-47 |
| Msa0653320 | Msa1258370 | -0.828791 | 7.388162e-55 | -8.615850e-47 |
| Msa0653320 | Msa1263290 | 0.823568 | 1.291644e-53 | -8.615850e-47 |
| Msa0653320 | Msa1270660 | -0.833496 | 5.158494e-56 | -8.615850e-47 |
| Msa0653320 | Msa1270730 | -0.815381 | 9.520228e-52 | -8.615850e-47 |
| Msa0653320 | Msa1272320 | -0.801827 | 7.492971e-49 | -8.615850e-47 |
| Msa0653320 | Msa1272520 | -0.813686 | 2.257119e-51 | -8.615850e-47 |
| Msa0653320 | Msa1276440 | -0.800233 | 1.586559e-48 | -8.615850e-47 |
| Msa0653320 | Msa1276510 | -0.827608 | 1.424149e-54 | -8.615850e-47 |
| Msa0653320 | Msa1280620 | -0.814643 | 1.387844e-51 | -8.615850e-47 |
| Msa0653320 | Msa1286550 | -0.807282 | 5.455442e-50 | -8.615850e-47 |
| Msa0653320 | Msa1296300 | -0.822855 | 1.894508e-53 | -8.615850e-47 |
| Msa0653320 | Msa1307550 | -0.830335 | 3.112776e-55 | -8.615850e-47 |
| Msa0653320 | Msa1307740 | -0.822583 | 2.192400e-53 | -8.615850e-47 |
| Msa0653320 | Msa1310660 | -0.809278 | 2.047863e-50 | -8.615850e-47 |
| Msa0653320 | Msa1314770 | -0.873110 | 1.895509e-67 | -8.615850e-47 |
| Msa0653320 | Msa1330890 | 0.812039 | 5.181640e-51 | -8.615850e-47 |
| Msa0653320 | Msa1335710 | -0.816869 | 4.427889e-52 | -8.615850e-47 |
| Msa0653320 | Msa1336040 | -0.802620 | 5.144710e-49 | -8.615850e-47 |
| Msa0653320 | Msa1338250 | -0.822434 | 2.373591e-53 | -8.615850e-47 |
| Msa0653320 | Msa1339190 | -0.823601 | 1.269004e-53 | -8.615850e-47 |
| Msa0653320 | Msa1340040 | 0.804379 | 2.222592e-49 | -8.615850e-47 |
| Msa0653320 | Msa1340810 | -0.816697 | 4.837475e-52 | -8.615850e-47 |
| Msa0653320 | Msa1340830 | -0.816234 | 6.143032e-52 | -8.615850e-47 |
| Msa0653320 | Msa1341490 | -0.814739 | 1.321568e-51 | -8.615850e-47 |
| Msa0653320 | Msa1348470 | 0.800652 | 1.303547e-48 | -8.615850e-47 |
| Msa0653320 | Msa1350690 | -0.844624 | 6.738541e-59 | -8.615850e-47 |
| Msa0653320 | Msa1359920 | -0.804398 | 2.202536e-49 | -8.615850e-47 |
| Msa0653320 | Msa1360240 | -0.821776 | 3.373779e-53 | -8.615850e-47 |
| Msa0653320 | Msa1360280 | -0.829980 | 3.798461e-55 | -8.615850e-47 |
| Msa0653320 | Msa1363700 | -0.833594 | 4.875039e-56 | -8.615850e-47 |
| Msa0653320 | Msa1366300 | -0.802328 | 5.909907e-49 | -8.615850e-47 |
| Msa0653320 | Msa1371090 | -0.811861 | 5.664408e-51 | -8.615850e-47 |
| Msa0653320 | Msa1371240 | -0.801636 | 8.202398e-49 | -8.615850e-47 |
| Msa0653320 | Msa1371940 | -0.808921 | 2.441439e-50 | -8.615850e-47 |
| Msa0653320 | Msa1372290 | -0.805673 | 1.191426e-49 | -8.615850e-47 |
| Msa0653320 | Msa1373350 | -0.820219 | 7.700432e-53 | -8.615850e-47 |
| Msa0653320 | Msa1376160 | 0.815230 | 1.028274e-51 | -8.615850e-47 |
| Msa0653320 | Msa1379850 | -0.800453 | 1.431168e-48 | -8.615850e-47 |
| Msa0653320 | Msa1393800 | -0.808117 | 3.626104e-50 | -8.615850e-47 |
| Msa0653320 | Msa1396010 | 0.801870 | 7.342777e-49 | -8.615850e-47 |
| Msa0653320 | Msa1396940 | -0.812717 | 3.684451e-51 | -8.615850e-47 |
| Msa0653320 | Msa1400070 | -0.837495 | 5.026565e-57 | -8.615850e-47 |
| Msa0653320 | Msa1404240 | 0.806988 | 6.294550e-50 | -8.615850e-47 |
| Msa0653320 | Msa1407650 | -0.818820 | 1.605909e-52 | -8.615850e-47 |
| Msa0653320 | Msa1417810 | 0.846958 | 1.565511e-59 | -8.615850e-47 |
| Msa0653320 | Msa1420250 | -0.801099 | 1.056376e-48 | -8.615850e-47 |
| Msa0653320 | Msa1422840 | -0.865441 | 5.893614e-65 | -8.615850e-47 |
| Msa0653320 | Msa1426570 | -0.823394 | 1.418361e-53 | -8.615850e-47 |
| Msa0653320 | Msa1433220 | -0.826559 | 2.538560e-54 | -8.615850e-47 |
| Msa0653320 | Msa1435400 | -0.811851 | 5.693093e-51 | -8.615850e-47 |
| Msa0653320 | Msa1443610 | -0.806604 | 7.586937e-50 | -8.615850e-47 |
| Msa0653320 | Msa1445220 | -0.840781 | 7.072082e-58 | -8.615850e-47 |
| Msa0653320 | Msa1445400 | 0.845211 | 4.676774e-59 | -8.615850e-47 |
| Msa0653320 | Msa1449350 | 0.852603 | 4.141801e-61 | -8.615850e-47 |
| Msa0653320 | Msa1458030 | -0.821055 | 4.947778e-53 | -8.615850e-47 |
| Msa0653320 | Msa1459760 | 0.804792 | 1.822551e-49 | -8.615850e-47 |
| Msa0124550 | Msa0653320 | -0.865218 | 6.925857e-65 | -8.615850e-47 |
| Msa0126230 | Msa0653320 | -0.817693 | 2.888257e-52 | -8.615850e-47 |
| Msa0126910 | Msa0653320 | -0.837070 | 6.456393e-57 | -8.615850e-47 |
| Msa0130520 | Msa0653320 | -0.831315 | 1.790096e-55 | -8.615850e-47 |
| Msa0137870 | Msa0653320 | -0.805023 | 1.630483e-49 | -8.615850e-47 |
| Msa0138210 | Msa0653320 | -0.812236 | 4.691822e-51 | -8.615850e-47 |
| Msa0140170 | Msa0653320 | -0.810254 | 1.263000e-50 | -8.615850e-47 |
| Msa0140400 | Msa0653320 | -0.815019 | 1.145706e-51 | -8.615850e-47 |
| Msa0140510 | Msa0653320 | 0.846063 | 2.748126e-59 | -8.615850e-47 |
| Msa0140520 | Msa0653320 | 0.809769 | 1.606300e-50 | -8.615850e-47 |
| Msa0145110 | Msa0653320 | -0.831521 | 1.592361e-55 | -8.615850e-47 |
| Msa0160670 | Msa0653320 | -0.802890 | 4.526463e-49 | -8.615850e-47 |
| Msa0161070 | Msa0653320 | 0.803984 | 2.684769e-49 | -8.615850e-47 |
| Msa0163560 | Msa0653320 | -0.806825 | 6.815279e-50 | -8.615850e-47 |
| Msa0165300 | Msa0653320 | -0.819356 | 1.212417e-52 | -8.615850e-47 |
| Msa0169820 | Msa0653320 | -0.815734 | 7.943200e-52 | -8.615850e-47 |
| Msa0171980 | Msa0653320 | -0.805881 | 1.077490e-49 | -8.615850e-47 |
| Msa0172000 | Msa0653320 | -0.807050 | 6.107917e-50 | -8.615850e-47 |
| Msa0175050 | Msa0653320 | -0.861663 | 8.755526e-64 | -8.615850e-47 |
| Msa0176330 | Msa0653320 | -0.808457 | 3.068672e-50 | -8.615850e-47 |
| Msa0178510 | Msa0653320 | -0.806182 | 9.315957e-50 | -8.615850e-47 |
| Msa0183010 | Msa0653320 | 0.827350 | 1.642447e-54 | -8.615850e-47 |
| Msa0187060 | Msa0653320 | -0.802722 | 4.901309e-49 | -8.615850e-47 |
| Msa0188050 | Msa0653320 | -0.824727 | 6.902055e-54 | -8.615850e-47 |
| Msa0193540 | Msa0653320 | -0.849057 | 4.128964e-60 | -8.615850e-47 |
| Msa0194720 | Msa0653320 | -0.841354 | 5.000677e-58 | -8.615850e-47 |
| Msa0198940 | Msa0653320 | -0.815511 | 8.905287e-52 | -8.615850e-47 |
| Msa0199800 | Msa0653320 | 0.831322 | 1.782451e-55 | -8.615850e-47 |
| Msa0202930 | Msa0653320 | -0.807560 | 4.762079e-50 | -8.615850e-47 |
| Msa0208810 | Msa0653320 | -0.810411 | 1.167979e-50 | -8.615850e-47 |
| Msa0212750 | Msa0653320 | 0.812760 | 3.604333e-51 | -8.615850e-47 |
| Msa0227230 | Msa0653320 | -0.806016 | 1.009430e-49 | -8.615850e-47 |
| Msa0230640 | Msa0653320 | 0.801586 | 8.394872e-49 | -8.615850e-47 |
| Msa0235470 | Msa0653320 | -0.823834 | 1.118587e-53 | -8.615850e-47 |
| Msa0236740 | Msa0653320 | -0.807386 | 5.184064e-50 | -8.615850e-47 |
| Msa0365490 | Msa0653320 | -0.817917 | 2.570776e-52 | -8.615850e-47 |
| Msa0377440 | Msa0653320 | -0.826592 | 2.493318e-54 | -8.615850e-47 |
| Msa0377530 | Msa0653320 | -0.819695 | 1.014757e-52 | -8.615850e-47 |
| Msa0381000 | Msa0653320 | -0.822061 | 2.896773e-53 | -8.615850e-47 |
| Msa0381080 | Msa0653320 | -0.804472 | 2.125370e-49 | -8.615850e-47 |
| Msa0387050 | Msa0653320 | -0.807386 | 5.183597e-50 | -8.615850e-47 |
| Msa0388030 | Msa0653320 | 0.869535 | 2.878367e-66 | -8.615850e-47 |
| Msa0388220 | Msa0653320 | -0.810758 | 9.831967e-51 | -8.615850e-47 |
| Msa0389810 | Msa0653320 | -0.814613 | 1.409177e-51 | -8.615850e-47 |
| Msa0390960 | Msa0653320 | -0.820027 | 8.518252e-53 | -8.615850e-47 |
| Msa0404700 | Msa0653320 | -0.832660 | 8.328362e-56 | -8.615850e-47 |
| Msa0410300 | Msa0653320 | -0.807428 | 5.078461e-50 | -8.615850e-47 |
| Msa0417650 | Msa0653320 | -0.846301 | 2.366761e-59 | -8.615850e-47 |
| Msa0417730 | Msa0653320 | -0.832686 | 8.203925e-56 | -8.615850e-47 |
| Msa0422180 | Msa0653320 | -0.810818 | 9.539234e-51 | -8.615850e-47 |
| Msa0423270 | Msa0653320 | -0.805848 | 1.094701e-49 | -8.615850e-47 |
| Msa0426810 | Msa0653320 | -0.812296 | 4.554297e-51 | -8.615850e-47 |
| Msa0430870 | Msa0653320 | -0.837676 | 4.516046e-57 | -8.615850e-47 |
| Msa0430950 | Msa0653320 | -0.816080 | 6.649689e-52 | -8.615850e-47 |
| Msa0436190 | Msa0653320 | -0.832171 | 1.100642e-55 | -8.615850e-47 |
| Msa0436370 | Msa0653320 | -0.801091 | 1.060141e-48 | -8.615850e-47 |
| Msa0461590 | Msa0653320 | -0.806608 | 7.573210e-50 | -8.615850e-47 |
| Msa0462540 | Msa0653320 | -0.823134 | 1.630898e-53 | -8.615850e-47 |
| Msa0464900 | Msa0653320 | -0.823302 | 1.490283e-53 | -8.615850e-47 |
| Msa0468130 | Msa0653320 | -0.818073 | 2.371361e-52 | -8.615850e-47 |
| Msa0482180 | Msa0653320 | -0.810259 | 1.259844e-50 | -8.615850e-47 |
| Msa0239690 | Msa0653320 | -0.827684 | 1.365867e-54 | -8.615850e-47 |
| Msa0241740 | Msa0653320 | -0.826799 | 2.224218e-54 | -8.615850e-47 |
| Msa0250670 | Msa0653320 | -0.804136 | 2.497314e-49 | -8.615850e-47 |
| Msa0251770 | Msa0653320 | -0.803776 | 2.965752e-49 | -8.615850e-47 |
| Msa0252550 | Msa0653320 | -0.800563 | 1.359280e-48 | -8.615850e-47 |
| Msa0262370 | Msa0653320 | -0.806348 | 8.591427e-50 | -8.615850e-47 |
| Msa0265150 | Msa0653320 | -0.800229 | 1.589770e-48 | -8.615850e-47 |
| Msa0266210 | Msa0653320 | -0.839378 | 1.642130e-57 | -8.615850e-47 |
| Msa0266240 | Msa0653320 | -0.847349 | 1.223322e-59 | -8.615850e-47 |
| Msa0269520 | Msa0653320 | -0.861864 | 7.601842e-64 | -8.615850e-47 |
| Msa0271580 | Msa0653320 | -0.825629 | 4.223489e-54 | -8.615850e-47 |
| Msa0271650 | Msa0653320 | -0.802810 | 4.700707e-49 | -8.615850e-47 |
| Msa0274630 | Msa0653320 | -0.844665 | 6.568407e-59 | -8.615850e-47 |
| Msa0279210 | Msa0653320 | 0.823142 | 1.624096e-53 | -8.615850e-47 |
| Msa0281480 | Msa0653320 | -0.831249 | 1.858107e-55 | -8.615850e-47 |
| Msa0287670 | Msa0653320 | -0.842973 | 1.863563e-58 | -8.615850e-47 |
| Msa0289400 | Msa0653320 | -0.805410 | 1.352963e-49 | -8.615850e-47 |
| Msa0296980 | Msa0653320 | 0.802420 | 5.657741e-49 | -8.615850e-47 |
| Msa0299580 | Msa0653320 | -0.808718 | 2.698105e-50 | -8.615850e-47 |
| Msa0300150 | Msa0653320 | -0.806225 | 9.121579e-50 | -8.615850e-47 |
| Msa0301810 | Msa0653320 | -0.801105 | 1.053248e-48 | -8.615850e-47 |
| Msa0304840 | Msa0653320 | -0.838672 | 2.501695e-57 | -8.615850e-47 |
| Msa0310430 | Msa0653320 | -0.801329 | 9.476736e-49 | -8.615850e-47 |
| Msa0312310 | Msa0653320 | -0.816328 | 5.851390e-52 | -8.615850e-47 |
| Msa0314060 | Msa0653320 | -0.843324 | 1.503300e-58 | -8.615850e-47 |
| Msa0318970 | Msa0653320 | 0.806404 | 8.363415e-50 | -8.615850e-47 |
| Msa0320610 | Msa0653320 | -0.832308 | 1.017832e-55 | -8.615850e-47 |
| Msa0341230 | Msa0653320 | -0.829200 | 5.880009e-55 | -8.615850e-47 |
| Msa0347990 | Msa0653320 | -0.807008 | 6.233060e-50 | -8.615850e-47 |
| Msa0349700 | Msa0653320 | -0.816247 | 6.100672e-52 | -8.615850e-47 |
| Msa0354660 | Msa0653320 | 0.807408 | 5.130149e-50 | -8.615850e-47 |
| Msa0362060 | Msa0653320 | -0.807449 | 5.027066e-50 | -8.615850e-47 |
| Msa0363170 | Msa0653320 | -0.831247 | 1.860163e-55 | -8.615850e-47 |
| Msa0485490 | Msa0653320 | -0.803149 | 4.000231e-49 | -8.615850e-47 |
| Msa0489610 | Msa0653320 | -0.801358 | 9.348183e-49 | -8.615850e-47 |
| Msa0505060 | Msa0653320 | -0.827566 | 1.457875e-54 | -8.615850e-47 |
| Msa0514610 | Msa0653320 | -0.804964 | 1.677346e-49 | -8.615850e-47 |
| Msa0517490 | Msa0653320 | -0.822363 | 2.465346e-53 | -8.615850e-47 |
| Msa0517650 | Msa0653320 | -0.804787 | 1.826972e-49 | -8.615850e-47 |
| Msa0519390 | Msa0653320 | -0.806594 | 7.625451e-50 | -8.615850e-47 |
| Msa0524600 | Msa0653320 | -0.824512 | 7.753008e-54 | -8.615850e-47 |
| Msa0527910 | Msa0653320 | -0.800347 | 1.503964e-48 | -8.615850e-47 |
| Msa0527980 | Msa0653320 | 0.812260 | 4.635740e-51 | -8.615850e-47 |
| Msa0530650 | Msa0653320 | -0.842532 | 2.441752e-58 | -8.615850e-47 |
| Msa0534410 | Msa0653320 | -0.820870 | 5.458213e-53 | -8.615850e-47 |
| Msa0537770 | Msa0653320 | -0.849653 | 2.815733e-60 | -8.615850e-47 |
| Msa0554380 | Msa0653320 | 0.814964 | 1.177905e-51 | -8.615850e-47 |
| Msa0557950 | Msa0653320 | 0.994302 | 3.714885e-206 | -8.615850e-47 |
| Msa0573040 | Msa0653320 | -0.843157 | 1.664862e-58 | -8.615850e-47 |
| Msa0579100 | Msa0653320 | -0.802661 | 5.047157e-49 | -8.615850e-47 |
| Msa0580640 | Msa0653320 | -0.804721 | 1.885419e-49 | -8.615850e-47 |
| Msa0587030 | Msa0653320 | -0.806059 | 9.887062e-50 | -8.615850e-47 |
| Msa0587190 | Msa0653320 | -0.858475 | 8.030691e-63 | -8.615850e-47 |
| Msa0594200 | Msa0653320 | -0.808054 | 3.739078e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653320 | MtrunA17_Chr4g0047341 | 97.368 | 114 | 3 | 0 | 1 | 114 | 1 | 114 | 3.51e-79 | 230 |
| Msa0653320 | MtrunA17_Chr4g0054701 | 56.098 | 82 | 34 | 1 | 32 | 113 | 64 | 143 | 6.54e-27 | 97.8 |
| Msa0653320 | MtrunA17_Chr2g0303181 | 43.434 | 99 | 54 | 1 | 31 | 127 | 33 | 131 | 2.13e-25 | 94.7 |
| Msa0653320 | MtrunA17_Chr8g0381011 | 48.864 | 88 | 43 | 1 | 32 | 119 | 35 | 120 | 9.01e-25 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653320 | AT4G21610.1 | 64.407 | 118 | 32 | 3 | 15 | 123 | 25 | 141 | 7.18e-46 | 146 |
| Msa0653320 | AT4G21610.2 | 62.617 | 107 | 30 | 3 | 15 | 112 | 25 | 130 | 1.49e-37 | 125 |
| Msa0653320 | AT1G32540.3 | 54.878 | 82 | 35 | 1 | 32 | 113 | 65 | 144 | 1.64e-26 | 97.4 |
| Msa0653320 | AT1G32540.2 | 54.878 | 82 | 35 | 1 | 32 | 113 | 65 | 144 | 1.64e-26 | 97.4 |
| Msa0653320 | AT1G32540.1 | 54.878 | 82 | 35 | 1 | 32 | 113 | 98 | 177 | 1.72e-26 | 98.2 |
| Msa0653320 | AT1G32540.5 | 57.143 | 77 | 31 | 1 | 32 | 108 | 65 | 139 | 8.60e-25 | 93.2 |
| Msa0653320 | AT4G20380.2 | 44.944 | 89 | 40 | 1 | 40 | 119 | 48 | 136 | 3.03e-22 | 87.4 |
| Msa0653320 | AT4G20380.7 | 44.944 | 89 | 40 | 1 | 40 | 119 | 48 | 136 | 3.03e-22 | 87.4 |
| Msa0653320 | AT4G20380.6 | 44.944 | 89 | 40 | 1 | 40 | 119 | 43 | 131 | 3.22e-22 | 87.0 |
| Msa0653320 | AT4G20380.3 | 44.944 | 89 | 40 | 1 | 40 | 119 | 43 | 131 | 3.22e-22 | 87.0 |
| Msa0653320 | AT4G20380.4 | 44.944 | 89 | 40 | 1 | 40 | 119 | 43 | 131 | 3.22e-22 | 87.0 |
| Msa0653320 | AT4G20380.1 | 44.944 | 89 | 40 | 1 | 40 | 119 | 43 | 131 | 3.22e-22 | 87.0 |
| Msa0653320 | AT4G20380.5 | 44.944 | 89 | 40 | 1 | 40 | 119 | 43 | 131 | 3.22e-22 | 87.0 |
| Msa0653320 | AT4G20380.9 | 45.122 | 82 | 36 | 1 | 40 | 112 | 43 | 124 | 5.36e-20 | 79.7 |
| Msa0653320 | AT4G20380.9 | 44.776 | 67 | 34 | 1 | 42 | 105 | 4 | 70 | 1.25e-13 | 63.5 |
| Msa0653320 | AT4G20380.8 | 35.652 | 115 | 39 | 1 | 40 | 119 | 43 | 157 | 5.77e-19 | 79.3 |
| Msa0653320 | AT4G20380.8 | 44.776 | 67 | 34 | 1 | 42 | 105 | 4 | 70 | 1.16e-13 | 65.1 |
| Msa0653320 | AT1G32540.4 | 44.872 | 78 | 42 | 1 | 31 | 107 | 23 | 100 | 1.26e-12 | 60.5 |
| Msa0653320 | AT1G32540.6 | 44.872 | 78 | 42 | 1 | 31 | 107 | 23 | 100 | 1.26e-12 | 60.5 |
| Msa0653320 | AT1G32540.7 | 45.833 | 72 | 38 | 1 | 37 | 107 | 62 | 133 | 3.63e-11 | 57.4 |
Find 78 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCCATTGTCCTATTAAC+TGG | 0.181792 | 4_3:+61288688 | Msa0653320:three_prime_UTR |
| CGTCGTCTTCTTTGTTTACT+TGG | 0.250828 | 4_3:-61285470 | None:intergenic |
| GGCCGTGGGCGTTGCGGTGG+GGG | 0.301669 | 4_3:-61285522 | None:intergenic |
| TGGCCGTGGGCGTTGCGGTG+GGG | 0.306898 | 4_3:-61285523 | None:intergenic |
| TGCCGGTTTGTGACAGAAAT+CGG | 0.319178 | 4_3:+61288129 | Msa0653320:CDS |
| AGGCCGCTAACAACCAGATT+TGG | 0.328376 | 4_3:-61288667 | None:intergenic |
| GGTGGCCGTGGGCGTTGCGG+TGG | 0.333387 | 4_3:-61285525 | None:intergenic |
| AGTGACGGTGGCGGTGGCCG+TGG | 0.335089 | 4_3:-61285537 | None:intergenic |
| ACAAGGATGACCCAGTTAAT+AGG | 0.337289 | 4_3:-61288699 | None:intergenic |
| GCATGAACATTTGACATGTT+TGG | 0.343047 | 4_3:-61285873 | None:intergenic |
| GTGGCCGTGGGCGTTGCGGT+GGG | 0.370495 | 4_3:-61285524 | None:intergenic |
| TTCCTTCGTCACAGCTGATC+AGG | 0.397948 | 4_3:+61288029 | Msa0653320:intron |
| AACTTGTCAATGTCAAGTTT+TGG | 0.403600 | 4_3:+61288791 | Msa0653320:three_prime_UTR |
| CTTCTTTGTTTACTTGGTGT+TGG | 0.410923 | 4_3:-61285464 | None:intergenic |
| CATTCATAATTTGTCATACA+AGG | 0.412323 | 4_3:-61288716 | None:intergenic |
| GGCCGCTAACAACCAGATTT+GGG | 0.413926 | 4_3:-61288666 | None:intergenic |
| TCTTAAATTTGCAATATGTA+TGG | 0.415707 | 4_3:+61288767 | Msa0653320:three_prime_UTR |
| AAACCAACTCCTCCCAAATC+TGG | 0.417656 | 4_3:+61288654 | Msa0653320:CDS |
| GCCGGTTTGTGACAGAAATC+GGG | 0.420532 | 4_3:+61288130 | Msa0653320:CDS |
| CAAGGGACAATGAAAAGAAA+AGG | 0.428643 | 4_3:-61288860 | None:intergenic |
| TGATTATGATGAAATTCAAT+TGG | 0.428793 | 4_3:+61288954 | Msa0653320:three_prime_UTR |
| TTGTATGACAAATTATGAAT+GGG | 0.429313 | 4_3:+61288718 | Msa0653320:three_prime_UTR |
| CTAATACAATGTTGACTGTC+TGG | 0.430906 | 4_3:-61285898 | None:intergenic |
| CATACGGTGCTCCACAAGTT+AGG | 0.437213 | 4_3:+61288097 | Msa0653320:CDS |
| CAACCAGATTTGGGAGGAGT+TGG | 0.440236 | 4_3:-61288657 | None:intergenic |
| CTTGTATGACAAATTATGAA+TGG | 0.446097 | 4_3:+61288717 | Msa0653320:three_prime_UTR |
| GTGACGGTGGCGGTGGCCGT+GGG | 0.451108 | 4_3:-61285536 | None:intergenic |
| CCCCGATTTCTGTCACAAAC+CGG | 0.464843 | 4_3:-61288131 | None:intergenic |
| GATGGGAGTGACGGTGGCGG+TGG | 0.475419 | 4_3:-61285543 | None:intergenic |
| ATAGGTTGCCAACCAGGTGG+CGG | 0.493264 | 4_3:-61285498 | None:intergenic |
| TGTAGTGTGTGAAGAAGTAA+CGG | 0.499517 | 4_3:+61285412 | Msa0653320:five_prime_UTR |
| GGCGGTGGCCGTGGGCGTTG+CGG | 0.501640 | 4_3:-61285528 | None:intergenic |
| ATACTATATGACAATATTCA+AGG | 0.505127 | 4_3:-61288878 | None:intergenic |
| ACAGTCAACATTGTATTAGA+AGG | 0.509196 | 4_3:+61285902 | Msa0653320:CDS |
| TAGGTTGCCAACCAGGTGGC+GGG | 0.511813 | 4_3:-61285497 | None:intergenic |
| CATTTGACATGTTTGGCACC+TGG | 0.517148 | 4_3:-61285866 | None:intergenic |
| CTAGAGTACAGGCGAATGGT+TGG | 0.520955 | 4_3:-61289016 | None:intergenic |
| CGCCTGCTTTCGTATCCACC+AGG | 0.522323 | 4_3:+61285848 | Msa0653320:CDS |
| AAGGGACAATGAAAAGAAAA+GGG | 0.522925 | 4_3:-61288859 | None:intergenic |
| AAGTTAGGTGTTCATCATGC+CGG | 0.527912 | 4_3:+61288112 | Msa0653320:CDS |
| CTAACTTGTGGAGCACCGTA+TGG | 0.535574 | 4_3:-61288096 | None:intergenic |
| CAGACAACAAGCGGCCTCCA+TGG | 0.537061 | 4_3:+61288616 | Msa0653320:CDS |
| CACCTGGTGGATACGAAAGC+AGG | 0.543193 | 4_3:-61285850 | None:intergenic |
| CCGGATGGGAGTGACGGTGG+CGG | 0.550715 | 4_3:-61285546 | None:intergenic |
| TACTATATGACAATATTCAA+GGG | 0.551540 | 4_3:-61288877 | None:intergenic |
| ACGACGGCCCGCCACCTGGT+TGG | 0.559468 | 4_3:+61285490 | Msa0653320:CDS |
| CCGCCACCGTCACTCCCATC+CGG | 0.560200 | 4_3:+61285546 | Msa0653320:CDS |
| CTCCCAAATCTGGTTGTTAG+CGG | 0.560296 | 4_3:+61288664 | Msa0653320:CDS |
| GACGACGACGGCCCGCCACC+TGG | 0.561082 | 4_3:+61285486 | Msa0653320:CDS |
| TGTCCATTGTCCTATTAACT+GGG | 0.565229 | 4_3:+61288689 | Msa0653320:three_prime_UTR |
| TTGTGCAGGCAGACAACAAG+CGG | 0.571247 | 4_3:+61288607 | Msa0653320:intron |
| GGGATCACGGGAGGAACAGA+AGG | 0.576535 | 4_3:-61288839 | None:intergenic |
| TAACTTGTGGAGCACCGTAT+GGG | 0.583052 | 4_3:-61288095 | None:intergenic |
| GTAGTGTGTGAAGAAGTAAC+GGG | 0.584958 | 4_3:+61285413 | Msa0653320:five_prime_UTR |
| ATGAAAAGAAAAGGGATCAC+GGG | 0.585104 | 4_3:-61288851 | None:intergenic |
| TTACTTTGTTGTACAGACCA+TGG | 0.588700 | 4_3:-61288633 | None:intergenic |
| AACTGACCGGATGGGAGTGA+CGG | 0.591272 | 4_3:-61285552 | None:intergenic |
| TTCGTCACAGCTGATCAGGT+TGG | 0.596338 | 4_3:+61288033 | Msa0653320:intron |
| CAGGTTGGACAAGTTAAGTG+TGG | 0.602861 | 4_3:+61288048 | Msa0653320:CDS |
| TGTATGACAAATTATGAATG+GGG | 0.603273 | 4_3:+61288719 | Msa0653320:three_prime_UTR |
| CATGATGAACACCTAACTTG+TGG | 0.604697 | 4_3:-61288108 | None:intergenic |
| AATGAAAAGAAAAGGGATCA+CGG | 0.605042 | 4_3:-61288852 | None:intergenic |
| TAAATAGCAACTGACCGGAT+GGG | 0.614535 | 4_3:-61285560 | None:intergenic |
| GAATCTAGAGTACAGGCGAA+TGG | 0.615992 | 4_3:-61289020 | None:intergenic |
| AGGTTGGACAAGTTAAGTGT+GGG | 0.628125 | 4_3:+61288049 | Msa0653320:CDS |
| TGACCGGATGGGAGTGACGG+TGG | 0.636305 | 4_3:-61285549 | None:intergenic |
| TTGACATGTTTGGCACCTGG+TGG | 0.642814 | 4_3:-61285863 | None:intergenic |
| CAGTTAATAGGACAATGGAC+AGG | 0.647351 | 4_3:-61288687 | None:intergenic |
| GGAATAGGTTGCCAACCAGG+TGG | 0.649831 | 4_3:-61285501 | None:intergenic |
| GTATTGCTAATGTACCCATA+CGG | 0.650598 | 4_3:+61288081 | Msa0653320:CDS |
| TTGGAAAAGACAATTAATCA+CGG | 0.653985 | 4_3:-61288997 | None:intergenic |
| CCGGTTTGTGACAGAAATCG+GGG | 0.660382 | 4_3:+61288131 | Msa0653320:CDS |
| AAAAGAAAAGGGATCACGGG+AGG | 0.670556 | 4_3:-61288848 | None:intergenic |
| CGCTAACAACCAGATTTGGG+AGG | 0.672253 | 4_3:-61288663 | None:intergenic |
| TGACCCAGTTAATAGGACAA+TGG | 0.679589 | 4_3:-61288692 | None:intergenic |
| CTGGTGGATACGAAAGCAGG+CGG | 0.684251 | 4_3:-61285847 | None:intergenic |
| GTAAACAAAGAAGACGACGA+CGG | 0.708854 | 4_3:+61285474 | Msa0653320:CDS |
| CTTTGTTGTACAGACCATGG+AGG | 0.723748 | 4_3:-61288630 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTGATTTTATATTGT+TGG | + | chr4_3:61288537-61288556 | Msa0653320:intron | 10.0% |
| !! | AAAATGTCTAATTGAAAATT+TGG | - | chr4_3:61287850-61287869 | None:intergenic | 15.0% |
| !!! | TTTTGACTTAAAAAATTAGA+AGG | - | chr4_3:61288202-61288221 | None:intergenic | 15.0% |
| !!! | ATAATGACCAAATATTTTCT+TGG | + | chr4_3:61286795-61286814 | Msa0653320:intron | 20.0% |
| !! | TTCATATTTGAAAATTGTGT+CGG | - | chr4_3:61286954-61286973 | None:intergenic | 20.0% |
| !! | GAAAATTTCATTAACATAAC+AGG | - | chr4_3:61287452-61287471 | None:intergenic | 20.0% |
| !! | ATATTCAACATTGTATTAGA+AGG | + | chr4_3:61287518-61287537 | Msa0653320:intron | 20.0% |
| !! | TTCATAAACAATTACATGAT+TGG | + | chr4_3:61287640-61287659 | Msa0653320:intron | 20.0% |
| !! | AGTAACATTTCTAACAAAAA+AGG | + | chr4_3:61287741-61287760 | Msa0653320:intron | 20.0% |
| !!! | TTCAATTAGACATTTTAGTA+TGG | + | chr4_3:61287854-61287873 | Msa0653320:intron | 20.0% |
| !! | ACATATTACATATTGTTCTA+AGG | + | chr4_3:61288256-61288275 | Msa0653320:intron | 20.0% |
| !! | TTGTATGACAAATTATGAAT+GGG | + | chr4_3:61288718-61288737 | Msa0653320:three_prime_UTR | 20.0% |
| !! | TCTTAAATTTGCAATATGTA+TGG | + | chr4_3:61288767-61288786 | Msa0653320:three_prime_UTR | 20.0% |
| !! | TACTATATGACAATATTCAA+GGG | - | chr4_3:61288880-61288899 | None:intergenic | 20.0% |
| !! | ATACTATATGACAATATTCA+AGG | - | chr4_3:61288881-61288900 | None:intergenic | 20.0% |
| !! | TGATTATGATGAAATTCAAT+TGG | + | chr4_3:61288954-61288973 | Msa0653320:three_prime_UTR | 20.0% |
| ! | GAGAAAAAAAGAGAAGTAAT+AGG | - | chr4_3:61285607-61285626 | None:intergenic | 25.0% |
| !!! | AAGCTCGTAGTTTTAATATT+TGG | + | chr4_3:61285627-61285646 | Msa0653320:intron | 25.0% |
| !!! | AGCTCGTAGTTTTAATATTT+GGG | + | chr4_3:61285628-61285647 | Msa0653320:intron | 25.0% |
| ! | CCATAAAAGGTTAAAACTAA+AGG | - | chr4_3:61285737-61285756 | None:intergenic | 25.0% |
| !!! | CCTTTAGTTTTAACCTTTTA+TGG | + | chr4_3:61285734-61285753 | Msa0653320:intron | 25.0% |
| !!! | AAATGAATTGGTTTTTTGTG+TGG | + | chr4_3:61285760-61285779 | Msa0653320:intron | 25.0% |
| !!! | TTTCTAAAAGCTAATTTTCG+AGG | - | chr4_3:61286015-61286034 | None:intergenic | 25.0% |
| !! | ATGAAATTTTCAATGCTCTA+CGG | + | chr4_3:61286276-61286295 | Msa0653320:intron | 25.0% |
| ! | ATCAAAAGTTGAAGATTACA+TGG | + | chr4_3:61287026-61287045 | Msa0653320:intron | 25.0% |
| ! | TCAAAAGTTGAAGATTACAT+GGG | + | chr4_3:61287027-61287046 | Msa0653320:intron | 25.0% |
| ! | AACTTAAAATGCAAGTTTCA+TGG | - | chr4_3:61287588-61287607 | None:intergenic | 25.0% |
| ! | TCATCAAATTCAAATGTGAT+TGG | - | chr4_3:61287812-61287831 | None:intergenic | 25.0% |
| ! | TACTTGTACAAAATATGACA+TGG | + | chr4_3:61287965-61287984 | Msa0653320:intron | 25.0% |
| ! | TACATAAATCAACTTGCAAT+TGG | - | chr4_3:61288237-61288256 | None:intergenic | 25.0% |
| ! | CTTTAAATTATCCAAGTGTA+GGG | + | chr4_3:61288427-61288446 | Msa0653320:intron | 25.0% |
| ! | TTTAAATTATCCAAGTGTAG+GGG | + | chr4_3:61288428-61288447 | Msa0653320:intron | 25.0% |
| !! | CATTCATAATTTGTCATACA+AGG | - | chr4_3:61288719-61288738 | None:intergenic | 25.0% |
| ! | CTTGTATGACAAATTATGAA+TGG | + | chr4_3:61288717-61288736 | Msa0653320:three_prime_UTR | 25.0% |
| ! | TGTATGACAAATTATGAATG+GGG | + | chr4_3:61288719-61288738 | Msa0653320:three_prime_UTR | 25.0% |
| ! | TTGGAAAAGACAATTAATCA+CGG | - | chr4_3:61289000-61289019 | None:intergenic | 25.0% |
| CTTCTTTCAAAAAACCACAA+GGG | - | chr4_3:61285384-61285403 | None:intergenic | 30.0% | |
| TCTTCTTTCAAAAAACCACA+AGG | - | chr4_3:61285385-61285404 | None:intergenic | 30.0% | |
| ATGAATAAATAGCAACTGAC+CGG | - | chr4_3:61285568-61285587 | None:intergenic | 30.0% | |
| !! | GGTTCAATTATTTCTGAAAG+AGG | + | chr4_3:61285649-61285668 | Msa0653320:intron | 30.0% |
| AACAAAAGCTGTGGAAAAAA+GGG | + | chr4_3:61285672-61285691 | Msa0653320:intron | 30.0% | |
| CAATTCATTTGAGCCATAAA+AGG | - | chr4_3:61285750-61285769 | None:intergenic | 30.0% | |
| ! | CTTTTATGGCTCAAATGAAT+TGG | + | chr4_3:61285748-61285767 | Msa0653320:intron | 30.0% |
| ACAGTCAACATTGTATTAGA+AGG | + | chr4_3:61285902-61285921 | Msa0653320:CDS | 30.0% | |
| AGACATGTTCATGAGAAAAA+AGG | - | chr4_3:61285936-61285955 | None:intergenic | 30.0% | |
| TAGTTGATCTACGAAGATTT+GGG | - | chr4_3:61286183-61286202 | None:intergenic | 30.0% | |
| TGCGATTCAGTTCAATAAAT+CGG | - | chr4_3:61286256-61286275 | None:intergenic | 30.0% | |
| ! | TGAAATTTTCAATGCTCTAC+GGG | + | chr4_3:61286277-61286296 | Msa0653320:intron | 30.0% |
| CTCAAGTTTATATCTCACAT+TGG | + | chr4_3:61286399-61286418 | Msa0653320:intron | 30.0% | |
| TTTGTCCAAAGTACAAACAA+GGG | - | chr4_3:61286471-61286490 | None:intergenic | 30.0% | |
| ATTTGTCCAAAGTACAAACA+AGG | - | chr4_3:61286472-61286491 | None:intergenic | 30.0% | |
| AACAACTATTTCAACATCGA+TGG | + | chr4_3:61286647-61286666 | Msa0653320:intron | 30.0% | |
| TGCAGCTTCAATTTCATTAT+GGG | - | chr4_3:61287065-61287084 | None:intergenic | 30.0% | |
| TTGCAGCTTCAATTTCATTA+TGG | - | chr4_3:61287066-61287085 | None:intergenic | 30.0% | |
| ! | AAACTATCCTCTTTTGTCAA+TGG | - | chr4_3:61287280-61287299 | None:intergenic | 30.0% |
| AGCTAACATGTATAAGATCA+TGG | + | chr4_3:61287303-61287322 | Msa0653320:intron | 30.0% | |
| CAGGAAATTTGATTACAATC+AGG | - | chr4_3:61287433-61287452 | None:intergenic | 30.0% | |
| !!! | GAAACTTGCATTTTAAGTTC+AGG | + | chr4_3:61287589-61287608 | Msa0653320:intron | 30.0% |
| !! | AGTTCAGGTTTTTATACATC+TGG | + | chr4_3:61287604-61287623 | Msa0653320:intron | 30.0% |
| AACTTCCTGGTCATTATAAA+AGG | + | chr4_3:61287764-61287783 | Msa0653320:intron | 30.0% | |
| ACTTCCTGGTCATTATAAAA+GGG | + | chr4_3:61287765-61287784 | Msa0653320:intron | 30.0% | |
| ! | ATTCAAATGTGATTGGTCAT+TGG | - | chr4_3:61287805-61287824 | None:intergenic | 30.0% |
| !!! | AGTCTAGTTTTCTCTTTGTA+CGG | + | chr4_3:61288364-61288383 | Msa0653320:intron | 30.0% |
| CCTACACTTGGATAATTTAA+AGG | - | chr4_3:61288429-61288448 | None:intergenic | 30.0% | |
| CCTTTAAATTATCCAAGTGT+AGG | + | chr4_3:61288426-61288445 | Msa0653320:intron | 30.0% | |
| TTAAATTATCCAAGTGTAGG+GGG | + | chr4_3:61288429-61288448 | Msa0653320:intron | 30.0% | |
| TCTTCAGATTGAATGAATAG+AGG | - | chr4_3:61288506-61288525 | None:intergenic | 30.0% | |
| TGAGGATATCAGTGTTTAAA+TGG | - | chr4_3:61288581-61288600 | None:intergenic | 30.0% | |
| ! | AACTTGTCAATGTCAAGTTT+TGG | + | chr4_3:61288791-61288810 | Msa0653320:three_prime_UTR | 30.0% |
| AATGAAAAGAAAAGGGATCA+CGG | - | chr4_3:61288855-61288874 | None:intergenic | 30.0% | |
| AAGGGACAATGAAAAGAAAA+GGG | - | chr4_3:61288862-61288881 | None:intergenic | 30.0% | |
| ! | TTTTCTCTATATGCGTATTC+AGG | - | chr4_3:61288929-61288948 | None:intergenic | 30.0% |
| TGTAGTGTGTGAAGAAGTAA+CGG | + | chr4_3:61285412-61285431 | Msa0653320:five_prime_UTR | 35.0% | |
| !! | CTTCTTTGTTTACTTGGTGT+TGG | - | chr4_3:61285467-61285486 | None:intergenic | 35.0% |
| GAACAAAAGCTGTGGAAAAA+AGG | + | chr4_3:61285671-61285690 | Msa0653320:intron | 35.0% | |
| ACAAAAGCTGTGGAAAAAAG+GGG | + | chr4_3:61285673-61285692 | Msa0653320:intron | 35.0% | |
| TTTGATACAGTTGTGTGAAC+AGG | + | chr4_3:61285794-61285813 | Msa0653320:intron | 35.0% | |
| GCATGAACATTTGACATGTT+TGG | - | chr4_3:61285876-61285895 | None:intergenic | 35.0% | |
| ! | CTAATACAATGTTGACTGTC+TGG | - | chr4_3:61285901-61285920 | None:intergenic | 35.0% |
| TTTATTTGAGAATCTCCAGC+TGG | + | chr4_3:61285987-61286006 | Msa0653320:intron | 35.0% | |
| GTAGTTGATCTACGAAGATT+TGG | - | chr4_3:61286184-61286203 | None:intergenic | 35.0% | |
| CTACAACAGATGAACCATAT+CGG | + | chr4_3:61286200-61286219 | Msa0653320:intron | 35.0% | |
| TCAATAAATCGGGGATTGTT+GGG | - | chr4_3:61286245-61286264 | None:intergenic | 35.0% | |
| TTCAATAAATCGGGGATTGT+TGG | - | chr4_3:61286246-61286265 | None:intergenic | 35.0% | |
| CGATTCAGTTCAATAAATCG+GGG | - | chr4_3:61286254-61286273 | None:intergenic | 35.0% | |
| GCGATTCAGTTCAATAAATC+GGG | - | chr4_3:61286255-61286274 | None:intergenic | 35.0% | |
| AAAGAGTGGTTAAGTTCCAT+TGG | + | chr4_3:61286342-61286361 | Msa0653320:intron | 35.0% | |
| GTGAGATATAAACTTGAGAG+AGG | - | chr4_3:61286397-61286416 | None:intergenic | 35.0% | |
| TTGTCCAAAGTACAAACAAG+GGG | - | chr4_3:61286470-61286489 | None:intergenic | 35.0% | |
| GACAAATTTGCAGTTGAGAT+AGG | + | chr4_3:61286485-61286504 | Msa0653320:intron | 35.0% | |
| GCAAATGATTGGAATGAGAA+TGG | - | chr4_3:61286597-61286616 | None:intergenic | 35.0% | |
| TGAAATAGTTGTTACCGTCT+AGG | - | chr4_3:61286640-61286659 | None:intergenic | 35.0% | |
| CTGGGAACCAAGAAAATATT+TGG | - | chr4_3:61286805-61286824 | None:intergenic | 35.0% | |
| ACAGGCTACTCCTAAAATTA+GGG | - | chr4_3:61286864-61286883 | None:intergenic | 35.0% | |
| TACAGGCTACTCCTAAAATT+AGG | - | chr4_3:61286865-61286884 | None:intergenic | 35.0% | |
| CATTGTTTGGATATTGCTGT+GGG | - | chr4_3:61286919-61286938 | None:intergenic | 35.0% | |
| ACATTGTTTGGATATTGCTG+TGG | - | chr4_3:61286920-61286939 | None:intergenic | 35.0% | |
| AACAACTCGTTGATCATAGT+TGG | - | chr4_3:61287002-61287021 | None:intergenic | 35.0% | |
| AACTATGATCAACGAGTTGT+TGG | + | chr4_3:61287001-61287020 | Msa0653320:intron | 35.0% | |
| AAAGTTGAAGATTACATGGG+AGG | + | chr4_3:61287030-61287049 | Msa0653320:intron | 35.0% | |
| !! | TTGTATACTCAGCTTTAAGC+TGG | - | chr4_3:61287117-61287136 | None:intergenic | 35.0% |
| AATGATTGACCAAGAACTCA+TGG | + | chr4_3:61287219-61287238 | Msa0653320:intron | 35.0% | |
| TATCATCTTGATCTTCGTCT+TGG | - | chr4_3:61287251-61287270 | None:intergenic | 35.0% | |
| ACTACGCTCATGTAATTAGA+AGG | + | chr4_3:61287335-61287354 | Msa0653320:intron | 35.0% | |
| ACAATCAGGCGTTAAACAAA+AGG | - | chr4_3:61287419-61287438 | None:intergenic | 35.0% | |
| CTAACAAAAAAGGAACTTCC+TGG | + | chr4_3:61287751-61287770 | Msa0653320:intron | 35.0% | |
| ! | GTATCCCTTTTATAATGACC+AGG | - | chr4_3:61287772-61287791 | None:intergenic | 35.0% |
| ACATAGCGTATATGCATTCT+TGG | - | chr4_3:61287889-61287908 | None:intergenic | 35.0% | |
| ! | CATGGCATTATTCTTTTGCA+TGG | + | chr4_3:61287983-61288002 | Msa0653320:intron | 35.0% |
| GTATTGCTAATGTACCCATA+CGG | + | chr4_3:61288081-61288100 | Msa0653320:CDS | 35.0% | |
| AAGTTTGACACTTGATGTAG+CGG | + | chr4_3:61288296-61288315 | Msa0653320:intron | 35.0% | |
| TCAGATTGAATGAATAGAGG+CGG | - | chr4_3:61288503-61288522 | None:intergenic | 35.0% | |
| ! | TATCCTCATGATTTTTGTGC+AGG | + | chr4_3:61288593-61288612 | Msa0653320:intron | 35.0% |
| ! | TTACTTTGTTGTACAGACCA+TGG | - | chr4_3:61288636-61288655 | None:intergenic | 35.0% |
| TGTCCATTGTCCTATTAACT+GGG | + | chr4_3:61288689-61288708 | Msa0653320:three_prime_UTR | 35.0% | |
| ATGAAAAGAAAAGGGATCAC+GGG | - | chr4_3:61288854-61288873 | None:intergenic | 35.0% | |
| CAAGGGACAATGAAAAGAAA+AGG | - | chr4_3:61288863-61288882 | None:intergenic | 35.0% | |
| !! | TGTTTTTACCTAGTCCCTTG+TGG | + | chr4_3:61285367-61285386 | Msa0653320:five_prime_UTR | 40.0% |
| TCAAAAAACCACAAGGGACT+AGG | - | chr4_3:61285378-61285397 | None:intergenic | 40.0% | |
| GTAGTGTGTGAAGAAGTAAC+GGG | + | chr4_3:61285413-61285432 | Msa0653320:five_prime_UTR | 40.0% | |
| ! | CGTCGTCTTCTTTGTTTACT+TGG | - | chr4_3:61285473-61285492 | None:intergenic | 40.0% |
| GTAAACAAAGAAGACGACGA+CGG | + | chr4_3:61285474-61285493 | Msa0653320:CDS | 40.0% | |
| TAAATAGCAACTGACCGGAT+GGG | - | chr4_3:61285563-61285582 | None:intergenic | 40.0% | |
| ATAAATAGCAACTGACCGGA+TGG | - | chr4_3:61285564-61285583 | None:intergenic | 40.0% | |
| TGAAAGAGGAACAAAAGCTG+TGG | + | chr4_3:61285663-61285682 | Msa0653320:intron | 40.0% | |
| TAAAGGAAGCTTCAAGCTTC+AGG | - | chr4_3:61285720-61285739 | None:intergenic | 40.0% | |
| ! | GTGAACAGGTTTTGCTCAAA+TGG | + | chr4_3:61285808-61285827 | Msa0653320:intron | 40.0% |
| ! | GGTTTTGCTCAAATGGTTTG+TGG | + | chr4_3:61285815-61285834 | Msa0653320:intron | 40.0% |
| TATAACCCTGATACCATGTC+AGG | + | chr4_3:61286071-61286090 | Msa0653320:intron | 40.0% | |
| ATCTACGAAGATTTGGGTAG+TGG | - | chr4_3:61286177-61286196 | None:intergenic | 40.0% | |
| GAATGGTGAATGATCCGATA+TGG | - | chr4_3:61286217-61286236 | None:intergenic | 40.0% | |
| ! | ACATAAAGTGGAGGGTGTAA+AGG | - | chr4_3:61286304-61286323 | None:intergenic | 40.0% |
| CCACTTTGACATAAAGTGGA+GGG | - | chr4_3:61286312-61286331 | None:intergenic | 40.0% | |
| CCTCCACTTTATGTCAAAGT+GGG | + | chr4_3:61286310-61286329 | Msa0653320:intron | 40.0% | |
| TGTCCCACTTTGACATAAAG+TGG | - | chr4_3:61286316-61286335 | None:intergenic | 40.0% | |
| !! | GTGGGACATTTTGAAAAGAG+TGG | + | chr4_3:61286328-61286347 | Msa0653320:intron | 40.0% |
| TGTTTATGCCTCAAACAGAG+AGG | + | chr4_3:61286430-61286449 | Msa0653320:intron | 40.0% | |
| !! | CTTGAGAGCATTGAGCAATA+GGG | - | chr4_3:61286543-61286562 | None:intergenic | 40.0% |
| AATAGTTGTTACCGTCTAGG+TGG | - | chr4_3:61286637-61286656 | None:intergenic | 40.0% | |
| !! | TCATCAGCCATTTGCTGTTT+GGG | - | chr4_3:61286724-61286743 | None:intergenic | 40.0% |
| !! | TTCATCAGCCATTTGCTGTT+TGG | - | chr4_3:61286725-61286744 | None:intergenic | 40.0% |
| ACCTATTCCAATGACGTTCT+AGG | + | chr4_3:61286746-61286765 | Msa0653320:intron | 40.0% | |
| TCCTAGAACGTCATTGGAAT+AGG | - | chr4_3:61286750-61286769 | None:intergenic | 40.0% | |
| !! | ATTCCAATGACGTTCTAGGA+CGG | + | chr4_3:61286750-61286769 | Msa0653320:intron | 40.0% |
| GGTTATAGTTCTCGTCTTCT+GGG | - | chr4_3:61286823-61286842 | None:intergenic | 40.0% | |
| TGGTTATAGTTCTCGTCTTC+TGG | - | chr4_3:61286824-61286843 | None:intergenic | 40.0% | |
| AGAAGACGAGAACTATAACC+AGG | + | chr4_3:61286823-61286842 | Msa0653320:intron | 40.0% | |
| ! | ATCAACCTGGCCCTAATTTT+AGG | + | chr4_3:61286851-61286870 | Msa0653320:intron | 40.0% |
| ! | TTGAAAATTGTGTCGGCGTT+AGG | - | chr4_3:61286947-61286966 | None:intergenic | 40.0% |
| ATAGTTGGAGTAGAACTGAG+CGG | - | chr4_3:61286987-61287006 | None:intergenic | 40.0% | |
| ! | TATCCTCTTTTGTCAATGGC+GGG | - | chr4_3:61287276-61287295 | None:intergenic | 40.0% |
| ! | CTATCCTCTTTTGTCAATGG+CGG | - | chr4_3:61287277-61287296 | None:intergenic | 40.0% |
| ACAGCTTATGAATTGCAGTG+CGG | - | chr4_3:61287375-61287394 | None:intergenic | 40.0% | |
| AGCACACAACTACCAATAAC+AGG | - | chr4_3:61287675-61287694 | None:intergenic | 40.0% | |
| AGGTTGGACAAGTTAAGTGT+GGG | + | chr4_3:61288049-61288068 | Msa0653320:CDS | 40.0% | |
| CATGATGAACACCTAACTTG+TGG | - | chr4_3:61288111-61288130 | None:intergenic | 40.0% | |
| AAGTTAGGTGTTCATCATGC+CGG | + | chr4_3:61288112-61288131 | Msa0653320:CDS | 40.0% | |
| CAGATTGAATGAATAGAGGC+GGG | - | chr4_3:61288502-61288521 | None:intergenic | 40.0% | |
| CAGTTAATAGGACAATGGAC+AGG | - | chr4_3:61288690-61288709 | None:intergenic | 40.0% | |
| CTGTCCATTGTCCTATTAAC+TGG | + | chr4_3:61288688-61288707 | Msa0653320:three_prime_UTR | 40.0% | |
| TGACCCAGTTAATAGGACAA+TGG | - | chr4_3:61288695-61288714 | None:intergenic | 40.0% | |
| ACAAGGATGACCCAGTTAAT+AGG | - | chr4_3:61288702-61288721 | None:intergenic | 40.0% | |
| AGCTGTGGAAAAAAGGGGTT+TGG | + | chr4_3:61285678-61285697 | Msa0653320:intron | 45.0% | |
| CATTTGACATGTTTGGCACC+TGG | - | chr4_3:61285869-61285888 | None:intergenic | 45.0% | |
| !! | CTAATTTTCGAGGAACCAGC+TGG | - | chr4_3:61286005-61286024 | None:intergenic | 45.0% |
| ATCTTCATCCAGTCCTGACA+TGG | - | chr4_3:61286087-61286106 | None:intergenic | 45.0% | |
| ! | TAACTGGGGTGTTACCTTCA+GGG | - | chr4_3:61286115-61286134 | None:intergenic | 45.0% |
| ! | ATAACTGGGGTGTTACCTTC+AGG | - | chr4_3:61286116-61286135 | None:intergenic | 45.0% |
| ! | TGGCTGGAGCTTTGATAACT+GGG | - | chr4_3:61286130-61286149 | None:intergenic | 45.0% |
| GTAGTGGTCCTTGAAAAGGA+CGG | - | chr4_3:61286161-61286180 | None:intergenic | 45.0% | |
| ! | TTGGGTAGTGGTCCTTGAAA+AGG | - | chr4_3:61286165-61286184 | None:intergenic | 45.0% |
| ATCGGATCATTCACCATTCG+TGG | + | chr4_3:61286218-61286237 | Msa0653320:intron | 45.0% | |
| CCCTCCACTTTATGTCAAAG+TGG | + | chr4_3:61286309-61286328 | Msa0653320:intron | 45.0% | |
| CCCACTTTGACATAAAGTGG+AGG | - | chr4_3:61286313-61286332 | None:intergenic | 45.0% | |
| ! | GCTTCCCCTTGTTTGTACTT+TGG | + | chr4_3:61286463-61286482 | Msa0653320:intron | 45.0% |
| !! | GCTTGAGAGCATTGAGCAAT+AGG | - | chr4_3:61286544-61286563 | None:intergenic | 45.0% |
| AATGGGGTGGTGCAAATGAT+TGG | - | chr4_3:61286608-61286627 | None:intergenic | 45.0% | |
| ! | TCATTTGCACCACCCCATTT+TGG | + | chr4_3:61286609-61286628 | Msa0653320:intron | 45.0% |
| GTCTAGGTGGTTCCAAAATG+GGG | - | chr4_3:61286624-61286643 | None:intergenic | 45.0% | |
| CGTCTAGGTGGTTCCAAAAT+GGG | - | chr4_3:61286625-61286644 | None:intergenic | 45.0% | |
| !!! | CCATTTTGGAACCACCTAGA+CGG | + | chr4_3:61286623-61286642 | Msa0653320:intron | 45.0% |
| CGCTGAAGAGTTCAGTATTG+AGG | - | chr4_3:61286679-61286698 | None:intergenic | 45.0% | |
| TGACTGACCCAAACAGCAAA+TGG | + | chr4_3:61286714-61286733 | Msa0653320:intron | 45.0% | |
| TGCCAGTCAAGTAGCCAAAA+TGG | - | chr4_3:61286776-61286795 | None:intergenic | 45.0% | |
| TAACCAGGATGACATCAACC+TGG | + | chr4_3:61286838-61286857 | Msa0653320:intron | 45.0% | |
| CTACTCCTAAAATTAGGGCC+AGG | - | chr4_3:61286859-61286878 | None:intergenic | 45.0% | |
| TATCATCATCGCTTGGAGCT+AGG | - | chr4_3:61286895-61286914 | None:intergenic | 45.0% | |
| TGTGGGATATCATCATCGCT+TGG | - | chr4_3:61286902-61286921 | None:intergenic | 45.0% | |
| TAGTTGGAGTAGAACTGAGC+GGG | - | chr4_3:61286986-61287005 | None:intergenic | 45.0% | |
| TTGGTCAATCATTTCGCCAG+TGG | - | chr4_3:61287212-61287231 | None:intergenic | 45.0% | |
| CAGCTTATGAATTGCAGTGC+GGG | - | chr4_3:61287374-61287393 | None:intergenic | 45.0% | |
| TGGACGAACAGTCCTGTTAT+TGG | + | chr4_3:61287660-61287679 | Msa0653320:intron | 45.0% | |
| ! | ATTGGTAGTTGTGTGCTTGC+TGG | + | chr4_3:61287678-61287697 | Msa0653320:intron | 45.0% |
| GCGTATATGCATTCTTGGAG+AGG | - | chr4_3:61287884-61287903 | None:intergenic | 45.0% | |
| ! | CAGGTTGGACAAGTTAAGTG+TGG | + | chr4_3:61288048-61288067 | Msa0653320:CDS | 45.0% |
| !! | TAACTTGTGGAGCACCGTAT+GGG | - | chr4_3:61288098-61288117 | None:intergenic | 45.0% |
| !! | TGCCGGTTTGTGACAGAAAT+CGG | + | chr4_3:61288129-61288148 | Msa0653320:CDS | 45.0% |
| ATCATCAATCCCCCTACACT+TGG | - | chr4_3:61288441-61288460 | None:intergenic | 45.0% | |
| TTGAATGAATAGAGGCGGGT+GGG | - | chr4_3:61288498-61288517 | None:intergenic | 45.0% | |
| ATTGAATGAATAGAGGCGGG+TGG | - | chr4_3:61288499-61288518 | None:intergenic | 45.0% | |
| CTGCCTGCACAAAAATCATG+AGG | - | chr4_3:61288599-61288618 | None:intergenic | 45.0% | |
| ! | CTTTGTTGTACAGACCATGG+AGG | - | chr4_3:61288633-61288652 | None:intergenic | 45.0% |
| AAACCAACTCCTCCCAAATC+TGG | + | chr4_3:61288654-61288673 | Msa0653320:CDS | 45.0% | |
| CTCCCAAATCTGGTTGTTAG+CGG | + | chr4_3:61288664-61288683 | Msa0653320:CDS | 45.0% | |
| AAAAGAAAAGGGATCACGGG+AGG | - | chr4_3:61288851-61288870 | None:intergenic | 45.0% | |
| TTGACATGTTTGGCACCTGG+TGG | - | chr4_3:61285866-61285885 | None:intergenic | 50.0% | |
| CCAGTCCTGACATGGTATCA+GGG | - | chr4_3:61286079-61286098 | None:intergenic | 50.0% | |
| TCCAGTCCTGACATGGTATC+AGG | - | chr4_3:61286080-61286099 | None:intergenic | 50.0% | |
| GATGAAGATACGACCCCTGA+AGG | + | chr4_3:61286098-61286117 | Msa0653320:intron | 50.0% | |
| ! | AACTGGGGTGTTACCTTCAG+GGG | - | chr4_3:61286114-61286133 | None:intergenic | 50.0% |
| ! | GGCTGGAGCTTTGATAACTG+GGG | - | chr4_3:61286129-61286148 | None:intergenic | 50.0% |
| ! | CTGGCTGGAGCTTTGATAAC+TGG | - | chr4_3:61286131-61286150 | None:intergenic | 50.0% |
| GTATTTAGCCTCCTCAGCAG+TGG | - | chr4_3:61286375-61286394 | None:intergenic | 50.0% | |
| !! | GAGCATTGAGCAATAGGGTG+AGG | - | chr4_3:61286538-61286557 | None:intergenic | 50.0% |
| TCAATGCTCTCAAGCCGACT+CGG | + | chr4_3:61286549-61286568 | Msa0653320:intron | 50.0% | |
| GGAATGAGAATGGAGCTGTC+AGG | - | chr4_3:61286587-61286606 | None:intergenic | 50.0% | |
| TAGGTGGTTCCAAAATGGGG+TGG | - | chr4_3:61286621-61286640 | None:intergenic | 50.0% | |
| CCGTCTAGGTGGTTCCAAAA+TGG | - | chr4_3:61286626-61286645 | None:intergenic | 50.0% | |
| !!! | ACGTTCTAGGACGGCCATTT+TGG | + | chr4_3:61286759-61286778 | Msa0653320:intron | 50.0% |
| !!! | GGCCATTTTGGCTACTTGAC+TGG | + | chr4_3:61286771-61286790 | Msa0653320:intron | 50.0% |
| GCGTTAGGCACGACATTGTT+TGG | - | chr4_3:61286932-61286951 | None:intergenic | 50.0% | |
| CAACTCAAGACCTGCTGCAA+TGG | + | chr4_3:61287144-61287163 | Msa0653320:intron | 50.0% | |
| TGGCATGAGCCATGAGTTCT+TGG | - | chr4_3:61287231-61287250 | None:intergenic | 50.0% | |
| AGACCCGCCATTGACAAAAG+AGG | + | chr4_3:61287270-61287289 | Msa0653320:intron | 50.0% | |
| TTCCTTCGTCACAGCTGATC+AGG | + | chr4_3:61288029-61288048 | Msa0653320:intron | 50.0% | |
| AACCTGATCAGCTGTGACGA+AGG | - | chr4_3:61288034-61288053 | None:intergenic | 50.0% | |
| TTCGTCACAGCTGATCAGGT+TGG | + | chr4_3:61288033-61288052 | Msa0653320:intron | 50.0% | |
| !! | CTAACTTGTGGAGCACCGTA+TGG | - | chr4_3:61288099-61288118 | None:intergenic | 50.0% |
| CATACGGTGCTCCACAAGTT+AGG | + | chr4_3:61288097-61288116 | Msa0653320:CDS | 50.0% | |
| !! | GCCGGTTTGTGACAGAAATC+GGG | + | chr4_3:61288130-61288149 | Msa0653320:CDS | 50.0% |
| CCCCGATTTCTGTCACAAAC+CGG | - | chr4_3:61288134-61288153 | None:intergenic | 50.0% | |
| ! | CCGGTTTGTGACAGAAATCG+GGG | + | chr4_3:61288131-61288150 | Msa0653320:CDS | 50.0% |
| TTGTGCAGGCAGACAACAAG+CGG | + | chr4_3:61288607-61288626 | Msa0653320:intron | 50.0% | |
| CAACCAGATTTGGGAGGAGT+TGG | - | chr4_3:61288660-61288679 | None:intergenic | 50.0% | |
| CGCTAACAACCAGATTTGGG+AGG | - | chr4_3:61288666-61288685 | None:intergenic | 50.0% | |
| GGCCGCTAACAACCAGATTT+GGG | - | chr4_3:61288669-61288688 | None:intergenic | 50.0% | |
| AGGCCGCTAACAACCAGATT+TGG | - | chr4_3:61288670-61288689 | None:intergenic | 50.0% | |
| ATAGGTTGCCAACCAGGTGG+CGG | - | chr4_3:61285501-61285520 | None:intergenic | 55.0% | |
| GGAATAGGTTGCCAACCAGG+TGG | - | chr4_3:61285504-61285523 | None:intergenic | 55.0% | |
| AACTGACCGGATGGGAGTGA+CGG | - | chr4_3:61285555-61285574 | None:intergenic | 55.0% | |
| ! | CTGGTGGATACGAAAGCAGG+CGG | - | chr4_3:61285850-61285869 | None:intergenic | 55.0% |
| ! | CACCTGGTGGATACGAAAGC+AGG | - | chr4_3:61285853-61285872 | None:intergenic | 55.0% |
| CCCTGATACCATGTCAGGAC+TGG | + | chr4_3:61286076-61286095 | Msa0653320:intron | 55.0% | |
| TGAAAAGGACGGAGGTCTGC+TGG | - | chr4_3:61286150-61286169 | None:intergenic | 55.0% | |
| ! | GCAGACCTCCGTCCTTTTCA+AGG | + | chr4_3:61286150-61286169 | Msa0653320:intron | 55.0% |
| GTGGTCCTTGAAAAGGACGG+AGG | - | chr4_3:61286158-61286177 | None:intergenic | 55.0% | |
| GGGATTGTTGGGTCCACGAA+TGG | - | chr4_3:61286234-61286253 | None:intergenic | 55.0% | |
| ! | CAGCAGTGGTGGAGTTCCAA+TGG | - | chr4_3:61286361-61286380 | None:intergenic | 55.0% |
| TTGGAACTCCACCACTGCTG+AGG | + | chr4_3:61286361-61286380 | Msa0653320:intron | 55.0% | |
| TTTAGCCTCCTCAGCAGTGG+TGG | - | chr4_3:61286372-61286391 | None:intergenic | 55.0% | |
| CCTGCAAGCCTCTCTGTTTG+AGG | - | chr4_3:61286441-61286460 | None:intergenic | 55.0% | |
| CCTCAAACAGAGAGGCTTGC+AGG | + | chr4_3:61286438-61286457 | Msa0653320:intron | 55.0% | |
| ! | CAATGCTCTCAAGCCGACTC+GGG | + | chr4_3:61286550-61286569 | Msa0653320:intron | 55.0% |
| ! | ACTCTTCAGCGCACTGATGC+AGG | + | chr4_3:61286688-61286707 | Msa0653320:intron | 55.0% |
| TGGCCGTCCTAGAACGTCAT+TGG | - | chr4_3:61286756-61286775 | None:intergenic | 55.0% | |
| TGGAGCTAGGTGTGGAGTAC+AGG | - | chr4_3:61286882-61286901 | None:intergenic | 55.0% | |
| TCATCGCTTGGAGCTAGGTG+TGG | - | chr4_3:61286890-61286909 | None:intergenic | 55.0% | |
| TCGGCTGTATCCATTGCAGC+AGG | - | chr4_3:61287157-61287176 | None:intergenic | 55.0% | |
| GCTGCAATGGATACAGCCGA+AGG | + | chr4_3:61287157-61287176 | Msa0653320:intron | 55.0% | |
| ATGGATACAGCCGAAGGCTC+AGG | + | chr4_3:61287163-61287182 | Msa0653320:intron | 55.0% | |
| AACGGCTTGTCCTGAGCCTT+CGG | - | chr4_3:61287176-61287195 | None:intergenic | 55.0% | |
| AGTGGCGCGAAATGGGACAA+CGG | - | chr4_3:61287194-61287213 | None:intergenic | 55.0% | |
| TTTCGCCAGTGGCGCGAAAT+GGG | - | chr4_3:61287201-61287220 | None:intergenic | 55.0% | |
| ATTTCGCCAGTGGCGCGAAA+TGG | - | chr4_3:61287202-61287221 | None:intergenic | 55.0% | |
| TAGGTTGCCAACCAGGTGGC+GGG | - | chr4_3:61285500-61285519 | None:intergenic | 60.0% | |
| GGGGGAATAGGTTGCCAACC+AGG | - | chr4_3:61285507-61285526 | None:intergenic | 60.0% | |
| CGCCTGCTTTCGTATCCACC+AGG | + | chr4_3:61285848-61285867 | Msa0653320:CDS | 60.0% | |
| GAACTCCACCACTGCTGAGG+AGG | + | chr4_3:61286364-61286383 | Msa0653320:intron | 60.0% | |
| !! | GGGCCAGGTTGATGTCATCC+TGG | - | chr4_3:61286844-61286863 | None:intergenic | 60.0% |
| GTTGTCCCATTTCGCGCCAC+TGG | + | chr4_3:61287193-61287212 | Msa0653320:intron | 60.0% | |
| CAGACAACAAGCGGCCTCCA+TGG | + | chr4_3:61288616-61288635 | Msa0653320:CDS | 60.0% | |
| GGGATCACGGGAGGAACAGA+AGG | - | chr4_3:61288842-61288861 | None:intergenic | 60.0% | |
| TGACCGGATGGGAGTGACGG+TGG | - | chr4_3:61285552-61285571 | None:intergenic | 65.0% | |
| AAGGACGGAGGTCTGCTGGC+TGG | - | chr4_3:61286146-61286165 | None:intergenic | 65.0% | |
| !! | CTCAAGCCGACTCGGGTCAC+TGG | + | chr4_3:61286557-61286576 | Msa0653320:intron | 65.0% |
| GGCGTTCCAGTGACCCGAGT+CGG | - | chr4_3:61286566-61286585 | None:intergenic | 65.0% | |
| ! | GGGCGTTGCGGTGGGGGAAT+AGG | - | chr4_3:61285519-61285538 | None:intergenic | 70.0% |
| TTCCCCCACCGCAACGCCCA+CGG | + | chr4_3:61285520-61285539 | Msa0653320:CDS | 70.0% | |
| ! | GATGGGAGTGACGGTGGCGG+TGG | - | chr4_3:61285546-61285565 | None:intergenic | 70.0% |
| CCGGATGGGAGTGACGGTGG+CGG | - | chr4_3:61285549-61285568 | None:intergenic | 70.0% | |
| CCGCCACCGTCACTCCCATC+CGG | + | chr4_3:61285546-61285565 | Msa0653320:CDS | 70.0% | |
| ACGACGGCCCGCCACCTGGT+TGG | + | chr4_3:61285490-61285509 | Msa0653320:CDS | 75.0% | |
| ! | TGGCCGTGGGCGTTGCGGTG+GGG | - | chr4_3:61285526-61285545 | None:intergenic | 75.0% |
| ! | GTGGCCGTGGGCGTTGCGGT+GGG | - | chr4_3:61285527-61285546 | None:intergenic | 75.0% |
| ! | GTGACGGTGGCGGTGGCCGT+GGG | - | chr4_3:61285539-61285558 | None:intergenic | 75.0% |
| ! | AGTGACGGTGGCGGTGGCCG+TGG | - | chr4_3:61285540-61285559 | None:intergenic | 75.0% |
| ! | GACGACGACGGCCCGCCACC+TGG | + | chr4_3:61285486-61285505 | Msa0653320:CDS | 80.0% |
| !! | GGCCGTGGGCGTTGCGGTGG+GGG | - | chr4_3:61285525-61285544 | None:intergenic | 80.0% |
| !! | GGTGGCCGTGGGCGTTGCGG+TGG | - | chr4_3:61285528-61285547 | None:intergenic | 80.0% |
| !! | GGCGGTGGCCGTGGGCGTTG+CGG | - | chr4_3:61285531-61285550 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 61285358 | 61289027 | 61285358 | ID=Msa0653320;Name=Msa0653320 |
| chr4_3 | mRNA | 61285358 | 61289027 | 61285358 | ID=Msa0653320-mRNA-1;Parent=Msa0653320;Name=Msa0653320-mRNA-1;_AED=0.15;_eAED=0.15;_QI=95|1|1|1|0.5|0.4|5|309|133 |
| chr4_3 | exon | 61285358 | 61285567 | 61285358 | ID=Msa0653320-mRNA-1:exon:16743;Parent=Msa0653320-mRNA-1 |
| chr4_3 | exon | 61285816 | 61285923 | 61285816 | ID=Msa0653320-mRNA-1:exon:16744;Parent=Msa0653320-mRNA-1 |
| chr4_3 | exon | 61288043 | 61288152 | 61288043 | ID=Msa0653320-mRNA-1:exon:16745;Parent=Msa0653320-mRNA-1 |
| chr4_3 | exon | 61288615 | 61288903 | 61288615 | ID=Msa0653320-mRNA-1:exon:16746;Parent=Msa0653320-mRNA-1 |
| chr4_3 | exon | 61288939 | 61289027 | 61288939 | ID=Msa0653320-mRNA-1:exon:16747;Parent=Msa0653320-mRNA-1 |
| chr4_3 | five_prime_UTR | 61285358 | 61285452 | 61285358 | ID=Msa0653320-mRNA-1:five_prime_utr;Parent=Msa0653320-mRNA-1 |
| chr4_3 | CDS | 61285453 | 61285567 | 61285453 | ID=Msa0653320-mRNA-1:cds;Parent=Msa0653320-mRNA-1 |
| chr4_3 | CDS | 61285816 | 61285923 | 61285816 | ID=Msa0653320-mRNA-1:cds;Parent=Msa0653320-mRNA-1 |
| chr4_3 | CDS | 61288043 | 61288152 | 61288043 | ID=Msa0653320-mRNA-1:cds;Parent=Msa0653320-mRNA-1 |
| chr4_3 | CDS | 61288615 | 61288683 | 61288615 | ID=Msa0653320-mRNA-1:cds;Parent=Msa0653320-mRNA-1 |
| chr4_3 | three_prime_UTR | 61288684 | 61288903 | 61288684 | ID=Msa0653320-mRNA-1:three_prime_utr;Parent=Msa0653320-mRNA-1 |
| chr4_3 | three_prime_UTR | 61288939 | 61289027 | 61288939 | ID=Msa0653320-mRNA-1:three_prime_utr;Parent=Msa0653320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
