AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0930820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0930820 MtrunA17_Chr8g0391711 98.704 540 5 1 1 540 1 538 0.0 1094
Msa0930820 MtrunA17_Chr1g0161231 76.710 541 115 4 1 540 1 531 0.0 857
Msa0930820 MtrunA17_Chr4g0030551 46.341 451 228 5 56 496 61 507 2.30e-130 390
Msa0930820 MtrunA17_Chr2g0327711 40.782 537 285 7 14 540 31 544 5.22e-129 387
Msa0930820 MtrunA17_Chr7g0276681 44.286 490 253 8 56 540 72 546 2.89e-127 383
Msa0930820 MtrunA17_Chr1g0212971 41.667 528 288 6 18 540 81 593 1.71e-125 380
Msa0930820 MtrunA17_Chr7g0263421 43.636 495 259 5 54 540 38 520 7.59e-125 375
Msa0930820 MtrunA17_Chr7g0263471 38.258 528 300 7 18 540 76 582 3.44e-103 322
Msa0930820 MtrunA17_Chr2g0331191 24.943 441 256 9 100 470 138 573 9.28e-35 138
Msa0930820 MtrunA17_Chr2g0331201 23.570 437 261 7 100 468 138 569 2.32e-24 107
Msa0930820 MtrunA17_Chr2g0331201 21.591 352 197 9 41 318 10 356 3.55e-12 68.9
Msa0930820 MtrunA17_Chr5g0439351 23.789 454 293 10 49 469 252 685 1.55e-15 79.7
Msa0930820 MtrunA17_Chr8g0367671 23.362 351 213 7 103 422 47 372 2.13e-15 78.6
Msa0930820 MtrunA17_Chr8g0361991 24.585 301 182 6 103 382 46 322 2.73e-15 78.2
Msa0930820 MtrunA17_Chr3g0122941 25.874 286 167 8 14 276 109 372 7.50e-14 74.3
Msa0930820 MtrunA17_Chr8g0370361 24.138 290 183 5 103 380 46 310 8.05e-14 73.6
Msa0930820 MtrunA17_Chr8g0353311 25.086 291 182 8 103 380 49 316 1.48e-13 72.8
Msa0930820 MtrunA17_Chr1g0178581 26.351 296 169 9 103 380 47 311 3.23e-13 71.6
Msa0930820 MtrunA17_Chr7g0221531 27.907 215 133 5 103 304 44 249 5.82e-13 70.9
Msa0930820 MtrunA17_Chr8g0369921 25.234 214 140 3 103 304 45 250 3.64e-12 68.6
Msa0930820 MtrunA17_Chr5g0439361 23.958 384 247 12 115 469 1 368 6.30e-12 67.8
Msa0930820 MtrunA17_Chr7g0233331 21.552 348 217 8 103 420 44 365 8.48e-12 67.0
Msa0930820 MtrunA17_Chr7g0262731 26.291 213 145 5 103 304 44 255 5.46e-11 65.1
Msa0930820 MtrunA17_Chr3g0083331 22.000 300 188 5 103 380 45 320 6.55e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0930820 AT2G01680.1 69.131 541 157 5 1 540 1 532 0.0 741
Msa0930820 AT1G07710.2 44.841 504 260 8 47 540 48 543 3.17e-128 385
Msa0930820 AT1G07710.1 44.841 504 260 8 47 540 48 543 3.17e-128 385
Msa0930820 AT2G31820.1 42.752 545 279 9 2 540 145 662 1.38e-124 380
Msa0930820 AT5G60070.1 42.801 507 258 8 21 515 43 529 3.31e-121 367
Msa0930820 AT1G05640.1 44.848 495 256 8 54 540 142 627 3.96e-120 367
Msa0930820 AT3G12360.2 40.190 525 296 6 18 540 70 578 2.89e-116 356
Msa0930820 AT3G12360.1 40.190 525 296 6 18 540 82 590 4.79e-116 356
Msa0930820 AT5G02620.4 42.324 482 249 5 24 492 27 492 2.84e-115 352
Msa0930820 AT5G02620.1 42.324 482 249 5 24 492 27 492 2.84e-115 352
Msa0930820 AT5G02620.3 42.324 482 249 5 24 492 27 492 2.84e-115 352
Msa0930820 AT3G09550.2 40.000 525 300 8 18 540 103 614 7.70e-112 345
Msa0930820 AT3G09550.1 40.000 525 300 8 18 540 96 607 1.11e-111 345
Msa0930820 AT3G09550.3 40.000 525 300 8 18 540 96 607 1.11e-111 345
Msa0930820 AT5G02620.5 40.594 505 248 6 24 492 27 515 1.48e-110 340
Msa0930820 AT5G02620.2 40.594 505 248 6 24 492 27 515 1.48e-110 340
Msa0930820 AT5G54710.1 27.105 487 311 12 57 506 94 573 6.64e-39 150
Msa0930820 AT5G54710.2 27.105 487 311 12 57 506 139 618 1.20e-38 150
Msa0930820 AT1G34050.1 26.020 392 264 8 112 494 162 536 1.01e-33 135
Msa0930820 AT2G24600.3 21.861 462 311 9 56 485 96 539 7.25e-31 127
Msa0930820 AT2G24600.4 21.861 462 311 9 56 485 96 539 7.25e-31 127
Msa0930820 AT1G10340.1 22.326 430 290 10 56 459 96 507 2.43e-25 110
Msa0930820 AT1G10340.2 22.526 475 276 11 67 459 39 503 4.93e-25 109
Msa0930820 AT5G51160.1 27.273 341 202 10 131 438 44 371 1.59e-22 100
Msa0930820 AT5G54700.2 24.716 352 206 10 163 505 26 327 5.45e-22 97.8
Msa0930820 AT4G03460.2 24.768 323 206 5 105 422 205 495 1.35e-21 99.0
Msa0930820 AT4G03460.1 24.768 323 206 5 105 422 237 527 1.52e-21 99.0
Msa0930820 AT1G03670.1 23.266 447 300 7 56 492 171 584 2.35e-21 98.2
Msa0930820 AT4G03500.1 22.353 425 283 7 62 477 212 598 4.67e-20 94.4
Msa0930820 AT4G03500.2 22.353 425 283 7 62 477 189 575 7.08e-20 94.0
Msa0930820 AT4G03500.3 22.353 425 283 7 62 477 189 575 7.08e-20 94.0
Msa0930820 AT4G10720.2 24.781 343 218 10 103 429 40 358 6.82e-19 89.4
Msa0930820 AT2G24600.2 23.416 363 234 8 56 392 96 440 8.52e-19 90.1
Msa0930820 AT2G24600.1 23.416 363 234 8 56 392 96 440 8.52e-19 90.1
Msa0930820 AT4G10720.1 28.509 228 147 4 103 316 40 265 1.09e-18 89.4
Msa0930820 AT4G03490.4 22.889 450 310 12 49 476 128 562 4.51e-18 88.2
Msa0930820 AT4G03490.5 22.889 450 310 12 49 476 118 552 4.59e-18 88.2
Msa0930820 AT4G03490.2 23.356 441 281 11 49 476 108 504 7.66e-18 87.4
Msa0930820 AT4G03490.3 22.889 450 310 12 49 476 128 562 8.89e-18 87.4
Msa0930820 AT4G03490.1 23.356 441 281 11 49 476 118 514 9.01e-18 87.4
Msa0930820 AT5G50140.1 23.094 446 280 14 65 456 27 463 3.94e-17 84.7
Msa0930820 AT4G03440.1 22.362 398 285 7 105 498 318 695 8.35e-17 84.3
Msa0930820 AT4G03440.2 22.362 398 285 7 105 498 311 688 1.03e-16 84.0
Msa0930820 AT4G03440.3 22.362 398 285 7 105 498 311 688 1.03e-16 84.0
Msa0930820 AT5G54700.1 31.126 151 100 2 343 489 200 350 3.02e-16 82.0
Msa0930820 AT4G03480.2 24.138 377 245 9 60 422 307 656 2.45e-15 79.7
Msa0930820 AT4G03480.1 24.138 377 245 9 60 422 310 659 2.95e-15 79.3
Msa0930820 AT3G04140.1 28.472 288 174 7 14 276 106 386 8.93e-15 77.8
Msa0930820 AT5G15500.2 23.393 389 208 9 100 424 2 364 1.00e-14 77.0
Msa0930820 AT4G14390.2 22.014 427 291 8 56 472 220 614 3.30e-14 75.9
Msa0930820 AT4G14390.4 22.014 427 291 8 56 472 239 633 4.49e-14 75.5
Msa0930820 AT5G54610.1 24.199 281 183 6 103 372 40 301 4.82e-14 74.7
Msa0930820 AT1G14480.1 27.826 230 148 5 103 316 40 267 1.48e-13 73.2
Msa0930820 AT4G14390.1 23.077 364 244 7 111 472 305 634 2.26e-13 73.6
Msa0930820 AT5G54620.1 25.806 186 126 2 103 276 40 225 5.32e-13 71.6
Msa0930820 AT3G01750.2 25.161 310 170 9 14 286 109 393 2.61e-11 66.6
Msa0930820 AT3G01750.1 25.161 310 170 9 14 286 109 393 2.61e-11 66.6

Find 131 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATGTGGTAAATGCTATTT+TGG 0.194879 6_2:-79925796 Msa0930820:CDS
AAAACTCGCCGACGAGTTTC+CGG 0.220434 6_2:-79924607 Msa0930820:CDS
CATATTCTGAAAGTGCTTCT+TGG 0.231591 6_2:+79924737 None:intergenic
GCTATTACCATAACTGGTTT+AGG 0.239123 6_2:-79924199 Msa0930820:CDS
TTGTGCCTGGCAAACTCTTT+AGG 0.251798 6_2:-79923640 Msa0930820:three_prime_UTR
TTTCGCCTCAATAGCATTCT+TGG 0.274513 6_2:-79924506 Msa0930820:CDS
GATAATTGTTAAAACTGATT+TGG 0.277074 6_2:+79923927 None:intergenic
CAAGAAGCACTTTCAGAATA+TGG 0.283596 6_2:-79924736 Msa0930820:CDS
TGTTTCTTGTTGCTTGTTGA+TGG 0.288345 6_2:+79924810 None:intergenic
TTGGACTGCGGCAGCATATA+GGG 0.294971 6_2:+79925827 None:intergenic
TGGATGGCTATTACCATAAC+TGG 0.303698 6_2:-79924205 Msa0930820:CDS
CTATTACCATAACTGGTTTA+GGG 0.304499 6_2:-79924198 Msa0930820:CDS
ATCACATAATTTGATCAAAA+AGG 0.308077 6_2:+79926537 None:intergenic
AACCACTGTGACAGAGTTAA+TGG 0.309857 6_2:+79924537 None:intergenic
ATGTATGTATATGTGATAAA+AGG 0.312602 6_2:-79923566 Msa0930820:three_prime_UTR
TCTTTGATGCAAACTATTCC+TGG 0.318592 6_2:+79925663 None:intergenic
CTTGGCTATATTCAATTTGC+CGG 0.319423 6_2:-79924488 Msa0930820:CDS
ATGGAATTAATGCTAATATA+TGG 0.325782 6_2:+79926992 None:intergenic
CTTGGACTGCGGCAGCATAT+AGG 0.333630 6_2:+79925826 None:intergenic
AGGAAAGTTCTTGTCGATAA+TGG 0.336622 6_2:+79923797 None:intergenic
TATATGGATGATGATGATTA+TGG 0.347087 6_2:+79927008 None:intergenic
TTCAAATCACTTTGGTAGCT+TGG 0.363305 6_2:-79924345 Msa0930820:CDS
TTACCACATCCAAGTGATCT+TGG 0.370317 6_2:+79925808 None:intergenic
GAAGGAAAATAGAGAGAGAA+TGG 0.381582 6_2:+79926973 None:intergenic
ATCTACAATATGGTGCTATC+AGG 0.389170 6_2:+79923777 None:intergenic
GATCCTCTACATCTACAATA+TGG 0.395256 6_2:+79923767 None:intergenic
GCCAGAGTCCCAACTAGAAT+TGG 0.405803 6_2:+79924172 None:intergenic
GCACTTATTGTCCGTGATCC+AGG 0.413807 6_2:-79925681 Msa0930820:CDS
GCTGGATCTGGAGACCTTGA+TGG 0.415271 6_2:-79926730 Msa0930820:CDS
TCAAATCACTTTGGTAGCTT+GGG 0.417875 6_2:-79924344 Msa0930820:CDS
CTGCACTACATAATGCTGTT+AGG 0.423394 6_2:-79925728 Msa0930820:CDS
ATCTTCAGTGTTATATTTCG+TGG 0.425507 6_2:+79923962 None:intergenic
TTTCAATTCCTTAGCTATAC+CGG 0.426970 6_2:+79924588 None:intergenic
ATATTCACCACAGCTGGATC+TGG 0.428365 6_2:-79926742 Msa0930820:CDS
AGGTCAAACTGCGCTACATA+TGG 0.431611 6_2:-79925634 Msa0930820:CDS
TCTCGTTCGTTCAATATAGT+AGG 0.439653 6_2:+79925561 None:intergenic
ACTGTTAGAGAAGCTTAATA+AGG 0.441562 6_2:-79926698 Msa0930820:CDS
TAGGGATACCAATTCTAGTT+GGG 0.446369 6_2:-79924180 Msa0930820:CDS
CCCTGGTTTCAGTTAAAAGC+TGG 0.447205 6_2:+79923731 None:intergenic
TGGTATCCCTAAACCAGTTA+TGG 0.456752 6_2:+79924192 None:intergenic
TGCGTCTCTGCGAATCACTT+TGG 0.457508 6_2:+79924107 None:intergenic
GAAGATGGTGATAGAAGTAA+TGG 0.458453 6_2:-79926673 Msa0930820:CDS
AGTGATAACGTTTCCTTACC+AGG 0.461223 6_2:-79923698 Msa0930820:three_prime_UTR
TTCAGTTAAAAGCTGGAAGC+AGG 0.461440 6_2:+79923738 None:intergenic
GCAGCTAAGCGTGGCCATCT+TGG 0.468196 6_2:-79926463 Msa0930820:intron
ATTATGAAAGGATCACATAT+AGG 0.475016 6_2:-79924457 Msa0930820:CDS
AAGCTTAATAAGGAAGAAGA+TGG 0.476184 6_2:-79926688 Msa0930820:CDS
TTAGGGATACCAATTCTAGT+TGG 0.478692 6_2:-79924181 Msa0930820:CDS
GATGATTATGGATGGATGGA+TGG 0.484895 6_2:+79927020 None:intergenic
AAGATCTATGCTTTGTAAGC+TGG 0.491359 6_2:-79923998 Msa0930820:exon
ATTGAACGAACGAGATAAGA+AGG 0.492542 6_2:-79925553 Msa0930820:CDS
CAATCAATATTCACCACAGC+TGG 0.492782 6_2:-79926748 Msa0930820:CDS
ACAGTTTCTTCAACCCATCA+AGG 0.495729 6_2:+79926716 None:intergenic
GGAAGCACGTCTCTTGTACA+TGG 0.499454 6_2:+79923513 None:intergenic
AGACGCATCAAGAGAGCAAG+TGG 0.505968 6_2:-79924091 Msa0930820:CDS
TTAGCAGATAAACTGCCATA+TGG 0.506840 6_2:-79924778 Msa0930820:CDS
CTTTGGTAGCTTGGGACACA+AGG 0.509015 6_2:-79924336 Msa0930820:CDS
CAATAAGTGCTTTCACAATA+CGG 0.511144 6_2:+79925694 None:intergenic
TCTAAAGCTGACGATCCATA+TGG 0.511646 6_2:+79924763 None:intergenic
TATCACTAGGGTAACTCCCC+TGG 0.517183 6_2:+79923714 None:intergenic
CCGGGTCAATATATTATGAA+AGG 0.520442 6_2:-79924469 Msa0930820:CDS
TACGCGGAAAGGCCGGTCAC+AGG 0.521929 6_2:-79925508 Msa0930820:intron
CTACATAATGCTGTTAGGTA+TGG 0.523561 6_2:-79925723 Msa0930820:CDS
CTTCACATGGCTACGCGGAA+AGG 0.523901 6_2:-79925519 Msa0930820:CDS
GTCACACAACTTACAAACCT+CGG 0.525962 6_2:+79925866 None:intergenic
CTGTTGTTAACAAGCTAATG+TGG 0.526218 6_2:-79924294 Msa0930820:CDS
GTATATGTGATAAAAGGAAA+AGG 0.528554 6_2:-79923560 Msa0930820:three_prime_UTR
CTGGATCTGGAGACCTTGAT+GGG 0.530769 6_2:-79926729 Msa0930820:CDS
AGAATGCTATTGAGGCGAAA+AGG 0.530984 6_2:+79924509 None:intergenic
AACATCATCTTCATCTATGT+CGG 0.533622 6_2:-79926644 Msa0930820:CDS
ACCAATTCTAGTTGGGACTC+TGG 0.534427 6_2:-79924173 Msa0930820:CDS
ACATGGCTACGCGGAAAGGC+CGG 0.534860 6_2:-79925515 Msa0930820:CDS
GCAAACCTAAAGAGTTTGCC+AGG 0.541237 6_2:+79923635 None:intergenic
TGATGATGATTATGGATGGA+TGG 0.541650 6_2:+79927016 None:intergenic
ACAGAGTACATCAGTGGTGG+AGG 0.543153 6_2:-79925601 Msa0930820:CDS
GGTAAGGAAACGTTATCACT+AGG 0.545262 6_2:+79923701 None:intergenic
TTGGCTATATTCAATTTGCC+GGG 0.547911 6_2:-79924487 Msa0930820:CDS
CTGTGGTGAATATTGATTGG+TGG 0.549448 6_2:+79926752 None:intergenic
ATAACTAGAGAGATGAATCC+TGG 0.550549 6_2:+79923680 None:intergenic
CAACTTACAAACCTCGGGCC+AGG 0.555562 6_2:+79925872 None:intergenic
TATAGCCAAGAATGCTATTG+AGG 0.559760 6_2:+79924501 None:intergenic
TAGAGAGATGAATCCTGGTA+AGG 0.559946 6_2:+79923685 None:intergenic
GAAGCACGTCTCTTGTACAT+GGG 0.560799 6_2:+79923514 None:intergenic
TCTAACATTGCGGATCATGT+TGG 0.560863 6_2:-79924430 Msa0930820:CDS
GCTAAATATGCAAGACATGT+TGG 0.561894 6_2:-79924712 Msa0930820:CDS
GTGGAAGCAAATCCTTCTCA+TGG 0.564022 6_2:-79924072 Msa0930820:CDS
TCACACAACTTACAAACCTC+GGG 0.565097 6_2:+79925867 None:intergenic
TGCGGCAGCATATAGGGGAC+TGG 0.565490 6_2:+79925833 None:intergenic
AAGATGGTGATAGAAGTAAT+GGG 0.566107 6_2:-79926672 Msa0930820:CDS
ATCCAAGTGATCTTGGACTG+CGG 0.566122 6_2:+79925815 None:intergenic
TGCCGCAGTCCAAGATCACT+TGG 0.567594 6_2:-79925817 Msa0930820:CDS
CAAGCAACAAGAAACAGCCT+TGG 0.570473 6_2:-79924803 Msa0930820:CDS
TGTTGTTGTTCAAATCACTT+TGG 0.570912 6_2:-79924353 Msa0930820:CDS
TGGACTGCGGCAGCATATAG+GGG 0.571980 6_2:+79925828 None:intergenic
CAGCTGTGGTGAATATTGAT+TGG 0.574642 6_2:+79926749 None:intergenic
TAGCTATACCGGAAACTCGT+CGG 0.577902 6_2:+79924599 None:intergenic
ATGTCTCTTCAAAATGATCA+TGG 0.578765 6_2:-79926610 Msa0930820:CDS
GCGCTACATATGGCTGTCAA+AGG 0.582666 6_2:-79925624 Msa0930820:CDS
GAATGAGTTTAACCTGTGAC+CGG 0.583506 6_2:+79925496 None:intergenic
GGGTAATACCGCTCTTCACA+TGG 0.583634 6_2:-79925532 Msa0930820:CDS
CCTTTCATAATATATTGACC+CGG 0.584046 6_2:+79924469 None:intergenic
TTTCATGTTGCAGCTAAGCG+TGG 0.587939 6_2:-79926472 Msa0930820:CDS
GCACCATATTGTAGATGTAG+AGG 0.589254 6_2:-79923770 Msa0930820:three_prime_UTR
TTTGCTAAGCTATGCAGCTG+TGG 0.589326 6_2:-79924842 Msa0930820:CDS
GCTGCTTGTGCTTGCACGTG+CGG 0.591233 6_2:-79924271 Msa0930820:CDS
ACGAGTTTCCGGTATAGCTA+AGG 0.593408 6_2:-79924596 Msa0930820:CDS
AGCTGCACACAATAATCTCA+AGG 0.604525 6_2:-79926569 Msa0930820:CDS
TGTGGTGAATATTGATTGGT+GGG 0.604833 6_2:+79926753 None:intergenic
AGTCCAAGATCACTTGGATG+TGG 0.606081 6_2:-79925811 Msa0930820:CDS
GTAAGGAAACGTTATCACTA+GGG 0.612504 6_2:+79923702 None:intergenic
CAGTTTATCTGCTAAATCCA+AGG 0.614223 6_2:+79924786 None:intergenic
ATGATTATGGATGGATGGAT+GGG 0.614356 6_2:+79927021 None:intergenic
TGGTAAAGTAGATGAAGCCA+TGG 0.615814 6_2:-79924692 Msa0930820:CDS
CCGCTCTTCACATGGCTACG+CGG 0.621597 6_2:-79925524 Msa0930820:CDS
TGGATGATGATGATTATGGA+TGG 0.622028 6_2:+79927012 None:intergenic
TTGAACGAACGAGATAAGAA+GGG 0.622382 6_2:-79925552 Msa0930820:CDS
TGCAAACTATTCCTGGATCA+CGG 0.623341 6_2:+79925670 None:intergenic
TTGTGTGCAGCTATGTAAAG+TGG 0.624900 6_2:+79926580 None:intergenic
GAATAAGTAGAATACCAAGA+TGG 0.625558 6_2:+79926449 None:intergenic
TGTTGTTAACAAGCTAATGT+GGG 0.633610 6_2:-79924293 Msa0930820:CDS
TGCAGAGTAAGACCATGAGA+AGG 0.634865 6_2:+79924060 None:intergenic
TTTGGTAGCTTGGGACACAA+GGG 0.645817 6_2:-79924335 Msa0930820:CDS
AGGACAGAGTACATCAGTGG+TGG 0.646873 6_2:-79925604 Msa0930820:CDS
AGTGAGTGATATAAAGCATG+AGG 0.658021 6_2:-79924656 Msa0930820:CDS
CACCATTAACTCTGTCACAG+TGG 0.670427 6_2:-79924539 Msa0930820:CDS
AAGCACGTCTCTTGTACATG+GGG 0.679778 6_2:+79923515 None:intergenic
CCGCGTAGCCATGTGAAGAG+CGG 0.680358 6_2:+79925524 None:intergenic
GGATGGGTGCAACAAACAAG+TGG 0.687910 6_2:+79927037 None:intergenic
CAAAGGACAGAGTACATCAG+TGG 0.688738 6_2:-79925607 Msa0930820:CDS
AAGGTCTCCAGATCCAGCTG+TGG 0.699168 6_2:+79926735 None:intergenic
TATAGGAGAATCTAACATTG+CGG 0.704490 6_2:-79924440 Msa0930820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTGTTTTTTTTGTGA+TGG - chr6_2:79923744-79923763 Msa0930820:three_prime_UTR 15.0%
!! ATTAATGAACTTTACAATTA+AGG + chr6_2:79924299-79924318 None:intergenic 15.0%
!!! ATTTTTTCTAACTATAAACA+TGG + chr6_2:79924789-79924808 None:intergenic 15.0%
!! ATGTTTATAGTTAGAAAAAA+TGG - chr6_2:79924788-79924807 Msa0930820:CDS 15.0%
!! TGTTTATAGTTAGAAAAAAT+GGG - chr6_2:79924789-79924808 Msa0930820:CDS 15.0%
!!! AAGTTATAATCATTTTGATT+TGG - chr6_2:79926651-79926670 Msa0930820:CDS 15.0%
!!! ATAATTTTATAATGTATCAG+TGG - chr6_2:79926709-79926728 Msa0930820:CDS 15.0%
!! ATGGAATTAATGCTAATATA+TGG + chr6_2:79923555-79923574 None:intergenic 20.0%
!! ATCACATAATTTGATCAAAA+AGG + chr6_2:79924010-79924029 None:intergenic 20.0%
!!! TTTCTTTTTTTCTTTTGTGT+TGG - chr6_2:79924124-79924143 Msa0930820:CDS 20.0%
!!! TGTTGTACATCTTTTAAATT+TGG - chr6_2:79924423-79924442 Msa0930820:CDS 20.0%
!! GATAATTGTTAAAACTGATT+TGG + chr6_2:79926620-79926639 None:intergenic 20.0%
!! ATGTATGTATATGTGATAAA+AGG - chr6_2:79926978-79926997 Msa0930820:five_prime_UTR 20.0%
!! TATATGGATGATGATGATTA+TGG + chr6_2:79923539-79923558 None:intergenic 25.0%
! AAATATTAAGAACCTGTGTT+TGG - chr6_2:79924159-79924178 Msa0930820:CDS 25.0%
!! TGTTTGGATATTGCTATTAT+TGG - chr6_2:79924175-79924194 Msa0930820:CDS 25.0%
! TTTGGATAAAGATTGTTTCA+GGG - chr6_2:79924244-79924263 Msa0930820:CDS 25.0%
! CTTACATTGCATAATTGTAA+TGG - chr6_2:79924532-79924551 Msa0930820:CDS 25.0%
!!! AAGATTGTAACATTTGCTAT+CGG + chr6_2:79924565-79924584 None:intergenic 25.0%
! GTTTGCATCAAAGATAAAAA+AGG - chr6_2:79924890-79924909 Msa0930820:intron 25.0%
! AAAGAATCTACAACTATACA+TGG + chr6_2:79925081-79925100 None:intergenic 25.0%
! CAATACTAGTTAATTACAAC+TGG - chr6_2:79925424-79925443 Msa0930820:intron 25.0%
! AGGCTCATTTATATACATAA+TGG - chr6_2:79925556-79925575 Msa0930820:CDS 25.0%
! AAAGACAAGCAAATTATGAA+AGG + chr6_2:79925602-79925621 None:intergenic 25.0%
! CAACAAAAATACAAAATGAG+AGG + chr6_2:79925642-79925661 None:intergenic 25.0%
! ATTATGAAAGGATCACATAT+AGG - chr6_2:79926087-79926106 Msa0930820:intron 25.0%
!!! TTTGTTTTTCGACAACATTT+TGG - chr6_2:79926408-79926427 Msa0930820:intron 25.0%
! GTATATGTGATAAAAGGAAA+AGG - chr6_2:79926984-79927003 Msa0930820:five_prime_UTR 25.0%
AATGAAGAAGAAGAAGAAGA+AGG + chr6_2:79923592-79923611 None:intergenic 30.0%
ACTGTTAGAGAAGCTTAATA+AGG - chr6_2:79923846-79923865 Msa0930820:three_prime_UTR 30.0%
AAGCTTAATAAGGAAGAAGA+TGG - chr6_2:79923856-79923875 Msa0930820:three_prime_UTR 30.0%
AAGATGGTGATAGAAGTAAT+GGG - chr6_2:79923872-79923891 Msa0930820:three_prime_UTR 30.0%
AACATCATCTTCATCTATGT+CGG - chr6_2:79923900-79923919 Msa0930820:three_prime_UTR 30.0%
ATGTCTCTTCAAAATGATCA+TGG - chr6_2:79923934-79923953 Msa0930820:three_prime_UTR 30.0%
GAATAAGTAGAATACCAAGA+TGG + chr6_2:79924098-79924117 None:intergenic 30.0%
TAATAGCAATATCCAAACAC+AGG + chr6_2:79924174-79924193 None:intergenic 30.0%
TATTATTGGATGAACTGTGT+TGG - chr6_2:79924189-79924208 Msa0930820:CDS 30.0%
! TGGTTCTATTACTCATAATC+CGG - chr6_2:79924209-79924228 Msa0930820:CDS 30.0%
GTTTGGATAAAGATTGTTTC+AGG - chr6_2:79924243-79924262 Msa0930820:CDS 30.0%
TTCAATTACACGAAGTTTCA+GGG - chr6_2:79924327-79924346 Msa0930820:CDS 30.0%
TCTACTTACTAGGATAGAAT+TGG - chr6_2:79924497-79924516 Msa0930820:CDS 30.0%
!!! ACTTTTTTCCAGATATTGTG+AGG - chr6_2:79924636-79924655 Msa0930820:CDS 30.0%
!!! CTTTTTTCCAGATATTGTGA+GGG - chr6_2:79924637-79924656 Msa0930820:CDS 30.0%
CAATAAGTGCTTTCACAATA+CGG + chr6_2:79924853-79924872 None:intergenic 30.0%
AATTTCATGTTAAACGTCGT+TGG - chr6_2:79925314-79925333 Msa0930820:intron 30.0%
TAAGGAATGAGGATAGTTTA+GGG + chr6_2:79925529-79925548 None:intergenic 30.0%
ATAAGGAATGAGGATAGTTT+AGG + chr6_2:79925530-79925549 None:intergenic 30.0%
TAAATGAGCCTCAACTAATA+AGG + chr6_2:79925547-79925566 None:intergenic 30.0%
TTGTTGTCTTTACTGACAAA+TGG - chr6_2:79925656-79925675 Msa0930820:CDS 30.0%
TTTCAATTCCTTAGCTATAC+CGG + chr6_2:79925959-79925978 None:intergenic 30.0%
CCTTTCATAATATATTGACC+CGG + chr6_2:79926078-79926097 None:intergenic 30.0%
TATAGGAGAATCTAACATTG+CGG - chr6_2:79926104-79926123 Msa0930820:intron 30.0%
! TGTTGTTGTTCAAATCACTT+TGG - chr6_2:79926191-79926210 Msa0930820:intron 30.0%
TGTTGTTAACAAGCTAATGT+GGG - chr6_2:79926251-79926270 Msa0930820:intron 30.0%
AGGTTGTTGGAAAGAAAAAA+TGG - chr6_2:79926319-79926338 Msa0930820:intron 30.0%
TGTTGGAAAGAAAAAATGGA+TGG - chr6_2:79926323-79926342 Msa0930820:intron 30.0%
! CTATTACCATAACTGGTTTA+GGG - chr6_2:79926346-79926365 Msa0930820:intron 30.0%
ATCTTCAGTGTTATATTTCG+TGG + chr6_2:79926585-79926604 None:intergenic 30.0%
ATTTGGTAAAAATGCTGATG+AGG - chr6_2:79926668-79926687 Msa0930820:CDS 30.0%
! AGTTATCAGCTTGAAGTTTT+AGG - chr6_2:79926881-79926900 Msa0930820:five_prime_UTR 30.0%
ATGATTATGGATGGATGGAT+GGG + chr6_2:79923526-79923545 None:intergenic 35.0%
! TGATGATGATTATGGATGGA+TGG + chr6_2:79923531-79923550 None:intergenic 35.0%
! TGGATGATGATGATTATGGA+TGG + chr6_2:79923535-79923554 None:intergenic 35.0%
GAAGGAAAATAGAGAGAGAA+TGG + chr6_2:79923574-79923593 None:intergenic 35.0%
!!! ACTGTTTTAGCTTTGAGTTG+AGG + chr6_2:79923678-79923697 None:intergenic 35.0%
!!! TTTTTTTGTGATGGAGTCGA+AGG - chr6_2:79923753-79923772 Msa0930820:three_prime_UTR 35.0%
!!! TTTTTTGTGATGGAGTCGAA+GGG - chr6_2:79923754-79923773 Msa0930820:three_prime_UTR 35.0%
! TGTGGTGAATATTGATTGGT+GGG + chr6_2:79923794-79923813 None:intergenic 35.0%
GAAGATGGTGATAGAAGTAA+TGG - chr6_2:79923871-79923890 Msa0930820:three_prime_UTR 35.0%
TCATAATCCGGAGTTAAGTA+AGG - chr6_2:79924221-79924240 Msa0930820:CDS 35.0%
ATCCAAACCTTACTTAACTC+CGG + chr6_2:79924231-79924250 None:intergenic 35.0%
AAGATTGTTTCAGGGTTCTA+AGG - chr6_2:79924252-79924271 Msa0930820:CDS 35.0%
GTTCAATTACACGAAGTTTC+AGG - chr6_2:79924326-79924345 Msa0930820:CDS 35.0%
CATGTGAAGATCTACTTACT+AGG - chr6_2:79924487-79924506 Msa0930820:CDS 35.0%
AAAATCTCCCTCACAATATC+TGG + chr6_2:79924647-79924666 None:intergenic 35.0%
!! GGATGTGGTAAATGCTATTT+TGG - chr6_2:79924748-79924767 Msa0930820:CDS 35.0%
CTACATAATGCTGTTAGGTA+TGG - chr6_2:79924821-79924840 Msa0930820:CDS 35.0%
TCTTTGATGCAAACTATTCC+TGG + chr6_2:79924884-79924903 None:intergenic 35.0%
TCTCGTTCGTTCAATATAGT+AGG + chr6_2:79924986-79925005 None:intergenic 35.0%
ATTGAACGAACGAGATAAGA+AGG - chr6_2:79924991-79925010 Msa0930820:intron 35.0%
TTGAACGAACGAGATAAGAA+GGG - chr6_2:79924992-79925011 Msa0930820:intron 35.0%
AAGTTGTTTATCCGAGATGA+TGG - chr6_2:79925142-79925161 Msa0930820:intron 35.0%
! CTTGGATTTTTCCATCATCT+CGG + chr6_2:79925156-79925175 None:intergenic 35.0%
TGGAAAAATCCAAGATTTCC+TGG - chr6_2:79925162-79925181 Msa0930820:intron 35.0%
TCATTCATTCCAGGAAATCT+TGG + chr6_2:79925174-79925193 None:intergenic 35.0%
GATTTCCTGGAATGAATGAT+AGG - chr6_2:79925175-79925194 Msa0930820:intron 35.0%
ATGCTTGAACTTCTTCCTAT+AGG - chr6_2:79925242-79925261 Msa0930820:intron 35.0%
ATCAACTGTTAAGTGCCTAT+AGG + chr6_2:79925260-79925279 None:intergenic 35.0%
! TAACTAGTATTGAGAACTCG+TGG + chr6_2:79925416-79925435 None:intergenic 35.0%
!!! GGTCTTGGATTTTAAAGCAT+AGG - chr6_2:79925462-79925481 Msa0930820:intron 35.0%
GGCTGTGTAAATTTAAGCTA+TGG - chr6_2:79925483-79925502 Msa0930820:intron 35.0%
TCCTCATTCCTTATTAGTTG+AGG - chr6_2:79925536-79925555 Msa0930820:CDS 35.0%
! TGTTTCTTGTTGCTTGTTGA+TGG + chr6_2:79925737-79925756 None:intergenic 35.0%
CAGTTTATCTGCTAAATCCA+AGG + chr6_2:79925761-79925780 None:intergenic 35.0%
TTAGCAGATAAACTGCCATA+TGG - chr6_2:79925766-79925785 Msa0930820:CDS 35.0%
!! CATATTCTGAAAGTGCTTCT+TGG + chr6_2:79925810-79925829 None:intergenic 35.0%
!! CAAGAAGCACTTTCAGAATA+TGG - chr6_2:79925808-79925827 Msa0930820:CDS 35.0%
GCTAAATATGCAAGACATGT+TGG - chr6_2:79925832-79925851 Msa0930820:CDS 35.0%
!!! CACTGTTCTTTTAAGTTCCA+TGG + chr6_2:79925872-79925891 None:intergenic 35.0%
AGTGAGTGATATAAAGCATG+AGG - chr6_2:79925888-79925907 Msa0930820:CDS 35.0%
TATAGCCAAGAATGCTATTG+AGG + chr6_2:79926046-79926065 None:intergenic 35.0%
CTTGGCTATATTCAATTTGC+CGG - chr6_2:79926056-79926075 Msa0930820:intron 35.0%
TTGGCTATATTCAATTTGCC+GGG - chr6_2:79926057-79926076 Msa0930820:intron 35.0%
CCGGGTCAATATATTATGAA+AGG - chr6_2:79926075-79926094 Msa0930820:intron 35.0%
! TTCAAATCACTTTGGTAGCT+TGG - chr6_2:79926199-79926218 Msa0930820:intron 35.0%
! TCAAATCACTTTGGTAGCTT+GGG - chr6_2:79926200-79926219 Msa0930820:intron 35.0%
CTGTTGTTAACAAGCTAATG+TGG - chr6_2:79926250-79926269 Msa0930820:intron 35.0%
!!! TTTTTTGGCAATCGCTTTTG+AGG - chr6_2:79926299-79926318 Msa0930820:intron 35.0%
! GCTATTACCATAACTGGTTT+AGG - chr6_2:79926345-79926364 Msa0930820:intron 35.0%
TTAGGGATACCAATTCTAGT+TGG - chr6_2:79926363-79926382 Msa0930820:intron 35.0%
! TAGGGATACCAATTCTAGTT+GGG - chr6_2:79926364-79926383 Msa0930820:intron 35.0%
AAGATCTATGCTTTGTAAGC+TGG - chr6_2:79926546-79926565 Msa0930820:CDS 35.0%
AGGAAAGTTCTTGTCGATAA+TGG + chr6_2:79926750-79926769 None:intergenic 35.0%
!! ATCTACAATATGGTGCTATC+AGG + chr6_2:79926770-79926789 None:intergenic 35.0%
GATCCTCTACATCTACAATA+TGG + chr6_2:79926780-79926799 None:intergenic 35.0%
GTAAGGAAACGTTATCACTA+GGG + chr6_2:79926845-79926864 None:intergenic 35.0%
ATAACTAGAGAGATGAATCC+TGG + chr6_2:79926867-79926886 None:intergenic 35.0%
GATGATTATGGATGGATGGA+TGG + chr6_2:79923527-79923546 None:intergenic 40.0%
! CTGTGGTGAATATTGATTGG+TGG + chr6_2:79923795-79923814 None:intergenic 40.0%
CAGCTGTGGTGAATATTGAT+TGG + chr6_2:79923798-79923817 None:intergenic 40.0%
CAATCAATATTCACCACAGC+TGG - chr6_2:79923796-79923815 Msa0930820:three_prime_UTR 40.0%
ACAGTTTCTTCAACCCATCA+AGG + chr6_2:79923831-79923850 None:intergenic 40.0%
TTGTGTGCAGCTATGTAAAG+TGG + chr6_2:79923967-79923986 None:intergenic 40.0%
AGCTGCACACAATAATCTCA+AGG - chr6_2:79923975-79923994 Msa0930820:three_prime_UTR 40.0%
ATCCGGAGTTAAGTAAGGTT+TGG - chr6_2:79924226-79924245 Msa0930820:CDS 40.0%
TCACACAACTTACAAACCTC+GGG + chr6_2:79924680-79924699 None:intergenic 40.0%
GTCACACAACTTACAAACCT+CGG + chr6_2:79924681-79924700 None:intergenic 40.0%
TTACCACATCCAAGTGATCT+TGG + chr6_2:79924739-79924758 None:intergenic 40.0%
CTGCACTACATAATGCTGTT+AGG - chr6_2:79924816-79924835 Msa0930820:CDS 40.0%
TGCAAACTATTCCTGGATCA+CGG + chr6_2:79924877-79924896 None:intergenic 40.0%
GAATGAGTTTAACCTGTGAC+CGG + chr6_2:79925051-79925070 None:intergenic 40.0%
TCCTGGAATGAATGATAGGA+AGG - chr6_2:79925179-79925198 Msa0930820:intron 40.0%
TCCTTCCTATCATTCATTCC+AGG + chr6_2:79925183-79925202 None:intergenic 40.0%
!! AACTGGAAGCATCATATCAC+TGG - chr6_2:79925441-79925460 Msa0930820:intron 40.0%
! AAGCATCATATCACTGGTCT+TGG - chr6_2:79925447-79925466 Msa0930820:intron 40.0%
GCCTCAACTAATAAGGAATG+AGG + chr6_2:79925540-79925559 None:intergenic 40.0%
! TCTAAAGCTGACGATCCATA+TGG + chr6_2:79925784-79925803 None:intergenic 40.0%
TGGTAAAGTAGATGAAGCCA+TGG - chr6_2:79925852-79925871 Msa0930820:CDS 40.0%
AACCACTGTGACAGAGTTAA+TGG + chr6_2:79926010-79926029 None:intergenic 40.0%
AGAATGCTATTGAGGCGAAA+AGG + chr6_2:79926038-79926057 None:intergenic 40.0%
TTTCGCCTCAATAGCATTCT+TGG - chr6_2:79926038-79926057 Msa0930820:intron 40.0%
TCTAACATTGCGGATCATGT+TGG - chr6_2:79926114-79926133 Msa0930820:intron 40.0%
TGGATGGCTATTACCATAAC+TGG - chr6_2:79926339-79926358 Msa0930820:intron 40.0%
TGGTATCCCTAAACCAGTTA+TGG + chr6_2:79926355-79926374 None:intergenic 40.0%
GCACCATATTGTAGATGTAG+AGG - chr6_2:79926774-79926793 Msa0930820:CDS 40.0%
TTCAGTTAAAAGCTGGAAGC+AGG + chr6_2:79926809-79926828 None:intergenic 40.0%
!! TCCAGCTTTTAACTGAAACC+AGG - chr6_2:79926812-79926831 Msa0930820:five_prime_UTR 40.0%
!! CCAGCTTTTAACTGAAACCA+GGG - chr6_2:79926813-79926832 Msa0930820:five_prime_UTR 40.0%
!! CAGCTTTTAACTGAAACCAG+GGG - chr6_2:79926814-79926833 Msa0930820:five_prime_UTR 40.0%
GGTAAGGAAACGTTATCACT+AGG + chr6_2:79926846-79926865 None:intergenic 40.0%
! AGTGATAACGTTTCCTTACC+AGG - chr6_2:79926846-79926865 Msa0930820:five_prime_UTR 40.0%
TAGAGAGATGAATCCTGGTA+AGG + chr6_2:79926862-79926881 None:intergenic 40.0%
!!! TTGAAGTTTTAGGTTGTGCC+TGG - chr6_2:79926891-79926910 Msa0930820:five_prime_UTR 40.0%
ATATTCACCACAGCTGGATC+TGG - chr6_2:79923802-79923821 Msa0930820:three_prime_UTR 45.0%
TTTCATGTTGCAGCTAAGCG+TGG - chr6_2:79924072-79924091 Msa0930820:CDS 45.0%
ATCCAAGTGATCTTGGACTG+CGG + chr6_2:79924732-79924751 None:intergenic 45.0%
AGTCCAAGATCACTTGGATG+TGG - chr6_2:79924733-79924752 Msa0930820:CDS 45.0%
AGGTCAAACTGCGCTACATA+TGG - chr6_2:79924910-79924929 Msa0930820:intron 45.0%
CAAAGGACAGAGTACATCAG+TGG - chr6_2:79924937-79924956 Msa0930820:intron 45.0%
TTTGCTAAGCTATGCAGCTG+TGG - chr6_2:79925702-79925721 Msa0930820:CDS 45.0%
CAAGCAACAAGAAACAGCCT+TGG - chr6_2:79925741-79925760 Msa0930820:CDS 45.0%
TAGCTATACCGGAAACTCGT+CGG + chr6_2:79925948-79925967 None:intergenic 45.0%
ACGAGTTTCCGGTATAGCTA+AGG - chr6_2:79925948-79925967 Msa0930820:intron 45.0%
CACCATTAACTCTGTCACAG+TGG - chr6_2:79926005-79926024 Msa0930820:intron 45.0%
! TTTGGTAGCTTGGGACACAA+GGG - chr6_2:79926209-79926228 Msa0930820:intron 45.0%
!!! GCAATCGCTTTTGAGGTTGT+TGG - chr6_2:79926306-79926325 Msa0930820:intron 45.0%
! ACCAATTCTAGTTGGGACTC+TGG - chr6_2:79926371-79926390 Msa0930820:intron 45.0%
GTGGAAGCAAATCCTTCTCA+TGG - chr6_2:79926472-79926491 Msa0930820:CDS 45.0%
TGCAGAGTAAGACCATGAGA+AGG + chr6_2:79926487-79926506 None:intergenic 45.0%
CCCTGGTTTCAGTTAAAAGC+TGG + chr6_2:79926816-79926835 None:intergenic 45.0%
TTGTGCCTGGCAAACTCTTT+AGG - chr6_2:79926904-79926923 Msa0930820:five_prime_UTR 45.0%
GCAAACCTAAAGAGTTTGCC+AGG + chr6_2:79926912-79926931 None:intergenic 45.0%
AAGCACGTCTCTTGTACATG+GGG + chr6_2:79927032-79927051 None:intergenic 45.0%
GAAGCACGTCTCTTGTACAT+GGG + chr6_2:79927033-79927052 None:intergenic 45.0%
!!! TATGATTTTTATTATTTTTT+TGG + chr6_2:79923711-79923730 None:intergenic 5.0%
CTGGATCTGGAGACCTTGAT+GGG - chr6_2:79923815-79923834 Msa0930820:three_prime_UTR 50.0%
! TGAGGGAGATTTTGTGTGCC+TGG - chr6_2:79924654-79924673 Msa0930820:CDS 50.0%
TTGGACTGCGGCAGCATATA+GGG + chr6_2:79924720-79924739 None:intergenic 50.0%
GCACTTATTGTCCGTGATCC+AGG - chr6_2:79924863-79924882 Msa0930820:intron 50.0%
GCGCTACATATGGCTGTCAA+AGG - chr6_2:79924920-79924939 Msa0930820:intron 50.0%
AGGACAGAGTACATCAGTGG+TGG - chr6_2:79924940-79924959 Msa0930820:intron 50.0%
ACAGAGTACATCAGTGGTGG+AGG - chr6_2:79924943-79924962 Msa0930820:intron 50.0%
GGGTAATACCGCTCTTCACA+TGG - chr6_2:79925012-79925031 Msa0930820:intron 50.0%
AAAACTCGCCGACGAGTTTC+CGG - chr6_2:79925937-79925956 Msa0930820:intron 50.0%
! CTTTGGTAGCTTGGGACACA+AGG - chr6_2:79926208-79926227 Msa0930820:intron 50.0%
GCCAGAGTCCCAACTAGAAT+TGG + chr6_2:79926375-79926394 None:intergenic 50.0%
TGCGTCTCTGCGAATCACTT+TGG + chr6_2:79926440-79926459 None:intergenic 50.0%
AGACGCATCAAGAGAGCAAG+TGG - chr6_2:79926453-79926472 Msa0930820:intron 50.0%
TATCACTAGGGTAACTCCCC+TGG + chr6_2:79926833-79926852 None:intergenic 50.0%
! GGAAGCACGTCTCTTGTACA+TGG + chr6_2:79927034-79927053 None:intergenic 50.0%
AAGGTCTCCAGATCCAGCTG+TGG + chr6_2:79923812-79923831 None:intergenic 55.0%
GCTGGATCTGGAGACCTTGA+TGG - chr6_2:79923814-79923833 Msa0930820:three_prime_UTR 55.0%
CAACTTACAAACCTCGGGCC+AGG + chr6_2:79924675-79924694 None:intergenic 55.0%
TGGACTGCGGCAGCATATAG+GGG + chr6_2:79924719-79924738 None:intergenic 55.0%
CTTGGACTGCGGCAGCATAT+AGG + chr6_2:79924721-79924740 None:intergenic 55.0%
TGCCGCAGTCCAAGATCACT+TGG - chr6_2:79924727-79924746 Msa0930820:CDS 55.0%
CTTCACATGGCTACGCGGAA+AGG - chr6_2:79925025-79925044 Msa0930820:intron 55.0%
GAGAACTCGTGGAACGTACG+AGG + chr6_2:79925405-79925424 None:intergenic 55.0%
!!! TTGCACGTGCGGCGCTTTTT+TGG - chr6_2:79926284-79926303 Msa0930820:intron 55.0%
GCAGCTAAGCGTGGCCATCT+TGG - chr6_2:79924081-79924100 Msa0930820:CDS 60.0%
! GATTTTGTGTGCCTGGCCCG+AGG - chr6_2:79924661-79924680 Msa0930820:CDS 60.0%
TGCGGCAGCATATAGGGGAC+TGG + chr6_2:79924714-79924733 None:intergenic 60.0%
CCGCGTAGCCATGTGAAGAG+CGG + chr6_2:79925023-79925042 None:intergenic 60.0%
CCGCTCTTCACATGGCTACG+CGG - chr6_2:79925020-79925039 Msa0930820:intron 60.0%
ACATGGCTACGCGGAAAGGC+CGG - chr6_2:79925029-79925048 Msa0930820:intron 60.0%
GCTGCTTGTGCTTGCACGTG+CGG - chr6_2:79926273-79926292 Msa0930820:intron 60.0%
TACGCGGAAAGGCCGGTCAC+AGG - chr6_2:79925036-79925055 Msa0930820:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 79923510 79927056 79923510 ID=Msa0930820;Name=Msa0930820
chr6_2 mRNA 79923510 79927056 79923510 ID=Msa0930820-mRNA-1;Parent=Msa0930820;Name=Msa0930820-mRNA-1;_AED=0.02;_eAED=0.02;_QI=253|1|1|1|1|1|3|493|540
chr6_2 exon 79923510 79924875 79923510 ID=Msa0930820-mRNA-1:exon:13968;Parent=Msa0930820-mRNA-1
chr6_2 exon 79925509 79925918 79925509 ID=Msa0930820-mRNA-1:exon:13967;Parent=Msa0930820-mRNA-1
chr6_2 exon 79926464 79927056 79926464 ID=Msa0930820-mRNA-1:exon:13966;Parent=Msa0930820-mRNA-1
chr6_2 five_prime_UTR 79926804 79927056 79926804 ID=Msa0930820-mRNA-1:five_prime_utr;Parent=Msa0930820-mRNA-1
chr6_2 CDS 79926464 79926803 79926464 ID=Msa0930820-mRNA-1:cds;Parent=Msa0930820-mRNA-1
chr6_2 CDS 79925509 79925918 79925509 ID=Msa0930820-mRNA-1:cds;Parent=Msa0930820-mRNA-1
chr6_2 CDS 79924003 79924875 79924003 ID=Msa0930820-mRNA-1:cds;Parent=Msa0930820-mRNA-1
chr6_2 three_prime_UTR 79923510 79924002 79923510 ID=Msa0930820-mRNA-1:three_prime_utr;Parent=Msa0930820-mRNA-1
Gene Sequence

>Msa0930820

ATGGAGTCGAAGGGTCTGCGTTTCATGACCCACCAATCAATATTCACCACAGCTGGATCTGGAGACCTTGATGGGTTGAAGAAACTGTTAGAGAAGCTTAATAAGGAAGAAGATGGTGATAGAAGTAATGGGTCATCAACATCATCTTCATCTATGTCGGTTTCTGATGTTATGTCTCTTCAAAATGATCATGGTGAAACACCACTTTACATAGCTGCACACAATAATCTCAAGGAAGTTTTCACCTTTTTGATCAAATTATGTGATTTTGAAGTTGTCAAGATTCGTTCTAAGTCTGATATGAACGCTTTTCATGTTGCAGCTAAGCGTGGCCATCTTGATATTGTGAGGGAGATTTTGTGTGCCTGGCCCGAGGTTTGTAAGTTGTGTGACTCGACAAACACCAGTCCCCTATATGCTGCCGCAGTCCAAGATCACTTGGATGTGGTAAATGCTATTTTGGATGTTGATGTCAGCTCCATGTTTATAGTTAGAAAAAATGGGAAAACTGCACTACATAATGCTGTTAGGTATGGCGTCGACCGTATTGTGAAAGCACTTATTGTCCGTGATCCAGGAATAGTTTGCATCAAAGATAAAAAAGGTCAAACTGCGCTACATATGGCTGTCAAAGGACAGAGTACATCAGTGGTGGAGGAGATATTACAAGCTGATCCTACTATATTGAACGAACGAGATAAGAAGGGTAATACCGCTCTTCACATGGCTACGCGGAAAGGCCGGTCACAGATAGTGAGCTATTTGCTAAGCTATGCAGCTGTGGATGTTAATGCCATCAACAAGCAACAAGAAACAGCCTTGGATTTAGCAGATAAACTGCCATATGGATCGTCAGCTTTAGAAATCCAAGAAGCACTTTCAGAATATGGTGCTAAATATGCAAGACATGTTGGTAAAGTAGATGAAGCCATGGAACTTAAAAGAACAGTGAGTGATATAAAGCATGAGGTGCAGTCACAGCTCATACAAAACGAAAAAACTCGCCGACGAGTTTCCGGTATAGCTAAGGAATTGAAAAAACTTCATAGAGAAGCTGTTCAAAACACCATTAACTCTGTCACAGTGGTTGCTGTCCTTTTCGCCTCAATAGCATTCTTGGCTATATTCAATTTGCCGGGTCAATATATTATGAAAGGATCACATATAGGAGAATCTAACATTGCGGATCATGTTGGATTTCAAATTTTCTGTCTCTTGAATTCGACGTCTCTTTTCATTTCTCTTGCAGTTGTTGTTGTTCAAATCACTTTGGTAGCTTGGGACACAAGGGCTCAAAAGCAGATCGTGTCTGTTGTTAACAAGCTAATGTGGGCTGCTTGTGCTTGCACGTGCGGCGCTTTTTTGGCAATCGCTTTTGAGGTTGTTGGAAAGAAAAAATGGATGGCTATTACCATAACTGGTTTAGGGATACCAATTCTAGTTGGGACTCTGGCAAGCATGTGCTACTTTGTTTTTCGACAACATTTTGGCATTTTCCAAAGTGATTCGCAGAGACGCATCAAGAGAGCAAGTGGAAGCAAATCCTTCTCATGGTCTTACTCTGCAAATATATCAGATATAGACGAATACACTTCAGACATTGAGAAGATCTATGCTTTGTAA

Protein sequence

>Msa0930820

MESKGLRFMTHQSIFTTAGSGDLDGLKKLLEKLNKEEDGDRSNGSSTSSSSMSVSDVMSLQNDHGETPLYIAAHNNLKEVFTFLIKLCDFEVVKIRSKSDMNAFHVAAKRGHLDIVREILCAWPEVCKLCDSTNTSPLYAAAVQDHLDVVNAILDVDVSSMFIVRKNGKTALHNAVRYGVDRIVKALIVRDPGIVCIKDKKGQTALHMAVKGQSTSVVEEILQADPTILNERDKKGNTALHMATRKGRSQIVSYLLSYAAVDVNAINKQQETALDLADKLPYGSSALEIQEALSEYGAKYARHVGKVDEAMELKRTVSDIKHEVQSQLIQNEKTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYIMKGSHIGESNIADHVGFQIFCLLNSTSLFISLAVVVVQITLVAWDTRAQKQIVSVVNKLMWAACACTCGAFLAIAFEVVGKKKWMAITITGLGIPILVGTLASMCYFVFRQHFGIFQSDSQRRIKRASGSKSFSWSYSANISDIDEYTSDIEKIYAL*