Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435070 | RHN70535.1 | 97.912 | 431 | 9 | 0 | 1 | 431 | 1 | 431 | 0.0 | 871 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435070 | sp|A0MFS5|WTF1_ARATH | 36.504 | 389 | 208 | 9 | 17 | 386 | 56 | 424 | 2.00e-58 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435070 | A0A396J2B4 | 97.912 | 431 | 9 | 0 | 1 | 431 | 1 | 431 | 0.0 | 871 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008220 | Msa1435070 | 0.809186 | 2.142938e-50 | -8.615850e-47 |
| Msa0031820 | Msa1435070 | 0.803619 | 3.197117e-49 | -8.615850e-47 |
| Msa0035120 | Msa1435070 | 0.824078 | 9.807165e-54 | -8.615850e-47 |
| Msa0041720 | Msa1435070 | 0.826003 | 3.442981e-54 | -8.615850e-47 |
| Msa0043500 | Msa1435070 | 0.815734 | 7.943200e-52 | -8.615850e-47 |
| Msa0043650 | Msa1435070 | 0.803212 | 3.881985e-49 | -8.615850e-47 |
| Msa0054820 | Msa1435070 | 0.803059 | 4.176781e-49 | -8.615850e-47 |
| Msa0056450 | Msa1435070 | 0.827574 | 1.451172e-54 | -8.615850e-47 |
| Msa0057370 | Msa1435070 | 0.826675 | 2.382021e-54 | -8.615850e-47 |
| Msa0058600 | Msa1435070 | 0.803492 | 3.397335e-49 | -8.615850e-47 |
| Msa0070170 | Msa1435070 | 0.800147 | 1.651909e-48 | -8.615850e-47 |
| Msa0104700 | Msa1435070 | 0.842034 | 3.308366e-58 | -8.615850e-47 |
| Msa0108390 | Msa1435070 | 0.829823 | 4.148053e-55 | -8.615850e-47 |
| Msa0112270 | Msa1435070 | 0.810906 | 9.130253e-51 | -8.615850e-47 |
| Msa0115090 | Msa1435070 | 0.802654 | 5.062876e-49 | -8.615850e-47 |
| Msa1365760 | Msa1435070 | 0.801632 | 8.217048e-49 | -8.615850e-47 |
| Msa1382790 | Msa1435070 | 0.804182 | 2.442168e-49 | -8.615850e-47 |
| Msa1410420 | Msa1435070 | 0.830082 | 3.586878e-55 | -8.615850e-47 |
| Msa1418240 | Msa1435070 | 0.829158 | 6.018086e-55 | -8.615850e-47 |
| Msa1420250 | Msa1435070 | 0.814061 | 1.865933e-51 | -8.615850e-47 |
| Msa1435070 | Msa1435080 | 0.834558 | 2.795753e-56 | -8.615850e-47 |
| Msa1435070 | Msa1435400 | 0.800295 | 1.540813e-48 | -8.615850e-47 |
| Msa1435070 | Msa1439700 | 0.997489 | 1.917075e-243 | -8.615850e-47 |
| Msa1435070 | Msa1439710 | 0.871366 | 7.218776e-67 | -8.615850e-47 |
| Msa1435070 | Msa1446780 | 0.837347 | 5.483033e-57 | -8.615850e-47 |
| Msa1435070 | Msa1453360 | 0.806447 | 8.191328e-50 | -8.615850e-47 |
| Msa1435070 | Msa1454530 | 0.830842 | 2.338673e-55 | -8.615850e-47 |
| Msa0615010 | Msa1435070 | 0.812230 | 4.707576e-51 | -8.615850e-47 |
| Msa0615220 | Msa1435070 | 0.812267 | 4.619396e-51 | -8.615850e-47 |
| Msa0620620 | Msa1435070 | 0.818666 | 1.740224e-52 | -8.615850e-47 |
| Msa0637900 | Msa1435070 | 0.803585 | 3.249470e-49 | -8.615850e-47 |
| Msa0638350 | Msa1435070 | 0.804102 | 2.538330e-49 | -8.615850e-47 |
| Msa0638360 | Msa1435070 | 0.808539 | 2.947661e-50 | -8.615850e-47 |
| Msa0640500 | Msa1435070 | 0.807730 | 4.381531e-50 | -8.615850e-47 |
| Msa0648240 | Msa1435070 | -0.809914 | 1.495088e-50 | -8.615850e-47 |
| Msa0661320 | Msa1435070 | 0.819802 | 9.591923e-53 | -8.615850e-47 |
| Msa0664970 | Msa1435070 | 0.807966 | 3.904914e-50 | -8.615850e-47 |
| Msa0679100 | Msa1435070 | 0.803990 | 2.677228e-49 | -8.615850e-47 |
| Msa0689760 | Msa1435070 | 0.814327 | 1.630107e-51 | -8.615850e-47 |
| Msa0706400 | Msa1435070 | 0.801301 | 9.606618e-49 | -8.615850e-47 |
| Msa0716860 | Msa1435070 | 0.824444 | 8.044055e-54 | -8.615850e-47 |
| Msa0723990 | Msa1435070 | 0.815351 | 9.665689e-52 | -8.615850e-47 |
| Msa0741070 | Msa1435070 | 0.808201 | 3.479089e-50 | -8.615850e-47 |
| Msa0751260 | Msa1435070 | 0.845822 | 3.195356e-59 | -8.615850e-47 |
| Msa0753770 | Msa1435070 | 0.813123 | 3.002007e-51 | -8.615850e-47 |
| Msa0756380 | Msa1435070 | 0.806720 | 7.172535e-50 | -8.615850e-47 |
| Msa0757800 | Msa1435070 | 0.817947 | 2.531841e-52 | -8.615850e-47 |
| Msa0760560 | Msa1435070 | 0.804796 | 1.818700e-49 | -8.615850e-47 |
| Msa0763920 | Msa1435070 | 0.805277 | 1.442978e-49 | -8.615850e-47 |
| Msa0764570 | Msa1435070 | 0.802507 | 5.429177e-49 | -8.615850e-47 |
| Msa0770360 | Msa1435070 | 0.814949 | 1.187034e-51 | -8.615850e-47 |
| Msa0784410 | Msa1435070 | 0.805900 | 1.067682e-49 | -8.615850e-47 |
| Msa0787150 | Msa1435070 | 0.807563 | 4.756109e-50 | -8.615850e-47 |
| Msa0789100 | Msa1435070 | 0.812455 | 4.202701e-51 | -8.615850e-47 |
| Msa0795070 | Msa1435070 | 0.830660 | 2.591821e-55 | -8.615850e-47 |
| Msa0797770 | Msa1435070 | 0.813434 | 2.564598e-51 | -8.615850e-47 |
| Msa0800700 | Msa1435070 | 0.812950 | 3.274677e-51 | -8.615850e-47 |
| Msa0805430 | Msa1435070 | 0.800643 | 1.308758e-48 | -8.615850e-47 |
| Msa0817460 | Msa1435070 | 0.806009 | 1.012785e-49 | -8.615850e-47 |
| Msa0821800 | Msa1435070 | 0.806921 | 6.502546e-50 | -8.615850e-47 |
| Msa0826150 | Msa1435070 | 0.810483 | 1.127028e-50 | -8.615850e-47 |
| Msa0826760 | Msa1435070 | 0.821500 | 3.907271e-53 | -8.615850e-47 |
| Msa0828660 | Msa1435070 | 0.800319 | 1.523627e-48 | -8.615850e-47 |
| Msa0835230 | Msa1435070 | 0.806879 | 6.639538e-50 | -8.615850e-47 |
| Msa0126770 | Msa1435070 | 0.804370 | 2.232013e-49 | -8.615850e-47 |
| Msa0130720 | Msa1435070 | 0.802900 | 4.504020e-49 | -8.615850e-47 |
| Msa0140500 | Msa1435070 | -0.800667 | 1.294327e-48 | -8.615850e-47 |
| Msa0143850 | Msa1435070 | 0.801464 | 8.893153e-49 | -8.615850e-47 |
| Msa0144360 | Msa1435070 | 0.810081 | 1.375929e-50 | -8.615850e-47 |
| Msa0150990 | Msa1435070 | 0.817476 | 3.233700e-52 | -8.615850e-47 |
| Msa0160670 | Msa1435070 | 0.822949 | 1.801657e-53 | -8.615850e-47 |
| Msa0168190 | Msa1435070 | 0.816715 | 4.794211e-52 | -8.615850e-47 |
| Msa0181230 | Msa1435070 | 0.800597 | 1.337497e-48 | -8.615850e-47 |
| Msa0183760 | Msa1435070 | 0.822605 | 2.165698e-53 | -8.615850e-47 |
| Msa0187030 | Msa1435070 | 0.833177 | 6.193274e-56 | -8.615850e-47 |
| Msa0187830 | Msa1435070 | 0.803361 | 3.616443e-49 | -8.615850e-47 |
| Msa0207350 | Msa1435070 | 0.818232 | 2.182681e-52 | -8.615850e-47 |
| Msa0215590 | Msa1435070 | 0.801343 | 9.415038e-49 | -8.615850e-47 |
| Msa0217700 | Msa1435070 | 0.807942 | 3.950468e-50 | -8.615850e-47 |
| Msa0225220 | Msa1435070 | 0.839078 | 1.964754e-57 | -8.615850e-47 |
| Msa0230150 | Msa1435070 | 0.819861 | 9.297460e-53 | -8.615850e-47 |
| Msa0230370 | Msa1435070 | 0.809534 | 1.804611e-50 | -8.615850e-47 |
| Msa0231190 | Msa1435070 | 0.817156 | 3.816743e-52 | -8.615850e-47 |
| Msa1243870 | Msa1435070 | 0.812517 | 4.074135e-51 | -8.615850e-47 |
| Msa1244640 | Msa1435070 | 0.809694 | 1.667529e-50 | -8.615850e-47 |
| Msa1265590 | Msa1435070 | 0.809959 | 1.461863e-50 | -8.615850e-47 |
| Msa1272610 | Msa1435070 | 0.813539 | 2.432400e-51 | -8.615850e-47 |
| Msa1284900 | Msa1435070 | 0.801114 | 1.049005e-48 | -8.615850e-47 |
| Msa1293590 | Msa1435070 | 0.813435 | 2.562964e-51 | -8.615850e-47 |
| Msa0381610 | Msa1435070 | -0.824666 | 7.133223e-54 | -8.615850e-47 |
| Msa0382260 | Msa1435070 | 0.846574 | 1.994606e-59 | -8.615850e-47 |
| Msa0382270 | Msa1435070 | 0.984511 | 8.964407e-161 | -8.615850e-47 |
| Msa0382370 | Msa1435070 | 0.808498 | 3.006634e-50 | -8.615850e-47 |
| Msa0394140 | Msa1435070 | 0.810405 | 1.171858e-50 | -8.615850e-47 |
| Msa0403660 | Msa1435070 | 0.823527 | 1.319993e-53 | -8.615850e-47 |
| Msa0406770 | Msa1435070 | 0.807254 | 5.529697e-50 | -8.615850e-47 |
| Msa0411410 | Msa1435070 | 0.801638 | 8.192646e-49 | -8.615850e-47 |
| Msa0420030 | Msa1435070 | 0.800366 | 1.490702e-48 | -8.615850e-47 |
| Msa0430750 | Msa1435070 | 0.806079 | 9.790998e-50 | -8.615850e-47 |
| Msa0431780 | Msa1435070 | 0.886010 | 4.958148e-72 | -8.615850e-47 |
| Msa0432160 | Msa1435070 | 0.810531 | 1.100519e-50 | -8.615850e-47 |
| Msa0450400 | Msa1435070 | -0.804419 | 2.180022e-49 | -8.615850e-47 |
| Msa0455740 | Msa1435070 | 0.821372 | 4.181601e-53 | -8.615850e-47 |
| Msa0468320 | Msa1435070 | 0.806438 | 8.226469e-50 | -8.615850e-47 |
| Msa0471420 | Msa1435070 | 0.812694 | 3.727647e-51 | -8.615850e-47 |
| Msa0473980 | Msa1435070 | 0.811450 | 6.957362e-51 | -8.615850e-47 |
| Msa0476680 | Msa1435070 | 0.818006 | 2.455052e-52 | -8.615850e-47 |
| Msa0479200 | Msa1435070 | 0.818342 | 2.060548e-52 | -8.615850e-47 |
| Msa0480000 | Msa1435070 | 0.808993 | 2.356858e-50 | -8.615850e-47 |
| Msa0986510 | Msa1435070 | 0.807114 | 5.921368e-50 | -8.615850e-47 |
| Msa1028350 | Msa1435070 | 0.808515 | 2.982537e-50 | -8.615850e-47 |
| Msa1028590 | Msa1435070 | 0.810567 | 1.080833e-50 | -8.615850e-47 |
| Msa1034270 | Msa1435070 | 0.800252 | 1.572230e-48 | -8.615850e-47 |
| Msa1034290 | Msa1435070 | 0.818036 | 2.416409e-52 | -8.615850e-47 |
| Msa1034500 | Msa1435070 | 0.838125 | 3.463552e-57 | -8.615850e-47 |
| Msa1038080 | Msa1435070 | 0.842164 | 3.056999e-58 | -8.615850e-47 |
| Msa1069820 | Msa1435070 | 0.805518 | 1.284028e-49 | -8.615850e-47 |
| Msa1080800 | Msa1435070 | 0.806352 | 8.575688e-50 | -8.615850e-47 |
| Msa1088410 | Msa1435070 | 0.813185 | 2.908940e-51 | -8.615850e-47 |
| Msa1089450 | Msa1435070 | 0.806335 | 8.649384e-50 | -8.615850e-47 |
| Msa1095650 | Msa1435070 | 0.805522 | 1.281654e-49 | -8.615850e-47 |
| Msa1098890 | Msa1435070 | 0.801727 | 7.856922e-49 | -8.615850e-47 |
| Msa0253290 | Msa1435070 | 0.824831 | 6.522178e-54 | -8.615850e-47 |
| Msa0264830 | Msa1435070 | 0.809670 | 1.687395e-50 | -8.615850e-47 |
| Msa0296820 | Msa1435070 | 0.807847 | 4.138017e-50 | -8.615850e-47 |
| Msa0307310 | Msa1435070 | 0.804647 | 1.953973e-49 | -8.615850e-47 |
| Msa0308460 | Msa1435070 | 0.819443 | 1.158356e-52 | -8.615850e-47 |
| Msa0317970 | Msa1435070 | 0.807262 | 5.509347e-50 | -8.615850e-47 |
| Msa0326520 | Msa1435070 | 0.804758 | 1.852490e-49 | -8.615850e-47 |
| Msa0333650 | Msa1435070 | 0.802518 | 5.400045e-49 | -8.615850e-47 |
| Msa0340340 | Msa1435070 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
| Msa0340710 | Msa1435070 | 0.806046 | 9.950517e-50 | -8.615850e-47 |
| Msa0342010 | Msa1435070 | 0.845132 | 4.913546e-59 | -8.615850e-47 |
| Msa0358890 | Msa1435070 | 0.802624 | 5.135920e-49 | -8.615850e-47 |
| Msa0360210 | Msa1435070 | 0.809316 | 2.010011e-50 | -8.615850e-47 |
| Msa1113010 | Msa1435070 | 0.801658 | 8.117435e-49 | -8.615850e-47 |
| Msa1129690 | Msa1435070 | 0.816950 | 4.246626e-52 | -8.615850e-47 |
| Msa1142670 | Msa1435070 | 0.804740 | 1.868638e-49 | -8.615850e-47 |
| Msa1157570 | Msa1435070 | 0.817574 | 3.073005e-52 | -8.615850e-47 |
| Msa1163540 | Msa1435070 | 0.818804 | 1.619259e-52 | -8.615850e-47 |
| Msa1164590 | Msa1435070 | 0.815676 | 8.184098e-52 | -8.615850e-47 |
| Msa1190970 | Msa1435070 | 0.803085 | 4.124507e-49 | -8.615850e-47 |
| Msa1220870 | Msa1435070 | 0.807040 | 6.138103e-50 | -8.615850e-47 |
| Msa1223330 | Msa1435070 | 0.801198 | 1.008016e-48 | -8.615850e-47 |
| Msa0483800 | Msa1435070 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0485240 | Msa1435070 | 0.824437 | 8.077053e-54 | -8.615850e-47 |
| Msa0510290 | Msa1435070 | 0.807085 | 6.004028e-50 | -8.615850e-47 |
| Msa0520710 | Msa1435070 | 0.981727 | 2.685480e-153 | -8.615850e-47 |
| Msa0521010 | Msa1435070 | 0.819014 | 1.450907e-52 | -8.615850e-47 |
| Msa0530100 | Msa1435070 | 0.809246 | 2.079944e-50 | -8.615850e-47 |
| Msa0544660 | Msa1435070 | 0.803984 | 2.685086e-49 | -8.615850e-47 |
| Msa0554380 | Msa1435070 | -0.802604 | 5.184871e-49 | -8.615850e-47 |
| Msa0559500 | Msa1435070 | 0.813020 | 3.161750e-51 | -8.615850e-47 |
| Msa0579660 | Msa1435070 | 0.815262 | 1.011381e-51 | -8.615850e-47 |
| Msa0597000 | Msa1435070 | 0.822314 | 2.530940e-53 | -8.615850e-47 |
| Msa0861830 | Msa1435070 | 0.801230 | 9.931731e-49 | -8.615850e-47 |
| Msa0868160 | Msa1435070 | 0.820458 | 6.786525e-53 | -8.615850e-47 |
| Msa0868440 | Msa1435070 | 0.812094 | 5.039486e-51 | -8.615850e-47 |
| Msa0900620 | Msa1435070 | 0.814359 | 1.604195e-51 | -8.615850e-47 |
| Msa0932350 | Msa1435070 | 0.807627 | 4.609193e-50 | -8.615850e-47 |
| Msa0936390 | Msa1435070 | 0.830204 | 3.350354e-55 | -8.615850e-47 |
| Msa0937020 | Msa1435070 | 0.819290 | 1.255000e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435070 | MtrunA17_Chr3g0136561 | 97.912 | 431 | 9 | 0 | 1 | 431 | 1 | 431 | 0.0 | 871 |
| Msa1435070 | MtrunA17_Chr6g0473071 | 97.680 | 431 | 10 | 0 | 1 | 431 | 8 | 438 | 0.0 | 863 |
| Msa1435070 | MtrunA17_Chr7g0275561 | 34.384 | 349 | 206 | 6 | 60 | 401 | 110 | 442 | 2.48e-50 | 178 |
| Msa1435070 | MtrunA17_Chr6g0462491 | 32.225 | 391 | 244 | 8 | 22 | 397 | 34 | 418 | 3.92e-49 | 173 |
| Msa1435070 | MtrunA17_Chr1g0185761 | 33.237 | 346 | 213 | 6 | 40 | 377 | 39 | 374 | 1.15e-45 | 162 |
| Msa1435070 | MtrunA17_Chr7g0255281 | 34.024 | 338 | 196 | 10 | 90 | 422 | 99 | 414 | 3.82e-45 | 162 |
| Msa1435070 | MtrunA17_Chr1g0161181 | 33.140 | 344 | 212 | 6 | 42 | 377 | 41 | 374 | 1.70e-44 | 159 |
| Msa1435070 | MtrunA17_Chr8g0381061 | 31.962 | 316 | 202 | 7 | 57 | 367 | 58 | 365 | 5.01e-41 | 150 |
| Msa1435070 | MtrunA17_Chr8g0358271 | 31.073 | 354 | 218 | 10 | 33 | 371 | 29 | 371 | 2.24e-39 | 145 |
| Msa1435070 | MtrunA17_Chr7g0268361 | 29.016 | 386 | 238 | 10 | 57 | 424 | 53 | 420 | 1.32e-38 | 144 |
| Msa1435070 | MtrunA17_Chr3g0088781 | 31.765 | 340 | 208 | 8 | 25 | 363 | 14 | 330 | 2.93e-38 | 143 |
| Msa1435070 | MtrunA17_Chr1g0153201 | 30.882 | 340 | 211 | 7 | 25 | 363 | 14 | 330 | 7.01e-38 | 142 |
| Msa1435070 | MtrunA17_Chr3g0115901 | 32.248 | 307 | 193 | 6 | 62 | 363 | 83 | 379 | 4.22e-36 | 137 |
| Msa1435070 | MtrunA17_Chr3g0088811 | 35.714 | 224 | 127 | 5 | 141 | 363 | 23 | 230 | 1.91e-33 | 127 |
| Msa1435070 | MtrunA17_Chr3g0121121 | 31.515 | 330 | 189 | 8 | 58 | 367 | 78 | 390 | 3.74e-33 | 130 |
| Msa1435070 | MtrunA17_Chr2g0311491 | 35.950 | 242 | 142 | 5 | 144 | 377 | 1 | 237 | 4.55e-32 | 124 |
| Msa1435070 | MtrunA17_Chr6g0467331 | 28.895 | 353 | 228 | 9 | 42 | 386 | 36 | 373 | 8.69e-31 | 125 |
| Msa1435070 | MtrunA17_Chr3g0109091 | 27.322 | 366 | 237 | 9 | 22 | 372 | 40 | 391 | 6.48e-30 | 120 |
| Msa1435070 | MtrunA17_Chr7g0220971 | 28.025 | 314 | 215 | 5 | 55 | 367 | 72 | 375 | 3.59e-28 | 115 |
| Msa1435070 | MtrunA17_Chr6g0462481 | 31.707 | 205 | 130 | 4 | 115 | 314 | 17 | 216 | 1.68e-22 | 95.1 |
| Msa1435070 | MtrunA17_Chr8g0389501 | 31.771 | 192 | 113 | 5 | 115 | 297 | 56 | 238 | 2.11e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435070 | AT5G21970.1 | 66.667 | 390 | 121 | 5 | 20 | 408 | 39 | 420 | 0.0 | 521 |
| Msa1435070 | AT5G21970.2 | 66.667 | 390 | 121 | 5 | 20 | 408 | 39 | 420 | 0.0 | 521 |
| Msa1435070 | AT4G01037.1 | 36.504 | 389 | 208 | 9 | 17 | 386 | 56 | 424 | 2.03e-59 | 202 |
| Msa1435070 | AT3G63090.1 | 31.443 | 388 | 245 | 8 | 22 | 402 | 29 | 402 | 2.78e-48 | 170 |
| Msa1435070 | AT4G33495.1 | 33.773 | 379 | 223 | 11 | 25 | 388 | 38 | 403 | 1.91e-47 | 168 |
| Msa1435070 | AT5G48040.1 | 32.295 | 353 | 209 | 8 | 41 | 379 | 44 | 380 | 6.67e-45 | 161 |
| Msa1435070 | AT1G79120.1 | 31.653 | 357 | 222 | 6 | 38 | 382 | 64 | 410 | 4.57e-44 | 159 |
| Msa1435070 | AT1G79120.2 | 31.653 | 357 | 222 | 6 | 38 | 382 | 64 | 410 | 4.57e-44 | 159 |
| Msa1435070 | AT2G31290.1 | 31.285 | 358 | 217 | 7 | 37 | 387 | 29 | 364 | 1.14e-42 | 155 |
| Msa1435070 | AT2G31290.2 | 31.285 | 358 | 217 | 7 | 37 | 387 | 29 | 364 | 1.14e-42 | 155 |
| Msa1435070 | AT5G45790.2 | 31.421 | 366 | 223 | 9 | 17 | 372 | 48 | 395 | 4.27e-41 | 151 |
| Msa1435070 | AT5G45790.1 | 36.082 | 291 | 162 | 7 | 90 | 372 | 36 | 310 | 1.09e-40 | 148 |
| Msa1435070 | AT4G08940.1 | 31.529 | 314 | 194 | 6 | 57 | 363 | 83 | 382 | 1.54e-40 | 149 |
| Msa1435070 | AT5G62990.1 | 35.152 | 330 | 176 | 9 | 58 | 367 | 81 | 392 | 2.39e-40 | 150 |
| Msa1435070 | AT3G58520.1 | 32.827 | 329 | 202 | 8 | 56 | 372 | 55 | 376 | 4.83e-40 | 148 |
| Msa1435070 | AT1G06440.1 | 29.211 | 380 | 240 | 8 | 5 | 367 | 3 | 370 | 1.92e-36 | 138 |
| Msa1435070 | AT3G58520.2 | 34.138 | 290 | 174 | 7 | 95 | 372 | 80 | 364 | 3.98e-36 | 137 |
| Msa1435070 | AT1G71850.1 | 27.157 | 394 | 268 | 7 | 22 | 410 | 17 | 396 | 2.36e-34 | 134 |
| Msa1435070 | AT4G24320.1 | 28.767 | 292 | 195 | 6 | 91 | 375 | 78 | 363 | 2.43e-23 | 101 |
| Msa1435070 | AT2G39120.1 | 27.707 | 314 | 216 | 6 | 55 | 367 | 52 | 355 | 2.97e-23 | 101 |
Find 77 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAACTGGAATAACCATTTC+TGG | 0.211698 | tig0027613:+20870 | None:intergenic |
| AAAAGGGTGCATAGTTATTA+TGG | 0.236478 | tig0027613:-20336 | Msa1435070:CDS |
| TCAGAGATTCTGTGAGGTTT+TGG | 0.253264 | tig0027613:+20813 | None:intergenic |
| CTTAGTCTTGTTGGCTATAG+AGG | 0.357273 | tig0027613:-19976 | Msa1435070:CDS |
| GATTCATAGCAATCGATTCA+TGG | 0.376006 | tig0027613:-21055 | Msa1435070:CDS |
| TTGTTTCTTGGAATTCTGAA+TGG | 0.380201 | tig0027613:-20473 | Msa1435070:CDS |
| ACAGGAAATTTCAAAGGAAA+TGG | 0.381695 | tig0027613:+20366 | None:intergenic |
| GGATGTGGAGCTTGAGCAAC+AGG | 0.382512 | tig0027613:-19860 | Msa1435070:CDS |
| AAAATTGCTGTTATTCGCAT+TGG | 0.392112 | tig0027613:-21028 | Msa1435070:CDS |
| TTCACAAATTCAATGCGGTT+TGG | 0.393479 | tig0027613:-21077 | None:intergenic |
| AGCTCTATAAGGATCGTAAC+GGG | 0.395197 | tig0027613:-20761 | Msa1435070:CDS |
| GAGAAGCTTCTTAGTCTTGT+TGG | 0.399437 | tig0027613:-19985 | Msa1435070:CDS |
| AACAGAAGCTTATGATGGTT+CGG | 0.405777 | tig0027613:-20043 | Msa1435070:CDS |
| AAACCCTTTGCATCAGCATA+AGG | 0.409922 | tig0027613:+20273 | None:intergenic |
| AAGATCGAAGCAAGAAGAAA+AGG | 0.422615 | tig0027613:-20974 | Msa1435070:CDS |
| AAATTGCTGTTATTCGCATT+GGG | 0.423537 | tig0027613:-21027 | Msa1435070:CDS |
| ACTCCCAACGGAAGTGAGTT+AGG | 0.429164 | tig0027613:+20157 | None:intergenic |
| AAGCAAACCCGGGGTGTGTT+CGG | 0.431409 | tig0027613:+20395 | None:intergenic |
| ATGTTTCTGAGAGGGGTAAG+AGG | 0.440704 | tig0027613:-20080 | Msa1435070:CDS |
| AGGATCGTAACGGGGTGTTA+TGG | 0.444477 | tig0027613:-20752 | Msa1435070:CDS |
| TCTCCTTATGCTGATGCAAA+GGG | 0.446830 | tig0027613:-20276 | Msa1435070:CDS |
| TCGAAGCAGCAACAGAGAAA+TGG | 0.448143 | tig0027613:-20941 | Msa1435070:CDS |
| GTTCTTTAGAATTCGATAAG+AGG | 0.449761 | tig0027613:-20242 | Msa1435070:CDS |
| TGATTCTGATGTGGAGGACT+TGG | 0.465301 | tig0027613:-19881 | Msa1435070:CDS |
| GATTCTGAGATGGATGTTAG+AGG | 0.467647 | tig0027613:-19802 | Msa1435070:CDS |
| TCTCGAACAAGAACCAGAAA+TGG | 0.467938 | tig0027613:-20883 | Msa1435070:CDS |
| TGTTTCTTGGAATTCTGAAT+GGG | 0.470467 | tig0027613:-20472 | Msa1435070:CDS |
| CTTCTTCTCAATCTCTGTGA+TGG | 0.477726 | tig0027613:+20449 | None:intergenic |
| TAATGTGAAAGAGATCGAAC+TGG | 0.482436 | tig0027613:+20855 | None:intergenic |
| AGATCGAAGCAAGAAGAAAA+GGG | 0.484434 | tig0027613:-20973 | Msa1435070:CDS |
| GTCTCCTTATGCTGATGCAA+AGG | 0.487202 | tig0027613:-20277 | Msa1435070:CDS |
| GAATAAGACGATTGTGGAAG+GGG | 0.488073 | tig0027613:-20427 | Msa1435070:CDS |
| GAAGAAGAATAAGACGATTG+TGG | 0.490121 | tig0027613:-20433 | Msa1435070:CDS |
| AATGGTAGCGAAAGCAAACC+CGG | 0.509498 | tig0027613:+20384 | None:intergenic |
| AGGAAGGAAGAAGAAGTTTG+AGG | 0.519477 | tig0027613:-19956 | Msa1435070:CDS |
| TCAGAATCGTCCTCGAGTAA+AGG | 0.523469 | tig0027613:+19817 | None:intergenic |
| AAGAATAAGACGATTGTGGA+AGG | 0.524672 | tig0027613:-20429 | Msa1435070:CDS |
| TTCTTTAGAATTCGATAAGA+GGG | 0.527132 | tig0027613:-20241 | Msa1435070:CDS |
| TACTAGGTTGCTTATGATGT+CGG | 0.530829 | tig0027613:-20643 | Msa1435070:CDS |
| GGTTGATAAACGTGTTCAGT+TGG | 0.531073 | tig0027613:-20622 | Msa1435070:CDS |
| GATGCAAAGGGTTTGAAACC+TGG | 0.532506 | tig0027613:-20264 | Msa1435070:CDS |
| AAGCTGCTGAATATGTTACT+AGG | 0.532919 | tig0027613:-20659 | Msa1435070:CDS |
| CAATGAGTTCTAAAATCCAT+TGG | 0.537215 | tig0027613:+20564 | None:intergenic |
| TCACCTAACTCACTTCCGTT+GGG | 0.539444 | tig0027613:-20160 | Msa1435070:CDS |
| AGTGATGAGGAAGGCGGTGA+TGG | 0.540545 | tig0027613:-19922 | Msa1435070:CDS |
| TTTGATGGAAGAACACAAAA+GGG | 0.543427 | tig0027613:-20703 | Msa1435070:CDS |
| ACAGGATACCTTGGAGTACA+AGG | 0.547237 | tig0027613:-19842 | Msa1435070:CDS |
| AACTGAAACCGAACACACCC+CGG | 0.548649 | tig0027613:-20403 | Msa1435070:CDS |
| ATCACCTAACTCACTTCCGT+TGG | 0.553764 | tig0027613:-20161 | Msa1435070:CDS |
| TTATCGAATTCTAAAGAACC+AGG | 0.555066 | tig0027613:+20246 | None:intergenic |
| ACTGAAACCGAACACACCCC+GGG | 0.560385 | tig0027613:-20402 | Msa1435070:CDS |
| GTCTTGTTGGCTATAGAGGA+AGG | 0.560921 | tig0027613:-19972 | Msa1435070:CDS |
| AAATTTACAGGAAATTTCAA+AGG | 0.561249 | tig0027613:+20360 | None:intergenic |
| GCTTGAGCAACAGGATACCT+TGG | 0.563372 | tig0027613:-19851 | Msa1435070:CDS |
| TGATGTGGAGGACTTGGATG+TGG | 0.571180 | tig0027613:-19875 | Msa1435070:CDS |
| ATTCTGAGATGGATGTTAGA+GGG | 0.571949 | tig0027613:-19801 | Msa1435070:CDS |
| AACTCAACATCGTCAAGAGA+AGG | 0.575314 | tig0027613:+20504 | None:intergenic |
| TTATGCCTCAGAAGTTGATG+AGG | 0.583152 | tig0027613:-20131 | Msa1435070:CDS |
| ACTCGAGGACGATTCTGAGA+TGG | 0.584295 | tig0027613:-19812 | Msa1435070:CDS |
| AGAATAAGACGATTGTGGAA+GGG | 0.588082 | tig0027613:-20428 | Msa1435070:CDS |
| GCTTCAGAGTGATTCTGATG+TGG | 0.588652 | tig0027613:-19890 | Msa1435070:CDS |
| CGTAACGGGGTGTTATGGTG+TGG | 0.588860 | tig0027613:-20747 | Msa1435070:CDS |
| GGCGGATAGTGATAGTGATG+AGG | 0.590246 | tig0027613:-19935 | Msa1435070:CDS |
| GAGCTCTATAAGGATCGTAA+CGG | 0.593963 | tig0027613:-20762 | Msa1435070:CDS |
| TAAAGGATCCTTGTACTCCA+AGG | 0.600584 | tig0027613:+19834 | None:intergenic |
| AAGGAAGAAGAAGTTTGAGG+CGG | 0.603463 | tig0027613:-19953 | Msa1435070:CDS |
| TCAGAGTGATTCTGATGTGG+AGG | 0.607726 | tig0027613:-19887 | Msa1435070:CDS |
| AAAAGCCTCATCAACTTCTG+AGG | 0.608858 | tig0027613:+20126 | None:intergenic |
| GTTATTCGCATTGGGAACGA+TGG | 0.640658 | tig0027613:-21019 | Msa1435070:CDS |
| AGTGATAGTGATGAGGAAGG+CGG | 0.642676 | tig0027613:-19928 | Msa1435070:CDS |
| GATAGTGATAGTGATGAGGA+AGG | 0.653348 | tig0027613:-19931 | Msa1435070:CDS |
| GAGGCATAACTAACTCCCAA+CGG | 0.662694 | tig0027613:+20145 | None:intergenic |
| ATGGTAGCGAAAGCAAACCC+GGG | 0.662877 | tig0027613:+20385 | None:intergenic |
| GTACAAGGATCCTTTACTCG+AGG | 0.671532 | tig0027613:-19827 | Msa1435070:CDS |
| GCTCTATAAGGATCGTAACG+GGG | 0.700866 | tig0027613:-20760 | Msa1435070:CDS |
| AGAAAATCAGAGATTCTGTG+AGG | 0.714200 | tig0027613:+20807 | None:intergenic |
| TGGTAGCGAAAGCAAACCCG+GGG | 0.722533 | tig0027613:+20386 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTCCTGTAAATTTTAAA+AGG | - | tig0027613:20504-20523 | Msa1435070:CDS | 15.0% |
| !!! | ATTTCCTGTAAATTTTAAAA+GGG | - | tig0027613:20505-20524 | Msa1435070:CDS | 15.0% |
| !!! | AATTTCCTGTAAATTTTAAA+AGG | - | tig0027613:20504-20523 | Msa1435070:CDS | 15.0% |
| !!! | ATTTCCTGTAAATTTTAAAA+GGG | - | tig0027613:20505-20524 | Msa1435070:CDS | 15.0% |
| !! | AAATTTACAGGAAATTTCAA+AGG | + | tig0027613:20500-20519 | None:intergenic | 20.0% |
| !! | TGAAAAGATAAAAATGTTTC+AGG | - | tig0027613:20544-20563 | Msa1435070:CDS | 20.0% |
| !!! | TATTTTTTATGTTTCTGAGA+GGG | - | tig0027613:20769-20788 | Msa1435070:CDS | 20.0% |
| !! | AAATTTACAGGAAATTTCAA+AGG | + | tig0027613:20500-20519 | None:intergenic | 20.0% |
| !! | TGAAAAGATAAAAATGTTTC+AGG | - | tig0027613:20544-20563 | Msa1435070:CDS | 20.0% |
| !!! | TATTTTTTATGTTTCTGAGA+GGG | - | tig0027613:20769-20788 | Msa1435070:CDS | 20.0% |
| ! | TATAGAGCTCAAAAAGTTTA+GGG | + | tig0027613:20085-20104 | None:intergenic | 25.0% |
| ! | TTATAGAGCTCAAAAAGTTT+AGG | + | tig0027613:20086-20105 | None:intergenic | 25.0% |
| !!! | TAAACTTTTTGAGCTCTATA+AGG | - | tig0027613:20085-20104 | Msa1435070:CDS | 25.0% |
| !!! | AATGGATTTTAGAACTCATT+GGG | - | tig0027613:20295-20314 | Msa1435070:CDS | 25.0% |
| !!! | TTCTTTAGAATTCGATAAGA+GGG | - | tig0027613:20616-20635 | Msa1435070:CDS | 25.0% |
| !!! | GTATTTTTTATGTTTCTGAG+AGG | - | tig0027613:20768-20787 | Msa1435070:CDS | 25.0% |
| !!! | ATTTTTTATGTTTCTGAGAG+GGG | - | tig0027613:20770-20789 | Msa1435070:CDS | 25.0% |
| !! | TTTTTAACAGAAGCTTATGA+TGG | - | tig0027613:20809-20828 | Msa1435070:CDS | 25.0% |
| !!! | AGAAATCTCCTTTGTTTTTA+TGG | - | tig0027613:20846-20865 | Msa1435070:CDS | 25.0% |
| ! | TATAGAGCTCAAAAAGTTTA+GGG | + | tig0027613:20085-20104 | None:intergenic | 25.0% |
| ! | TTATAGAGCTCAAAAAGTTT+AGG | + | tig0027613:20086-20105 | None:intergenic | 25.0% |
| !!! | TAAACTTTTTGAGCTCTATA+AGG | - | tig0027613:20085-20104 | Msa1435070:CDS | 25.0% |
| !!! | AATGGATTTTAGAACTCATT+GGG | - | tig0027613:20295-20314 | Msa1435070:CDS | 25.0% |
| !!! | TTCTTTAGAATTCGATAAGA+GGG | - | tig0027613:20616-20635 | Msa1435070:CDS | 25.0% |
| !!! | GTATTTTTTATGTTTCTGAG+AGG | - | tig0027613:20768-20787 | Msa1435070:CDS | 25.0% |
| !!! | ATTTTTTATGTTTCTGAGAG+GGG | - | tig0027613:20770-20789 | Msa1435070:CDS | 25.0% |
| !! | TTTTTAACAGAAGCTTATGA+TGG | - | tig0027613:20809-20828 | Msa1435070:CDS | 25.0% |
| !!! | AGAAATCTCCTTTGTTTTTA+TGG | - | tig0027613:20846-20865 | Msa1435070:CDS | 25.0% |
| ! | AAAATTGCTGTTATTCGCAT+TGG | - | tig0027613:19829-19848 | Msa1435070:CDS | 30.0% |
| ! | AAATTGCTGTTATTCGCATT+GGG | - | tig0027613:19830-19849 | Msa1435070:CDS | 30.0% |
| ATAGAGCTCAAAAAGTTTAG+GGG | + | tig0027613:20084-20103 | None:intergenic | 30.0% | |
| ! | TTTTGATGGAAGAACACAAA+AGG | - | tig0027613:20153-20172 | Msa1435070:CDS | 30.0% |
| TTTGATGGAAGAACACAAAA+GGG | - | tig0027613:20154-20173 | Msa1435070:CDS | 30.0% | |
| !! | CAATGAGTTCTAAAATCCAT+TGG | + | tig0027613:20296-20315 | None:intergenic | 30.0% |
| !!! | CAATGGATTTTAGAACTCAT+TGG | - | tig0027613:20294-20313 | Msa1435070:CDS | 30.0% |
| ! | TTGTTTCTTGGAATTCTGAA+TGG | - | tig0027613:20384-20403 | Msa1435070:CDS | 30.0% |
| TGTTTCTTGGAATTCTGAAT+GGG | - | tig0027613:20385-20404 | Msa1435070:CDS | 30.0% | |
| ACAGGAAATTTCAAAGGAAA+TGG | + | tig0027613:20494-20513 | None:intergenic | 30.0% | |
| !!! | TGCACCCTTTTAAAATTTAC+AGG | + | tig0027613:20512-20531 | None:intergenic | 30.0% |
| ! | AAAAGGGTGCATAGTTATTA+TGG | - | tig0027613:20521-20540 | Msa1435070:CDS | 30.0% |
| AGATAAAAATGTTTCAGGAG+AGG | - | tig0027613:20549-20568 | Msa1435070:CDS | 30.0% | |
| ! | TTATCGAATTCTAAAGAACC+AGG | + | tig0027613:20614-20633 | None:intergenic | 30.0% |
| !! | GTTCTTTAGAATTCGATAAG+AGG | - | tig0027613:20615-20634 | Msa1435070:CDS | 30.0% |
| !!! | TTAGTTTTACAGTTGAGAAG+AGG | - | tig0027613:20663-20682 | Msa1435070:CDS | 30.0% |
| !!! | AATCTCCTTTGTTTTTATGG+AGG | - | tig0027613:20849-20868 | Msa1435070:CDS | 30.0% |
| !!! | ATCTCCTTTGTTTTTATGGA+GGG | - | tig0027613:20850-20869 | Msa1435070:CDS | 30.0% |
| ! | AAAATTGCTGTTATTCGCAT+TGG | - | tig0027613:19829-19848 | Msa1435070:CDS | 30.0% |
| ! | AAATTGCTGTTATTCGCATT+GGG | - | tig0027613:19830-19849 | Msa1435070:CDS | 30.0% |
| ATAGAGCTCAAAAAGTTTAG+GGG | + | tig0027613:20084-20103 | None:intergenic | 30.0% | |
| ! | TTTTGATGGAAGAACACAAA+AGG | - | tig0027613:20153-20172 | Msa1435070:CDS | 30.0% |
| TTTGATGGAAGAACACAAAA+GGG | - | tig0027613:20154-20173 | Msa1435070:CDS | 30.0% | |
| !! | CAATGAGTTCTAAAATCCAT+TGG | + | tig0027613:20296-20315 | None:intergenic | 30.0% |
| !!! | CAATGGATTTTAGAACTCAT+TGG | - | tig0027613:20294-20313 | Msa1435070:CDS | 30.0% |
| ! | TTGTTTCTTGGAATTCTGAA+TGG | - | tig0027613:20384-20403 | Msa1435070:CDS | 30.0% |
| TGTTTCTTGGAATTCTGAAT+GGG | - | tig0027613:20385-20404 | Msa1435070:CDS | 30.0% | |
| ACAGGAAATTTCAAAGGAAA+TGG | + | tig0027613:20494-20513 | None:intergenic | 30.0% | |
| !!! | TGCACCCTTTTAAAATTTAC+AGG | + | tig0027613:20512-20531 | None:intergenic | 30.0% |
| ! | AAAAGGGTGCATAGTTATTA+TGG | - | tig0027613:20521-20540 | Msa1435070:CDS | 30.0% |
| AGATAAAAATGTTTCAGGAG+AGG | - | tig0027613:20549-20568 | Msa1435070:CDS | 30.0% | |
| ! | TTATCGAATTCTAAAGAACC+AGG | + | tig0027613:20614-20633 | None:intergenic | 30.0% |
| !! | GTTCTTTAGAATTCGATAAG+AGG | - | tig0027613:20615-20634 | Msa1435070:CDS | 30.0% |
| !!! | TTAGTTTTACAGTTGAGAAG+AGG | - | tig0027613:20663-20682 | Msa1435070:CDS | 30.0% |
| !!! | AATCTCCTTTGTTTTTATGG+AGG | - | tig0027613:20849-20868 | Msa1435070:CDS | 30.0% |
| !!! | ATCTCCTTTGTTTTTATGGA+GGG | - | tig0027613:20850-20869 | Msa1435070:CDS | 30.0% |
| ! | GATTCATAGCAATCGATTCA+TGG | - | tig0027613:19802-19821 | Msa1435070:CDS | 35.0% |
| AAGATCGAAGCAAGAAGAAA+AGG | - | tig0027613:19883-19902 | Msa1435070:CDS | 35.0% | |
| AGATCGAAGCAAGAAGAAAA+GGG | - | tig0027613:19884-19903 | Msa1435070:CDS | 35.0% | |
| TAATGTGAAAGAGATCGAAC+TGG | + | tig0027613:20005-20024 | None:intergenic | 35.0% | |
| AGAAAATCAGAGATTCTGTG+AGG | + | tig0027613:20053-20072 | None:intergenic | 35.0% | |
| !! | GCAAAAAGCTGAAGTTTTGA+TGG | - | tig0027613:20139-20158 | Msa1435070:CDS | 35.0% |
| AAGCTGCTGAATATGTTACT+AGG | - | tig0027613:20198-20217 | Msa1435070:CDS | 35.0% | |
| TACTAGGTTGCTTATGATGT+CGG | - | tig0027613:20214-20233 | Msa1435070:CDS | 35.0% | |
| !!! | AAGAGATTTTGGTTTGCCAA+TGG | - | tig0027613:20277-20296 | Msa1435070:CDS | 35.0% |
| ! | TCTTGACGATGTTGAGTTTT+TGG | - | tig0027613:20358-20377 | Msa1435070:CDS | 35.0% |
| !!! | AGTTTTTGGAGCTTGTTTCT+TGG | - | tig0027613:20372-20391 | Msa1435070:CDS | 35.0% |
| GAAGAAGAATAAGACGATTG+TGG | - | tig0027613:20424-20443 | Msa1435070:CDS | 35.0% | |
| AAGAATAAGACGATTGTGGA+AGG | - | tig0027613:20428-20447 | Msa1435070:CDS | 35.0% | |
| AGAATAAGACGATTGTGGAA+GGG | - | tig0027613:20429-20448 | Msa1435070:CDS | 35.0% | |
| ! | TTTTACAGTTGAGAAGAGGT+TGG | - | tig0027613:20667-20686 | Msa1435070:CDS | 35.0% |
| ! | AGGCTTTTGCTTAAACATTG+TGG | - | tig0027613:20746-20765 | Msa1435070:CDS | 35.0% |
| AACAGAAGCTTATGATGGTT+CGG | - | tig0027613:20814-20833 | Msa1435070:CDS | 35.0% | |
| TTCTCCCTCCATAAAAACAA+AGG | + | tig0027613:20857-20876 | None:intergenic | 35.0% | |
| !! | ATTCTGAGATGGATGTTAGA+GGG | - | tig0027613:21056-21075 | Msa1435070:CDS | 35.0% |
| ! | GATTCATAGCAATCGATTCA+TGG | - | tig0027613:19802-19821 | Msa1435070:CDS | 35.0% |
| AAGATCGAAGCAAGAAGAAA+AGG | - | tig0027613:19883-19902 | Msa1435070:CDS | 35.0% | |
| AGATCGAAGCAAGAAGAAAA+GGG | - | tig0027613:19884-19903 | Msa1435070:CDS | 35.0% | |
| TAATGTGAAAGAGATCGAAC+TGG | + | tig0027613:20005-20024 | None:intergenic | 35.0% | |
| AGAAAATCAGAGATTCTGTG+AGG | + | tig0027613:20053-20072 | None:intergenic | 35.0% | |
| !! | GCAAAAAGCTGAAGTTTTGA+TGG | - | tig0027613:20139-20158 | Msa1435070:CDS | 35.0% |
| AAGCTGCTGAATATGTTACT+AGG | - | tig0027613:20198-20217 | Msa1435070:CDS | 35.0% | |
| TACTAGGTTGCTTATGATGT+CGG | - | tig0027613:20214-20233 | Msa1435070:CDS | 35.0% | |
| !!! | AAGAGATTTTGGTTTGCCAA+TGG | - | tig0027613:20277-20296 | Msa1435070:CDS | 35.0% |
| ! | TCTTGACGATGTTGAGTTTT+TGG | - | tig0027613:20358-20377 | Msa1435070:CDS | 35.0% |
| !!! | AGTTTTTGGAGCTTGTTTCT+TGG | - | tig0027613:20372-20391 | Msa1435070:CDS | 35.0% |
| GAAGAAGAATAAGACGATTG+TGG | - | tig0027613:20424-20443 | Msa1435070:CDS | 35.0% | |
| AAGAATAAGACGATTGTGGA+AGG | - | tig0027613:20428-20447 | Msa1435070:CDS | 35.0% | |
| AGAATAAGACGATTGTGGAA+GGG | - | tig0027613:20429-20448 | Msa1435070:CDS | 35.0% | |
| ! | TTTTACAGTTGAGAAGAGGT+TGG | - | tig0027613:20667-20686 | Msa1435070:CDS | 35.0% |
| ! | AGGCTTTTGCTTAAACATTG+TGG | - | tig0027613:20746-20765 | Msa1435070:CDS | 35.0% |
| AACAGAAGCTTATGATGGTT+CGG | - | tig0027613:20814-20833 | Msa1435070:CDS | 35.0% | |
| TTCTCCCTCCATAAAAACAA+AGG | + | tig0027613:20857-20876 | None:intergenic | 35.0% | |
| !! | ATTCTGAGATGGATGTTAGA+GGG | - | tig0027613:21056-21075 | Msa1435070:CDS | 35.0% |
| TCTCGAACAAGAACCAGAAA+TGG | - | tig0027613:19974-19993 | Msa1435070:CDS | 40.0% | |
| CGAACTGGAATAACCATTTC+TGG | + | tig0027613:19990-20009 | None:intergenic | 40.0% | |
| !!! | AGATTCTGTGAGGTTTTGGA+AGG | + | tig0027613:20043-20062 | None:intergenic | 40.0% |
| ! | TCAGAGATTCTGTGAGGTTT+TGG | + | tig0027613:20047-20066 | None:intergenic | 40.0% |
| GAGCTCTATAAGGATCGTAA+CGG | - | tig0027613:20095-20114 | Msa1435070:CDS | 40.0% | |
| AGCTCTATAAGGATCGTAAC+GGG | - | tig0027613:20096-20115 | Msa1435070:CDS | 40.0% | |
| !! | GGTTGATAAACGTGTTCAGT+TGG | - | tig0027613:20235-20254 | Msa1435070:CDS | 40.0% |
| ! | GCGCATTTTCGAAGAGATTT+TGG | - | tig0027613:20266-20285 | Msa1435070:CDS | 40.0% |
| !!! | GTATCCTCAACTTTTTCGTG+TGG | - | tig0027613:20325-20344 | Msa1435070:CDS | 40.0% |
| TTCACCACACGAAAAAGTTG+AGG | + | tig0027613:20332-20351 | None:intergenic | 40.0% | |
| AACTCAACATCGTCAAGAGA+AGG | + | tig0027613:20356-20375 | None:intergenic | 40.0% | |
| CTTCTTCTCAATCTCTGTGA+TGG | + | tig0027613:20411-20430 | None:intergenic | 40.0% | |
| GAATAAGACGATTGTGGAAG+GGG | - | tig0027613:20430-20449 | Msa1435070:CDS | 40.0% | |
| TCTCCTTATGCTGATGCAAA+GGG | - | tig0027613:20581-20600 | Msa1435070:CDS | 40.0% | |
| AAACCCTTTGCATCAGCATA+AGG | + | tig0027613:20587-20606 | None:intergenic | 40.0% | |
| !! | TTATGCCTCAGAAGTTGATG+AGG | - | tig0027613:20726-20745 | Msa1435070:CDS | 40.0% |
| AAAAGCCTCATCAACTTCTG+AGG | + | tig0027613:20734-20753 | None:intergenic | 40.0% | |
| !! | GAGAAGCTTCTTAGTCTTGT+TGG | - | tig0027613:20872-20891 | Msa1435070:CDS | 40.0% |
| !! | CTTAGTCTTGTTGGCTATAG+AGG | - | tig0027613:20881-20900 | Msa1435070:CDS | 40.0% |
| AGGAAGGAAGAAGAAGTTTG+AGG | - | tig0027613:20901-20920 | Msa1435070:CDS | 40.0% | |
| AAGGAAGAAGAAGTTTGAGG+CGG | - | tig0027613:20904-20923 | Msa1435070:CDS | 40.0% | |
| ! | GATAGTGATAGTGATGAGGA+AGG | - | tig0027613:20926-20945 | Msa1435070:CDS | 40.0% |
| TAAAGGATCCTTGTACTCCA+AGG | + | tig0027613:21026-21045 | None:intergenic | 40.0% | |
| !! | GATTCTGAGATGGATGTTAG+AGG | - | tig0027613:21055-21074 | Msa1435070:CDS | 40.0% |
| TCTCGAACAAGAACCAGAAA+TGG | - | tig0027613:19974-19993 | Msa1435070:CDS | 40.0% | |
| CGAACTGGAATAACCATTTC+TGG | + | tig0027613:19990-20009 | None:intergenic | 40.0% | |
| !!! | AGATTCTGTGAGGTTTTGGA+AGG | + | tig0027613:20043-20062 | None:intergenic | 40.0% |
| ! | TCAGAGATTCTGTGAGGTTT+TGG | + | tig0027613:20047-20066 | None:intergenic | 40.0% |
| GAGCTCTATAAGGATCGTAA+CGG | - | tig0027613:20095-20114 | Msa1435070:CDS | 40.0% | |
| AGCTCTATAAGGATCGTAAC+GGG | - | tig0027613:20096-20115 | Msa1435070:CDS | 40.0% | |
| !! | GGTTGATAAACGTGTTCAGT+TGG | - | tig0027613:20235-20254 | Msa1435070:CDS | 40.0% |
| ! | GCGCATTTTCGAAGAGATTT+TGG | - | tig0027613:20266-20285 | Msa1435070:CDS | 40.0% |
| !!! | GTATCCTCAACTTTTTCGTG+TGG | - | tig0027613:20325-20344 | Msa1435070:CDS | 40.0% |
| TTCACCACACGAAAAAGTTG+AGG | + | tig0027613:20332-20351 | None:intergenic | 40.0% | |
| AACTCAACATCGTCAAGAGA+AGG | + | tig0027613:20356-20375 | None:intergenic | 40.0% | |
| CTTCTTCTCAATCTCTGTGA+TGG | + | tig0027613:20411-20430 | None:intergenic | 40.0% | |
| GAATAAGACGATTGTGGAAG+GGG | - | tig0027613:20430-20449 | Msa1435070:CDS | 40.0% | |
| TCTCCTTATGCTGATGCAAA+GGG | - | tig0027613:20581-20600 | Msa1435070:CDS | 40.0% | |
| AAACCCTTTGCATCAGCATA+AGG | + | tig0027613:20587-20606 | None:intergenic | 40.0% | |
| !! | TTATGCCTCAGAAGTTGATG+AGG | - | tig0027613:20726-20745 | Msa1435070:CDS | 40.0% |
| AAAAGCCTCATCAACTTCTG+AGG | + | tig0027613:20734-20753 | None:intergenic | 40.0% | |
| !! | GAGAAGCTTCTTAGTCTTGT+TGG | - | tig0027613:20872-20891 | Msa1435070:CDS | 40.0% |
| !! | CTTAGTCTTGTTGGCTATAG+AGG | - | tig0027613:20881-20900 | Msa1435070:CDS | 40.0% |
| AGGAAGGAAGAAGAAGTTTG+AGG | - | tig0027613:20901-20920 | Msa1435070:CDS | 40.0% | |
| AAGGAAGAAGAAGTTTGAGG+CGG | - | tig0027613:20904-20923 | Msa1435070:CDS | 40.0% | |
| ! | GATAGTGATAGTGATGAGGA+AGG | - | tig0027613:20926-20945 | Msa1435070:CDS | 40.0% |
| TAAAGGATCCTTGTACTCCA+AGG | + | tig0027613:21026-21045 | None:intergenic | 40.0% | |
| !! | GATTCTGAGATGGATGTTAG+AGG | - | tig0027613:21055-21074 | Msa1435070:CDS | 40.0% |
| GTTATTCGCATTGGGAACGA+TGG | - | tig0027613:19838-19857 | Msa1435070:CDS | 45.0% | |
| TCGAAGCAGCAACAGAGAAA+TGG | - | tig0027613:19916-19935 | Msa1435070:CDS | 45.0% | |
| GCTCTATAAGGATCGTAACG+GGG | - | tig0027613:20097-20116 | Msa1435070:CDS | 45.0% | |
| ! | AATGGTAGCGAAAGCAAACC+CGG | + | tig0027613:20476-20495 | None:intergenic | 45.0% |
| GTCTCCTTATGCTGATGCAA+AGG | - | tig0027613:20580-20599 | Msa1435070:CDS | 45.0% | |
| ! | GATGCAAAGGGTTTGAAACC+TGG | - | tig0027613:20593-20612 | Msa1435070:CDS | 45.0% |
| ATCACCTAACTCACTTCCGT+TGG | - | tig0027613:20696-20715 | Msa1435070:CDS | 45.0% | |
| TCACCTAACTCACTTCCGTT+GGG | - | tig0027613:20697-20716 | Msa1435070:CDS | 45.0% | |
| GAGGCATAACTAACTCCCAA+CGG | + | tig0027613:20715-20734 | None:intergenic | 45.0% | |
| ! | ATGTTTCTGAGAGGGGTAAG+AGG | - | tig0027613:20777-20796 | Msa1435070:CDS | 45.0% |
| ! | GTCTTGTTGGCTATAGAGGA+AGG | - | tig0027613:20885-20904 | Msa1435070:CDS | 45.0% |
| ! | AGTGATAGTGATGAGGAAGG+CGG | - | tig0027613:20929-20948 | Msa1435070:CDS | 45.0% |
| GCTTCAGAGTGATTCTGATG+TGG | - | tig0027613:20967-20986 | Msa1435070:CDS | 45.0% | |
| TCAGAGTGATTCTGATGTGG+AGG | - | tig0027613:20970-20989 | Msa1435070:CDS | 45.0% | |
| TGATTCTGATGTGGAGGACT+TGG | - | tig0027613:20976-20995 | Msa1435070:CDS | 45.0% | |
| ACAGGATACCTTGGAGTACA+AGG | - | tig0027613:21015-21034 | Msa1435070:CDS | 45.0% | |
| GTACAAGGATCCTTTACTCG+AGG | - | tig0027613:21030-21049 | Msa1435070:CDS | 45.0% | |
| TCAGAATCGTCCTCGAGTAA+AGG | + | tig0027613:21043-21062 | None:intergenic | 45.0% | |
| GTTATTCGCATTGGGAACGA+TGG | - | tig0027613:19838-19857 | Msa1435070:CDS | 45.0% | |
| TCGAAGCAGCAACAGAGAAA+TGG | - | tig0027613:19916-19935 | Msa1435070:CDS | 45.0% | |
| GCTCTATAAGGATCGTAACG+GGG | - | tig0027613:20097-20116 | Msa1435070:CDS | 45.0% | |
| ! | AATGGTAGCGAAAGCAAACC+CGG | + | tig0027613:20476-20495 | None:intergenic | 45.0% |
| GTCTCCTTATGCTGATGCAA+AGG | - | tig0027613:20580-20599 | Msa1435070:CDS | 45.0% | |
| ! | GATGCAAAGGGTTTGAAACC+TGG | - | tig0027613:20593-20612 | Msa1435070:CDS | 45.0% |
| ATCACCTAACTCACTTCCGT+TGG | - | tig0027613:20696-20715 | Msa1435070:CDS | 45.0% | |
| TCACCTAACTCACTTCCGTT+GGG | - | tig0027613:20697-20716 | Msa1435070:CDS | 45.0% | |
| GAGGCATAACTAACTCCCAA+CGG | + | tig0027613:20715-20734 | None:intergenic | 45.0% | |
| ! | ATGTTTCTGAGAGGGGTAAG+AGG | - | tig0027613:20777-20796 | Msa1435070:CDS | 45.0% |
| ! | GTCTTGTTGGCTATAGAGGA+AGG | - | tig0027613:20885-20904 | Msa1435070:CDS | 45.0% |
| ! | AGTGATAGTGATGAGGAAGG+CGG | - | tig0027613:20929-20948 | Msa1435070:CDS | 45.0% |
| GCTTCAGAGTGATTCTGATG+TGG | - | tig0027613:20967-20986 | Msa1435070:CDS | 45.0% | |
| TCAGAGTGATTCTGATGTGG+AGG | - | tig0027613:20970-20989 | Msa1435070:CDS | 45.0% | |
| TGATTCTGATGTGGAGGACT+TGG | - | tig0027613:20976-20995 | Msa1435070:CDS | 45.0% | |
| ACAGGATACCTTGGAGTACA+AGG | - | tig0027613:21015-21034 | Msa1435070:CDS | 45.0% | |
| GTACAAGGATCCTTTACTCG+AGG | - | tig0027613:21030-21049 | Msa1435070:CDS | 45.0% | |
| TCAGAATCGTCCTCGAGTAA+AGG | + | tig0027613:21043-21062 | None:intergenic | 45.0% | |
| ! | AGGATCGTAACGGGGTGTTA+TGG | - | tig0027613:20105-20124 | Msa1435070:CDS | 50.0% |
| AACTGAAACCGAACACACCC+CGG | - | tig0027613:20454-20473 | Msa1435070:CDS | 50.0% | |
| ! | ATGGTAGCGAAAGCAAACCC+GGG | + | tig0027613:20475-20494 | None:intergenic | 50.0% |
| ACTCCCAACGGAAGTGAGTT+AGG | + | tig0027613:20703-20722 | None:intergenic | 50.0% | |
| ! | GGCGGATAGTGATAGTGATG+AGG | - | tig0027613:20922-20941 | Msa1435070:CDS | 50.0% |
| TGATGTGGAGGACTTGGATG+TGG | - | tig0027613:20982-21001 | Msa1435070:CDS | 50.0% | |
| GCTTGAGCAACAGGATACCT+TGG | - | tig0027613:21006-21025 | Msa1435070:CDS | 50.0% | |
| ! | ACTCGAGGACGATTCTGAGA+TGG | - | tig0027613:21045-21064 | Msa1435070:CDS | 50.0% |
| ! | AGGATCGTAACGGGGTGTTA+TGG | - | tig0027613:20105-20124 | Msa1435070:CDS | 50.0% |
| AACTGAAACCGAACACACCC+CGG | - | tig0027613:20454-20473 | Msa1435070:CDS | 50.0% | |
| ! | ATGGTAGCGAAAGCAAACCC+GGG | + | tig0027613:20475-20494 | None:intergenic | 50.0% |
| ACTCCCAACGGAAGTGAGTT+AGG | + | tig0027613:20703-20722 | None:intergenic | 50.0% | |
| ! | GGCGGATAGTGATAGTGATG+AGG | - | tig0027613:20922-20941 | Msa1435070:CDS | 50.0% |
| TGATGTGGAGGACTTGGATG+TGG | - | tig0027613:20982-21001 | Msa1435070:CDS | 50.0% | |
| GCTTGAGCAACAGGATACCT+TGG | - | tig0027613:21006-21025 | Msa1435070:CDS | 50.0% | |
| ! | ACTCGAGGACGATTCTGAGA+TGG | - | tig0027613:21045-21064 | Msa1435070:CDS | 50.0% |
| ! | CGTAACGGGGTGTTATGGTG+TGG | - | tig0027613:20110-20129 | Msa1435070:CDS | 55.0% |
| ACTGAAACCGAACACACCCC+GGG | - | tig0027613:20455-20474 | Msa1435070:CDS | 55.0% | |
| AAGCAAACCCGGGGTGTGTT+CGG | + | tig0027613:20465-20484 | None:intergenic | 55.0% | |
| ! | TGGTAGCGAAAGCAAACCCG+GGG | + | tig0027613:20474-20493 | None:intergenic | 55.0% |
| AGTGATGAGGAAGGCGGTGA+TGG | - | tig0027613:20935-20954 | Msa1435070:CDS | 55.0% | |
| GGATGTGGAGCTTGAGCAAC+AGG | - | tig0027613:20997-21016 | Msa1435070:CDS | 55.0% | |
| ! | CGTAACGGGGTGTTATGGTG+TGG | - | tig0027613:20110-20129 | Msa1435070:CDS | 55.0% |
| ACTGAAACCGAACACACCCC+GGG | - | tig0027613:20455-20474 | Msa1435070:CDS | 55.0% | |
| AAGCAAACCCGGGGTGTGTT+CGG | + | tig0027613:20465-20484 | None:intergenic | 55.0% | |
| ! | TGGTAGCGAAAGCAAACCCG+GGG | + | tig0027613:20474-20493 | None:intergenic | 55.0% |
| AGTGATGAGGAAGGCGGTGA+TGG | - | tig0027613:20935-20954 | Msa1435070:CDS | 55.0% | |
| GGATGTGGAGCTTGAGCAAC+AGG | - | tig0027613:20997-21016 | Msa1435070:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027613 | gene | 19792 | 21087 | 19792 | ID=Msa1435070;Name=Msa1435070 |
| tig0027613 | mRNA | 19792 | 21087 | 19792 | ID=Msa1435070-mRNA-1;Parent=Msa1435070;Name=Msa1435070-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|431 |
| tig0027613 | exon | 19792 | 21087 | 19792 | ID=Msa1435070-mRNA-1:exon:9500;Parent=Msa1435070-mRNA-1 |
| tig0027613 | CDS | 19792 | 21087 | 19792 | ID=Msa1435070-mRNA-1:cds;Parent=Msa1435070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
